>input_sequence_41705
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---------------------------------------------------------------ATGAGAGTATACTACAT
CTCGGCCTCCTCGTCTCTCTCTCTCCAGGAGGAGGACGACGGACGACCAAATCCCACACATCTCTTCCCCTCTTCTCCAT
CCACCCGAGCTTTTCTCCGAGAAAATCGACGGAAGATATCCC--------------------GATTTCTGGCGCCGTGCT
ACGATAGTTCTTGGGGAGGAGAGAGCTCGAATCTTGTCGATCT-------------------------------------
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------------------------TGGTCCGATGGGTGACGCGTCGACGATTCAACGGCCACCCGGCACTGTCGCCAAGG
TAATC-----TAATCTATCCACGCCTGACTCTTTTTCTGATGCA------CTGCAAGTAGGAGCATATCACTTCGACTTA
TGTTTGATTTCCTAG-----------------------------------TC----------------------------
-------TCTTGCAATTAGCTCTTGCCAATCGCCATACAAGTTAAATTAGACTCGAAAAGTACAAACAAAGCCAGGCAAA
ACACCATATATAATACTCCCTCCGGTCCTTTTTACTCTGCATATTAGGTTTGTCTGAAGTCAATCTCATCCAACTTTGAC
CAAGTTTATATAAAAAATTATAGACATTCACATAACAACACCAATATCATTAGATTCATTTTGGAATATATTTTCATATT
ATATTTATTAGATATTATAGATGCTAATATTTTTTAATATAAATTTGGTCAAACTTAGCAAAGTTTGACTTTCGGCAAAT
CCAATGTGCAGAGTAAAAAGGACCGCAGGGAGTACTAGTAATCATCCTGGACATTTGTCCAGTATTCTCTTGCAATCACC
TCTCTTTTACTGTGGGACAGCTATCC--------AATGAGTTAATTTTGCATGTAAATGGAAATGACCTGTAAAATGGAA
AATGATCTTATCTTC-TCTTCATCAGGGCAATCAAGTTGGAGAGTTGGTGTCGGCTGGATGGACAAACGACAGCCACGAC
ATGTACATAAGCTCCATGGAGGCGTCCTTCGTGCAGCAACTCCGTATACGTAGTAGCCGACAGTTACAGCACTACCACGC
TCACGCTCC------TGGTAGGAGCATCACCCATGTGGGCGGCCATGGGCTCAAAGCCCTCCA------AGAGGGAGCCT
CAGACGAGCTCAGGTCTGAGACGAACGTTTCTCGCTTGCGTGATGTAGGCGTAAGAGGACTGCCCGAGGATCCATGGGCA
AGGCGTTTCAGGCCACACAAAGATTATTCCGGTGTGAACCGTCGTGGTGATGTGGTGTGTGCTTCGGCCGATGACGGTGA
ATCGGGTACTGATACGGTTCACAAGACTTATCGGACATATGGAAGAGAAGTGGGCATTTTTGCTGGCGAAAATCTTGTTG
GGAAAAGCTCAGGTTGTTACACTTTCTTATCTTGTTTGCAGATTGCTTCCTTCTGTATATGTTTTCTTCACTTTGACACA
AGTTCACTACTGTTGTTCAGTGTTCGCTCACTGTTAGTCTGATAGTATGAATTACTCCTAGAAAGTGTCAATTA-ATAAA
AAAGACAA------------------------------------------------------------------------
-----------ATATTTATTACGTCGTAAGTCGATAAATCAAATAATTGTGATCCAAGGAATGATGTAATTTTGCATGCC
AGGCCGCTGGTATTCCTCATGATTTGTGGAAATATTAAATGACTTTATGGAATTGTTTGTCATATAAAGAAGCTATAACT
GAATTGCCTATCTGGTCGACAACCATGTTTGATGCATTGTCTAGAGTTAGCTCTTTAGTAAATAATTGTATTAAACTTCA
CTTTGACAGAAGTTCATAACTGTTATTCAGTGTTCACTATTAGTCTGACAAGCATTTCGTTGCTTCTCTCCAGAAGCCTC
TGGTCAGAATTTTCCTGAAGAAGAGGTTCACTCCATTGCTCAGCCAACCAAATCATGCAAGAAAAGGAGGACTGCCCCTT
CCACCGCTGCAGGTTCTTTCACGTCGATGCTCGAATGCAGCGACGAGCGGTGGTGA------------------------
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>chr4D_1_TraesCS4D01G352000
ATGCCCCCTTTTCATCATCTTCACGTTCTGCCATACGATCCTACCCGACGACGTTGATGTGAGATGGGCCATAGGAAAAG
AAGCACTCGTGATGTGTTTGTTGGGTCACTCGTAATTGATATTAAATCACTAAAATGTGTTTGTCCTCATTGCAACGCAT
GGACAATTAGCTAGTTAAGGGTACAAAGGGTCAGCAACCGTAACTTGATGAATGGAATAATAGGTCAAAATTAAGGACAG
AAAGAAAGACACACGTTCTTTTA----TACTATATAGTACAAATATTGGACCCCGATA-TGTACCAAATGTCAGATTCCA
GGGCGGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAAATATATAAAAGTAA--------------------------------
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--AAAGTAAAACCCAGTTTGGCCAGTTTGTACTATGACTAAAAAAACATAGTTTTGCCTGTGACTAATAAAGCCTAGCAA
ATGTCAAGATGATATACGGTGACTTCGTAAATCTCAAGATGATATACCGACTCAGTCTTTTGGGGATGTTCATAGGAGTA
GGGTGTGTGTGCGCGTCTGTACTGTGCTAAAAATAATA------------------------------------------
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-------GTATAATTGCCGCTGCCATGTTTCGTAGAGTGAAAAAAACGGCCCAGGGCCCGACTTGTCAGGCAGGCAGCCC
CTACAGCCTGCATCCAATCGCGCGAAAATATCTGCGCCCGATATTTTTCCGCCCCCGCGCGGCCACGTCAACATAAAGTA
CGCCTCCTCCCTCAAAAGATAAAAATAAAGTACGCCTCGACGCCCCCCGCGCTGCCCTTTTCTTTCTTCGTCTTCTCCAC
CCT--------------TTGCTCTGCTCTGCTT-GCTGGCGCAGGCCAGATATTTTTCTTCCGATGAGAGTATACTACAT
CTCGGCCTCCTCGTCTCTCTCTCTCCAGGAGGAGGACGACGGACGACCAAATCCCACACATCTCTTCCCCTCTTCTCCAT
CCACCCGAGCTTTTCTCCGAGAAAATCGACGGAAGATATCCC--------------------GATTTCTGGCGCCGTGCT
ACGATAGTTCTTGGGGAGGAGAGAGCTCGAATCTTGTCGATCT-------------------------------------
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------------------------TGGTCCGATGGGTGACGCGTCGACGATTCAACGGCCACCCGGCACTGTCGCCAAGG
TAATC-----TAATCTATCCACGCCTGACTCTTTTTCTGATGCA------CTGCAAGTAGGAGCATATCACTTCGACTTA
TGTTTGATTTCCTAG-----------------------------------TC----------------------------
-------TCTTGCAATTAGCTCTTGCCAATCGCCATACAAGTTAAATTAGACTCGAAAAGTACAAACAAAGCCAGGCAAA
ACACCATATATAATACTCCCTCCGGTCCTTTTTACTCTGCATATTAGGTTTGTCTGAAGTCAATCTCATCCAACTTTGAC
CAAGTTTATATAAAAAATTATAGACATTCACATAACAACACCAATATCATTAGATTCATTTTGGAATATATTTTCATATT
ATATTTATTAGATATTATAGATGCTAATATTTTTTAATATAAATTTGGTCAAACTTAGCAAAGTTTGACTTTCGGCAAAT
CCAATGTGCAGAGTAAAAAGGACCGCAGGGAGTACTAGTAATCATCCTGGACATTTGTCCAGTATTCTCTTGCAATCACC
TCTCTTTTACTGTGGGACAGCTATCC--------AATGAGTTAATTTTGCATGTAAATGGAAATGACCTGTAAAATGGAA
AATGATCTTATCTTC-TCTTCATCAGGGCAATCAAGTTGGAGAGTTGGTGTCGGCTGGATGGACAAACGACAGCCACGAC
ATGTACATAAGCTCCATGGAGGCGTCCTTCGTGCAGCAACTCCGTATACGTAGTAGCCGACAGTTACAGCACTACCACGC
TCACGCTCC------TGGTAGGAGCATCACCCATGTGGGCGGCCATGGGCTCAAAGCCCTCCA------AGAGGGAGCCT
CAGACGAGCTCAGGTCTGAGACGAACGTTTCTCGCTTGCGTGATGTAGGCGTAAGAGGACTGCCCGAGGATCCATGGGCA
AGGCGTTTCAGGCCACACAAAGATTATTCCGGTGTGAACCGTCGTGGTGATGTGGTGTGTGCTTCGGCCGATGACGGTGA
ATCGGGTACTGATACGGTTCACAAGACTTATCGGACATATGGAAGAGAAGTGGGCATTTTTGCTGGCGAAAATCTTGTTG
GGAAAAGCTCAGGTTGTTACACTTTCTTATCTTGTTTGCAGATTGCTTCCTTCTGTATATGTTTTCTTCACTTTGACACA
AGTTCACTACTGTTGTTCAGTGTTCGCTCACTGTTAGTCTGATAGTATGAATTACTCCTAGAAAGTGTCAATTA-ATAAA
AAAGACAA------------------------------------------------------------------------
-----------ATATTTATTACGTCGTAAGTCGATAAATCAAATAATTGTGATCCAAGGAATGATGTAATTTTGCATGCC
AGGCCGCTGGTATTCCTCATGATTTGTGGAAATATTAAATGACTTTATGGAATTGTTTGTCATATAAAGAAGCTATAACT
GAATTGCCTATCTGGTCGACAACCATGTTTGATGCATTGTCTAGAGTTAGCTCTTTAGTAAATAATTGTATTAAACTTCA
CTTTGACAGAAGTTCATAACTGTTATTCAGTGTTCACTATTAGTCTGACAAGCATTTCGTTGCTTCTCTCCAGAAGCCTC
TGGTCAGAATTTTCCTGAAGAAGAGGTTCACTCCATTGCTCAGCCAACCAAATCATGCAAGAAAAGGAGGACTGCCCCTT
CCACCGCTGCAGGTTCTTTCACGTCGATGCTCGAATGCAGCGACGAGCGGTGGTGAAGGCCAATGTATGTTTTCCGAAAC
CCCGAGGAAGCGACGGAAAACTAGTTCTAGAAATTCTTGCTGAAGCAGTTGTGATAGGTGACTGGTGCGGCTGCTAATAT
TTTTAACTCGGCGGATAGCTCTTGATCAGTCTGCTCTTTCGGCGTGAAGAGAAGGCAATTCATTGGTAGTTTGT------
-ATCATCTCTGCAGAGCATCAGGCTCAAGTTTGCAGATCTGCGAGAGTGGAGGTGCGAGTGATGTGATGCCTTGTGTTGG
TGTGTTTCTTCAGCATCTACTGTCTGCAAGTGAATCAATAGAATTTGG---------------------------ATAGT
TCATACTACATGACTGTTGATGCCACATGGATGCAAATCAAACTTGTTTGGTCTGGAGACATTTTTTGCCTGGCAACCTC
TCTGTTTCTTCTTCTGCAGACTGTTGGTTGTGTTGTGCTAAAACTGAAGTATGTTGTGTTTCTGTGAGGTCTTTGTTAAT
TTTTTTTCCTGATGCAGGGCATATCTCATTCAATCCATATATCGAGGTCTTCGCCGAGAATAGCGTTCCGAAGACCGAGC
TCATGAAGCTCGTTTT-ACAAAAAAAATCAAAATGTATATAGAAGATA--------------TTTTTTCCACAAATACAT
ATGCATATTCTTCAAGTATGTATAACATTTCATCAACTAATTTGATTATTTGCATGCTACACAAAAAAAAAACAAATATT
TGGCCCAAATACAACAAAGAAAAGGCCCATTTTAATATGTGTATTTGTCTTTTATGTGTACATCACATATGAATATGTAT
GTTCATGGAATTTTGTACATGCATACTACAAATATATGTCTAC-TGTACACTTTTTTCCAGATTTTTTTGAGGTGTGAAA
AAAGTATTTTCGCTGGAAGAAAATGAATAAAGAGCTCAATGGAGCTTGGCCTCTGCAGGCACTTTTTGGGTCTTAGCCTA
ATTTTGGCATTTTCATCCGGTCCATATATCGGGGATCTTCTCCGCAACAA----ATCAGAAGGCAGATAG
>chr5A_1
ATGCCCCCTTTTCATCATCTTCATGTTCTGCCACACGATCCTACCCGACGACGTTGATGTGAGACAAGCCATAGGAAAAG
AAGCACTCATGATGTGTTTGTTGGGTCACTCGTAATTGGTATTAAATCACTAAAATGTGTT-GTCCTCATTGCAACACAT
GGACAATTAGCTAGTTAAGGGTACATAGGGTCACCAAACGTAACCGGATGAATCGAATAGTAGGTCAAAATTAAGGATAG
AAAGAAAGACACACATTCTTTTATACGTACTATATAGTACAAATGTTGGACCCCCATAATGTTCCAAATGTCAGATTCCT
GGGCAGGCTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAGATAAATCGGAGGTCTGTAAAAATGTGTACTGTTCATATACTGTTTTGGTCTGATTTGTCTTTTTTGCTGA
GAGCTGCACATAAGTCCAAATGTTTTGAAAATTGGGGCGCACCTCACGCATCAAATTGTCCACCACCTCAATTTTTTTCG
GAATTTTTTAAAGTTTTCTGAATTTTTTACGAATTTTTTTTGAACAGGTGCAGATGCACCCGGGCACCGAAACGCCGCAC
TGAAAGTAAAGCCCACTTTGGCCAGTTTGTACTATGAC-AAAAAAGCATAGTTTTGCCTGTGACTAGTAAAGCCTAGCAT
TTGCCCTACCCTAGCCGCCGCCACGCCAGGCGACTAGGGAGGCGATTTTCTTCCTCCGATCTCAGCCGACCAGGGCGTTG
GCCCCCTCTTCCTCCAGTTGCTCTGGCGGCAGGAGGGAGGGGGACCCCGTTCCTCCGCTATGTAGTTAGGTTTTGCATTT
GTAGGTCGTGGTGCGTCGTTGGGGTGGTGGGAGCGACACTCGGACGAATAAATCTGCCTTAGCTTCACTCCCACACCGGC
GGTGCTCTTCATGGCAGCGTCTCGGAGTTGATGTCATCGTGTGATTGCCGATCCTTCAGATCGGCTGTGTTAGGGTTCAT
GGATGGTGTCGGCGAGGCGGCGGCGGCGACTCCATCAGGTGTGTCTCTCCTTATGCTATGTCCCGGATGCTGTGGCGTTG
TCTCCGACGTCATGGTGGAGCGGGAAGGTTTTGTCATCCAGGAGTACACGCAGACGATTGCCTGCGCAAGTGACAGCTGG
AAGATGGTGCATCCCTTGCTGGGTTTGTGGTTGGTGGCTGTCAGTTTTGGTTTCCTCCATCGACGTCGTTGTCGTACGGG
GGTGTCAGATCTAGAGTTCGATGGCGTGTCCGGGAACATGTTGCCCCGGTCTGATTCTCTCAACGGCAATGGTTTTGCTT
CTAGCAAACTACTTTCGAGGTCCGTAAAGCTGATGATCAGCGATGGAGCCGCGTCGAGCTCTGGTGAAGAGGTGATCTGT
TTCCTTTCCCTTTGGTGGCCACTTCGGTGGTGTCAGAGGAGAGGAACAGGCGCTGGTATTTTGCACAGGATTATCCTATC
TTTTCAGTCTTGTAATGTCAGTGCTTACGTGCCTTGTAACCGGATCTTTATTTTATAAATGAGCCACGTATTACCATGCA
AAAAAAAACCTAGCATTTGCCATGTTGTACAAAAAGTTGCCATAGTCCAAAAATAAAGGGTAAAAAGAATGAGAACTAAA
AAATCCCATGCAAACCAAAAATGTGATATTCTTTAAAAAAAATTGCCATGGTCAAAAAGATCTTTGGTTATGCAATGGCA
CAAAAAAGAAAAAAATCATGGCAATTTGCATTGTACGTGGTGGCAAAAAATGTTGAGTAGATTGTATGGTATTTTTACTA
TTGAATACACACACAAAATGTGTATTAAAATTTGCCATCATGTGGAACACAAAAGGTGCACCATATATTGTTTATTTTAT
TAGTAATGTATAATTGCCGCTGCCATGTTTCGTAAAGTGAAAAAAACGGCCCAGGGCCCGACTTGTCAGGCAGGCAGGCC
CTACAGCCTGCATCCAATCGCGCGGAAATATCTGCGCCCGATATTTTTCCGCCCCCGCGCGGCCACGTCAACAAAAAGTA
CGCCTCCTCCCTCAAA-GATGAAATTAAAGTACGCCTCCACGCGCCCTGCGCTGCCCTTTTATTTCTTCTTCTCTGCTCT
CTCTCTCTCTCTCTCTCTCTCTCTGCTTGCTGGCGCTGGTGCAGGCCAGATATTTTTCTTTCGATGAGAGTATG---CAT
CTCGGCCTCCTCGTCTCTATCTCTCCAGGAGGAGGACGACGGACGACCAAATCCCACACATCGCTTCCCCTCTTCTCCAT
CGACTTGAGCTTTTATCTGAGAAAATCGACGGAAGATATCCTGATTTCTACGTCCTTCCCCGGATTTCTGGCGCCGTGCG
ACGATAGTTCTTGCGGAGGAGAGAGCTCAAATCTTGTCGATCTC-TTCGTCCAACCGCTCTTTCCGACCGCCGTCGATTT
CGGTCCGTTTTTCTCATCAAGGGGGGAAAGGAGGTAGGAAGGAAAGGACTGAATCTTTGCTTCCATCCATTTCATCGGAC
ACATAAATATACCCTGCTTCTTCTTGATCGGATGGGGGACTTGTCCACGATTCAACAGCCACCCGGCACTGTCGCCAAGG
TAATC-----TAATCTATCCGTGCCTGAATGTTTTTCTGATTCACTGCAAGTAA---TAGGAGCATATCACTTCGACTTA
TGTTTGATTTCCTAG-----------------------------------TCTCTGATAAATGAAATCCTTGATTAGCTC
AGTATTCTCTTGCAATTAGCTCTTGCCAATCGACATGCAAGTTTAATTCGACTCGAAAAGTACAGACGAAGCCAGGCAAA
AGTACAAG------------------------------------------------------------------------
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-----------------------TCT--------AGTGACTTAATTTTGCATGGAAATGGAAATGACCTGTAAAGTGGAA
AATGATCATATCTTATTCTTCAGCAGGGCGACCAAGTTGGAGAGTTGGTGTCGGCTGGATGGACAAACGACAGCCACAGC
ATGTACATAAGCTCCATGGAGGCCTCCTTTGTGCGGCAACTCCGTG---------GCCAACAGTTACAGCACCACCACGC
TCACGCTCC------TGCTAGGAACATCACCCATGTGGCTGGCCATGGGCTCAAGGCACTCCATGTCCAAGATGGAGCTC
CCAGTGAGCTCATGTCCGAGAGGAACGTCCCTCGCTCGCGTCATGTGGGCGTAAGAGGCCTGCCCGAGGATCCGTGGGCA
AGGCGTTTCAGGCCACCCAGAGATTATTCCGGTGTCAATCGTCGTGGTGATGTGGTGGGTGCTTCGGCCGATGATGGTGA
ATCGGGTACCGAGACGGTTCCGAAGACGGCTCGGATGCATAGAAGAGAAGTGGACATTTGCGCCGGAGAAAATCTTGTTG
GCAAAAGCTCAGGTTGTTACACTTCATTATCTTGTTTGCAGATTGTTTTCTACGGTATGTGTTTTGTTCAGTTTGACAGA
AGTTCAGAATTGCTATGCAGTCTTCACTTACTGTTAGTCTGATATGAATTCAG---------AAGAGTCGACTAAAGAAA
AAAGATAC------------------------------------------------------------------------
-----------ATTGTTATCATGTCATAAGTCGATAAATCCAATAATTGTGATCCAAGGACCGATGTAATTTTGCATGCC
AGGCCGCAGGTATTCGTCATGATAGGTGGAAATAGTAAATGATCTTATGGAATTGTTTGTCATATAAAGCGGCTTTAACT
GAATTGGCTATTTGGTCGACAACCATGTTTGATGCATTGTCTAGAG-TAGCTCTTTAGTAAATAATTACATGGAAATTCA
CTTTGATAGAAGTTCATAACTGTT-----------------AGTCTGACAAGCATTTCGTTCCTTCTCTCCAGAAGCCTC
TGGTCAGAATTTTCTTGAAGACGAGGTTCATTCCATTGCTCAGCCAATCAAATCTTGCAAGAGAAGGAGGACTGCCCCTT
CCACCGCTGCAGATTCTTTCATGTCGATGCTTGAATGCGGCGACGAGCGGTGATGAAGGCCAATATATGTTTACCGAAGC
CCCGGGGAAGCGACGGAAGACTAGTTCTAGAAATTCTTGCTGAAGTAGTTGTGATAAGTAACTGGTGTGGCTGCTAATAT
TTTTAACTCGACGGATAGCTCTTGGTCGGTCTGCTCTTTCAGCGTGAAGAGAAGACAATTCATTGGTAGTTTGT------
-ATCATCTCTGCAGAGCATCAGGCTCAAGTTTGCAGATCTCCGAGAGTTGAGGTG---GTGATGTGATGCCTTGTGATGG
TGTATTTCTTCAGCATCTACTGCCTGCAAGTGAATCAATAGAATTTGG---------------------------ATAGT
TTATACTACATGACTGTTGATGCCACTG---------------TTGTTTGGTCTGGAGACATTTTTTGCCTGGCAATCTC
TCTGTTTCTTCCTCTGCACACTGTTGGTTGTGTTGTGCTAAAACTGGAGTATGTTGTGATTCTGTGAGGTCTTTGTTAAA
AAAAAATCTTGATGCAGGGCATTTCTCATTCAATCCATATATCGAGGTCTTCGCCGAGAATATCGTTGCAAAGACCAAGC
TCATGAAGCTCG-TTT-ACAAAATAAATCAAAATATATATAGAAGTTTCAAAAAATGTCAATTCTTTTCCACAAATACA-
ATGCATATTCTTCAAGTATGTATAAAATTTTATCAACTAATTTGATTATGTGCATGCTACACAAAAAGAAA-CAAATATC
TGGCCCAAATACAACAAAGAAAAGGCCTATTTTAACATGAATTTTTGTCTTTTAGGTGTACATCACATATGAATATG---
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>chr4B_752
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---------------------------------------AAAAAAACGGCCCAGGGCCCGACTTGTCAGGCAG-------
---------GCATCCAATCGCGCGGAAATATCTGCGCCCGATATTTTTGCGGCCCCGCGCGGCCACGTCAACATAAAGTA
CGCCTCCTCCCTCAAA-GATGAAAATAAAGTACGCCTCCACGCCCCCCGCGCTGCCCTTTTCTTTCTTCGTCTTCTCTA-
CCT--------------TCTCTCTGCTCTGCT-CGCTGGCGCAGGCCAGATATTTTTCTTCCGATGAGAGTAC---ACAT
CTCGGCCTCCTCATCTCTATCTCTCCAGGAGGAGGACGACGGACCACCAAATCCCATACATCTCTTCCCCTCTTCTCCGT
CGACCTGCGCTTTTCTCCGAGAAAGTCGGCAGGAGATGTCCTGATTTCTACGTCCTTCTCCGGATTTCTGGTGCCGTGCG
ACGGTAGTTCTTGCGGAGGAGAAAGCTCGAATCTTTGTCGATCTGTTCGTCCAACCGCTCTTTCTGACCACCGTCGATTT
CGGTC-------------------------------------------CTGAATCTTTCTTTCCATCCATTTCATCGGAG
ACATAAACATACACTGCTTCTTCTTGATCCCATGGGGGACGTGTCCACGATTCAACGGCCACCCGGCAGTGTCGCCAAGG
TAATCTAATCTAATCTATCCATGCCTGACTGTTTTTCTGATCCACTGCAACTGCAAGTAGGAGTATATCACTTCGACTTA
TGTTTGATTTACTTGCCTTTGATAAATGAAATTGTTGATTAGCTCAGTATTC----------------------------
-------TCTTGTGATTAGCTGGTGCCAATCGCCATACAAGTTTAATTCGACTCCAAAAGTTCAAGCAAAAT--------
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-------------------------------------------------------------------------AATCACC
TCTCTTTTACTGTAGGATAGCTGTCCAATGCGAAAATGAGTTAATTTTGCATGGAAATGACCTCG---------------
------------TTCTTCTTCAGCAGGGCAATCAAGTTGGAGAGTTCGTGTCGGCTGGATGGACAAACGACAGCCACGAC
ATGTACATAAGCTCCATGGAGGCCTCCTTCATGCAGCAACTCCGTG---------GCCAACAGTTACAGCACCACCACGC
TCACGCTCCTGCTAGTGCTAGGAACGTGACCCATGTGGCCGGCCATGGGCTCAAGGCGCTCCATGTCCAAGATGGAGCTC
CGAATGAGCTCATGTCCGAGAGGAACGTCCCTCGCTCGCGTCATGTGGGCGTAAGAGGCCTGCCCGAGGATCCGTGGGCA
AGGCGTTTCAGGCCACACAAACATTATTCTGGTATGAATCGTCACGGTGATGTGGTGGGTGCTTCGGCCGATGATGGTGA
ATCGGGTACCGATACAGTTCAGAAGACTTATCGGACACATGGAAAAGAAGTGCACAGTTGTGCTGGCGAAAATCTTGTTG
GCAAAAGCTCAGGTTGTTACATTACATTATCTTGTTTGCAGATTGTTTCCTACAGTATGTGTTTTGTTCAGTTTGGCAGA
AGTTCAGAATTGCTATGCAGTGTTCACTTACTGTTAGTCTGATATGAATTCAG---------AAGTGTTGACTT-AGAAA
AAAGATACTCCCTCTGACCCAGAATATAAGAACGTTTTTAACACTAGCATAGTCTTAAAAACGTTCTTATATTTTGGGAC
GGAGGGAGTACATTATTCTCATGTC--AAGTCGATAAATCCAATAATTGTGATCCAAGAAATGATGTAATTTTGCATGCC
GGGGCGCAGGTATTCGTCATTATACGTGGAAATAGTCAATGATTTTATGGAATTGTTTGTCACATAAAGCGGCTATAACT
GAATTGGCTATCTGGTCGACAACCATGTTTAATGCATTGTATATAG-TAGATCTTTAGTAAATAATTATATTAAACTTCA
CTTTGACAGAAGTTCATAACTGTTATTCAGTGTTCACTGCTAGTCTGACAAGCATTTCGTTGCTTCTCTGCAGAAGCCTC
TGGTCAGAATTTTCCTGAAGACGATGTTCATTCCATTGCTCAGCGAATCAAATCATGCAAGAAAAGGAGGACTGCCCCTT
CCACCGCTGCAGGTTCTTTCACGTCGATGCTCGAATGCAGCGATGAGCGGTGGTGAAGGCCAATGTATGTTTTCTGAAGC
CCGGAGGAAGCGACGGAAGACTAGTTGTAGAAATTCTTGCTGAAGCAGTTGTGATAGGTGACTGGTGCGGCTGCTAAATT
TTTTAACTCGGCGGATAGCTCTTGATCGGTCTGCTCTTTCGGCGTGATGGTGGTGATGTGATGATGTGATGTGT------
-------------GAGCATCAGGCTCAAGTTTGCAGATCTGCGAGAGTGGAGGTG---GTGATGTGATGCCTTGTATTGG
TGTATTTCTTCAGCATCTACAGTTTGCAATTGAATCAATAGAATTTGG---------------------------ATAGT
TTATACTACATGACTGTTGATGCCACATGGATGCAAATCAAACTTGTTTGGTCTGGAGACATTTTTTGCCTGGCAATCTC
TCTGTTTCTTCTTCTGCGGACTGTTGGTTGTGTTGTGCTAAAACTAAAGTATGTTGTGTTTCTGTGAGGTCTTTGTTAAA
AATAATTCCTGATGCAGGGCATTTCTCATTCAATCCATATATGAAGGTCTTCGTCCAGAATAGCGTTGCAAAGACCGAGC
TCATGAAGCTCG-TTTTACAAAAATATTCAAGATATACATATAAGTTTAAAAAAATGTCAATTTTTTTCCACAAATATAT
ATGCATATTGTTCAAGTATGTATAAAATTTCATCAACTAATTTGATTATTTGCATGCTACACAAAAAAAAA------ATC
TGGCCCAAAGACAACAAAGGAAAGGCCCATTTTAATATGTGTATTTGTCTTTTATGTGTACATCACATATGAATATGTAT
GTTCACGGAATTTTGTACATGTATACTACAAATATATGTCTACGTGTATACTTTTTTCAAGATTTTTTTGAGGTGTGAAA
AAAATATTTTCACTGGAAGAAAATAAATAAAGAGCTCAATGGAGCTCGACCTCTGCAGGCACTTTTCGGGTCTTAGCCTA
ATTTTGGCATTTTCATCCGGTCCATATATCGT-GATCTTCTCTGCAACAGTGCCATCAGAAGGCAGATA-
>chr5A_2934
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-----------------------GTTCTAGAAATTCTTGCTGAAGCAGTTGTGATAGGTGACTGGTGCGGCTGCTAATCT
TTTTAACTCGTCTGATAGCTCTCGATTGGCCTGTCCTTTCGGCGTGAAGGGAAGACAATTCATTGGTGATTTGTGTCTAG
TATCCTCTCTGCAGAGCATCAGGCTCAAGTTTGCAGATCTGCGAGAGTGGAGGT----GTGATGTGATGCCTTGTGGTGG
TGTATTTCTTCAGCATCTGCTGTCTGCAAGCGAATCAACGGTTCCTTGCCACGGCAAAAATGTATTGGAGAGTTTATACT
TTATACTACATGACTTTTCATGTCACATGGGTGCAAT--AAACTTGTTTGGTTCAGAGACATTTTTTGCTGGGCAATCTC
TCTGTTTCTTCTTCTGCAGAGTGCTGGTTGTGTTGTGCTAAAACTGAAACATGTTGTGTTTTTGTGAGTTCTTTGCCC-T
TTTTTTTTCTGATAAAGGGCATTT-TCATTCAATCTATATATCGAGGTCTTC----------------------------
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>SNPs
-----------------------S---------S------------------------------SSS-------------
--------S-----------------------------S----------------------S--------------S---
-------------------------S-------S---S------SS-------S-----S-----------------S--
--------------S-----------------------------S---------S-------S----------------S
----S----SSS--------------------------------------------------------------------
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-----------------------------SSSSSSSSSSSSSSSSSSS--------------------------------
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----------S----S----------------------S------S--------------------S------------S
S--S-SSSSSSSSSSSSSSSSSSSS-SSSSSSSSS-S-SS-SSSSSSSSSS--SSS-SS-SSSS-SS-SS--SS-SSS-S
-SSSSSSSS-S-S-SSS-SSSSSSS--SSS-SSSSSS-------------------------------------------
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----------------------------------S------------------------------------------S--
------------------------S-------------------------------------------------------
----------------S---S-----------------S--------------------------------------S-S
------------------SS------------S----------------------------------------SSS----
------------------S-------------------------------------------------------------
-S---S-----------------------------------S-------------------------------------S
-------------S------------------------------------------------------------------
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--------------------------S---------S----S---S----------------------------------
---------------------S--------S----------S--------------------------------------
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-------------------------------------------S----S-------------------------------
-SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
-------------S---S----S------------------------------S--------------------S-----
-------S--------------S---------------------------------------------------------
-----------------------S---------------------SSSSSSSSSS---S-------------S-------
-----------------S-----S--------------S---------------S--S--------------S-----SS
-SS-S-------S---S----S------SS------S----S----S-----------S--------------S------
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---------S-----------S---------------S---------------S-----S--------------------
-S----------------------SS-------------------S-----S-S----S------S----S-------S-
------SS-S--S-S-S--------S--S---------------SS-SSSSSSSSSSSSSSS-------S-S----S---
-----S-S------------------------------------------------------------------------
-------------SS----S-S---S--------------S---------------------------------------
-------S-------S-------SS---------S-------S--------------------------SS---------
------S---------------------------------------S--------------------S------------
--------------------------------------SS----------------------------------------
---------------------S--------S----------------S--------------------------------
------------------------------------------------------------------------------S-
------------------S-------------------------------------------------------------
---------------------------S----------------------------------------------------
-------------------------------------------------------SSS----------------------
---S----------------------------------------------------------------------------
-S--------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
----------------------S--------------------------------------------S-S----------
------------S---------------------S----------S-S--------------------------------
-------------------------S---------------------------------------------S-------S
--------------------------------------------------------------------------------
-----S---------------S--------------------------S---------S---------------------
---S-------S------------S---------------------S-S-----------------S-------------
-------------------------------SS---------S------S-------------------S
>forward_2513
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-------------CCCTTTGCTCTGCTCTGCTT-----------------------------------------------
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----------------------------------------------------------------------
>reverse_3870
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-----------------------------TCTCGCTTGCGTGATGTAGG-------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>forward_3727
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---------------------------TTCGTGCAGCAACTCCGTAT---------------------------------
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----------------------------------------------------------------------
>reverse_5348
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-------------------------------------------------------------------CCGAAGACCGAGC
TCATGAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
