Multiple sequence alignment - TraesCS4D01G349300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G349300 chr4D 100.000 2714 0 0 1 2714 502427164 502424451 0.000000e+00 5012.0
1 TraesCS4D01G349300 chr4B 95.416 1309 42 10 545 1841 646819522 646818220 0.000000e+00 2069.0
2 TraesCS4D01G349300 chr4B 89.826 403 30 7 1988 2383 646818143 646817745 8.670000e-140 507.0
3 TraesCS4D01G349300 chr4B 88.679 318 29 1 2397 2714 646817593 646817283 5.480000e-102 381.0
4 TraesCS4D01G349300 chr5A 96.145 1245 39 5 593 1829 685581932 685580689 0.000000e+00 2025.0
5 TraesCS4D01G349300 chr5A 90.571 350 22 8 2029 2370 685579922 685579576 1.150000e-123 453.0
6 TraesCS4D01G349300 chr5A 94.502 291 16 0 114 404 685591067 685590777 1.480000e-122 449.0
7 TraesCS4D01G349300 chr5A 86.719 384 21 17 1821 2199 685580277 685579919 1.510000e-107 399.0
8 TraesCS4D01G349300 chr5A 95.028 181 8 1 419 599 685582326 685582147 1.590000e-72 283.0
9 TraesCS4D01G349300 chr5A 94.872 39 2 0 2397 2435 685579387 685579349 8.110000e-06 62.1
10 TraesCS4D01G349300 chr1B 92.000 50 2 2 1307 1355 670034608 670034656 4.850000e-08 69.4
11 TraesCS4D01G349300 chr1B 92.000 50 2 2 1307 1355 670167353 670167305 4.850000e-08 69.4
12 TraesCS4D01G349300 chr1D 86.885 61 6 2 1307 1366 481466542 481466483 1.740000e-07 67.6
13 TraesCS4D01G349300 chr1D 89.796 49 3 2 1307 1354 481498625 481498672 8.110000e-06 62.1
14 TraesCS4D01G349300 chr1A 86.207 58 6 2 1307 1363 578196816 578196872 8.110000e-06 62.1
15 TraesCS4D01G349300 chr7B 91.111 45 2 2 2354 2396 23929575 23929619 2.920000e-05 60.2
16 TraesCS4D01G349300 chr3D 83.051 59 10 0 49 107 592823505 592823563 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G349300 chr4D 502424451 502427164 2713 True 5012.000000 5012 100.000 1 2714 1 chr4D.!!$R1 2713
1 TraesCS4D01G349300 chr4B 646817283 646819522 2239 True 985.666667 2069 91.307 545 2714 3 chr4B.!!$R1 2169
2 TraesCS4D01G349300 chr5A 685579349 685582326 2977 True 644.420000 2025 92.667 419 2435 5 chr5A.!!$R2 2016

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
330 331 0.036732 TGGCTGGTTCTTACTGGCTG 59.963 55.0 0.0 0.0 0.0 4.85 F
1041 1278 0.033991 TCGTTCTCCTCCTCCTCCTG 60.034 60.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1473 1710 2.799371 GAGAGGTACGCCGTCCTG 59.201 66.667 11.99 0.0 40.50 3.86 R
2695 3751 1.206578 ATCAAAACGAACGCGCCTG 59.793 52.632 5.73 0.0 42.48 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.815478 CCTCTGTGGTATCTTTCTCGC 58.185 52.381 0.00 0.00 0.00 5.03
24 25 2.166459 CCTCTGTGGTATCTTTCTCGCA 59.834 50.000 0.00 0.00 0.00 5.10
25 26 3.181471 CCTCTGTGGTATCTTTCTCGCAT 60.181 47.826 0.00 0.00 0.00 4.73
26 27 4.046938 TCTGTGGTATCTTTCTCGCATC 57.953 45.455 0.00 0.00 0.00 3.91
27 28 3.126831 CTGTGGTATCTTTCTCGCATCC 58.873 50.000 0.00 0.00 0.00 3.51
28 29 2.766263 TGTGGTATCTTTCTCGCATCCT 59.234 45.455 0.00 0.00 0.00 3.24
29 30 3.181475 TGTGGTATCTTTCTCGCATCCTC 60.181 47.826 0.00 0.00 0.00 3.71
30 31 3.031013 TGGTATCTTTCTCGCATCCTCA 58.969 45.455 0.00 0.00 0.00 3.86
31 32 3.450817 TGGTATCTTTCTCGCATCCTCAA 59.549 43.478 0.00 0.00 0.00 3.02
32 33 3.804873 GGTATCTTTCTCGCATCCTCAAC 59.195 47.826 0.00 0.00 0.00 3.18
33 34 3.902881 ATCTTTCTCGCATCCTCAACT 57.097 42.857 0.00 0.00 0.00 3.16
34 35 3.685139 TCTTTCTCGCATCCTCAACTT 57.315 42.857 0.00 0.00 0.00 2.66
35 36 3.329386 TCTTTCTCGCATCCTCAACTTG 58.671 45.455 0.00 0.00 0.00 3.16
36 37 2.839486 TTCTCGCATCCTCAACTTGT 57.161 45.000 0.00 0.00 0.00 3.16
37 38 2.370281 TCTCGCATCCTCAACTTGTC 57.630 50.000 0.00 0.00 0.00 3.18
38 39 1.618343 TCTCGCATCCTCAACTTGTCA 59.382 47.619 0.00 0.00 0.00 3.58
39 40 2.037121 TCTCGCATCCTCAACTTGTCAA 59.963 45.455 0.00 0.00 0.00 3.18
40 41 2.414481 CTCGCATCCTCAACTTGTCAAG 59.586 50.000 11.17 11.17 0.00 3.02
41 42 2.146342 CGCATCCTCAACTTGTCAAGT 58.854 47.619 12.62 12.62 45.46 3.16
42 43 3.006430 TCGCATCCTCAACTTGTCAAGTA 59.994 43.478 18.45 3.16 41.91 2.24
43 44 3.123621 CGCATCCTCAACTTGTCAAGTAC 59.876 47.826 18.45 1.42 41.91 2.73
44 45 3.437049 GCATCCTCAACTTGTCAAGTACC 59.563 47.826 18.45 0.00 41.91 3.34
45 46 3.764237 TCCTCAACTTGTCAAGTACCC 57.236 47.619 18.45 0.00 41.91 3.69
46 47 2.370849 TCCTCAACTTGTCAAGTACCCC 59.629 50.000 18.45 0.00 41.91 4.95
47 48 2.552373 CCTCAACTTGTCAAGTACCCCC 60.552 54.545 18.45 0.00 41.91 5.40
48 49 1.071071 TCAACTTGTCAAGTACCCCCG 59.929 52.381 18.45 4.23 41.91 5.73
49 50 1.134228 AACTTGTCAAGTACCCCCGT 58.866 50.000 18.45 0.00 41.91 5.28
50 51 0.395312 ACTTGTCAAGTACCCCCGTG 59.605 55.000 16.74 0.00 40.69 4.94
51 52 0.682852 CTTGTCAAGTACCCCCGTGA 59.317 55.000 4.27 0.00 0.00 4.35
52 53 1.278127 CTTGTCAAGTACCCCCGTGAT 59.722 52.381 4.27 0.00 0.00 3.06
53 54 0.611200 TGTCAAGTACCCCCGTGATG 59.389 55.000 0.00 0.00 0.00 3.07
54 55 0.611714 GTCAAGTACCCCCGTGATGT 59.388 55.000 0.00 0.00 0.00 3.06
55 56 0.611200 TCAAGTACCCCCGTGATGTG 59.389 55.000 0.00 0.00 0.00 3.21
56 57 1.024579 CAAGTACCCCCGTGATGTGC 61.025 60.000 0.00 0.00 0.00 4.57
57 58 1.198759 AAGTACCCCCGTGATGTGCT 61.199 55.000 0.00 0.00 0.00 4.40
58 59 1.153429 GTACCCCCGTGATGTGCTC 60.153 63.158 0.00 0.00 0.00 4.26
59 60 2.717044 TACCCCCGTGATGTGCTCG 61.717 63.158 0.00 0.00 0.00 5.03
63 64 4.402192 CCGTGATGTGCTCGGTAG 57.598 61.111 0.00 0.00 45.89 3.18
64 65 1.511305 CCGTGATGTGCTCGGTAGT 59.489 57.895 0.00 0.00 45.89 2.73
65 66 0.802222 CCGTGATGTGCTCGGTAGTG 60.802 60.000 0.00 0.00 45.89 2.74
66 67 1.413767 CGTGATGTGCTCGGTAGTGC 61.414 60.000 0.00 0.00 37.38 4.40
67 68 1.084370 GTGATGTGCTCGGTAGTGCC 61.084 60.000 0.00 0.00 36.14 5.01
80 81 3.910648 GGTAGTGCCGGAATCTACATAC 58.089 50.000 22.75 9.86 36.68 2.39
81 82 3.305881 GGTAGTGCCGGAATCTACATACC 60.306 52.174 22.75 12.41 36.68 2.73
82 83 2.394632 AGTGCCGGAATCTACATACCA 58.605 47.619 5.05 0.00 0.00 3.25
83 84 2.769663 AGTGCCGGAATCTACATACCAA 59.230 45.455 5.05 0.00 0.00 3.67
84 85 3.391296 AGTGCCGGAATCTACATACCAAT 59.609 43.478 5.05 0.00 0.00 3.16
85 86 4.134563 GTGCCGGAATCTACATACCAATT 58.865 43.478 5.05 0.00 0.00 2.32
86 87 4.578928 GTGCCGGAATCTACATACCAATTT 59.421 41.667 5.05 0.00 0.00 1.82
87 88 4.578516 TGCCGGAATCTACATACCAATTTG 59.421 41.667 5.05 0.00 0.00 2.32
88 89 4.578928 GCCGGAATCTACATACCAATTTGT 59.421 41.667 5.05 0.00 0.00 2.83
89 90 5.505654 GCCGGAATCTACATACCAATTTGTG 60.506 44.000 5.05 0.00 0.00 3.33
90 91 5.588648 CCGGAATCTACATACCAATTTGTGT 59.411 40.000 0.00 0.00 0.00 3.72
91 92 6.238374 CCGGAATCTACATACCAATTTGTGTC 60.238 42.308 0.00 0.00 0.00 3.67
92 93 6.315144 CGGAATCTACATACCAATTTGTGTCA 59.685 38.462 0.00 0.00 0.00 3.58
93 94 7.148323 CGGAATCTACATACCAATTTGTGTCAA 60.148 37.037 0.00 0.00 0.00 3.18
94 95 8.686334 GGAATCTACATACCAATTTGTGTCAAT 58.314 33.333 0.00 0.00 0.00 2.57
95 96 9.507280 GAATCTACATACCAATTTGTGTCAATG 57.493 33.333 0.00 0.00 0.00 2.82
96 97 6.851609 TCTACATACCAATTTGTGTCAATGC 58.148 36.000 0.00 0.00 0.00 3.56
97 98 4.819769 ACATACCAATTTGTGTCAATGCC 58.180 39.130 0.00 0.00 0.00 4.40
98 99 4.282957 ACATACCAATTTGTGTCAATGCCA 59.717 37.500 0.00 0.00 0.00 4.92
99 100 5.046448 ACATACCAATTTGTGTCAATGCCAT 60.046 36.000 0.00 0.00 0.00 4.40
100 101 6.154192 ACATACCAATTTGTGTCAATGCCATA 59.846 34.615 0.00 0.00 0.00 2.74
101 102 5.075858 ACCAATTTGTGTCAATGCCATAG 57.924 39.130 0.00 0.00 0.00 2.23
102 103 4.081531 ACCAATTTGTGTCAATGCCATAGG 60.082 41.667 0.00 0.00 0.00 2.57
103 104 4.160065 CCAATTTGTGTCAATGCCATAGGA 59.840 41.667 0.00 0.00 0.00 2.94
104 105 5.345702 CAATTTGTGTCAATGCCATAGGAG 58.654 41.667 0.00 0.00 0.00 3.69
105 106 3.719268 TTGTGTCAATGCCATAGGAGT 57.281 42.857 0.00 0.00 0.00 3.85
106 107 3.266510 TGTGTCAATGCCATAGGAGTC 57.733 47.619 0.00 0.00 0.00 3.36
107 108 2.571202 TGTGTCAATGCCATAGGAGTCA 59.429 45.455 0.00 0.00 0.00 3.41
108 109 3.008923 TGTGTCAATGCCATAGGAGTCAA 59.991 43.478 0.00 0.00 0.00 3.18
109 110 4.202441 GTGTCAATGCCATAGGAGTCAAT 58.798 43.478 0.00 0.00 0.00 2.57
110 111 4.036027 GTGTCAATGCCATAGGAGTCAATG 59.964 45.833 0.00 0.00 0.00 2.82
111 112 3.004106 GTCAATGCCATAGGAGTCAATGC 59.996 47.826 0.00 0.00 0.00 3.56
112 113 2.283145 ATGCCATAGGAGTCAATGCC 57.717 50.000 0.00 0.00 0.00 4.40
113 114 0.918258 TGCCATAGGAGTCAATGCCA 59.082 50.000 0.00 0.00 0.00 4.92
114 115 1.312815 GCCATAGGAGTCAATGCCAC 58.687 55.000 0.00 0.00 0.00 5.01
115 116 1.408683 GCCATAGGAGTCAATGCCACA 60.409 52.381 0.00 0.00 0.00 4.17
116 117 2.750807 GCCATAGGAGTCAATGCCACAT 60.751 50.000 0.00 0.00 0.00 3.21
117 118 2.882761 CCATAGGAGTCAATGCCACATG 59.117 50.000 0.00 0.00 0.00 3.21
118 119 3.434024 CCATAGGAGTCAATGCCACATGA 60.434 47.826 0.00 0.00 0.00 3.07
119 120 2.885135 AGGAGTCAATGCCACATGAA 57.115 45.000 0.00 0.00 0.00 2.57
120 121 2.719739 AGGAGTCAATGCCACATGAAG 58.280 47.619 0.00 0.00 0.00 3.02
121 122 2.306805 AGGAGTCAATGCCACATGAAGA 59.693 45.455 0.00 0.00 0.00 2.87
122 123 3.084039 GGAGTCAATGCCACATGAAGAA 58.916 45.455 0.00 0.00 0.00 2.52
123 124 3.128242 GGAGTCAATGCCACATGAAGAAG 59.872 47.826 0.00 0.00 0.00 2.85
124 125 3.755378 GAGTCAATGCCACATGAAGAAGT 59.245 43.478 0.00 0.00 0.00 3.01
125 126 3.504906 AGTCAATGCCACATGAAGAAGTG 59.495 43.478 0.00 0.00 35.56 3.16
126 127 3.503363 GTCAATGCCACATGAAGAAGTGA 59.497 43.478 0.00 0.00 37.97 3.41
127 128 3.754850 TCAATGCCACATGAAGAAGTGAG 59.245 43.478 0.00 0.00 37.97 3.51
128 129 3.708403 ATGCCACATGAAGAAGTGAGA 57.292 42.857 0.00 0.00 37.97 3.27
129 130 2.771089 TGCCACATGAAGAAGTGAGAC 58.229 47.619 0.00 0.00 37.97 3.36
130 131 2.104622 TGCCACATGAAGAAGTGAGACA 59.895 45.455 0.00 0.00 37.97 3.41
131 132 2.740981 GCCACATGAAGAAGTGAGACAG 59.259 50.000 0.00 0.00 37.97 3.51
132 133 3.555795 GCCACATGAAGAAGTGAGACAGA 60.556 47.826 0.00 0.00 37.97 3.41
133 134 4.829968 CCACATGAAGAAGTGAGACAGAT 58.170 43.478 0.00 0.00 37.97 2.90
134 135 5.625426 GCCACATGAAGAAGTGAGACAGATA 60.625 44.000 0.00 0.00 37.97 1.98
135 136 5.809562 CCACATGAAGAAGTGAGACAGATAC 59.190 44.000 0.00 0.00 37.97 2.24
136 137 6.393171 CACATGAAGAAGTGAGACAGATACA 58.607 40.000 0.00 0.00 37.97 2.29
137 138 6.870439 CACATGAAGAAGTGAGACAGATACAA 59.130 38.462 0.00 0.00 37.97 2.41
138 139 7.386025 CACATGAAGAAGTGAGACAGATACAAA 59.614 37.037 0.00 0.00 37.97 2.83
139 140 7.601886 ACATGAAGAAGTGAGACAGATACAAAG 59.398 37.037 0.00 0.00 0.00 2.77
140 141 7.290110 TGAAGAAGTGAGACAGATACAAAGA 57.710 36.000 0.00 0.00 0.00 2.52
141 142 7.374272 TGAAGAAGTGAGACAGATACAAAGAG 58.626 38.462 0.00 0.00 0.00 2.85
142 143 6.279513 AGAAGTGAGACAGATACAAAGAGG 57.720 41.667 0.00 0.00 0.00 3.69
143 144 5.186797 AGAAGTGAGACAGATACAAAGAGGG 59.813 44.000 0.00 0.00 0.00 4.30
144 145 3.772025 AGTGAGACAGATACAAAGAGGGG 59.228 47.826 0.00 0.00 0.00 4.79
145 146 3.515901 GTGAGACAGATACAAAGAGGGGT 59.484 47.826 0.00 0.00 0.00 4.95
146 147 3.515502 TGAGACAGATACAAAGAGGGGTG 59.484 47.826 0.00 0.00 0.00 4.61
147 148 3.769844 GAGACAGATACAAAGAGGGGTGA 59.230 47.826 0.00 0.00 0.00 4.02
148 149 4.366267 AGACAGATACAAAGAGGGGTGAT 58.634 43.478 0.00 0.00 0.00 3.06
149 150 4.407296 AGACAGATACAAAGAGGGGTGATC 59.593 45.833 0.00 0.00 0.00 2.92
150 151 4.104086 ACAGATACAAAGAGGGGTGATCA 58.896 43.478 0.00 0.00 0.00 2.92
151 152 4.536090 ACAGATACAAAGAGGGGTGATCAA 59.464 41.667 0.00 0.00 0.00 2.57
152 153 4.878397 CAGATACAAAGAGGGGTGATCAAC 59.122 45.833 0.73 0.73 0.00 3.18
153 154 4.536090 AGATACAAAGAGGGGTGATCAACA 59.464 41.667 13.90 0.00 0.00 3.33
154 155 3.814504 ACAAAGAGGGGTGATCAACAT 57.185 42.857 13.90 0.00 0.00 2.71
155 156 4.118168 ACAAAGAGGGGTGATCAACATT 57.882 40.909 13.90 0.00 0.00 2.71
156 157 3.828451 ACAAAGAGGGGTGATCAACATTG 59.172 43.478 13.90 11.13 0.00 2.82
157 158 4.081406 CAAAGAGGGGTGATCAACATTGA 58.919 43.478 13.90 0.00 42.14 2.57
177 178 1.655372 TCCATCAGGACCACATGACA 58.345 50.000 0.00 0.00 39.59 3.58
178 179 1.278985 TCCATCAGGACCACATGACAC 59.721 52.381 0.00 0.00 39.59 3.67
179 180 1.280133 CCATCAGGACCACATGACACT 59.720 52.381 0.00 0.00 39.59 3.55
180 181 2.290514 CCATCAGGACCACATGACACTT 60.291 50.000 0.00 0.00 39.59 3.16
181 182 2.549064 TCAGGACCACATGACACTTG 57.451 50.000 0.00 0.00 31.79 3.16
182 183 1.072173 TCAGGACCACATGACACTTGG 59.928 52.381 0.00 0.00 31.79 3.61
183 184 1.072173 CAGGACCACATGACACTTGGA 59.928 52.381 10.53 0.00 34.24 3.53
184 185 1.072331 AGGACCACATGACACTTGGAC 59.928 52.381 10.53 4.96 34.24 4.02
185 186 1.148310 GACCACATGACACTTGGACG 58.852 55.000 10.53 0.00 34.24 4.79
186 187 0.468226 ACCACATGACACTTGGACGT 59.532 50.000 10.53 0.00 34.24 4.34
187 188 0.867746 CCACATGACACTTGGACGTG 59.132 55.000 0.00 0.00 40.67 4.49
188 189 0.235665 CACATGACACTTGGACGTGC 59.764 55.000 0.00 0.00 38.45 5.34
189 190 0.179059 ACATGACACTTGGACGTGCA 60.179 50.000 5.33 5.33 38.45 4.57
190 191 1.159285 CATGACACTTGGACGTGCAT 58.841 50.000 11.62 0.00 38.45 3.96
191 192 1.536766 CATGACACTTGGACGTGCATT 59.463 47.619 11.62 0.00 38.45 3.56
192 193 1.674359 TGACACTTGGACGTGCATTT 58.326 45.000 11.62 0.00 38.45 2.32
193 194 1.333308 TGACACTTGGACGTGCATTTG 59.667 47.619 11.62 13.36 38.45 2.32
194 195 0.667993 ACACTTGGACGTGCATTTGG 59.332 50.000 11.62 3.80 38.45 3.28
195 196 0.039256 CACTTGGACGTGCATTTGGG 60.039 55.000 11.62 1.61 0.00 4.12
196 197 1.178534 ACTTGGACGTGCATTTGGGG 61.179 55.000 11.62 0.24 0.00 4.96
197 198 0.893270 CTTGGACGTGCATTTGGGGA 60.893 55.000 11.62 0.00 0.00 4.81
198 199 0.893270 TTGGACGTGCATTTGGGGAG 60.893 55.000 11.62 0.00 0.00 4.30
199 200 1.002624 GGACGTGCATTTGGGGAGA 60.003 57.895 0.63 0.00 0.00 3.71
200 201 0.394352 GGACGTGCATTTGGGGAGAT 60.394 55.000 0.63 0.00 0.00 2.75
201 202 0.734889 GACGTGCATTTGGGGAGATG 59.265 55.000 0.00 0.00 0.00 2.90
202 203 1.315257 ACGTGCATTTGGGGAGATGC 61.315 55.000 0.00 1.60 46.73 3.91
203 204 1.818555 GTGCATTTGGGGAGATGCC 59.181 57.895 5.93 0.00 46.16 4.40
204 205 0.971959 GTGCATTTGGGGAGATGCCA 60.972 55.000 5.93 0.00 46.16 4.92
205 206 0.252148 TGCATTTGGGGAGATGCCAA 60.252 50.000 5.93 0.00 46.16 4.52
206 207 0.903942 GCATTTGGGGAGATGCCAAA 59.096 50.000 0.00 0.00 42.09 3.28
207 208 1.487558 GCATTTGGGGAGATGCCAAAT 59.512 47.619 0.00 0.00 42.09 2.32
208 209 2.092807 GCATTTGGGGAGATGCCAAATT 60.093 45.455 0.00 0.00 42.09 1.82
209 210 3.622953 GCATTTGGGGAGATGCCAAATTT 60.623 43.478 0.00 0.00 42.09 1.82
210 211 4.383989 GCATTTGGGGAGATGCCAAATTTA 60.384 41.667 0.00 0.00 42.09 1.40
211 212 5.743117 CATTTGGGGAGATGCCAAATTTAA 58.257 37.500 0.00 0.00 40.66 1.52
212 213 5.832539 TTTGGGGAGATGCCAAATTTAAA 57.167 34.783 0.00 0.00 38.95 1.52
213 214 5.832539 TTGGGGAGATGCCAAATTTAAAA 57.167 34.783 0.00 0.00 38.95 1.52
214 215 5.159273 TGGGGAGATGCCAAATTTAAAAC 57.841 39.130 0.00 0.00 38.95 2.43
215 216 4.019771 TGGGGAGATGCCAAATTTAAAACC 60.020 41.667 0.00 0.00 38.95 3.27
216 217 4.019771 GGGGAGATGCCAAATTTAAAACCA 60.020 41.667 0.00 0.00 38.95 3.67
217 218 5.339118 GGGGAGATGCCAAATTTAAAACCAT 60.339 40.000 0.00 0.00 38.95 3.55
218 219 6.126911 GGGGAGATGCCAAATTTAAAACCATA 60.127 38.462 0.00 0.00 38.95 2.74
219 220 7.334858 GGGAGATGCCAAATTTAAAACCATAA 58.665 34.615 0.00 0.00 38.95 1.90
220 221 7.826744 GGGAGATGCCAAATTTAAAACCATAAA 59.173 33.333 0.00 0.00 38.95 1.40
221 222 9.225436 GGAGATGCCAAATTTAAAACCATAAAA 57.775 29.630 0.00 0.00 36.34 1.52
256 257 8.753497 TTCTACTTCAGAGATATAGTTGCTCA 57.247 34.615 0.00 0.00 33.83 4.26
257 258 8.932434 TCTACTTCAGAGATATAGTTGCTCAT 57.068 34.615 0.00 0.00 0.00 2.90
258 259 8.791675 TCTACTTCAGAGATATAGTTGCTCATG 58.208 37.037 0.00 0.00 0.00 3.07
259 260 7.594351 ACTTCAGAGATATAGTTGCTCATGA 57.406 36.000 0.00 0.00 0.00 3.07
260 261 8.192743 ACTTCAGAGATATAGTTGCTCATGAT 57.807 34.615 0.00 0.00 0.00 2.45
261 262 8.089597 ACTTCAGAGATATAGTTGCTCATGATG 58.910 37.037 0.00 0.00 0.00 3.07
262 263 6.396450 TCAGAGATATAGTTGCTCATGATGC 58.604 40.000 0.00 2.91 0.00 3.91
263 264 5.581479 CAGAGATATAGTTGCTCATGATGCC 59.419 44.000 12.62 0.00 0.00 4.40
264 265 5.484644 AGAGATATAGTTGCTCATGATGCCT 59.515 40.000 12.62 7.52 0.00 4.75
265 266 6.013553 AGAGATATAGTTGCTCATGATGCCTT 60.014 38.462 12.62 3.78 0.00 4.35
266 267 6.171921 AGATATAGTTGCTCATGATGCCTTC 58.828 40.000 12.62 5.49 0.00 3.46
267 268 2.502142 AGTTGCTCATGATGCCTTCA 57.498 45.000 12.62 0.00 39.12 3.02
268 269 2.799017 AGTTGCTCATGATGCCTTCAA 58.201 42.857 12.62 2.13 38.03 2.69
269 270 2.490903 AGTTGCTCATGATGCCTTCAAC 59.509 45.455 12.62 11.41 38.03 3.18
270 271 2.490903 GTTGCTCATGATGCCTTCAACT 59.509 45.455 12.62 0.00 38.03 3.16
271 272 2.089201 TGCTCATGATGCCTTCAACTG 58.911 47.619 12.62 0.00 38.03 3.16
272 273 1.404391 GCTCATGATGCCTTCAACTGG 59.596 52.381 0.00 0.00 38.03 4.00
273 274 2.719739 CTCATGATGCCTTCAACTGGT 58.280 47.619 0.00 0.00 38.03 4.00
274 275 3.087031 CTCATGATGCCTTCAACTGGTT 58.913 45.455 0.00 0.00 38.03 3.67
275 276 4.264253 CTCATGATGCCTTCAACTGGTTA 58.736 43.478 0.00 0.00 38.03 2.85
276 277 4.858850 TCATGATGCCTTCAACTGGTTAT 58.141 39.130 0.00 0.00 38.03 1.89
277 278 4.641541 TCATGATGCCTTCAACTGGTTATG 59.358 41.667 0.00 0.00 38.03 1.90
278 279 3.355378 TGATGCCTTCAACTGGTTATGG 58.645 45.455 0.00 0.00 0.00 2.74
279 280 3.010027 TGATGCCTTCAACTGGTTATGGA 59.990 43.478 0.00 0.00 0.00 3.41
280 281 3.517296 TGCCTTCAACTGGTTATGGAA 57.483 42.857 0.00 0.00 0.00 3.53
281 282 3.838565 TGCCTTCAACTGGTTATGGAAA 58.161 40.909 0.00 0.00 0.00 3.13
282 283 4.415596 TGCCTTCAACTGGTTATGGAAAT 58.584 39.130 0.00 0.00 0.00 2.17
283 284 4.462483 TGCCTTCAACTGGTTATGGAAATC 59.538 41.667 0.00 0.00 0.00 2.17
284 285 4.142160 GCCTTCAACTGGTTATGGAAATCC 60.142 45.833 0.00 0.00 0.00 3.01
299 300 6.024552 TGGAAATCCAAAAGTATGCTCAAC 57.975 37.500 0.00 0.00 44.35 3.18
300 301 5.538053 TGGAAATCCAAAAGTATGCTCAACA 59.462 36.000 0.00 0.00 44.35 3.33
301 302 6.211184 TGGAAATCCAAAAGTATGCTCAACAT 59.789 34.615 0.00 0.00 44.35 2.71
302 303 6.753744 GGAAATCCAAAAGTATGCTCAACATC 59.246 38.462 0.00 0.00 36.72 3.06
303 304 6.839124 AATCCAAAAGTATGCTCAACATCA 57.161 33.333 0.00 0.00 40.38 3.07
304 305 6.839124 ATCCAAAAGTATGCTCAACATCAA 57.161 33.333 0.00 0.00 40.38 2.57
305 306 6.647334 TCCAAAAGTATGCTCAACATCAAA 57.353 33.333 0.00 0.00 40.38 2.69
306 307 6.680810 TCCAAAAGTATGCTCAACATCAAAG 58.319 36.000 0.00 0.00 40.38 2.77
307 308 6.265196 TCCAAAAGTATGCTCAACATCAAAGT 59.735 34.615 0.00 0.00 40.38 2.66
308 309 6.925165 CCAAAAGTATGCTCAACATCAAAGTT 59.075 34.615 0.00 0.00 40.38 2.66
309 310 7.439056 CCAAAAGTATGCTCAACATCAAAGTTT 59.561 33.333 0.00 0.00 40.38 2.66
310 311 8.819974 CAAAAGTATGCTCAACATCAAAGTTTT 58.180 29.630 0.00 0.00 40.38 2.43
311 312 8.947055 AAAGTATGCTCAACATCAAAGTTTTT 57.053 26.923 0.00 0.00 40.38 1.94
312 313 7.935338 AGTATGCTCAACATCAAAGTTTTTG 57.065 32.000 0.00 0.00 40.38 2.44
313 314 6.925165 AGTATGCTCAACATCAAAGTTTTTGG 59.075 34.615 2.09 0.00 40.38 3.28
314 315 3.870419 TGCTCAACATCAAAGTTTTTGGC 59.130 39.130 2.09 0.00 0.00 4.52
315 316 4.122046 GCTCAACATCAAAGTTTTTGGCT 58.878 39.130 2.09 0.00 0.00 4.75
316 317 4.025480 GCTCAACATCAAAGTTTTTGGCTG 60.025 41.667 2.09 3.54 0.00 4.85
317 318 4.440880 TCAACATCAAAGTTTTTGGCTGG 58.559 39.130 2.09 0.00 0.00 4.85
318 319 4.081198 TCAACATCAAAGTTTTTGGCTGGT 60.081 37.500 2.09 0.00 0.00 4.00
319 320 4.486125 ACATCAAAGTTTTTGGCTGGTT 57.514 36.364 2.09 0.00 0.00 3.67
320 321 4.441792 ACATCAAAGTTTTTGGCTGGTTC 58.558 39.130 2.09 0.00 0.00 3.62
321 322 4.162131 ACATCAAAGTTTTTGGCTGGTTCT 59.838 37.500 2.09 0.00 0.00 3.01
322 323 4.817318 TCAAAGTTTTTGGCTGGTTCTT 57.183 36.364 2.09 0.00 0.00 2.52
323 324 5.923733 TCAAAGTTTTTGGCTGGTTCTTA 57.076 34.783 2.09 0.00 0.00 2.10
324 325 5.656480 TCAAAGTTTTTGGCTGGTTCTTAC 58.344 37.500 2.09 0.00 0.00 2.34
325 326 5.420739 TCAAAGTTTTTGGCTGGTTCTTACT 59.579 36.000 2.09 0.00 0.00 2.24
326 327 4.918810 AGTTTTTGGCTGGTTCTTACTG 57.081 40.909 0.00 0.00 0.00 2.74
327 328 3.636764 AGTTTTTGGCTGGTTCTTACTGG 59.363 43.478 0.00 0.00 0.00 4.00
328 329 1.616159 TTTGGCTGGTTCTTACTGGC 58.384 50.000 0.00 0.00 0.00 4.85
329 330 0.771127 TTGGCTGGTTCTTACTGGCT 59.229 50.000 0.00 0.00 0.00 4.75
330 331 0.036732 TGGCTGGTTCTTACTGGCTG 59.963 55.000 0.00 0.00 0.00 4.85
331 332 0.324943 GGCTGGTTCTTACTGGCTGA 59.675 55.000 0.00 0.00 0.00 4.26
332 333 1.443802 GCTGGTTCTTACTGGCTGAC 58.556 55.000 0.00 0.00 0.00 3.51
333 334 1.946283 GCTGGTTCTTACTGGCTGACC 60.946 57.143 0.00 0.00 0.00 4.02
334 335 0.320374 TGGTTCTTACTGGCTGACCG 59.680 55.000 0.00 0.00 39.70 4.79
335 336 0.606604 GGTTCTTACTGGCTGACCGA 59.393 55.000 0.00 0.00 39.70 4.69
336 337 1.672145 GGTTCTTACTGGCTGACCGAC 60.672 57.143 0.00 0.00 39.70 4.79
337 338 1.272769 GTTCTTACTGGCTGACCGACT 59.727 52.381 0.00 0.00 39.70 4.18
338 339 1.174783 TCTTACTGGCTGACCGACTC 58.825 55.000 0.00 0.00 39.70 3.36
339 340 0.888619 CTTACTGGCTGACCGACTCA 59.111 55.000 0.00 0.00 39.70 3.41
340 341 1.272490 CTTACTGGCTGACCGACTCAA 59.728 52.381 0.00 0.00 39.70 3.02
341 342 1.557099 TACTGGCTGACCGACTCAAT 58.443 50.000 0.00 0.00 39.70 2.57
342 343 1.557099 ACTGGCTGACCGACTCAATA 58.443 50.000 0.00 0.00 39.70 1.90
343 344 2.111384 ACTGGCTGACCGACTCAATAT 58.889 47.619 0.00 0.00 39.70 1.28
344 345 2.101582 ACTGGCTGACCGACTCAATATC 59.898 50.000 0.00 0.00 39.70 1.63
345 346 2.101415 CTGGCTGACCGACTCAATATCA 59.899 50.000 0.00 0.00 39.70 2.15
346 347 2.101415 TGGCTGACCGACTCAATATCAG 59.899 50.000 0.00 0.00 39.70 2.90
347 348 2.546795 GGCTGACCGACTCAATATCAGG 60.547 54.545 0.00 0.00 37.78 3.86
348 349 2.362397 GCTGACCGACTCAATATCAGGA 59.638 50.000 0.00 0.00 37.78 3.86
349 350 3.181475 GCTGACCGACTCAATATCAGGAA 60.181 47.826 0.00 0.00 37.78 3.36
350 351 4.363999 CTGACCGACTCAATATCAGGAAC 58.636 47.826 0.00 0.00 34.43 3.62
351 352 3.767131 TGACCGACTCAATATCAGGAACA 59.233 43.478 0.00 0.00 0.00 3.18
352 353 4.405680 TGACCGACTCAATATCAGGAACAT 59.594 41.667 0.00 0.00 0.00 2.71
353 354 4.697514 ACCGACTCAATATCAGGAACATG 58.302 43.478 0.00 0.00 0.00 3.21
354 355 3.496130 CCGACTCAATATCAGGAACATGC 59.504 47.826 0.00 0.00 0.00 4.06
355 356 4.375272 CGACTCAATATCAGGAACATGCT 58.625 43.478 0.00 0.00 0.00 3.79
356 357 4.447054 CGACTCAATATCAGGAACATGCTC 59.553 45.833 0.00 0.00 0.00 4.26
357 358 5.363101 GACTCAATATCAGGAACATGCTCA 58.637 41.667 0.00 0.00 0.00 4.26
358 359 5.366460 ACTCAATATCAGGAACATGCTCAG 58.634 41.667 0.00 0.00 0.00 3.35
359 360 5.129980 ACTCAATATCAGGAACATGCTCAGA 59.870 40.000 0.00 0.00 0.00 3.27
360 361 5.993055 TCAATATCAGGAACATGCTCAGAA 58.007 37.500 0.00 0.00 0.00 3.02
361 362 6.053650 TCAATATCAGGAACATGCTCAGAAG 58.946 40.000 0.00 0.00 0.00 2.85
362 363 5.883685 ATATCAGGAACATGCTCAGAAGA 57.116 39.130 0.00 0.00 0.00 2.87
363 364 4.564782 ATCAGGAACATGCTCAGAAGAA 57.435 40.909 0.00 0.00 0.00 2.52
364 365 3.935315 TCAGGAACATGCTCAGAAGAAG 58.065 45.455 0.00 0.00 0.00 2.85
365 366 3.580022 TCAGGAACATGCTCAGAAGAAGA 59.420 43.478 0.00 0.00 0.00 2.87
366 367 3.683822 CAGGAACATGCTCAGAAGAAGAC 59.316 47.826 0.00 0.00 0.00 3.01
367 368 3.326006 AGGAACATGCTCAGAAGAAGACA 59.674 43.478 0.00 0.00 0.00 3.41
368 369 3.434984 GGAACATGCTCAGAAGAAGACAC 59.565 47.826 0.00 0.00 0.00 3.67
369 370 4.314121 GAACATGCTCAGAAGAAGACACT 58.686 43.478 0.00 0.00 0.00 3.55
370 371 5.473931 GAACATGCTCAGAAGAAGACACTA 58.526 41.667 0.00 0.00 0.00 2.74
371 372 4.815269 ACATGCTCAGAAGAAGACACTAC 58.185 43.478 0.00 0.00 0.00 2.73
372 373 4.281941 ACATGCTCAGAAGAAGACACTACA 59.718 41.667 0.00 0.00 0.00 2.74
373 374 4.937201 TGCTCAGAAGAAGACACTACAA 57.063 40.909 0.00 0.00 0.00 2.41
374 375 5.474578 TGCTCAGAAGAAGACACTACAAT 57.525 39.130 0.00 0.00 0.00 2.71
375 376 6.590234 TGCTCAGAAGAAGACACTACAATA 57.410 37.500 0.00 0.00 0.00 1.90
376 377 6.390721 TGCTCAGAAGAAGACACTACAATAC 58.609 40.000 0.00 0.00 0.00 1.89
377 378 6.209589 TGCTCAGAAGAAGACACTACAATACT 59.790 38.462 0.00 0.00 0.00 2.12
378 379 6.529829 GCTCAGAAGAAGACACTACAATACTG 59.470 42.308 0.00 0.00 0.00 2.74
379 380 6.925211 TCAGAAGAAGACACTACAATACTGG 58.075 40.000 0.00 0.00 0.00 4.00
380 381 6.719829 TCAGAAGAAGACACTACAATACTGGA 59.280 38.462 0.00 0.00 0.00 3.86
381 382 7.232737 TCAGAAGAAGACACTACAATACTGGAA 59.767 37.037 0.00 0.00 0.00 3.53
382 383 7.872993 CAGAAGAAGACACTACAATACTGGAAA 59.127 37.037 0.00 0.00 0.00 3.13
383 384 7.873505 AGAAGAAGACACTACAATACTGGAAAC 59.126 37.037 0.00 0.00 0.00 2.78
384 385 7.062749 AGAAGACACTACAATACTGGAAACA 57.937 36.000 0.00 0.00 39.59 2.83
385 386 7.506114 AGAAGACACTACAATACTGGAAACAA 58.494 34.615 0.00 0.00 42.06 2.83
386 387 8.157476 AGAAGACACTACAATACTGGAAACAAT 58.843 33.333 0.00 0.00 42.06 2.71
387 388 7.907214 AGACACTACAATACTGGAAACAATC 57.093 36.000 0.00 0.00 42.06 2.67
388 389 7.680730 AGACACTACAATACTGGAAACAATCT 58.319 34.615 0.00 0.00 42.06 2.40
389 390 8.812972 AGACACTACAATACTGGAAACAATCTA 58.187 33.333 0.00 0.00 42.06 1.98
390 391 9.088512 GACACTACAATACTGGAAACAATCTAG 57.911 37.037 0.00 0.00 42.06 2.43
391 392 8.812972 ACACTACAATACTGGAAACAATCTAGA 58.187 33.333 0.00 0.00 38.88 2.43
392 393 9.088512 CACTACAATACTGGAAACAATCTAGAC 57.911 37.037 0.00 0.00 38.88 2.59
393 394 9.036980 ACTACAATACTGGAAACAATCTAGACT 57.963 33.333 0.00 0.00 38.88 3.24
396 397 8.258708 ACAATACTGGAAACAATCTAGACTACC 58.741 37.037 0.00 0.00 38.88 3.18
397 398 8.478877 CAATACTGGAAACAATCTAGACTACCT 58.521 37.037 0.00 0.00 38.88 3.08
398 399 6.287589 ACTGGAAACAATCTAGACTACCTG 57.712 41.667 0.00 0.80 38.88 4.00
399 400 5.086104 TGGAAACAATCTAGACTACCTGC 57.914 43.478 0.00 0.00 37.44 4.85
400 401 4.777896 TGGAAACAATCTAGACTACCTGCT 59.222 41.667 0.00 0.00 37.44 4.24
401 402 5.955959 TGGAAACAATCTAGACTACCTGCTA 59.044 40.000 0.00 0.00 37.44 3.49
402 403 6.611642 TGGAAACAATCTAGACTACCTGCTAT 59.388 38.462 0.00 0.00 37.44 2.97
403 404 6.926272 GGAAACAATCTAGACTACCTGCTATG 59.074 42.308 0.00 0.00 0.00 2.23
404 405 7.418025 GGAAACAATCTAGACTACCTGCTATGT 60.418 40.741 0.00 0.00 0.00 2.29
405 406 6.398234 ACAATCTAGACTACCTGCTATGTG 57.602 41.667 0.00 0.00 0.00 3.21
406 407 5.303078 ACAATCTAGACTACCTGCTATGTGG 59.697 44.000 0.00 0.00 0.00 4.17
407 408 4.790718 TCTAGACTACCTGCTATGTGGA 57.209 45.455 0.00 0.00 0.00 4.02
408 409 5.326283 TCTAGACTACCTGCTATGTGGAT 57.674 43.478 0.00 0.00 0.00 3.41
409 410 6.449830 TCTAGACTACCTGCTATGTGGATA 57.550 41.667 0.00 0.00 0.00 2.59
410 411 6.239396 TCTAGACTACCTGCTATGTGGATAC 58.761 44.000 0.00 0.00 0.00 2.24
427 428 2.337359 TACACTGGCCTTTCCTACCT 57.663 50.000 3.32 0.00 35.26 3.08
435 436 3.181412 TGGCCTTTCCTACCTTTTCCATT 60.181 43.478 3.32 0.00 35.26 3.16
563 564 1.095807 GGTTTGCTAGGCGGATGTCC 61.096 60.000 0.00 0.00 0.00 4.02
567 568 1.068250 GCTAGGCGGATGTCCAGAC 59.932 63.158 0.00 0.00 35.14 3.51
572 573 2.711922 GCGGATGTCCAGACTCCGT 61.712 63.158 25.51 3.95 45.30 4.69
684 909 6.555812 AAAAATGTCTAGACTCCCGAAAAC 57.444 37.500 23.01 0.00 0.00 2.43
849 1078 0.341961 AGCCTACCTACCATGGTCCA 59.658 55.000 23.76 3.39 41.22 4.02
852 1081 0.389391 CTACCTACCATGGTCCAGCG 59.611 60.000 23.76 10.66 41.22 5.18
883 1112 2.191354 CTACTCCACGCGTCCAACGA 62.191 60.000 9.86 0.00 46.05 3.85
1041 1278 0.033991 TCGTTCTCCTCCTCCTCCTG 60.034 60.000 0.00 0.00 0.00 3.86
1473 1710 1.307097 GCATGATGAAGAGGCTCACC 58.693 55.000 18.26 8.22 0.00 4.02
1724 1961 0.319986 GATTCCTAGCTAGGTGGCGC 60.320 60.000 33.84 18.52 44.02 6.53
1740 1977 4.163552 GTGGCGCTACCTTTAATTTGTTC 58.836 43.478 13.67 0.00 40.22 3.18
1868 2525 4.913154 AGGGTGGGAACTAGGAATACTA 57.087 45.455 0.00 0.00 0.00 1.82
1869 2526 5.435545 AGGGTGGGAACTAGGAATACTAT 57.564 43.478 0.00 0.00 0.00 2.12
1872 2529 5.246429 GGGTGGGAACTAGGAATACTATCTG 59.754 48.000 0.00 0.00 0.00 2.90
1875 2532 4.082136 GGGAACTAGGAATACTATCTGCCG 60.082 50.000 0.00 0.00 0.00 5.69
1876 2533 4.765856 GGAACTAGGAATACTATCTGCCGA 59.234 45.833 0.00 0.00 0.00 5.54
1877 2534 5.243283 GGAACTAGGAATACTATCTGCCGAA 59.757 44.000 0.00 0.00 0.00 4.30
1878 2535 6.071278 GGAACTAGGAATACTATCTGCCGAAT 60.071 42.308 0.00 0.00 0.00 3.34
1879 2536 7.122353 GGAACTAGGAATACTATCTGCCGAATA 59.878 40.741 0.00 0.00 0.00 1.75
1886 2543 9.817809 GGAATACTATCTGCCGAATATAAATCA 57.182 33.333 0.00 0.00 0.00 2.57
1935 2592 7.515643 CGATTGGTCGTTAAATTTAACACTCT 58.484 34.615 30.61 18.51 42.34 3.24
1939 2596 6.647895 TGGTCGTTAAATTTAACACTCTCTCC 59.352 38.462 30.61 21.86 42.34 3.71
1977 2634 8.844441 TTGTTGCTGTTTTAATACAGTACAAC 57.156 30.769 25.77 25.47 45.76 3.32
1979 2636 8.679100 TGTTGCTGTTTTAATACAGTACAACTT 58.321 29.630 28.14 0.00 45.76 2.66
1990 2647 5.733620 ACAGTACAACTTTAGGATCGGAA 57.266 39.130 0.00 0.00 0.00 4.30
2012 2670 9.111613 CGGAAGGAGTAGTAGATATTATACAGG 57.888 40.741 2.89 0.00 0.00 4.00
2069 2732 6.942886 TTTGCATTTACGACCATTGAATTC 57.057 33.333 0.00 0.00 0.00 2.17
2080 2743 6.071952 ACGACCATTGAATTCAAACAGCTAAT 60.072 34.615 23.91 2.98 39.55 1.73
2092 2755 6.503524 TCAAACAGCTAATCTTTGTTCAACC 58.496 36.000 0.00 0.00 34.18 3.77
2106 2769 5.506686 TGTTCAACCGTTGATTGAATTCA 57.493 34.783 14.64 3.38 45.27 2.57
2112 2943 7.432869 TCAACCGTTGATTGAATTCAGATTTT 58.567 30.769 9.99 0.00 33.16 1.82
2305 3140 8.898983 AAAAAGTTTGCTTCATTCAACATTTG 57.101 26.923 0.00 0.00 33.01 2.32
2346 3181 7.464977 GCATGAATGAAAAATAGTTGATGGTGC 60.465 37.037 0.00 0.00 0.00 5.01
2351 3186 5.538053 TGAAAAATAGTTGATGGTGCCTTCA 59.462 36.000 3.08 3.08 0.00 3.02
2461 3517 5.750352 AGAACGGAGGGAGTAACAAATTA 57.250 39.130 0.00 0.00 0.00 1.40
2471 3527 7.903145 AGGGAGTAACAAATTAATTGGTTTCC 58.097 34.615 22.84 22.06 43.66 3.13
2474 3530 9.366216 GGAGTAACAAATTAATTGGTTTCCATC 57.634 33.333 22.84 15.55 43.66 3.51
2533 3589 1.888512 GACAACTTGACATGGTGGCAT 59.111 47.619 7.34 0.00 33.90 4.40
2547 3603 2.497273 GGTGGCATGCATAAAAGGTTCT 59.503 45.455 21.36 0.00 0.00 3.01
2553 3609 5.106987 GGCATGCATAAAAGGTTCTGTTTTG 60.107 40.000 21.36 0.00 0.00 2.44
2650 3706 1.935933 CATCTACAACCGCACCTACC 58.064 55.000 0.00 0.00 0.00 3.18
2676 3732 0.605319 GGGTCCTCAAACATGCGTGA 60.605 55.000 14.17 0.00 0.00 4.35
2678 3734 1.812571 GGTCCTCAAACATGCGTGAAT 59.187 47.619 14.17 0.00 0.00 2.57
2681 3737 3.435327 GTCCTCAAACATGCGTGAATGTA 59.565 43.478 14.17 1.36 39.89 2.29
2688 3744 1.665679 CATGCGTGAATGTACCCTGTC 59.334 52.381 0.00 0.00 0.00 3.51
2690 3746 1.070914 TGCGTGAATGTACCCTGTCAA 59.929 47.619 0.00 0.00 0.00 3.18
2695 3751 3.375299 GTGAATGTACCCTGTCAATGCTC 59.625 47.826 0.00 0.00 0.00 4.26
2696 3752 3.008923 TGAATGTACCCTGTCAATGCTCA 59.991 43.478 0.00 0.00 0.00 4.26
2704 3760 2.358615 TCAATGCTCAGGCGCGTT 60.359 55.556 8.43 0.00 42.25 4.84
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.166459 TGCGAGAAAGATACCACAGAGG 59.834 50.000 0.00 0.00 45.67 3.69
4 5 3.510388 TGCGAGAAAGATACCACAGAG 57.490 47.619 0.00 0.00 0.00 3.35
5 6 3.181475 GGATGCGAGAAAGATACCACAGA 60.181 47.826 0.00 0.00 0.00 3.41
6 7 3.126831 GGATGCGAGAAAGATACCACAG 58.873 50.000 0.00 0.00 0.00 3.66
7 8 2.766263 AGGATGCGAGAAAGATACCACA 59.234 45.455 0.00 0.00 0.00 4.17
8 9 3.181475 TGAGGATGCGAGAAAGATACCAC 60.181 47.826 0.00 0.00 0.00 4.16
9 10 3.031013 TGAGGATGCGAGAAAGATACCA 58.969 45.455 0.00 0.00 0.00 3.25
10 11 3.735237 TGAGGATGCGAGAAAGATACC 57.265 47.619 0.00 0.00 0.00 2.73
11 12 4.688021 AGTTGAGGATGCGAGAAAGATAC 58.312 43.478 0.00 0.00 0.00 2.24
12 13 5.111989 CAAGTTGAGGATGCGAGAAAGATA 58.888 41.667 0.00 0.00 0.00 1.98
13 14 3.902881 AGTTGAGGATGCGAGAAAGAT 57.097 42.857 0.00 0.00 0.00 2.40
14 15 3.244215 ACAAGTTGAGGATGCGAGAAAGA 60.244 43.478 10.54 0.00 0.00 2.52
15 16 3.070018 ACAAGTTGAGGATGCGAGAAAG 58.930 45.455 10.54 0.00 0.00 2.62
16 17 3.067106 GACAAGTTGAGGATGCGAGAAA 58.933 45.455 10.54 0.00 0.00 2.52
17 18 2.037121 TGACAAGTTGAGGATGCGAGAA 59.963 45.455 10.54 0.00 0.00 2.87
18 19 1.618343 TGACAAGTTGAGGATGCGAGA 59.382 47.619 10.54 0.00 0.00 4.04
19 20 2.084610 TGACAAGTTGAGGATGCGAG 57.915 50.000 10.54 0.00 0.00 5.03
20 21 2.224281 ACTTGACAAGTTGAGGATGCGA 60.224 45.455 15.23 0.00 39.04 5.10
21 22 2.146342 ACTTGACAAGTTGAGGATGCG 58.854 47.619 15.23 0.00 39.04 4.73
22 23 3.437049 GGTACTTGACAAGTTGAGGATGC 59.563 47.826 25.10 2.99 42.81 3.91
23 24 4.003648 GGGTACTTGACAAGTTGAGGATG 58.996 47.826 25.10 0.00 42.81 3.51
24 25 3.009143 GGGGTACTTGACAAGTTGAGGAT 59.991 47.826 25.10 1.93 42.81 3.24
25 26 2.370849 GGGGTACTTGACAAGTTGAGGA 59.629 50.000 25.10 4.91 42.81 3.71
26 27 2.552373 GGGGGTACTTGACAAGTTGAGG 60.552 54.545 25.10 0.00 42.81 3.86
27 28 2.779506 GGGGGTACTTGACAAGTTGAG 58.220 52.381 25.10 0.00 42.81 3.02
28 29 1.071071 CGGGGGTACTTGACAAGTTGA 59.929 52.381 25.10 6.43 42.81 3.18
29 30 1.202722 ACGGGGGTACTTGACAAGTTG 60.203 52.381 25.10 11.21 42.81 3.16
30 31 1.134228 ACGGGGGTACTTGACAAGTT 58.866 50.000 25.10 10.27 42.81 2.66
31 32 0.395312 CACGGGGGTACTTGACAAGT 59.605 55.000 23.61 23.61 45.40 3.16
32 33 0.682852 TCACGGGGGTACTTGACAAG 59.317 55.000 13.77 13.77 0.00 3.16
33 34 1.002659 CATCACGGGGGTACTTGACAA 59.997 52.381 0.00 0.00 0.00 3.18
34 35 0.611200 CATCACGGGGGTACTTGACA 59.389 55.000 0.00 0.00 0.00 3.58
35 36 0.611714 ACATCACGGGGGTACTTGAC 59.388 55.000 0.00 0.00 0.00 3.18
36 37 0.611200 CACATCACGGGGGTACTTGA 59.389 55.000 0.00 0.00 0.00 3.02
37 38 1.024579 GCACATCACGGGGGTACTTG 61.025 60.000 0.00 0.00 0.00 3.16
38 39 1.198759 AGCACATCACGGGGGTACTT 61.199 55.000 0.00 0.00 0.00 2.24
39 40 1.612442 AGCACATCACGGGGGTACT 60.612 57.895 0.00 0.00 0.00 2.73
40 41 1.153429 GAGCACATCACGGGGGTAC 60.153 63.158 0.00 0.00 0.00 3.34
41 42 2.717044 CGAGCACATCACGGGGGTA 61.717 63.158 0.00 0.00 0.00 3.69
42 43 4.082523 CGAGCACATCACGGGGGT 62.083 66.667 0.00 0.00 0.00 4.95
43 44 4.838152 CCGAGCACATCACGGGGG 62.838 72.222 0.00 0.00 43.80 5.40
47 48 1.413767 GCACTACCGAGCACATCACG 61.414 60.000 0.00 0.00 0.00 4.35
48 49 1.084370 GGCACTACCGAGCACATCAC 61.084 60.000 0.00 0.00 0.00 3.06
49 50 1.218047 GGCACTACCGAGCACATCA 59.782 57.895 0.00 0.00 0.00 3.07
50 51 4.110493 GGCACTACCGAGCACATC 57.890 61.111 0.00 0.00 0.00 3.06
59 60 3.305881 GGTATGTAGATTCCGGCACTACC 60.306 52.174 20.89 11.90 36.62 3.18
60 61 3.319972 TGGTATGTAGATTCCGGCACTAC 59.680 47.826 18.62 18.62 37.55 2.73
61 62 3.568443 TGGTATGTAGATTCCGGCACTA 58.432 45.455 0.00 0.00 0.00 2.74
62 63 2.394632 TGGTATGTAGATTCCGGCACT 58.605 47.619 0.00 0.00 0.00 4.40
63 64 2.902705 TGGTATGTAGATTCCGGCAC 57.097 50.000 0.00 0.00 0.00 5.01
64 65 4.431416 AATTGGTATGTAGATTCCGGCA 57.569 40.909 0.00 0.00 0.00 5.69
65 66 4.578928 ACAAATTGGTATGTAGATTCCGGC 59.421 41.667 0.00 0.00 0.00 6.13
66 67 5.588648 ACACAAATTGGTATGTAGATTCCGG 59.411 40.000 0.00 0.00 0.00 5.14
67 68 6.315144 TGACACAAATTGGTATGTAGATTCCG 59.685 38.462 0.00 0.00 0.00 4.30
68 69 7.624360 TGACACAAATTGGTATGTAGATTCC 57.376 36.000 0.00 0.00 0.00 3.01
69 70 9.507280 CATTGACACAAATTGGTATGTAGATTC 57.493 33.333 0.00 0.00 0.00 2.52
70 71 7.975616 GCATTGACACAAATTGGTATGTAGATT 59.024 33.333 0.00 0.00 0.00 2.40
71 72 7.416664 GGCATTGACACAAATTGGTATGTAGAT 60.417 37.037 0.00 0.00 0.00 1.98
72 73 6.127758 GGCATTGACACAAATTGGTATGTAGA 60.128 38.462 0.00 0.00 0.00 2.59
73 74 6.035843 GGCATTGACACAAATTGGTATGTAG 58.964 40.000 0.00 0.00 0.00 2.74
74 75 5.478332 TGGCATTGACACAAATTGGTATGTA 59.522 36.000 0.00 0.00 0.00 2.29
75 76 4.282957 TGGCATTGACACAAATTGGTATGT 59.717 37.500 0.00 0.00 0.00 2.29
76 77 4.818642 TGGCATTGACACAAATTGGTATG 58.181 39.130 0.00 0.00 0.00 2.39
77 78 5.680594 ATGGCATTGACACAAATTGGTAT 57.319 34.783 0.00 0.00 0.00 2.73
78 79 5.126869 CCTATGGCATTGACACAAATTGGTA 59.873 40.000 4.78 0.00 0.00 3.25
79 80 4.081531 CCTATGGCATTGACACAAATTGGT 60.082 41.667 4.78 0.00 0.00 3.67
80 81 4.160065 TCCTATGGCATTGACACAAATTGG 59.840 41.667 4.78 0.00 0.00 3.16
81 82 5.105635 ACTCCTATGGCATTGACACAAATTG 60.106 40.000 4.78 0.00 0.00 2.32
82 83 5.018809 ACTCCTATGGCATTGACACAAATT 58.981 37.500 4.78 0.00 0.00 1.82
83 84 4.603131 ACTCCTATGGCATTGACACAAAT 58.397 39.130 4.78 0.00 0.00 2.32
84 85 4.009675 GACTCCTATGGCATTGACACAAA 58.990 43.478 4.78 0.00 0.00 2.83
85 86 3.008923 TGACTCCTATGGCATTGACACAA 59.991 43.478 4.78 0.00 0.00 3.33
86 87 2.571202 TGACTCCTATGGCATTGACACA 59.429 45.455 4.78 1.81 0.00 3.72
87 88 3.266510 TGACTCCTATGGCATTGACAC 57.733 47.619 4.78 0.00 0.00 3.67
88 89 3.998913 TTGACTCCTATGGCATTGACA 57.001 42.857 4.78 0.00 0.00 3.58
89 90 3.004106 GCATTGACTCCTATGGCATTGAC 59.996 47.826 4.78 0.00 0.00 3.18
90 91 3.216800 GCATTGACTCCTATGGCATTGA 58.783 45.455 4.78 2.02 0.00 2.57
91 92 2.295349 GGCATTGACTCCTATGGCATTG 59.705 50.000 4.78 3.02 45.40 2.82
92 93 2.590821 GGCATTGACTCCTATGGCATT 58.409 47.619 4.78 0.00 45.40 3.56
93 94 2.283145 GGCATTGACTCCTATGGCAT 57.717 50.000 4.88 4.88 45.40 4.40
94 95 3.806941 GGCATTGACTCCTATGGCA 57.193 52.632 0.00 0.00 45.40 4.92
95 96 1.312815 GTGGCATTGACTCCTATGGC 58.687 55.000 0.00 0.00 45.94 4.40
96 97 2.715749 TGTGGCATTGACTCCTATGG 57.284 50.000 0.00 0.00 0.00 2.74
97 98 3.812262 TCATGTGGCATTGACTCCTATG 58.188 45.455 0.00 0.00 0.00 2.23
98 99 4.164796 TCTTCATGTGGCATTGACTCCTAT 59.835 41.667 2.94 0.00 0.00 2.57
99 100 3.519107 TCTTCATGTGGCATTGACTCCTA 59.481 43.478 2.94 0.00 0.00 2.94
100 101 2.306805 TCTTCATGTGGCATTGACTCCT 59.693 45.455 2.94 0.00 0.00 3.69
101 102 2.715046 TCTTCATGTGGCATTGACTCC 58.285 47.619 2.94 0.00 0.00 3.85
102 103 3.755378 ACTTCTTCATGTGGCATTGACTC 59.245 43.478 2.94 0.00 0.00 3.36
103 104 3.504906 CACTTCTTCATGTGGCATTGACT 59.495 43.478 2.94 0.00 0.00 3.41
104 105 3.503363 TCACTTCTTCATGTGGCATTGAC 59.497 43.478 2.94 0.00 35.15 3.18
105 106 3.753815 TCACTTCTTCATGTGGCATTGA 58.246 40.909 0.00 0.00 35.15 2.57
106 107 3.754850 TCTCACTTCTTCATGTGGCATTG 59.245 43.478 0.00 0.00 35.15 2.82
107 108 3.755378 GTCTCACTTCTTCATGTGGCATT 59.245 43.478 0.00 0.00 35.15 3.56
108 109 3.244665 TGTCTCACTTCTTCATGTGGCAT 60.245 43.478 0.00 0.00 35.15 4.40
109 110 2.104622 TGTCTCACTTCTTCATGTGGCA 59.895 45.455 0.00 0.00 35.15 4.92
110 111 2.740981 CTGTCTCACTTCTTCATGTGGC 59.259 50.000 0.00 0.00 35.15 5.01
111 112 4.263018 TCTGTCTCACTTCTTCATGTGG 57.737 45.455 0.00 0.00 35.15 4.17
112 113 6.393171 TGTATCTGTCTCACTTCTTCATGTG 58.607 40.000 0.00 0.00 35.68 3.21
113 114 6.596309 TGTATCTGTCTCACTTCTTCATGT 57.404 37.500 0.00 0.00 0.00 3.21
114 115 7.816513 TCTTTGTATCTGTCTCACTTCTTCATG 59.183 37.037 0.00 0.00 0.00 3.07
115 116 7.901029 TCTTTGTATCTGTCTCACTTCTTCAT 58.099 34.615 0.00 0.00 0.00 2.57
116 117 7.290110 TCTTTGTATCTGTCTCACTTCTTCA 57.710 36.000 0.00 0.00 0.00 3.02
117 118 6.811170 CCTCTTTGTATCTGTCTCACTTCTTC 59.189 42.308 0.00 0.00 0.00 2.87
118 119 6.295575 CCCTCTTTGTATCTGTCTCACTTCTT 60.296 42.308 0.00 0.00 0.00 2.52
119 120 5.186797 CCCTCTTTGTATCTGTCTCACTTCT 59.813 44.000 0.00 0.00 0.00 2.85
120 121 5.415221 CCCTCTTTGTATCTGTCTCACTTC 58.585 45.833 0.00 0.00 0.00 3.01
121 122 4.223923 CCCCTCTTTGTATCTGTCTCACTT 59.776 45.833 0.00 0.00 0.00 3.16
122 123 3.772025 CCCCTCTTTGTATCTGTCTCACT 59.228 47.826 0.00 0.00 0.00 3.41
123 124 3.515901 ACCCCTCTTTGTATCTGTCTCAC 59.484 47.826 0.00 0.00 0.00 3.51
124 125 3.515502 CACCCCTCTTTGTATCTGTCTCA 59.484 47.826 0.00 0.00 0.00 3.27
125 126 3.769844 TCACCCCTCTTTGTATCTGTCTC 59.230 47.826 0.00 0.00 0.00 3.36
126 127 3.791320 TCACCCCTCTTTGTATCTGTCT 58.209 45.455 0.00 0.00 0.00 3.41
127 128 4.162320 TGATCACCCCTCTTTGTATCTGTC 59.838 45.833 0.00 0.00 0.00 3.51
128 129 4.104086 TGATCACCCCTCTTTGTATCTGT 58.896 43.478 0.00 0.00 0.00 3.41
129 130 4.760530 TGATCACCCCTCTTTGTATCTG 57.239 45.455 0.00 0.00 0.00 2.90
130 131 4.536090 TGTTGATCACCCCTCTTTGTATCT 59.464 41.667 0.00 0.00 0.00 1.98
131 132 4.843728 TGTTGATCACCCCTCTTTGTATC 58.156 43.478 0.00 0.00 0.00 2.24
132 133 4.927267 TGTTGATCACCCCTCTTTGTAT 57.073 40.909 0.00 0.00 0.00 2.29
133 134 4.927267 ATGTTGATCACCCCTCTTTGTA 57.073 40.909 0.00 0.00 0.00 2.41
134 135 3.814504 ATGTTGATCACCCCTCTTTGT 57.185 42.857 0.00 0.00 0.00 2.83
135 136 4.081406 TCAATGTTGATCACCCCTCTTTG 58.919 43.478 0.00 0.20 31.01 2.77
136 137 4.387026 TCAATGTTGATCACCCCTCTTT 57.613 40.909 0.00 0.00 31.01 2.52
137 138 4.598036 ATCAATGTTGATCACCCCTCTT 57.402 40.909 0.00 0.00 44.17 2.85
148 149 3.889815 GGTCCTGATGGATCAATGTTGA 58.110 45.455 0.00 0.00 45.29 3.18
156 157 2.171237 TGTCATGTGGTCCTGATGGATC 59.829 50.000 0.00 0.00 45.29 3.36
157 158 2.092753 GTGTCATGTGGTCCTGATGGAT 60.093 50.000 0.00 0.00 45.29 3.41
158 159 1.278985 GTGTCATGTGGTCCTGATGGA 59.721 52.381 0.00 0.00 40.69 3.41
159 160 1.280133 AGTGTCATGTGGTCCTGATGG 59.720 52.381 0.00 0.00 0.00 3.51
160 161 2.745821 CAAGTGTCATGTGGTCCTGATG 59.254 50.000 0.00 0.00 0.00 3.07
161 162 2.290514 CCAAGTGTCATGTGGTCCTGAT 60.291 50.000 0.00 0.00 0.00 2.90
162 163 1.072173 CCAAGTGTCATGTGGTCCTGA 59.928 52.381 0.00 0.00 0.00 3.86
163 164 1.072173 TCCAAGTGTCATGTGGTCCTG 59.928 52.381 0.00 0.00 33.88 3.86
164 165 1.072331 GTCCAAGTGTCATGTGGTCCT 59.928 52.381 0.00 0.00 33.88 3.85
165 166 1.523758 GTCCAAGTGTCATGTGGTCC 58.476 55.000 0.00 0.00 33.88 4.46
166 167 1.148310 CGTCCAAGTGTCATGTGGTC 58.852 55.000 0.00 0.05 33.88 4.02
167 168 0.468226 ACGTCCAAGTGTCATGTGGT 59.532 50.000 0.00 0.00 33.88 4.16
168 169 0.867746 CACGTCCAAGTGTCATGTGG 59.132 55.000 0.00 0.00 37.35 4.17
169 170 0.235665 GCACGTCCAAGTGTCATGTG 59.764 55.000 0.00 0.00 43.61 3.21
170 171 0.179059 TGCACGTCCAAGTGTCATGT 60.179 50.000 0.00 0.00 43.61 3.21
171 172 1.159285 ATGCACGTCCAAGTGTCATG 58.841 50.000 0.00 0.00 43.61 3.07
172 173 1.896220 AATGCACGTCCAAGTGTCAT 58.104 45.000 0.00 1.23 43.61 3.06
173 174 1.333308 CAAATGCACGTCCAAGTGTCA 59.667 47.619 0.00 0.00 43.61 3.58
174 175 1.334960 CCAAATGCACGTCCAAGTGTC 60.335 52.381 0.00 0.00 43.61 3.67
175 176 0.667993 CCAAATGCACGTCCAAGTGT 59.332 50.000 0.00 0.00 43.61 3.55
176 177 0.039256 CCCAAATGCACGTCCAAGTG 60.039 55.000 0.00 0.00 44.47 3.16
177 178 1.178534 CCCCAAATGCACGTCCAAGT 61.179 55.000 0.00 0.00 0.00 3.16
178 179 0.893270 TCCCCAAATGCACGTCCAAG 60.893 55.000 0.00 0.00 0.00 3.61
179 180 0.893270 CTCCCCAAATGCACGTCCAA 60.893 55.000 0.00 0.00 0.00 3.53
180 181 1.303236 CTCCCCAAATGCACGTCCA 60.303 57.895 0.00 0.00 0.00 4.02
181 182 0.394352 ATCTCCCCAAATGCACGTCC 60.394 55.000 0.00 0.00 0.00 4.79
182 183 0.734889 CATCTCCCCAAATGCACGTC 59.265 55.000 0.00 0.00 0.00 4.34
183 184 1.315257 GCATCTCCCCAAATGCACGT 61.315 55.000 0.00 0.00 45.97 4.49
184 185 1.434696 GCATCTCCCCAAATGCACG 59.565 57.895 0.00 0.00 45.97 5.34
187 188 0.903942 TTTGGCATCTCCCCAAATGC 59.096 50.000 1.72 0.00 44.90 3.56
191 192 5.513962 GGTTTTAAATTTGGCATCTCCCCAA 60.514 40.000 0.00 0.00 40.43 4.12
192 193 4.019771 GGTTTTAAATTTGGCATCTCCCCA 60.020 41.667 0.00 0.00 0.00 4.96
193 194 4.019771 TGGTTTTAAATTTGGCATCTCCCC 60.020 41.667 0.00 0.00 0.00 4.81
194 195 5.159273 TGGTTTTAAATTTGGCATCTCCC 57.841 39.130 0.00 0.00 0.00 4.30
195 196 8.785329 TTTATGGTTTTAAATTTGGCATCTCC 57.215 30.769 0.00 0.00 0.00 3.71
230 231 9.360901 TGAGCAACTATATCTCTGAAGTAGAAT 57.639 33.333 0.00 0.00 34.32 2.40
231 232 8.753497 TGAGCAACTATATCTCTGAAGTAGAA 57.247 34.615 0.00 0.00 34.32 2.10
232 233 8.791675 CATGAGCAACTATATCTCTGAAGTAGA 58.208 37.037 0.00 0.00 0.00 2.59
233 234 8.791675 TCATGAGCAACTATATCTCTGAAGTAG 58.208 37.037 0.00 0.00 0.00 2.57
234 235 8.697507 TCATGAGCAACTATATCTCTGAAGTA 57.302 34.615 0.00 0.00 0.00 2.24
235 236 7.594351 TCATGAGCAACTATATCTCTGAAGT 57.406 36.000 0.00 0.00 0.00 3.01
236 237 7.063662 GCATCATGAGCAACTATATCTCTGAAG 59.936 40.741 0.09 0.00 0.00 3.02
237 238 6.872547 GCATCATGAGCAACTATATCTCTGAA 59.127 38.462 0.09 0.00 0.00 3.02
238 239 6.396450 GCATCATGAGCAACTATATCTCTGA 58.604 40.000 0.09 0.00 0.00 3.27
239 240 5.581479 GGCATCATGAGCAACTATATCTCTG 59.419 44.000 15.83 0.35 0.00 3.35
240 241 5.484644 AGGCATCATGAGCAACTATATCTCT 59.515 40.000 15.83 1.51 0.00 3.10
241 242 5.732633 AGGCATCATGAGCAACTATATCTC 58.267 41.667 15.83 0.00 0.00 2.75
242 243 5.758790 AGGCATCATGAGCAACTATATCT 57.241 39.130 15.83 2.58 0.00 1.98
243 244 5.936372 TGAAGGCATCATGAGCAACTATATC 59.064 40.000 15.83 2.68 31.50 1.63
244 245 5.872963 TGAAGGCATCATGAGCAACTATAT 58.127 37.500 15.83 0.00 31.50 0.86
245 246 5.294734 TGAAGGCATCATGAGCAACTATA 57.705 39.130 15.83 0.00 31.50 1.31
246 247 4.160642 TGAAGGCATCATGAGCAACTAT 57.839 40.909 15.83 1.41 31.50 2.12
247 248 3.632643 TGAAGGCATCATGAGCAACTA 57.367 42.857 15.83 1.47 31.50 2.24
248 249 2.490903 GTTGAAGGCATCATGAGCAACT 59.509 45.455 15.83 3.54 38.03 3.16
249 250 2.490903 AGTTGAAGGCATCATGAGCAAC 59.509 45.455 15.83 14.00 38.03 4.17
250 251 2.490509 CAGTTGAAGGCATCATGAGCAA 59.509 45.455 15.83 5.15 38.03 3.91
251 252 2.089201 CAGTTGAAGGCATCATGAGCA 58.911 47.619 15.83 0.00 38.03 4.26
252 253 1.404391 CCAGTTGAAGGCATCATGAGC 59.596 52.381 0.09 5.10 38.03 4.26
253 254 2.719739 ACCAGTTGAAGGCATCATGAG 58.280 47.619 0.09 0.00 38.03 2.90
254 255 2.885135 ACCAGTTGAAGGCATCATGA 57.115 45.000 0.00 0.00 38.03 3.07
255 256 4.202080 CCATAACCAGTTGAAGGCATCATG 60.202 45.833 0.00 0.00 38.03 3.07
256 257 3.956199 CCATAACCAGTTGAAGGCATCAT 59.044 43.478 0.00 0.00 38.03 2.45
257 258 3.010027 TCCATAACCAGTTGAAGGCATCA 59.990 43.478 0.00 0.00 35.85 3.07
258 259 3.620488 TCCATAACCAGTTGAAGGCATC 58.380 45.455 0.00 0.00 0.00 3.91
259 260 3.737559 TCCATAACCAGTTGAAGGCAT 57.262 42.857 0.00 0.00 0.00 4.40
260 261 3.517296 TTCCATAACCAGTTGAAGGCA 57.483 42.857 0.00 0.00 0.00 4.75
261 262 4.142160 GGATTTCCATAACCAGTTGAAGGC 60.142 45.833 0.00 0.00 35.64 4.35
262 263 5.016173 TGGATTTCCATAACCAGTTGAAGG 58.984 41.667 0.00 0.00 42.01 3.46
263 264 6.588719 TTGGATTTCCATAACCAGTTGAAG 57.411 37.500 0.00 0.00 46.97 3.02
264 265 6.985653 TTTGGATTTCCATAACCAGTTGAA 57.014 33.333 0.00 0.00 46.97 2.69
265 266 6.553100 ACTTTTGGATTTCCATAACCAGTTGA 59.447 34.615 0.00 0.00 46.97 3.18
266 267 6.758254 ACTTTTGGATTTCCATAACCAGTTG 58.242 36.000 0.00 0.00 46.97 3.16
267 268 6.994421 ACTTTTGGATTTCCATAACCAGTT 57.006 33.333 0.00 0.00 46.97 3.16
268 269 7.363793 GCATACTTTTGGATTTCCATAACCAGT 60.364 37.037 0.00 0.01 46.97 4.00
269 270 6.980397 GCATACTTTTGGATTTCCATAACCAG 59.020 38.462 0.00 0.00 46.97 4.00
270 271 6.667414 AGCATACTTTTGGATTTCCATAACCA 59.333 34.615 0.00 0.00 46.97 3.67
271 272 7.112452 AGCATACTTTTGGATTTCCATAACC 57.888 36.000 0.00 0.00 46.97 2.85
272 273 7.771183 TGAGCATACTTTTGGATTTCCATAAC 58.229 34.615 0.00 0.00 46.97 1.89
273 274 7.953005 TGAGCATACTTTTGGATTTCCATAA 57.047 32.000 0.00 1.36 46.97 1.90
274 275 7.395772 TGTTGAGCATACTTTTGGATTTCCATA 59.604 33.333 0.00 0.00 46.97 2.74
275 276 6.211184 TGTTGAGCATACTTTTGGATTTCCAT 59.789 34.615 0.00 0.00 46.97 3.41
276 277 5.538053 TGTTGAGCATACTTTTGGATTTCCA 59.462 36.000 0.00 0.00 45.94 3.53
277 278 6.024552 TGTTGAGCATACTTTTGGATTTCC 57.975 37.500 0.00 0.00 0.00 3.13
278 279 7.315142 TGATGTTGAGCATACTTTTGGATTTC 58.685 34.615 0.00 0.00 38.06 2.17
279 280 7.230849 TGATGTTGAGCATACTTTTGGATTT 57.769 32.000 0.00 0.00 38.06 2.17
280 281 6.839124 TGATGTTGAGCATACTTTTGGATT 57.161 33.333 0.00 0.00 38.06 3.01
281 282 6.839124 TTGATGTTGAGCATACTTTTGGAT 57.161 33.333 0.00 0.00 38.06 3.41
282 283 6.265196 ACTTTGATGTTGAGCATACTTTTGGA 59.735 34.615 0.00 0.00 38.06 3.53
283 284 6.449698 ACTTTGATGTTGAGCATACTTTTGG 58.550 36.000 0.00 0.00 38.06 3.28
284 285 7.935338 AACTTTGATGTTGAGCATACTTTTG 57.065 32.000 0.00 0.00 38.06 2.44
285 286 8.947055 AAAACTTTGATGTTGAGCATACTTTT 57.053 26.923 0.00 0.00 38.06 2.27
286 287 8.819974 CAAAAACTTTGATGTTGAGCATACTTT 58.180 29.630 0.00 0.00 38.06 2.66
287 288 7.439056 CCAAAAACTTTGATGTTGAGCATACTT 59.561 33.333 0.69 0.00 38.06 2.24
288 289 6.925165 CCAAAAACTTTGATGTTGAGCATACT 59.075 34.615 0.69 0.00 38.06 2.12
289 290 6.346838 GCCAAAAACTTTGATGTTGAGCATAC 60.347 38.462 0.69 0.00 38.06 2.39
290 291 5.695816 GCCAAAAACTTTGATGTTGAGCATA 59.304 36.000 0.69 0.00 38.06 3.14
291 292 4.512571 GCCAAAAACTTTGATGTTGAGCAT 59.487 37.500 0.69 0.00 41.24 3.79
292 293 3.870419 GCCAAAAACTTTGATGTTGAGCA 59.130 39.130 0.69 0.00 0.00 4.26
293 294 4.025480 CAGCCAAAAACTTTGATGTTGAGC 60.025 41.667 0.69 0.00 0.00 4.26
294 295 4.508861 CCAGCCAAAAACTTTGATGTTGAG 59.491 41.667 0.69 0.00 0.00 3.02
295 296 4.081198 ACCAGCCAAAAACTTTGATGTTGA 60.081 37.500 0.69 0.00 0.00 3.18
296 297 4.190772 ACCAGCCAAAAACTTTGATGTTG 58.809 39.130 0.69 0.00 0.00 3.33
297 298 4.486125 ACCAGCCAAAAACTTTGATGTT 57.514 36.364 0.69 0.00 0.00 2.71
298 299 4.162131 AGAACCAGCCAAAAACTTTGATGT 59.838 37.500 0.69 0.00 0.00 3.06
299 300 4.696455 AGAACCAGCCAAAAACTTTGATG 58.304 39.130 0.69 0.36 0.00 3.07
300 301 5.357742 AAGAACCAGCCAAAAACTTTGAT 57.642 34.783 0.69 0.00 0.00 2.57
301 302 4.817318 AAGAACCAGCCAAAAACTTTGA 57.183 36.364 0.69 0.00 0.00 2.69
302 303 5.519927 CAGTAAGAACCAGCCAAAAACTTTG 59.480 40.000 0.00 0.00 0.00 2.77
303 304 5.395214 CCAGTAAGAACCAGCCAAAAACTTT 60.395 40.000 0.00 0.00 0.00 2.66
304 305 4.099419 CCAGTAAGAACCAGCCAAAAACTT 59.901 41.667 0.00 0.00 0.00 2.66
305 306 3.636764 CCAGTAAGAACCAGCCAAAAACT 59.363 43.478 0.00 0.00 0.00 2.66
306 307 3.798889 GCCAGTAAGAACCAGCCAAAAAC 60.799 47.826 0.00 0.00 0.00 2.43
307 308 2.364002 GCCAGTAAGAACCAGCCAAAAA 59.636 45.455 0.00 0.00 0.00 1.94
308 309 1.960689 GCCAGTAAGAACCAGCCAAAA 59.039 47.619 0.00 0.00 0.00 2.44
309 310 1.144913 AGCCAGTAAGAACCAGCCAAA 59.855 47.619 0.00 0.00 0.00 3.28
310 311 0.771127 AGCCAGTAAGAACCAGCCAA 59.229 50.000 0.00 0.00 0.00 4.52
311 312 0.036732 CAGCCAGTAAGAACCAGCCA 59.963 55.000 0.00 0.00 0.00 4.75
312 313 0.324943 TCAGCCAGTAAGAACCAGCC 59.675 55.000 0.00 0.00 0.00 4.85
313 314 1.443802 GTCAGCCAGTAAGAACCAGC 58.556 55.000 0.00 0.00 0.00 4.85
314 315 1.673033 CGGTCAGCCAGTAAGAACCAG 60.673 57.143 0.00 0.00 34.09 4.00
315 316 0.320374 CGGTCAGCCAGTAAGAACCA 59.680 55.000 0.00 0.00 34.09 3.67
316 317 0.606604 TCGGTCAGCCAGTAAGAACC 59.393 55.000 0.00 0.00 34.09 3.62
317 318 1.272769 AGTCGGTCAGCCAGTAAGAAC 59.727 52.381 0.00 0.00 34.09 3.01
318 319 1.544691 GAGTCGGTCAGCCAGTAAGAA 59.455 52.381 0.00 0.00 34.09 2.52
319 320 1.174783 GAGTCGGTCAGCCAGTAAGA 58.825 55.000 0.00 0.00 34.09 2.10
320 321 0.888619 TGAGTCGGTCAGCCAGTAAG 59.111 55.000 0.00 0.00 34.09 2.34
321 322 1.334160 TTGAGTCGGTCAGCCAGTAA 58.666 50.000 0.00 0.00 36.21 2.24
322 323 1.557099 ATTGAGTCGGTCAGCCAGTA 58.443 50.000 0.00 0.00 36.21 2.74
323 324 1.557099 TATTGAGTCGGTCAGCCAGT 58.443 50.000 0.00 0.00 36.21 4.00
324 325 2.101415 TGATATTGAGTCGGTCAGCCAG 59.899 50.000 0.00 0.00 36.21 4.85
325 326 2.101415 CTGATATTGAGTCGGTCAGCCA 59.899 50.000 0.00 0.00 36.21 4.75
326 327 2.546795 CCTGATATTGAGTCGGTCAGCC 60.547 54.545 7.83 0.00 36.21 4.85
327 328 2.362397 TCCTGATATTGAGTCGGTCAGC 59.638 50.000 7.83 0.00 36.21 4.26
328 329 4.142160 TGTTCCTGATATTGAGTCGGTCAG 60.142 45.833 6.82 6.82 36.21 3.51
329 330 3.767131 TGTTCCTGATATTGAGTCGGTCA 59.233 43.478 0.00 0.00 0.00 4.02
330 331 4.386867 TGTTCCTGATATTGAGTCGGTC 57.613 45.455 0.00 0.00 0.00 4.79
331 332 4.697514 CATGTTCCTGATATTGAGTCGGT 58.302 43.478 0.00 0.00 0.00 4.69
332 333 3.496130 GCATGTTCCTGATATTGAGTCGG 59.504 47.826 0.00 0.00 0.00 4.79
333 334 4.375272 AGCATGTTCCTGATATTGAGTCG 58.625 43.478 0.00 0.00 0.00 4.18
334 335 5.363101 TGAGCATGTTCCTGATATTGAGTC 58.637 41.667 7.13 0.00 0.00 3.36
335 336 5.129980 TCTGAGCATGTTCCTGATATTGAGT 59.870 40.000 7.13 0.00 0.00 3.41
336 337 5.608449 TCTGAGCATGTTCCTGATATTGAG 58.392 41.667 7.13 0.00 0.00 3.02
337 338 5.619132 TCTGAGCATGTTCCTGATATTGA 57.381 39.130 7.13 0.00 0.00 2.57
338 339 6.053650 TCTTCTGAGCATGTTCCTGATATTG 58.946 40.000 7.13 0.00 0.00 1.90
339 340 6.244552 TCTTCTGAGCATGTTCCTGATATT 57.755 37.500 7.13 0.00 0.00 1.28
340 341 5.883685 TCTTCTGAGCATGTTCCTGATAT 57.116 39.130 7.13 0.00 0.00 1.63
341 342 5.423290 TCTTCTTCTGAGCATGTTCCTGATA 59.577 40.000 7.13 0.00 0.00 2.15
342 343 4.224594 TCTTCTTCTGAGCATGTTCCTGAT 59.775 41.667 7.13 0.00 0.00 2.90
343 344 3.580022 TCTTCTTCTGAGCATGTTCCTGA 59.420 43.478 7.13 2.95 0.00 3.86
344 345 3.683822 GTCTTCTTCTGAGCATGTTCCTG 59.316 47.826 7.13 0.53 0.00 3.86
345 346 3.326006 TGTCTTCTTCTGAGCATGTTCCT 59.674 43.478 7.13 0.00 0.00 3.36
346 347 3.434984 GTGTCTTCTTCTGAGCATGTTCC 59.565 47.826 7.13 0.00 0.00 3.62
347 348 4.314121 AGTGTCTTCTTCTGAGCATGTTC 58.686 43.478 2.05 2.05 0.00 3.18
348 349 4.348863 AGTGTCTTCTTCTGAGCATGTT 57.651 40.909 0.00 0.00 0.00 2.71
349 350 4.281941 TGTAGTGTCTTCTTCTGAGCATGT 59.718 41.667 0.00 0.00 0.00 3.21
350 351 4.814147 TGTAGTGTCTTCTTCTGAGCATG 58.186 43.478 0.00 0.00 0.00 4.06
351 352 5.474578 TTGTAGTGTCTTCTTCTGAGCAT 57.525 39.130 0.00 0.00 0.00 3.79
352 353 4.937201 TTGTAGTGTCTTCTTCTGAGCA 57.063 40.909 0.00 0.00 0.00 4.26
353 354 6.529829 CAGTATTGTAGTGTCTTCTTCTGAGC 59.470 42.308 0.00 0.00 0.00 4.26
354 355 7.032580 CCAGTATTGTAGTGTCTTCTTCTGAG 58.967 42.308 0.00 0.00 0.00 3.35
355 356 6.719829 TCCAGTATTGTAGTGTCTTCTTCTGA 59.280 38.462 0.00 0.00 0.00 3.27
356 357 6.925211 TCCAGTATTGTAGTGTCTTCTTCTG 58.075 40.000 0.00 0.00 0.00 3.02
357 358 7.540474 TTCCAGTATTGTAGTGTCTTCTTCT 57.460 36.000 0.00 0.00 0.00 2.85
358 359 7.656137 TGTTTCCAGTATTGTAGTGTCTTCTTC 59.344 37.037 0.00 0.00 0.00 2.87
359 360 7.506114 TGTTTCCAGTATTGTAGTGTCTTCTT 58.494 34.615 0.00 0.00 0.00 2.52
360 361 7.062749 TGTTTCCAGTATTGTAGTGTCTTCT 57.937 36.000 0.00 0.00 0.00 2.85
361 362 7.724305 TTGTTTCCAGTATTGTAGTGTCTTC 57.276 36.000 0.00 0.00 0.00 2.87
362 363 8.157476 AGATTGTTTCCAGTATTGTAGTGTCTT 58.843 33.333 0.00 0.00 0.00 3.01
363 364 7.680730 AGATTGTTTCCAGTATTGTAGTGTCT 58.319 34.615 0.00 0.00 0.00 3.41
364 365 7.907214 AGATTGTTTCCAGTATTGTAGTGTC 57.093 36.000 0.00 0.00 0.00 3.67
365 366 8.812972 TCTAGATTGTTTCCAGTATTGTAGTGT 58.187 33.333 0.00 0.00 0.00 3.55
366 367 9.088512 GTCTAGATTGTTTCCAGTATTGTAGTG 57.911 37.037 0.00 0.00 0.00 2.74
367 368 9.036980 AGTCTAGATTGTTTCCAGTATTGTAGT 57.963 33.333 0.00 0.00 0.00 2.73
370 371 8.258708 GGTAGTCTAGATTGTTTCCAGTATTGT 58.741 37.037 0.00 0.00 0.00 2.71
371 372 8.478877 AGGTAGTCTAGATTGTTTCCAGTATTG 58.521 37.037 0.00 0.00 0.00 1.90
372 373 8.478877 CAGGTAGTCTAGATTGTTTCCAGTATT 58.521 37.037 0.00 0.00 0.00 1.89
373 374 7.418025 GCAGGTAGTCTAGATTGTTTCCAGTAT 60.418 40.741 0.00 0.00 0.00 2.12
374 375 6.127423 GCAGGTAGTCTAGATTGTTTCCAGTA 60.127 42.308 0.00 0.00 0.00 2.74
375 376 5.337652 GCAGGTAGTCTAGATTGTTTCCAGT 60.338 44.000 0.00 0.00 0.00 4.00
376 377 5.105146 AGCAGGTAGTCTAGATTGTTTCCAG 60.105 44.000 0.00 0.00 0.00 3.86
377 378 4.777896 AGCAGGTAGTCTAGATTGTTTCCA 59.222 41.667 0.00 0.00 0.00 3.53
378 379 5.346181 AGCAGGTAGTCTAGATTGTTTCC 57.654 43.478 0.00 0.00 0.00 3.13
379 380 7.436673 CACATAGCAGGTAGTCTAGATTGTTTC 59.563 40.741 0.00 0.00 0.00 2.78
380 381 7.268586 CACATAGCAGGTAGTCTAGATTGTTT 58.731 38.462 0.00 0.00 0.00 2.83
381 382 6.183360 CCACATAGCAGGTAGTCTAGATTGTT 60.183 42.308 0.00 0.00 0.00 2.83
382 383 5.303078 CCACATAGCAGGTAGTCTAGATTGT 59.697 44.000 0.00 0.00 0.00 2.71
383 384 5.536538 TCCACATAGCAGGTAGTCTAGATTG 59.463 44.000 0.00 0.00 0.00 2.67
384 385 5.706447 TCCACATAGCAGGTAGTCTAGATT 58.294 41.667 0.00 0.00 0.00 2.40
385 386 5.326283 TCCACATAGCAGGTAGTCTAGAT 57.674 43.478 0.00 0.00 0.00 1.98
386 387 4.790718 TCCACATAGCAGGTAGTCTAGA 57.209 45.455 0.00 0.00 0.00 2.43
387 388 6.004574 TGTATCCACATAGCAGGTAGTCTAG 58.995 44.000 0.00 0.00 0.00 2.43
388 389 5.768662 GTGTATCCACATAGCAGGTAGTCTA 59.231 44.000 0.00 0.00 41.44 2.59
389 390 4.585162 GTGTATCCACATAGCAGGTAGTCT 59.415 45.833 0.00 0.00 41.44 3.24
390 391 4.585162 AGTGTATCCACATAGCAGGTAGTC 59.415 45.833 0.00 0.00 44.39 2.59
391 392 4.342378 CAGTGTATCCACATAGCAGGTAGT 59.658 45.833 0.00 0.00 44.39 2.73
392 393 4.262207 CCAGTGTATCCACATAGCAGGTAG 60.262 50.000 0.00 0.00 44.39 3.18
393 394 3.641436 CCAGTGTATCCACATAGCAGGTA 59.359 47.826 0.00 0.00 44.39 3.08
394 395 2.435805 CCAGTGTATCCACATAGCAGGT 59.564 50.000 0.00 0.00 44.39 4.00
395 396 2.808202 GCCAGTGTATCCACATAGCAGG 60.808 54.545 0.00 0.00 44.39 4.85
396 397 2.487934 GCCAGTGTATCCACATAGCAG 58.512 52.381 0.00 0.00 44.39 4.24
397 398 1.140852 GGCCAGTGTATCCACATAGCA 59.859 52.381 0.00 0.00 44.39 3.49
398 399 1.417890 AGGCCAGTGTATCCACATAGC 59.582 52.381 5.01 0.00 44.39 2.97
399 400 3.845781 AAGGCCAGTGTATCCACATAG 57.154 47.619 5.01 0.00 44.39 2.23
400 401 3.118038 GGAAAGGCCAGTGTATCCACATA 60.118 47.826 5.01 0.00 44.39 2.29
401 402 2.357154 GGAAAGGCCAGTGTATCCACAT 60.357 50.000 5.01 0.00 44.39 3.21
402 403 1.004277 GGAAAGGCCAGTGTATCCACA 59.996 52.381 5.01 0.00 44.39 4.17
403 404 1.282157 AGGAAAGGCCAGTGTATCCAC 59.718 52.381 5.01 0.00 42.17 4.02
404 405 1.668826 AGGAAAGGCCAGTGTATCCA 58.331 50.000 5.01 0.00 40.02 3.41
405 406 2.158798 GGTAGGAAAGGCCAGTGTATCC 60.159 54.545 5.01 2.79 40.02 2.59
406 407 2.772515 AGGTAGGAAAGGCCAGTGTATC 59.227 50.000 5.01 0.00 40.02 2.24
407 408 2.846950 AGGTAGGAAAGGCCAGTGTAT 58.153 47.619 5.01 0.00 40.02 2.29
408 409 2.337359 AGGTAGGAAAGGCCAGTGTA 57.663 50.000 5.01 0.00 40.02 2.90
409 410 1.446016 AAGGTAGGAAAGGCCAGTGT 58.554 50.000 5.01 0.00 40.02 3.55
410 411 2.586648 AAAGGTAGGAAAGGCCAGTG 57.413 50.000 5.01 0.00 40.02 3.66
411 412 2.225041 GGAAAAGGTAGGAAAGGCCAGT 60.225 50.000 5.01 0.00 40.02 4.00
412 413 2.225017 TGGAAAAGGTAGGAAAGGCCAG 60.225 50.000 5.01 0.00 40.02 4.85
413 414 1.783979 TGGAAAAGGTAGGAAAGGCCA 59.216 47.619 5.01 0.00 40.02 5.36
414 415 2.597578 TGGAAAAGGTAGGAAAGGCC 57.402 50.000 0.00 0.00 0.00 5.19
415 416 3.832490 ACAATGGAAAAGGTAGGAAAGGC 59.168 43.478 0.00 0.00 0.00 4.35
416 417 4.156008 CGACAATGGAAAAGGTAGGAAAGG 59.844 45.833 0.00 0.00 0.00 3.11
417 418 5.001232 TCGACAATGGAAAAGGTAGGAAAG 58.999 41.667 0.00 0.00 0.00 2.62
476 477 2.289072 GCACAACTCTGCTCCTCTGTAA 60.289 50.000 0.00 0.00 34.06 2.41
477 478 1.273606 GCACAACTCTGCTCCTCTGTA 59.726 52.381 0.00 0.00 34.06 2.74
567 568 1.078848 CCTGGAGGCTTTGACGGAG 60.079 63.158 0.00 0.00 0.00 4.63
572 573 0.185901 AGCAAACCTGGAGGCTTTGA 59.814 50.000 17.70 0.00 37.88 2.69
684 909 4.428209 GACAGAGACTGGTGTATGTCATG 58.572 47.826 16.83 0.00 35.79 3.07
829 1054 1.576757 TGGACCATGGTAGGTAGGCTA 59.423 52.381 19.80 0.00 43.38 3.93
852 1081 2.272471 GAGTAGGTTGGGGCTGGC 59.728 66.667 0.00 0.00 0.00 4.85
863 1092 1.445582 GTTGGACGCGTGGAGTAGG 60.446 63.158 20.70 0.00 0.00 3.18
1473 1710 2.799371 GAGAGGTACGCCGTCCTG 59.201 66.667 11.99 0.00 40.50 3.86
1740 1977 9.877178 ATAAGAGTCTGACACCTTAATTACAAG 57.123 33.333 19.28 0.00 0.00 3.16
1868 2525 7.498900 TGTCAAAGTGATTTATATTCGGCAGAT 59.501 33.333 0.00 0.00 0.00 2.90
1869 2526 6.821160 TGTCAAAGTGATTTATATTCGGCAGA 59.179 34.615 0.00 0.00 0.00 4.26
1872 2529 8.345565 AGAATGTCAAAGTGATTTATATTCGGC 58.654 33.333 0.00 0.00 0.00 5.54
1879 2536 9.768662 AAAGCAAAGAATGTCAAAGTGATTTAT 57.231 25.926 0.00 0.00 0.00 1.40
1886 2543 5.464389 GCATGAAAGCAAAGAATGTCAAAGT 59.536 36.000 0.00 0.00 0.00 2.66
1935 2592 9.337396 ACAGCAACAATTAATATTAATCGGAGA 57.663 29.630 18.72 0.00 45.75 3.71
1971 2628 5.105432 ACTCCTTCCGATCCTAAAGTTGTAC 60.105 44.000 0.00 0.00 0.00 2.90
1972 2629 5.021458 ACTCCTTCCGATCCTAAAGTTGTA 58.979 41.667 0.00 0.00 0.00 2.41
1973 2630 3.838903 ACTCCTTCCGATCCTAAAGTTGT 59.161 43.478 0.00 0.00 0.00 3.32
1974 2631 4.473477 ACTCCTTCCGATCCTAAAGTTG 57.527 45.455 0.00 0.00 0.00 3.16
1975 2632 5.270794 ACTACTCCTTCCGATCCTAAAGTT 58.729 41.667 0.00 0.00 0.00 2.66
1977 2634 6.297582 TCTACTACTCCTTCCGATCCTAAAG 58.702 44.000 0.00 0.00 0.00 1.85
1979 2636 5.901413 TCTACTACTCCTTCCGATCCTAA 57.099 43.478 0.00 0.00 0.00 2.69
1985 2642 9.887629 CTGTATAATATCTACTACTCCTTCCGA 57.112 37.037 0.00 0.00 0.00 4.55
1986 2643 9.111613 CCTGTATAATATCTACTACTCCTTCCG 57.888 40.741 0.00 0.00 0.00 4.30
2036 2694 7.526608 TGGTCGTAAATGCAAAATAGAAAGAG 58.473 34.615 0.00 0.00 0.00 2.85
2047 2710 6.018589 TGAATTCAATGGTCGTAAATGCAA 57.981 33.333 5.45 0.00 0.00 4.08
2069 2732 5.399301 CGGTTGAACAAAGATTAGCTGTTTG 59.601 40.000 0.00 3.88 42.34 2.93
2080 2743 5.568685 TTCAATCAACGGTTGAACAAAGA 57.431 34.783 25.64 15.84 43.95 2.52
2193 3024 8.469200 CCACTTGGTGAAACATATCATAAATGT 58.531 33.333 0.00 0.00 39.98 2.71
2328 3163 6.024552 TGAAGGCACCATCAACTATTTTTC 57.975 37.500 0.00 0.00 0.00 2.29
2346 3181 6.292150 GGAACATAGGGAGTAGATTTGAAGG 58.708 44.000 0.00 0.00 0.00 3.46
2351 3186 9.860393 ATATTAGGGAACATAGGGAGTAGATTT 57.140 33.333 0.00 0.00 0.00 2.17
2447 3503 7.672240 TGGAAACCAATTAATTTGTTACTCCC 58.328 34.615 21.68 17.32 33.15 4.30
2461 3517 7.614494 CCACTCTTTTATGATGGAAACCAATT 58.386 34.615 0.00 0.00 36.95 2.32
2471 3527 8.877779 GCTATATACTGCCACTCTTTTATGATG 58.122 37.037 0.00 0.00 0.00 3.07
2533 3589 5.860941 TCCAAAACAGAACCTTTTATGCA 57.139 34.783 0.00 0.00 0.00 3.96
2547 3603 8.432805 TGCCCTTTTCTAAATTATTCCAAAACA 58.567 29.630 0.00 0.00 0.00 2.83
2669 3725 1.277842 TGACAGGGTACATTCACGCAT 59.722 47.619 0.00 0.00 34.01 4.73
2671 3727 1.803334 TTGACAGGGTACATTCACGC 58.197 50.000 0.00 0.00 0.00 5.34
2676 3732 3.614092 CTGAGCATTGACAGGGTACATT 58.386 45.455 0.00 0.00 0.00 2.71
2678 3734 1.278985 CCTGAGCATTGACAGGGTACA 59.721 52.381 17.11 0.00 46.76 2.90
2688 3744 2.099062 GAACGCGCCTGAGCATTG 59.901 61.111 5.73 0.00 39.83 2.82
2690 3746 4.742201 ACGAACGCGCCTGAGCAT 62.742 61.111 5.73 0.00 42.48 3.79
2695 3751 1.206578 ATCAAAACGAACGCGCCTG 59.793 52.632 5.73 0.00 42.48 4.85
2696 3752 3.650369 ATCAAAACGAACGCGCCT 58.350 50.000 5.73 0.00 42.48 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.