Multiple sequence alignment - TraesCS4D01G309400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G309400 chr4D 100.000 4524 0 0 1 4524 477097768 477102291 0.000000e+00 8355.0
1 TraesCS4D01G309400 chr4D 97.674 43 0 1 4283 4324 477102012 477102054 6.280000e-09 73.1
2 TraesCS4D01G309400 chr4D 97.674 43 0 1 4245 4287 477102050 477102091 6.280000e-09 73.1
3 TraesCS4D01G309400 chr4A 90.995 2965 167 50 767 3665 683873834 683876764 0.000000e+00 3904.0
4 TraesCS4D01G309400 chr4B 91.348 1306 77 20 776 2057 601513083 601514376 0.000000e+00 1753.0
5 TraesCS4D01G309400 chr4B 90.864 1018 65 15 2696 3699 601515744 601516747 0.000000e+00 1339.0
6 TraesCS4D01G309400 chr4B 93.631 628 30 4 2054 2677 601514844 601515465 0.000000e+00 929.0
7 TraesCS4D01G309400 chr4B 89.899 99 8 2 3824 3922 601516955 601517051 4.750000e-25 126.0
8 TraesCS4D01G309400 chr4B 79.452 146 7 3 4392 4524 601517838 601517973 1.040000e-11 82.4
9 TraesCS4D01G309400 chr3B 81.305 797 109 29 1 768 327060955 327060170 1.080000e-170 610.0
10 TraesCS4D01G309400 chr1B 76.937 555 114 13 217 765 463668590 463668044 2.040000e-78 303.0
11 TraesCS4D01G309400 chr1B 75.616 365 74 13 407 765 463833846 463834201 2.800000e-37 167.0
12 TraesCS4D01G309400 chr5B 89.474 57 2 2 709 763 84922947 84922893 8.120000e-08 69.4
13 TraesCS4D01G309400 chr1D 90.741 54 1 2 709 760 409096457 409096406 8.120000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G309400 chr4D 477097768 477102291 4523 False 2833.733333 8355 98.449333 1 4524 3 chr4D.!!$F1 4523
1 TraesCS4D01G309400 chr4A 683873834 683876764 2930 False 3904.000000 3904 90.995000 767 3665 1 chr4A.!!$F1 2898
2 TraesCS4D01G309400 chr4B 601513083 601517973 4890 False 845.880000 1753 89.038800 776 4524 5 chr4B.!!$F1 3748
3 TraesCS4D01G309400 chr3B 327060170 327060955 785 True 610.000000 610 81.305000 1 768 1 chr3B.!!$R1 767
4 TraesCS4D01G309400 chr1B 463668044 463668590 546 True 303.000000 303 76.937000 217 765 1 chr1B.!!$R1 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
439 441 0.108992 TACTGTCATCGGGCGTCAAC 60.109 55.0 0.0 0.0 0.00 3.18 F
515 517 0.179001 AACTGGTGTGGGCTTGTACC 60.179 55.0 0.0 0.0 0.00 3.34 F
1680 1759 0.537143 ATTGCCGTTGCTGAACCAGA 60.537 50.0 0.0 0.0 38.71 3.86 F
2315 2876 0.179067 AGGGTTCGACGCTTCAACAA 60.179 50.0 0.0 0.0 38.28 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2243 2804 0.035152 TGGAAGCTGCATCCGACATT 60.035 50.0 17.99 0.00 39.98 2.71 R
2244 2805 0.182061 ATGGAAGCTGCATCCGACAT 59.818 50.0 17.99 4.61 39.98 3.06 R
3494 4331 0.468029 CCAGTGCCAAGTGGTTTCCT 60.468 55.0 0.00 0.00 41.43 3.36 R
3979 4968 0.107410 TTGCACCTGTTGGTCGTCTT 60.107 50.0 0.00 0.00 46.60 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.585289 TCTTCAGTGGTTAACATGCCCTA 59.415 43.478 8.10 0.00 0.00 3.53
29 30 2.174854 AGTGGTTAACATGCCCTATCCC 59.825 50.000 8.10 0.00 0.00 3.85
38 39 1.823899 GCCCTATCCCAAGTTGGCG 60.824 63.158 17.07 9.98 35.79 5.69
54 55 4.098807 AGTTGGCGTTGAAATACTTTGGTT 59.901 37.500 0.00 0.00 0.00 3.67
69 70 5.168526 CTTTGGTTCGTTCAAAGTCATCA 57.831 39.130 14.74 0.00 43.42 3.07
85 86 3.676646 GTCATCACAAAAATTGGAGCTGC 59.323 43.478 0.00 0.00 34.12 5.25
86 87 2.420628 TCACAAAAATTGGAGCTGCG 57.579 45.000 0.00 0.00 34.12 5.18
98 99 4.847255 GCTGCGGCTTACAAACTG 57.153 55.556 11.21 0.00 35.22 3.16
104 105 3.413327 TGCGGCTTACAAACTGGAATTA 58.587 40.909 0.00 0.00 0.00 1.40
119 120 5.068215 TGGAATTACCCAAAGGAAGTCAA 57.932 39.130 0.00 0.00 38.00 3.18
120 121 5.459505 TGGAATTACCCAAAGGAAGTCAAA 58.540 37.500 0.00 0.00 38.00 2.69
123 124 7.730784 TGGAATTACCCAAAGGAAGTCAAATTA 59.269 33.333 0.00 0.00 38.00 1.40
128 129 7.232118 ACCCAAAGGAAGTCAAATTAATCTG 57.768 36.000 0.00 0.00 36.73 2.90
134 135 7.839680 AGGAAGTCAAATTAATCTGGTGTTT 57.160 32.000 0.00 0.00 0.00 2.83
143 144 8.517878 CAAATTAATCTGGTGTTTCATGTCTCT 58.482 33.333 0.00 0.00 0.00 3.10
148 149 6.358974 TCTGGTGTTTCATGTCTCTCAATA 57.641 37.500 0.00 0.00 0.00 1.90
152 153 7.223584 TGGTGTTTCATGTCTCTCAATAGAAA 58.776 34.615 0.00 0.00 0.00 2.52
155 156 8.939929 GTGTTTCATGTCTCTCAATAGAAATCA 58.060 33.333 0.00 0.00 32.50 2.57
189 190 1.737838 CACACCAGTGTTCACAGTGT 58.262 50.000 18.89 18.89 43.85 3.55
191 192 3.266636 CACACCAGTGTTCACAGTGTTA 58.733 45.455 20.76 0.00 43.85 2.41
194 195 1.864711 CCAGTGTTCACAGTGTTACCG 59.135 52.381 12.71 0.00 43.85 4.02
197 198 3.619483 CAGTGTTCACAGTGTTACCGAAA 59.381 43.478 6.61 0.00 41.23 3.46
199 200 3.619929 GTGTTCACAGTGTTACCGAAACT 59.380 43.478 0.00 0.00 38.99 2.66
212 213 6.311935 TGTTACCGAAACTTCTGGATTTATCG 59.688 38.462 7.15 0.00 38.99 2.92
215 216 4.634443 CCGAAACTTCTGGATTTATCGGTT 59.366 41.667 0.00 0.00 42.58 4.44
221 222 2.341846 TGGATTTATCGGTTCCAGGC 57.658 50.000 0.00 0.00 34.65 4.85
227 228 1.184431 TATCGGTTCCAGGCGTGTTA 58.816 50.000 5.57 0.00 0.00 2.41
247 248 5.483937 TGTTACCTGAACAGATACTGGACAT 59.516 40.000 3.19 0.00 43.30 3.06
248 249 4.478206 ACCTGAACAGATACTGGACATG 57.522 45.455 3.19 0.00 35.51 3.21
251 252 1.594862 GAACAGATACTGGACATGCGC 59.405 52.381 0.00 0.00 35.51 6.09
266 267 0.465460 TGCGCTTGGTCAAGAAAGGT 60.465 50.000 9.73 0.00 40.79 3.50
275 276 2.084546 GTCAAGAAAGGTAATGCGGCT 58.915 47.619 0.00 0.00 0.00 5.52
284 285 1.534595 GGTAATGCGGCTCATTTGCAG 60.535 52.381 8.15 0.00 42.48 4.41
287 288 0.394216 ATGCGGCTCATTTGCAGGTA 60.394 50.000 0.00 0.00 42.65 3.08
319 320 2.161030 GACTTCGGTACCAGAGTCAGT 58.839 52.381 27.48 18.26 0.00 3.41
320 321 3.341823 GACTTCGGTACCAGAGTCAGTA 58.658 50.000 27.48 6.59 0.00 2.74
338 339 6.097129 AGTCAGTAGCTACTTGGGAAGATTAC 59.903 42.308 23.94 10.32 33.46 1.89
345 346 3.939066 ACTTGGGAAGATTACGAAGTGG 58.061 45.455 4.59 0.00 45.73 4.00
361 362 1.234821 GTGGTCAAAGCACGATTCCA 58.765 50.000 0.00 0.00 36.84 3.53
362 363 1.812571 GTGGTCAAAGCACGATTCCAT 59.187 47.619 0.00 0.00 36.84 3.41
398 400 2.069776 CCAGCTGGTTCTCAAGGGA 58.930 57.895 25.53 0.00 0.00 4.20
413 415 0.779997 AGGGAAGGGCAATGTCAGTT 59.220 50.000 0.00 0.00 0.00 3.16
415 417 1.546029 GGGAAGGGCAATGTCAGTTTC 59.454 52.381 0.00 0.00 0.00 2.78
429 431 3.854809 GTCAGTTTCGAGCTACTGTCATC 59.145 47.826 18.11 8.68 41.87 2.92
430 432 2.848887 CAGTTTCGAGCTACTGTCATCG 59.151 50.000 13.27 3.65 37.56 3.84
439 441 0.108992 TACTGTCATCGGGCGTCAAC 60.109 55.000 0.00 0.00 0.00 3.18
451 453 2.325082 CGTCAACCAAGGCGGAAGG 61.325 63.158 0.00 0.00 38.63 3.46
465 467 2.160813 GCGGAAGGCGTATTCAAAAGAA 59.839 45.455 4.51 0.00 0.00 2.52
470 472 5.411669 GGAAGGCGTATTCAAAAGAAGAAGA 59.588 40.000 4.51 0.00 0.00 2.87
479 481 8.985805 GTATTCAAAAGAAGAAGACGTAAAGGA 58.014 33.333 0.00 0.00 29.05 3.36
480 482 7.852971 TTCAAAAGAAGAAGACGTAAAGGAA 57.147 32.000 0.00 0.00 0.00 3.36
494 496 2.046217 GGAAGTGGCGGGAGGTTC 60.046 66.667 0.00 0.00 0.00 3.62
498 500 2.726822 AAGTGGCGGGAGGTTCGAAC 62.727 60.000 20.14 20.14 0.00 3.95
499 501 2.920912 TGGCGGGAGGTTCGAACT 60.921 61.111 26.32 13.35 0.00 3.01
501 503 2.434359 GCGGGAGGTTCGAACTGG 60.434 66.667 26.32 12.74 0.00 4.00
503 505 1.374252 CGGGAGGTTCGAACTGGTG 60.374 63.158 26.32 10.31 0.00 4.17
504 506 1.752833 GGGAGGTTCGAACTGGTGT 59.247 57.895 26.32 7.66 0.00 4.16
506 508 0.602905 GGAGGTTCGAACTGGTGTGG 60.603 60.000 26.32 0.00 0.00 4.17
508 510 2.258726 GGTTCGAACTGGTGTGGGC 61.259 63.158 26.32 4.07 0.00 5.36
511 513 0.817634 TTCGAACTGGTGTGGGCTTG 60.818 55.000 0.00 0.00 0.00 4.01
512 514 1.525995 CGAACTGGTGTGGGCTTGT 60.526 57.895 0.00 0.00 0.00 3.16
514 516 1.235724 GAACTGGTGTGGGCTTGTAC 58.764 55.000 0.00 0.00 0.00 2.90
515 517 0.179001 AACTGGTGTGGGCTTGTACC 60.179 55.000 0.00 0.00 0.00 3.34
516 518 1.671054 CTGGTGTGGGCTTGTACCG 60.671 63.158 0.00 0.00 35.98 4.02
517 519 3.053896 GGTGTGGGCTTGTACCGC 61.054 66.667 0.00 0.00 38.95 5.68
527 529 3.166490 TTGTACCGCGTGGGCTTGA 62.166 57.895 21.14 0.00 40.62 3.02
547 549 4.830765 GCGTGTAGCGGGCCATGA 62.831 66.667 4.39 0.00 41.69 3.07
563 565 2.418609 CCATGAGCCGTGTGTAATGAGA 60.419 50.000 0.00 0.00 0.00 3.27
565 567 3.610040 TGAGCCGTGTGTAATGAGAAT 57.390 42.857 0.00 0.00 0.00 2.40
581 585 9.868277 GTAATGAGAATAGCATATAAGCTGACT 57.132 33.333 12.62 8.49 46.11 3.41
589 593 2.263895 TATAAGCTGACTGTGGGGGT 57.736 50.000 0.00 0.00 0.00 4.95
604 608 4.090588 GGTCCGTTCGGGGCATCA 62.091 66.667 11.37 0.00 44.60 3.07
612 616 2.795681 CGTTCGGGGCATCATTGAAATG 60.796 50.000 0.00 0.00 37.75 2.32
619 623 4.818005 GGGGCATCATTGAAATGGAAATTC 59.182 41.667 3.31 0.00 37.03 2.17
640 644 9.474920 AAATTCGAATTCTAGCTTATCTCTCTG 57.525 33.333 22.93 0.00 0.00 3.35
641 645 7.809546 TTCGAATTCTAGCTTATCTCTCTGA 57.190 36.000 3.52 0.00 0.00 3.27
642 646 7.433708 TCGAATTCTAGCTTATCTCTCTGAG 57.566 40.000 3.52 0.00 0.00 3.35
643 647 6.072728 TCGAATTCTAGCTTATCTCTCTGAGC 60.073 42.308 3.52 0.00 35.42 4.26
644 648 6.072508 CGAATTCTAGCTTATCTCTCTGAGCT 60.073 42.308 3.52 2.10 46.40 4.09
652 656 5.049129 GCTTATCTCTCTGAGCTTCTCTCTC 60.049 48.000 0.00 0.00 42.38 3.20
654 658 5.894298 ATCTCTCTGAGCTTCTCTCTCTA 57.106 43.478 0.00 0.00 42.38 2.43
657 661 4.631131 TCTCTGAGCTTCTCTCTCTATCG 58.369 47.826 0.00 0.00 42.38 2.92
658 662 4.100963 TCTCTGAGCTTCTCTCTCTATCGT 59.899 45.833 0.00 0.00 42.38 3.73
659 663 4.377021 TCTGAGCTTCTCTCTCTATCGTC 58.623 47.826 0.00 0.00 42.38 4.20
660 664 3.127589 TGAGCTTCTCTCTCTATCGTCG 58.872 50.000 0.00 0.00 42.38 5.12
661 665 1.871039 AGCTTCTCTCTCTATCGTCGC 59.129 52.381 0.00 0.00 0.00 5.19
677 706 2.496817 GCCGTCCGCATCTCTCTT 59.503 61.111 0.00 0.00 37.47 2.85
678 707 1.880340 GCCGTCCGCATCTCTCTTG 60.880 63.158 0.00 0.00 37.47 3.02
687 716 1.654317 CATCTCTCTTGCCTGCTGAC 58.346 55.000 0.00 0.00 0.00 3.51
689 718 0.543883 TCTCTCTTGCCTGCTGACCT 60.544 55.000 0.00 0.00 0.00 3.85
691 720 1.447489 CTCTTGCCTGCTGACCTCG 60.447 63.158 0.00 0.00 0.00 4.63
693 722 1.739562 CTTGCCTGCTGACCTCGTC 60.740 63.158 0.00 0.00 0.00 4.20
697 726 1.216710 CCTGCTGACCTCGTCTTCC 59.783 63.158 0.00 0.00 33.15 3.46
701 730 2.678934 TGACCTCGTCTTCCCCGG 60.679 66.667 0.00 0.00 33.15 5.73
710 739 3.646715 CTTCCCCGGCCAACCTCA 61.647 66.667 2.24 0.00 0.00 3.86
765 794 2.344535 CCAAAGGCAAGGGTGTGAG 58.655 57.895 0.00 0.00 0.00 3.51
770 799 1.966451 GGCAAGGGTGTGAGAACGG 60.966 63.158 0.00 0.00 0.00 4.44
772 801 1.228657 GCAAGGGTGTGAGAACGGTC 61.229 60.000 0.00 0.00 0.00 4.79
786 815 2.144482 ACGGTCGTTACAGTTTCCAG 57.856 50.000 0.00 0.00 28.88 3.86
874 905 1.645402 CCCCTACCCATCCCAACTGG 61.645 65.000 0.00 0.00 0.00 4.00
912 943 2.531206 CGAACGAGGAAGAAGATCCAC 58.469 52.381 0.00 0.00 42.27 4.02
1113 1153 1.820481 CTCCTCGTCCTCGTCCTCC 60.820 68.421 0.00 0.00 38.33 4.30
1272 1323 2.548480 CTGACACGTCACTGTCTGTCTA 59.452 50.000 5.61 0.00 41.15 2.59
1281 1332 3.441922 TCACTGTCTGTCTATCTGTCTGC 59.558 47.826 0.00 0.00 0.00 4.26
1581 1649 9.171877 AGCAAATTCTGAAAAATGTTTTGGTTA 57.828 25.926 9.52 0.00 0.00 2.85
1595 1663 0.913934 TGGTTATGCAGCTGGAGGGA 60.914 55.000 17.12 0.00 0.00 4.20
1663 1731 3.689649 GTCCGCCTCTTCATGTTTGTATT 59.310 43.478 0.00 0.00 0.00 1.89
1665 1733 3.429085 CGCCTCTTCATGTTTGTATTGC 58.571 45.455 0.00 0.00 0.00 3.56
1667 1735 3.731867 GCCTCTTCATGTTTGTATTGCCG 60.732 47.826 0.00 0.00 0.00 5.69
1670 1738 4.793071 TCTTCATGTTTGTATTGCCGTTG 58.207 39.130 0.00 0.00 0.00 4.10
1673 1741 2.414058 TGTTTGTATTGCCGTTGCTG 57.586 45.000 0.00 0.00 38.71 4.41
1674 1742 1.950216 TGTTTGTATTGCCGTTGCTGA 59.050 42.857 0.00 0.00 38.71 4.26
1678 1757 0.878416 GTATTGCCGTTGCTGAACCA 59.122 50.000 0.00 0.00 38.71 3.67
1680 1759 0.537143 ATTGCCGTTGCTGAACCAGA 60.537 50.000 0.00 0.00 38.71 3.86
1694 1773 2.409948 ACCAGACAGATTGCTTAGCC 57.590 50.000 0.29 0.00 0.00 3.93
1781 1860 7.822161 TGAATTACGATGATGGGATCAATTT 57.178 32.000 0.00 0.00 43.50 1.82
1787 1866 6.066690 ACGATGATGGGATCAATTTCTCAAT 58.933 36.000 0.00 0.00 43.50 2.57
1797 1876 7.095270 GGATCAATTTCTCAATGAAGCTTTGT 58.905 34.615 0.00 0.00 35.89 2.83
1834 1917 5.944013 ACGATGATGTCAGATAGGATTACG 58.056 41.667 0.00 0.00 0.00 3.18
1866 1949 5.663456 GTGGATTGTGAAATACCATTGCAT 58.337 37.500 0.00 0.00 33.19 3.96
1889 1972 4.668576 TGTACTGGACGAGTAAACTACG 57.331 45.455 0.00 0.00 38.96 3.51
1893 1976 4.067896 ACTGGACGAGTAAACTACGAAGA 58.932 43.478 0.00 0.00 30.86 2.87
1936 2019 4.917415 TCAATCATAGTGATGCATACGACG 59.083 41.667 0.00 0.00 37.15 5.12
1977 2060 3.678548 GTCACGGTTCATCCTTAGTTGTC 59.321 47.826 0.00 0.00 0.00 3.18
2005 2091 4.282195 TCACTGTTTTCTTGGGTTGTTTGT 59.718 37.500 0.00 0.00 0.00 2.83
2007 2093 5.468409 CACTGTTTTCTTGGGTTGTTTGTTT 59.532 36.000 0.00 0.00 0.00 2.83
2127 2687 2.724977 TTCGTCAGACTTAGTGGCAG 57.275 50.000 0.00 0.00 0.00 4.85
2315 2876 0.179067 AGGGTTCGACGCTTCAACAA 60.179 50.000 0.00 0.00 38.28 2.83
2372 2933 1.224039 GGCTCTCAGCTGGCTTCAT 59.776 57.895 15.13 0.00 41.99 2.57
2373 2934 0.814812 GGCTCTCAGCTGGCTTCATC 60.815 60.000 15.13 0.00 41.99 2.92
2410 2971 4.273318 GAAGTTCTTGGGCTGAACCATAT 58.727 43.478 12.30 1.67 43.28 1.78
2411 2972 4.322057 AGTTCTTGGGCTGAACCATATT 57.678 40.909 12.30 0.00 43.28 1.28
2942 3777 1.000233 GGATTCATGCCCACACCCA 60.000 57.895 0.00 0.00 0.00 4.51
3023 3858 3.052082 CTTGGAGCACGGCACTGG 61.052 66.667 0.00 0.00 0.00 4.00
3122 3957 1.331756 GTTACCATTGAGCAGGCATCG 59.668 52.381 0.00 0.00 0.00 3.84
3200 4036 3.245229 TGGCCACTGTTATCACATTTCCT 60.245 43.478 0.00 0.00 30.39 3.36
3234 4070 6.456795 TTCATCGATATCTGAACTGTCACT 57.543 37.500 0.00 0.00 0.00 3.41
3242 4078 4.537135 TCTGAACTGTCACTTATGGTCC 57.463 45.455 0.00 0.00 0.00 4.46
3244 4080 4.532126 TCTGAACTGTCACTTATGGTCCAT 59.468 41.667 9.88 9.88 0.00 3.41
3247 4084 5.705441 TGAACTGTCACTTATGGTCCATTTC 59.295 40.000 10.33 5.04 0.00 2.17
3252 4089 5.705441 TGTCACTTATGGTCCATTTCACTTC 59.295 40.000 10.33 0.00 0.00 3.01
3262 4099 3.003275 TCCATTTCACTTCACTTGCGTTC 59.997 43.478 0.00 0.00 0.00 3.95
3274 4111 4.994217 TCACTTGCGTTCTGTTCAATCATA 59.006 37.500 0.00 0.00 0.00 2.15
3275 4112 5.643348 TCACTTGCGTTCTGTTCAATCATAT 59.357 36.000 0.00 0.00 0.00 1.78
3278 4115 5.973651 TGCGTTCTGTTCAATCATATCTC 57.026 39.130 0.00 0.00 0.00 2.75
3279 4116 5.418676 TGCGTTCTGTTCAATCATATCTCA 58.581 37.500 0.00 0.00 0.00 3.27
3281 4118 7.209475 TGCGTTCTGTTCAATCATATCTCATA 58.791 34.615 0.00 0.00 0.00 2.15
3282 4119 7.874528 TGCGTTCTGTTCAATCATATCTCATAT 59.125 33.333 0.00 0.00 0.00 1.78
3283 4120 9.358872 GCGTTCTGTTCAATCATATCTCATATA 57.641 33.333 0.00 0.00 0.00 0.86
3326 4163 9.236006 CTCCCAAAAGTTCATATATGGATTAGG 57.764 37.037 12.78 9.94 0.00 2.69
3371 4208 1.469308 AGTGTCTCGAGTCGAACCATC 59.531 52.381 17.27 10.06 34.74 3.51
3377 4214 1.611977 TCGAGTCGAACCATCTGTTGT 59.388 47.619 13.98 0.00 37.29 3.32
3380 4217 3.654414 GAGTCGAACCATCTGTTGTCTT 58.346 45.455 0.00 0.00 37.29 3.01
3425 4262 6.508030 TGATACTTGGCCCAACATTATCTA 57.492 37.500 0.00 2.39 0.00 1.98
3430 4267 4.853468 TGGCCCAACATTATCTACTGAA 57.147 40.909 0.00 0.00 0.00 3.02
3437 4274 7.489113 GCCCAACATTATCTACTGAATTTTGTG 59.511 37.037 0.00 0.00 0.00 3.33
3439 4276 8.522830 CCAACATTATCTACTGAATTTTGTGGT 58.477 33.333 0.00 0.00 0.00 4.16
3494 4331 1.024579 GGCTTCCGGCGATTCTTCAA 61.025 55.000 9.30 0.00 42.94 2.69
3502 4339 2.159382 GGCGATTCTTCAAGGAAACCA 58.841 47.619 0.00 0.00 0.00 3.67
3538 4375 4.712051 AATATGAAGCTGACCATAGGCA 57.288 40.909 8.89 0.00 0.00 4.75
3636 4480 7.613585 TGGAAAACTCTCGTGGTTGTATATTA 58.386 34.615 0.00 0.00 0.00 0.98
3638 4482 8.548721 GGAAAACTCTCGTGGTTGTATATTATG 58.451 37.037 0.00 0.00 0.00 1.90
3646 4490 5.642063 CGTGGTTGTATATTATGATCCCACC 59.358 44.000 0.00 0.00 37.19 4.61
3652 4496 7.964666 TGTATATTATGATCCCACCGTCATA 57.035 36.000 0.00 0.00 36.53 2.15
3666 4510 4.931601 CACCGTCATATGATCGATCCATTT 59.068 41.667 22.31 8.54 0.00 2.32
3689 4533 3.250040 GCTTCTTTCTGCTGGTTCGTTTA 59.750 43.478 0.00 0.00 0.00 2.01
3691 4535 4.806342 TCTTTCTGCTGGTTCGTTTAAC 57.194 40.909 0.00 0.00 37.36 2.01
3692 4536 4.448210 TCTTTCTGCTGGTTCGTTTAACT 58.552 39.130 0.00 0.00 38.23 2.24
3693 4537 4.272504 TCTTTCTGCTGGTTCGTTTAACTG 59.727 41.667 0.00 0.00 38.23 3.16
3694 4538 1.871039 TCTGCTGGTTCGTTTAACTGC 59.129 47.619 0.00 0.00 38.23 4.40
3695 4539 1.873591 CTGCTGGTTCGTTTAACTGCT 59.126 47.619 0.00 0.00 37.91 4.24
3696 4540 2.290641 CTGCTGGTTCGTTTAACTGCTT 59.709 45.455 0.00 0.00 37.91 3.91
3697 4541 2.032799 TGCTGGTTCGTTTAACTGCTTG 59.967 45.455 0.00 0.00 37.91 4.01
3700 4544 2.356382 TGGTTCGTTTAACTGCTTGTGG 59.644 45.455 0.00 0.00 38.23 4.17
3701 4545 2.287368 GGTTCGTTTAACTGCTTGTGGG 60.287 50.000 0.00 0.00 38.23 4.61
3704 4548 1.336755 CGTTTAACTGCTTGTGGGCTT 59.663 47.619 0.00 0.00 0.00 4.35
3705 4549 2.742774 GTTTAACTGCTTGTGGGCTTG 58.257 47.619 0.00 0.00 0.00 4.01
3706 4550 2.065899 TTAACTGCTTGTGGGCTTGT 57.934 45.000 0.00 0.00 0.00 3.16
3707 4551 1.317613 TAACTGCTTGTGGGCTTGTG 58.682 50.000 0.00 0.00 0.00 3.33
3708 4552 1.394266 AACTGCTTGTGGGCTTGTGG 61.394 55.000 0.00 0.00 0.00 4.17
3709 4553 1.829533 CTGCTTGTGGGCTTGTGGT 60.830 57.895 0.00 0.00 0.00 4.16
3710 4554 1.799258 CTGCTTGTGGGCTTGTGGTC 61.799 60.000 0.00 0.00 0.00 4.02
3712 4556 1.181098 GCTTGTGGGCTTGTGGTCAT 61.181 55.000 0.00 0.00 0.00 3.06
3714 4558 0.888736 TTGTGGGCTTGTGGTCATCG 60.889 55.000 0.00 0.00 0.00 3.84
3716 4560 3.134127 GGGCTTGTGGTCATCGGC 61.134 66.667 0.00 0.00 0.00 5.54
3717 4561 3.134127 GGCTTGTGGTCATCGGCC 61.134 66.667 0.00 0.00 0.00 6.13
3718 4562 3.499737 GCTTGTGGTCATCGGCCG 61.500 66.667 22.12 22.12 0.00 6.13
3719 4563 3.499737 CTTGTGGTCATCGGCCGC 61.500 66.667 23.51 6.01 37.06 6.53
3722 4566 4.760047 GTGGTCATCGGCCGCACT 62.760 66.667 23.51 4.26 36.58 4.40
3725 4569 2.750888 GGTCATCGGCCGCACTTTC 61.751 63.158 23.51 8.27 0.00 2.62
3726 4570 2.032634 GTCATCGGCCGCACTTTCA 61.033 57.895 23.51 0.16 0.00 2.69
3727 4571 1.741401 TCATCGGCCGCACTTTCAG 60.741 57.895 23.51 3.43 0.00 3.02
3729 4573 0.739462 CATCGGCCGCACTTTCAGTA 60.739 55.000 23.51 0.00 0.00 2.74
3730 4574 0.036765 ATCGGCCGCACTTTCAGTAA 60.037 50.000 23.51 0.00 0.00 2.24
3731 4575 0.249953 TCGGCCGCACTTTCAGTAAA 60.250 50.000 23.51 0.00 0.00 2.01
3732 4576 0.589223 CGGCCGCACTTTCAGTAAAA 59.411 50.000 14.67 0.00 0.00 1.52
3734 4578 1.335496 GGCCGCACTTTCAGTAAAACA 59.665 47.619 0.00 0.00 0.00 2.83
3735 4579 2.381589 GCCGCACTTTCAGTAAAACAC 58.618 47.619 0.00 0.00 0.00 3.32
3736 4580 2.223386 GCCGCACTTTCAGTAAAACACA 60.223 45.455 0.00 0.00 0.00 3.72
3737 4581 3.617669 CCGCACTTTCAGTAAAACACAG 58.382 45.455 0.00 0.00 0.00 3.66
3738 4582 3.548014 CCGCACTTTCAGTAAAACACAGG 60.548 47.826 0.00 0.00 0.00 4.00
3739 4583 3.311322 CGCACTTTCAGTAAAACACAGGA 59.689 43.478 0.00 0.00 0.00 3.86
3740 4584 4.201871 CGCACTTTCAGTAAAACACAGGAA 60.202 41.667 0.00 0.00 0.00 3.36
3742 4586 6.273071 GCACTTTCAGTAAAACACAGGAATT 58.727 36.000 0.00 0.00 0.00 2.17
3743 4587 6.198966 GCACTTTCAGTAAAACACAGGAATTG 59.801 38.462 0.00 0.00 0.00 2.32
3744 4588 6.198966 CACTTTCAGTAAAACACAGGAATTGC 59.801 38.462 0.00 0.00 0.00 3.56
3745 4589 5.843673 TTCAGTAAAACACAGGAATTGCA 57.156 34.783 0.00 0.00 0.00 4.08
3746 4590 6.403866 TTCAGTAAAACACAGGAATTGCAT 57.596 33.333 0.00 0.00 0.00 3.96
3747 4591 6.403866 TCAGTAAAACACAGGAATTGCATT 57.596 33.333 0.00 0.00 0.00 3.56
3748 4592 6.446318 TCAGTAAAACACAGGAATTGCATTC 58.554 36.000 0.00 0.00 38.55 2.67
3749 4593 6.265196 TCAGTAAAACACAGGAATTGCATTCT 59.735 34.615 0.00 0.00 39.24 2.40
3750 4594 6.364165 CAGTAAAACACAGGAATTGCATTCTG 59.636 38.462 0.00 0.00 39.24 3.02
3752 4596 1.547372 ACACAGGAATTGCATTCTGCC 59.453 47.619 0.00 0.00 44.23 4.85
3753 4597 1.822990 CACAGGAATTGCATTCTGCCT 59.177 47.619 0.00 0.00 44.23 4.75
3755 4599 3.635373 CACAGGAATTGCATTCTGCCTAT 59.365 43.478 0.00 0.00 44.23 2.57
3759 4723 3.385755 GGAATTGCATTCTGCCTATGGTT 59.614 43.478 0.00 0.00 44.23 3.67
3761 4725 5.422145 GAATTGCATTCTGCCTATGGTTTT 58.578 37.500 0.00 0.00 44.23 2.43
3775 4739 6.350110 GCCTATGGTTTTCAGTAATTGCAAGA 60.350 38.462 4.94 0.00 0.00 3.02
3776 4740 7.253422 CCTATGGTTTTCAGTAATTGCAAGAG 58.747 38.462 4.94 0.00 0.00 2.85
3777 4741 4.870363 TGGTTTTCAGTAATTGCAAGAGC 58.130 39.130 4.94 0.00 42.57 4.09
3800 4764 2.353958 CATGGAGCCACTGCCACT 59.646 61.111 0.00 0.00 36.92 4.00
3819 4783 2.666526 GCAGCTAGCGGTATGGCC 60.667 66.667 16.41 0.00 0.00 5.36
3820 4784 2.821685 CAGCTAGCGGTATGGCCA 59.178 61.111 8.56 8.56 36.97 5.36
3821 4785 1.372683 CAGCTAGCGGTATGGCCAT 59.627 57.895 24.45 24.45 36.97 4.40
3822 4786 0.952497 CAGCTAGCGGTATGGCCATG 60.952 60.000 29.04 12.96 36.97 3.66
3823 4787 1.672356 GCTAGCGGTATGGCCATGG 60.672 63.158 29.04 17.51 36.97 3.66
3824 4788 1.672356 CTAGCGGTATGGCCATGGC 60.672 63.158 29.47 29.47 41.06 4.40
3825 4789 2.395988 CTAGCGGTATGGCCATGGCA 62.396 60.000 36.56 23.14 44.11 4.92
3826 4790 1.988982 TAGCGGTATGGCCATGGCAA 61.989 55.000 36.56 28.74 42.43 4.52
3835 4799 2.374184 TGGCCATGGCAATGTAAGTAC 58.626 47.619 36.56 16.35 44.11 2.73
3843 4807 1.933853 GCAATGTAAGTACAGAGCGGG 59.066 52.381 0.00 0.00 39.92 6.13
3897 4861 0.031314 ACGTGCTGTCTGTCTCTGTG 59.969 55.000 0.00 0.00 0.00 3.66
3899 4863 0.033228 GTGCTGTCTGTCTCTGTGCT 59.967 55.000 0.00 0.00 0.00 4.40
3908 4872 0.861837 GTCTCTGTGCTGGTTTCACG 59.138 55.000 0.00 0.00 37.26 4.35
3933 4897 3.185246 GAAGAATTCATGCGGAGGAGA 57.815 47.619 8.44 0.00 46.62 3.71
3934 4898 2.611225 AGAATTCATGCGGAGGAGAC 57.389 50.000 8.44 0.00 0.00 3.36
3935 4899 1.202463 AGAATTCATGCGGAGGAGACG 60.202 52.381 8.44 0.00 0.00 4.18
3936 4900 0.824109 AATTCATGCGGAGGAGACGA 59.176 50.000 0.00 0.00 0.00 4.20
3937 4901 1.043816 ATTCATGCGGAGGAGACGAT 58.956 50.000 0.00 0.00 0.00 3.73
3938 4902 0.103026 TTCATGCGGAGGAGACGATG 59.897 55.000 0.00 0.00 0.00 3.84
3939 4903 1.300465 CATGCGGAGGAGACGATGG 60.300 63.158 0.00 0.00 0.00 3.51
3941 4905 0.467474 ATGCGGAGGAGACGATGGTA 60.467 55.000 0.00 0.00 0.00 3.25
3942 4906 1.101635 TGCGGAGGAGACGATGGTAG 61.102 60.000 0.00 0.00 0.00 3.18
3943 4907 0.818445 GCGGAGGAGACGATGGTAGA 60.818 60.000 0.00 0.00 0.00 2.59
3944 4908 0.945813 CGGAGGAGACGATGGTAGAC 59.054 60.000 0.00 0.00 0.00 2.59
3945 4909 1.746171 CGGAGGAGACGATGGTAGACA 60.746 57.143 0.00 0.00 0.00 3.41
3967 4956 2.024414 GTTCAGAGTTGGTTGGCAAGT 58.976 47.619 0.00 0.00 0.00 3.16
3979 4968 1.965930 GGCAAGTCGATGTGCACCA 60.966 57.895 15.69 2.61 42.74 4.17
3980 4969 1.514678 GGCAAGTCGATGTGCACCAA 61.515 55.000 15.69 0.00 42.74 3.67
3989 4978 0.179032 ATGTGCACCAAGACGACCAA 60.179 50.000 15.69 0.00 0.00 3.67
3994 4983 0.179056 CACCAAGACGACCAACAGGT 60.179 55.000 0.00 0.00 38.69 4.00
3996 4985 1.507141 CCAAGACGACCAACAGGTGC 61.507 60.000 0.00 0.00 35.25 5.01
3997 4986 0.813610 CAAGACGACCAACAGGTGCA 60.814 55.000 0.00 0.00 35.25 4.57
3998 4987 0.107410 AAGACGACCAACAGGTGCAA 60.107 50.000 0.00 0.00 35.25 4.08
4000 4989 0.028902 GACGACCAACAGGTGCAAAC 59.971 55.000 0.00 0.00 35.25 2.93
4003 4992 1.268539 CGACCAACAGGTGCAAACTTC 60.269 52.381 0.00 0.00 35.25 3.01
4008 4997 1.392589 ACAGGTGCAAACTTCAGTGG 58.607 50.000 0.00 0.00 0.00 4.00
4022 5011 3.920231 TCAGTGGAAGGAATGATGAGG 57.080 47.619 0.00 0.00 0.00 3.86
4030 5043 1.849039 AGGAATGATGAGGGACCCAAG 59.151 52.381 14.60 0.00 0.00 3.61
4038 5051 6.935240 TGATGAGGGACCCAAGTTATATAG 57.065 41.667 14.60 0.00 0.00 1.31
4039 5052 6.630131 TGATGAGGGACCCAAGTTATATAGA 58.370 40.000 14.60 0.00 0.00 1.98
4040 5053 7.256399 TGATGAGGGACCCAAGTTATATAGAT 58.744 38.462 14.60 0.00 0.00 1.98
4041 5054 8.406643 TGATGAGGGACCCAAGTTATATAGATA 58.593 37.037 14.60 0.00 0.00 1.98
4042 5055 8.611051 ATGAGGGACCCAAGTTATATAGATAC 57.389 38.462 14.60 0.00 0.00 2.24
4043 5056 7.541074 TGAGGGACCCAAGTTATATAGATACA 58.459 38.462 14.60 0.00 0.00 2.29
4044 5057 8.184249 TGAGGGACCCAAGTTATATAGATACAT 58.816 37.037 14.60 0.00 0.00 2.29
4077 5091 4.125703 AGCTAAACTATGTGCTGATGCTC 58.874 43.478 0.00 0.00 40.48 4.26
4100 5114 1.871126 GCAAGGAAAGAGCCAGCACC 61.871 60.000 0.00 0.00 33.22 5.01
4101 5115 1.302832 AAGGAAAGAGCCAGCACCG 60.303 57.895 0.00 0.00 0.00 4.94
4104 5118 2.670934 AAAGAGCCAGCACCGCAG 60.671 61.111 0.00 0.00 0.00 5.18
4124 5138 2.576648 AGGGGTTGTCCTGGAGATAAAC 59.423 50.000 0.00 0.00 35.47 2.01
4129 5143 4.816925 GGTTGTCCTGGAGATAAACTATGC 59.183 45.833 0.00 0.00 30.94 3.14
4134 5148 0.435008 GGAGATAAACTATGCGCGCG 59.565 55.000 28.44 28.44 0.00 6.86
4157 5448 0.320771 CCGACTAAGCTTGGCACACT 60.321 55.000 9.86 0.00 39.29 3.55
4163 5454 0.882042 AAGCTTGGCACACTCGTCAG 60.882 55.000 0.00 0.00 39.29 3.51
4164 5455 2.959357 GCTTGGCACACTCGTCAGC 61.959 63.158 0.00 0.00 39.29 4.26
4165 5456 2.661537 TTGGCACACTCGTCAGCG 60.662 61.111 0.00 0.00 39.29 5.18
4166 5457 3.145422 TTGGCACACTCGTCAGCGA 62.145 57.895 0.00 0.00 41.78 4.93
4167 5458 3.106407 GGCACACTCGTCAGCGAC 61.106 66.667 0.00 0.00 42.81 5.19
4168 5459 2.049985 GCACACTCGTCAGCGACT 60.050 61.111 7.03 0.00 42.81 4.18
4169 5460 1.661821 GCACACTCGTCAGCGACTT 60.662 57.895 7.03 0.00 42.81 3.01
4183 5477 1.322637 GCGACTTACGTCCGAATTTCC 59.677 52.381 0.00 0.00 44.60 3.13
4185 5479 2.988493 CGACTTACGTCCGAATTTCCAA 59.012 45.455 0.00 0.00 36.82 3.53
4187 5481 4.664891 CGACTTACGTCCGAATTTCCAAAC 60.665 45.833 0.00 0.00 36.82 2.93
4188 5482 4.128643 ACTTACGTCCGAATTTCCAAACA 58.871 39.130 0.00 0.00 0.00 2.83
4189 5483 4.758165 ACTTACGTCCGAATTTCCAAACAT 59.242 37.500 0.00 0.00 0.00 2.71
4190 5484 5.239963 ACTTACGTCCGAATTTCCAAACATT 59.760 36.000 0.00 0.00 0.00 2.71
4192 5486 4.939271 ACGTCCGAATTTCCAAACATTTT 58.061 34.783 0.00 0.00 0.00 1.82
4193 5487 5.353111 ACGTCCGAATTTCCAAACATTTTT 58.647 33.333 0.00 0.00 0.00 1.94
4194 5488 5.233263 ACGTCCGAATTTCCAAACATTTTTG 59.767 36.000 0.00 0.00 41.71 2.44
4195 5489 5.233263 CGTCCGAATTTCCAAACATTTTTGT 59.767 36.000 3.78 0.00 40.61 2.83
4198 5492 8.059502 GTCCGAATTTCCAAACATTTTTGTAAC 58.940 33.333 3.78 0.00 40.61 2.50
4199 5493 7.224949 TCCGAATTTCCAAACATTTTTGTAACC 59.775 33.333 3.78 0.00 40.61 2.85
4200 5494 7.225734 CCGAATTTCCAAACATTTTTGTAACCT 59.774 33.333 3.78 0.00 40.61 3.50
4201 5495 8.061268 CGAATTTCCAAACATTTTTGTAACCTG 58.939 33.333 3.78 0.00 40.61 4.00
4203 5497 9.454859 AATTTCCAAACATTTTTGTAACCTGAA 57.545 25.926 3.78 0.00 40.61 3.02
4204 5498 9.625747 ATTTCCAAACATTTTTGTAACCTGAAT 57.374 25.926 3.78 0.00 40.61 2.57
4206 5500 9.454859 TTCCAAACATTTTTGTAACCTGAATTT 57.545 25.926 3.78 0.00 40.61 1.82
4208 5502 8.887717 CCAAACATTTTTGTAACCTGAATTTCA 58.112 29.630 3.78 0.00 40.61 2.69
4237 5601 3.373439 AGCGCTGAAAGATTTTAGCTGAG 59.627 43.478 10.39 6.01 44.67 3.35
4242 5606 6.699204 CGCTGAAAGATTTTAGCTGAGAGATA 59.301 38.462 16.86 0.00 44.67 1.98
4243 5607 7.096106 CGCTGAAAGATTTTAGCTGAGAGATAG 60.096 40.741 16.86 0.00 44.67 2.08
4244 5608 7.925483 GCTGAAAGATTTTAGCTGAGAGATAGA 59.075 37.037 13.16 0.00 43.83 1.98
4245 5609 9.985730 CTGAAAGATTTTAGCTGAGAGATAGAT 57.014 33.333 0.00 0.00 34.07 1.98
4269 5633 4.720649 CGTAGGGTGAAGATTCAGAGAA 57.279 45.455 0.00 0.00 37.98 2.87
4270 5634 4.677584 CGTAGGGTGAAGATTCAGAGAAG 58.322 47.826 0.00 0.00 37.98 2.85
4271 5635 3.625649 AGGGTGAAGATTCAGAGAAGC 57.374 47.619 0.00 0.00 37.98 3.86
4272 5636 2.909006 AGGGTGAAGATTCAGAGAAGCA 59.091 45.455 0.00 0.00 37.98 3.91
4273 5637 3.055240 AGGGTGAAGATTCAGAGAAGCAG 60.055 47.826 0.00 0.00 37.98 4.24
4274 5638 3.055530 GGGTGAAGATTCAGAGAAGCAGA 60.056 47.826 0.00 0.00 37.98 4.26
4275 5639 4.564406 GGGTGAAGATTCAGAGAAGCAGAA 60.564 45.833 0.00 0.00 37.98 3.02
4276 5640 4.391523 GGTGAAGATTCAGAGAAGCAGAAC 59.608 45.833 0.00 0.00 37.98 3.01
4277 5641 4.391523 GTGAAGATTCAGAGAAGCAGAACC 59.608 45.833 0.00 0.00 37.98 3.62
4278 5642 4.285517 TGAAGATTCAGAGAAGCAGAACCT 59.714 41.667 0.00 0.00 32.50 3.50
4279 5643 4.205065 AGATTCAGAGAAGCAGAACCTG 57.795 45.455 0.00 0.00 34.12 4.00
4280 5644 2.847327 TTCAGAGAAGCAGAACCTGG 57.153 50.000 0.00 0.00 31.21 4.45
4281 5645 2.015456 TCAGAGAAGCAGAACCTGGA 57.985 50.000 0.00 0.00 31.21 3.86
4282 5646 2.329267 TCAGAGAAGCAGAACCTGGAA 58.671 47.619 0.00 0.00 31.21 3.53
4283 5647 2.909006 TCAGAGAAGCAGAACCTGGAAT 59.091 45.455 0.00 0.00 31.21 3.01
4284 5648 4.096681 TCAGAGAAGCAGAACCTGGAATA 58.903 43.478 0.00 0.00 31.21 1.75
4285 5649 4.081420 TCAGAGAAGCAGAACCTGGAATAC 60.081 45.833 0.00 0.00 31.21 1.89
4286 5650 3.198853 AGAGAAGCAGAACCTGGAATACC 59.801 47.826 0.00 0.00 31.21 2.73
4287 5651 2.093447 AGAAGCAGAACCTGGAATACCG 60.093 50.000 0.00 0.00 39.42 4.02
4288 5652 1.276622 AGCAGAACCTGGAATACCGT 58.723 50.000 0.00 0.00 39.42 4.83
4289 5653 2.463752 AGCAGAACCTGGAATACCGTA 58.536 47.619 0.00 0.00 39.42 4.02
4290 5654 2.431057 AGCAGAACCTGGAATACCGTAG 59.569 50.000 0.00 0.00 39.42 3.51
4291 5655 2.483188 GCAGAACCTGGAATACCGTAGG 60.483 54.545 0.00 0.00 42.97 3.18
4292 5656 5.611825 GCAGAACCTGGAATACCGTAGGG 62.612 56.522 0.00 0.00 42.02 3.53
4308 5672 4.677584 CGTAGGGTGAAGATTCAGAGAAG 58.322 47.826 0.00 0.00 37.98 2.85
4313 5677 4.564406 GGGTGAAGATTCAGAGAAGCAGAA 60.564 45.833 0.00 0.00 37.98 3.02
4318 5682 2.847327 TTCAGAGAAGCAGAACCTGG 57.153 50.000 0.00 0.00 31.21 4.45
4320 5684 2.329267 TCAGAGAAGCAGAACCTGGAA 58.671 47.619 0.00 0.00 31.21 3.53
4321 5685 2.705658 TCAGAGAAGCAGAACCTGGAAA 59.294 45.455 0.00 0.00 31.21 3.13
4325 5689 2.155279 GAAGCAGAACCTGGAAACCTC 58.845 52.381 0.00 0.00 31.21 3.85
4326 5690 0.035458 AGCAGAACCTGGAAACCTCG 59.965 55.000 0.00 0.00 31.21 4.63
4328 5692 0.321653 CAGAACCTGGAAACCTCGGG 60.322 60.000 0.00 0.00 0.00 5.14
4329 5693 1.674651 GAACCTGGAAACCTCGGGC 60.675 63.158 0.00 0.00 0.00 6.13
4331 5695 2.359975 CCTGGAAACCTCGGGCAC 60.360 66.667 0.00 0.00 0.00 5.01
4332 5696 2.750350 CTGGAAACCTCGGGCACT 59.250 61.111 0.00 0.00 0.00 4.40
4333 5697 1.376037 CTGGAAACCTCGGGCACTC 60.376 63.158 0.00 0.00 0.00 3.51
4334 5698 1.831652 CTGGAAACCTCGGGCACTCT 61.832 60.000 0.00 0.00 0.00 3.24
4338 5702 2.456287 AAACCTCGGGCACTCTCTGC 62.456 60.000 0.00 0.00 46.31 4.26
4348 5712 3.443099 GCACTCTCTGCAAACCTTTTT 57.557 42.857 0.00 0.00 46.29 1.94
4369 5733 5.772825 TTTTTAGATGCTCTGCAAACTGT 57.227 34.783 0.00 0.00 43.62 3.55
4370 5734 5.772825 TTTTAGATGCTCTGCAAACTGTT 57.227 34.783 0.00 0.00 43.62 3.16
4371 5735 4.754372 TTAGATGCTCTGCAAACTGTTG 57.246 40.909 0.00 0.00 43.62 3.33
4372 5736 2.854963 AGATGCTCTGCAAACTGTTGA 58.145 42.857 0.00 0.00 43.62 3.18
4373 5737 3.216800 AGATGCTCTGCAAACTGTTGAA 58.783 40.909 0.00 0.00 43.62 2.69
4374 5738 3.252701 AGATGCTCTGCAAACTGTTGAAG 59.747 43.478 0.00 0.00 43.62 3.02
4375 5739 2.642427 TGCTCTGCAAACTGTTGAAGA 58.358 42.857 0.00 0.00 45.72 2.87
4376 5740 3.216800 TGCTCTGCAAACTGTTGAAGAT 58.783 40.909 0.00 0.00 46.50 2.40
4377 5741 4.388485 TGCTCTGCAAACTGTTGAAGATA 58.612 39.130 0.00 0.00 46.50 1.98
4378 5742 4.214119 TGCTCTGCAAACTGTTGAAGATAC 59.786 41.667 0.00 0.00 46.50 2.24
4379 5743 4.378874 GCTCTGCAAACTGTTGAAGATACC 60.379 45.833 0.00 0.00 46.50 2.73
4380 5744 3.745975 TCTGCAAACTGTTGAAGATACCG 59.254 43.478 0.00 0.00 43.45 4.02
4381 5745 3.734463 TGCAAACTGTTGAAGATACCGA 58.266 40.909 0.00 0.00 36.83 4.69
4382 5746 4.130857 TGCAAACTGTTGAAGATACCGAA 58.869 39.130 0.00 0.00 36.83 4.30
4383 5747 4.759693 TGCAAACTGTTGAAGATACCGAAT 59.240 37.500 0.00 0.00 36.83 3.34
4384 5748 5.106712 TGCAAACTGTTGAAGATACCGAATC 60.107 40.000 0.00 0.00 36.83 2.52
4385 5749 5.106712 GCAAACTGTTGAAGATACCGAATCA 60.107 40.000 0.00 0.00 36.83 2.57
4386 5750 6.403636 GCAAACTGTTGAAGATACCGAATCAT 60.404 38.462 0.00 0.00 36.83 2.45
4387 5751 6.668541 AACTGTTGAAGATACCGAATCATG 57.331 37.500 0.00 0.00 37.03 3.07
4388 5752 5.977635 ACTGTTGAAGATACCGAATCATGA 58.022 37.500 0.00 0.00 37.03 3.07
4389 5753 6.045318 ACTGTTGAAGATACCGAATCATGAG 58.955 40.000 0.09 0.00 37.03 2.90
4390 5754 4.811024 TGTTGAAGATACCGAATCATGAGC 59.189 41.667 0.09 0.00 37.03 4.26
4391 5755 3.642705 TGAAGATACCGAATCATGAGCG 58.357 45.455 12.36 12.36 37.03 5.03
4398 5762 1.220169 CGAATCATGAGCGGCAGAGG 61.220 60.000 11.67 0.00 0.00 3.69
4406 5770 4.168291 GCGGCAGAGGGGAAGAGG 62.168 72.222 0.00 0.00 0.00 3.69
4415 5779 2.757099 GGGAAGAGGACGGCCGTA 60.757 66.667 34.36 0.00 39.96 4.02
4492 5869 4.692625 CGAGATCAAACTGTGGTTCAATCT 59.307 41.667 0.00 0.00 38.33 2.40
4499 5876 0.684535 TGTGGTTCAATCTCTCCGCA 59.315 50.000 0.00 0.00 37.99 5.69
4504 5881 2.159043 GGTTCAATCTCTCCGCATCTCA 60.159 50.000 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 3.214328 GGATAGGGCATGTTAACCACTG 58.786 50.000 2.48 0.00 0.00 3.66
11 12 3.222603 CTTGGGATAGGGCATGTTAACC 58.777 50.000 2.48 0.00 0.00 2.85
19 20 1.306296 GCCAACTTGGGATAGGGCA 59.694 57.895 9.95 0.00 41.02 5.36
25 26 1.698506 TTTCAACGCCAACTTGGGAT 58.301 45.000 9.95 0.00 38.19 3.85
29 30 4.444056 CCAAAGTATTTCAACGCCAACTTG 59.556 41.667 0.00 0.00 35.03 3.16
38 39 7.743520 TTTGAACGAACCAAAGTATTTCAAC 57.256 32.000 0.00 0.00 35.03 3.18
54 55 6.475076 CCAATTTTTGTGATGACTTTGAACGA 59.525 34.615 0.00 0.00 0.00 3.85
65 66 2.664568 CGCAGCTCCAATTTTTGTGATG 59.335 45.455 0.00 0.00 0.00 3.07
68 69 1.421382 CCGCAGCTCCAATTTTTGTG 58.579 50.000 0.00 0.00 0.00 3.33
69 70 0.319813 GCCGCAGCTCCAATTTTTGT 60.320 50.000 0.00 0.00 35.50 2.83
85 86 3.128068 GGGTAATTCCAGTTTGTAAGCCG 59.872 47.826 0.00 0.00 38.11 5.52
86 87 4.083565 TGGGTAATTCCAGTTTGTAAGCC 58.916 43.478 0.00 0.00 38.11 4.35
95 96 4.105697 TGACTTCCTTTGGGTAATTCCAGT 59.894 41.667 0.00 0.00 38.17 4.00
98 99 6.605471 ATTTGACTTCCTTTGGGTAATTCC 57.395 37.500 0.00 0.00 0.00 3.01
104 105 6.211384 CCAGATTAATTTGACTTCCTTTGGGT 59.789 38.462 7.53 0.00 0.00 4.51
119 120 7.884877 TGAGAGACATGAAACACCAGATTAATT 59.115 33.333 0.00 0.00 0.00 1.40
120 121 7.397221 TGAGAGACATGAAACACCAGATTAAT 58.603 34.615 0.00 0.00 0.00 1.40
123 124 5.233083 TGAGAGACATGAAACACCAGATT 57.767 39.130 0.00 0.00 0.00 2.40
128 129 7.672983 TTTCTATTGAGAGACATGAAACACC 57.327 36.000 0.00 0.00 31.77 4.16
134 135 8.262933 ACATGTGATTTCTATTGAGAGACATGA 58.737 33.333 19.56 0.00 38.10 3.07
143 144 5.355071 GTCTGGCACATGTGATTTCTATTGA 59.645 40.000 29.80 9.87 38.20 2.57
148 149 2.224843 TGGTCTGGCACATGTGATTTCT 60.225 45.455 29.80 0.00 38.20 2.52
152 153 0.401356 TGTGGTCTGGCACATGTGAT 59.599 50.000 29.80 0.00 38.20 3.06
155 156 0.819259 GTGTGTGGTCTGGCACATGT 60.819 55.000 0.00 0.00 45.65 3.21
185 186 4.618920 ATCCAGAAGTTTCGGTAACACT 57.381 40.909 0.35 0.00 39.30 3.55
189 190 5.813672 CCGATAAATCCAGAAGTTTCGGTAA 59.186 40.000 0.00 0.00 33.04 2.85
191 192 4.189231 CCGATAAATCCAGAAGTTTCGGT 58.811 43.478 0.00 0.00 33.04 4.69
194 195 5.646360 TGGAACCGATAAATCCAGAAGTTTC 59.354 40.000 0.00 0.00 38.30 2.78
197 198 4.837093 TGGAACCGATAAATCCAGAAGT 57.163 40.909 0.00 0.00 38.30 3.01
212 213 1.373812 AGGTAACACGCCTGGAACC 59.626 57.895 0.00 1.98 41.41 3.62
221 222 4.082408 TCCAGTATCTGTTCAGGTAACACG 60.082 45.833 0.00 0.00 43.22 4.49
227 228 3.369892 GCATGTCCAGTATCTGTTCAGGT 60.370 47.826 0.00 0.00 0.00 4.00
239 240 1.672356 GACCAAGCGCATGTCCAGT 60.672 57.895 11.47 0.12 0.00 4.00
247 248 0.465460 ACCTTTCTTGACCAAGCGCA 60.465 50.000 11.47 0.00 38.28 6.09
248 249 1.519408 TACCTTTCTTGACCAAGCGC 58.481 50.000 0.00 0.00 38.28 5.92
251 252 3.119849 CCGCATTACCTTTCTTGACCAAG 60.120 47.826 3.47 3.47 39.71 3.61
266 267 0.740149 CCTGCAAATGAGCCGCATTA 59.260 50.000 0.00 0.00 46.25 1.90
275 276 5.125900 CCATTTGATCAGTACCTGCAAATGA 59.874 40.000 26.07 10.45 44.66 2.57
284 285 3.871594 CCGAAGTCCATTTGATCAGTACC 59.128 47.826 0.00 0.00 0.00 3.34
287 288 3.703001 ACCGAAGTCCATTTGATCAGT 57.297 42.857 0.00 0.00 0.00 3.41
302 303 2.089980 GCTACTGACTCTGGTACCGAA 58.910 52.381 7.57 0.00 0.00 4.30
319 320 5.655532 ACTTCGTAATCTTCCCAAGTAGCTA 59.344 40.000 0.00 0.00 0.00 3.32
320 321 4.466726 ACTTCGTAATCTTCCCAAGTAGCT 59.533 41.667 0.00 0.00 0.00 3.32
338 339 1.148310 ATCGTGCTTTGACCACTTCG 58.852 50.000 0.00 0.00 0.00 3.79
345 346 3.688272 CATCATGGAATCGTGCTTTGAC 58.312 45.455 0.00 0.00 0.00 3.18
356 357 0.260816 AGGCTGGTGCATCATGGAAT 59.739 50.000 0.00 0.00 41.91 3.01
361 362 2.277737 CCCAGGCTGGTGCATCAT 59.722 61.111 30.68 0.00 41.91 2.45
362 363 2.934932 TCCCAGGCTGGTGCATCA 60.935 61.111 30.68 0.00 41.91 3.07
398 400 2.154462 CTCGAAACTGACATTGCCCTT 58.846 47.619 0.00 0.00 0.00 3.95
413 415 0.738975 CCCGATGACAGTAGCTCGAA 59.261 55.000 0.00 0.00 33.07 3.71
415 417 1.299468 GCCCGATGACAGTAGCTCG 60.299 63.158 0.00 0.00 0.00 5.03
439 441 1.436983 GAATACGCCTTCCGCCTTGG 61.437 60.000 0.00 0.00 41.76 3.61
445 447 3.682858 TCTTCTTTTGAATACGCCTTCCG 59.317 43.478 0.00 0.00 39.36 4.30
451 453 5.265407 ACGTCTTCTTCTTTTGAATACGC 57.735 39.130 12.06 0.00 43.16 4.42
460 462 5.758784 CCACTTCCTTTACGTCTTCTTCTTT 59.241 40.000 0.00 0.00 0.00 2.52
465 467 2.609737 CGCCACTTCCTTTACGTCTTCT 60.610 50.000 0.00 0.00 0.00 2.85
470 472 1.004200 CCCGCCACTTCCTTTACGT 60.004 57.895 0.00 0.00 0.00 3.57
479 481 2.513259 TTCGAACCTCCCGCCACTT 61.513 57.895 0.00 0.00 0.00 3.16
480 482 2.920912 TTCGAACCTCCCGCCACT 60.921 61.111 0.00 0.00 0.00 4.00
494 496 0.250124 TACAAGCCCACACCAGTTCG 60.250 55.000 0.00 0.00 0.00 3.95
498 500 1.671054 CGGTACAAGCCCACACCAG 60.671 63.158 0.00 0.00 0.00 4.00
499 501 2.428187 CGGTACAAGCCCACACCA 59.572 61.111 0.00 0.00 0.00 4.17
501 503 3.419759 CGCGGTACAAGCCCACAC 61.420 66.667 0.00 0.00 0.00 3.82
503 505 3.419759 CACGCGGTACAAGCCCAC 61.420 66.667 12.47 0.00 0.00 4.61
504 506 4.690719 CCACGCGGTACAAGCCCA 62.691 66.667 12.47 0.00 0.00 5.36
508 510 2.358247 AAGCCCACGCGGTACAAG 60.358 61.111 12.47 0.00 41.18 3.16
511 513 2.813908 CTCAAGCCCACGCGGTAC 60.814 66.667 12.47 0.00 41.18 3.34
512 514 3.307906 ACTCAAGCCCACGCGGTA 61.308 61.111 12.47 0.00 41.18 4.02
517 519 3.716006 CACGCACTCAAGCCCACG 61.716 66.667 0.00 0.00 0.00 4.94
531 533 2.586079 CTCATGGCCCGCTACACG 60.586 66.667 0.00 0.00 43.15 4.49
544 546 3.610040 TTCTCATTACACACGGCTCAT 57.390 42.857 0.00 0.00 0.00 2.90
547 549 3.118775 TGCTATTCTCATTACACACGGCT 60.119 43.478 0.00 0.00 0.00 5.52
563 565 5.513788 CCCCACAGTCAGCTTATATGCTATT 60.514 44.000 12.39 0.00 41.98 1.73
565 567 3.324846 CCCCACAGTCAGCTTATATGCTA 59.675 47.826 12.39 0.44 41.98 3.49
589 593 1.451207 CAATGATGCCCCGAACGGA 60.451 57.895 15.07 0.00 37.50 4.69
600 604 9.309516 AGAATTCGAATTTCCATTTCAATGATG 57.690 29.630 23.49 0.00 38.70 3.07
604 608 8.689972 AGCTAGAATTCGAATTTCCATTTCAAT 58.310 29.630 23.49 0.00 0.00 2.57
612 616 8.825667 AGAGATAAGCTAGAATTCGAATTTCC 57.174 34.615 23.49 12.44 0.00 3.13
619 623 6.072508 AGCTCAGAGAGATAAGCTAGAATTCG 60.073 42.308 0.00 0.00 43.04 3.34
634 638 4.687948 CGATAGAGAGAGAAGCTCAGAGAG 59.312 50.000 0.00 0.00 46.45 3.20
640 644 2.096417 GCGACGATAGAGAGAGAAGCTC 60.096 54.545 0.00 0.00 41.45 4.09
641 645 1.871039 GCGACGATAGAGAGAGAAGCT 59.129 52.381 0.00 0.00 41.38 3.74
642 646 1.069500 GGCGACGATAGAGAGAGAAGC 60.069 57.143 0.00 0.00 41.38 3.86
643 647 2.961522 GGCGACGATAGAGAGAGAAG 57.038 55.000 0.00 0.00 41.38 2.85
660 664 1.880340 CAAGAGAGATGCGGACGGC 60.880 63.158 0.00 0.00 43.96 5.68
661 665 1.880340 GCAAGAGAGATGCGGACGG 60.880 63.158 0.00 0.00 33.57 4.79
677 706 2.159819 GAAGACGAGGTCAGCAGGCA 62.160 60.000 0.00 0.00 34.60 4.75
678 707 1.446966 GAAGACGAGGTCAGCAGGC 60.447 63.158 0.00 0.00 34.60 4.85
689 718 4.011517 GTTGGCCGGGGAAGACGA 62.012 66.667 2.18 0.00 0.00 4.20
691 720 3.623703 GAGGTTGGCCGGGGAAGAC 62.624 68.421 2.18 0.00 40.50 3.01
693 722 3.646715 TGAGGTTGGCCGGGGAAG 61.647 66.667 2.18 0.00 40.50 3.46
765 794 2.472816 TGGAAACTGTAACGACCGTTC 58.527 47.619 11.27 4.75 39.31 3.95
770 799 1.154197 GCCCTGGAAACTGTAACGAC 58.846 55.000 0.00 0.00 0.00 4.34
772 801 0.958876 GGGCCCTGGAAACTGTAACG 60.959 60.000 17.04 0.00 0.00 3.18
786 815 4.380945 TGCTGGAATGTGGGGCCC 62.381 66.667 18.17 18.17 0.00 5.80
874 905 3.026630 TCGCATTGGACGGATAAGATC 57.973 47.619 0.00 0.00 0.00 2.75
912 943 1.336795 GGCGAGGAATTTTGTGTTGGG 60.337 52.381 0.00 0.00 0.00 4.12
1206 1246 2.279073 CTCCTGGTCGGGGCTAGA 59.721 66.667 0.00 0.00 0.00 2.43
1229 1271 2.370647 GATCGCTGGGGTAGGTGAGC 62.371 65.000 0.00 0.00 0.00 4.26
1237 1284 2.060980 GTCAGGAGATCGCTGGGGT 61.061 63.158 0.00 0.00 0.00 4.95
1281 1332 2.071540 CCATGTACTCCGCTGCATATG 58.928 52.381 0.00 0.00 0.00 1.78
1562 1629 6.202570 GCTGCATAACCAAAACATTTTTCAGA 59.797 34.615 0.00 0.00 0.00 3.27
1581 1649 1.530771 GTGATCCCTCCAGCTGCAT 59.469 57.895 8.66 0.00 0.00 3.96
1663 1731 1.891919 GTCTGGTTCAGCAACGGCA 60.892 57.895 0.00 0.00 44.61 5.69
1665 1733 0.249868 TCTGTCTGGTTCAGCAACGG 60.250 55.000 0.00 0.00 32.68 4.44
1667 1735 2.351157 GCAATCTGTCTGGTTCAGCAAC 60.351 50.000 0.00 0.00 33.48 4.17
1670 1738 1.818642 AGCAATCTGTCTGGTTCAGC 58.181 50.000 0.00 0.00 33.48 4.26
1673 1741 2.680339 GGCTAAGCAATCTGTCTGGTTC 59.320 50.000 0.00 0.00 36.08 3.62
1674 1742 2.307098 AGGCTAAGCAATCTGTCTGGTT 59.693 45.455 0.00 0.00 38.09 3.67
1678 1757 1.558756 AGCAGGCTAAGCAATCTGTCT 59.441 47.619 0.00 0.00 0.00 3.41
1680 1759 2.768527 TCTAGCAGGCTAAGCAATCTGT 59.231 45.455 2.26 0.00 0.00 3.41
1694 1773 1.337703 CAGGCAGCTCTAGTCTAGCAG 59.662 57.143 1.60 2.64 42.62 4.24
1767 1846 6.183360 GCTTCATTGAGAAATTGATCCCATCA 60.183 38.462 0.00 0.00 35.40 3.07
1812 1891 4.795795 GCGTAATCCTATCTGACATCATCG 59.204 45.833 0.00 0.00 0.00 3.84
1820 1899 4.982295 CGTGATTTGCGTAATCCTATCTGA 59.018 41.667 8.40 0.00 41.68 3.27
1834 1917 2.987413 TCACAATCCACGTGATTTGC 57.013 45.000 19.30 0.00 41.85 3.68
1854 1937 5.163663 CGTCCAGTACAAATGCAATGGTATT 60.164 40.000 7.65 0.00 0.00 1.89
1859 1942 3.436704 ACTCGTCCAGTACAAATGCAATG 59.563 43.478 0.00 0.00 31.37 2.82
1866 1949 5.238432 TCGTAGTTTACTCGTCCAGTACAAA 59.762 40.000 0.00 0.00 37.32 2.83
1889 1972 2.554462 GGCTTCTTTTGGTCACCTCTTC 59.446 50.000 0.00 0.00 0.00 2.87
1893 1976 0.555769 TGGGCTTCTTTTGGTCACCT 59.444 50.000 0.00 0.00 0.00 4.00
1936 2019 3.130340 TGACAAGCAGAGGAAACCAAAAC 59.870 43.478 0.00 0.00 0.00 2.43
1977 2060 2.878406 ACCCAAGAAAACAGTGATCACG 59.122 45.455 19.85 16.37 36.20 4.35
2127 2687 4.639310 AGAGTGAATCATGCAACTCCATTC 59.361 41.667 9.76 5.31 0.00 2.67
2165 2725 9.903682 ATGCTAAATACAACTATGAAATCATGC 57.096 29.630 6.17 0.00 37.15 4.06
2209 2770 6.930164 TCAATGATTTCCTGGAACAACAATTG 59.070 34.615 9.04 13.79 38.70 2.32
2243 2804 0.035152 TGGAAGCTGCATCCGACATT 60.035 50.000 17.99 0.00 39.98 2.71
2244 2805 0.182061 ATGGAAGCTGCATCCGACAT 59.818 50.000 17.99 4.61 39.98 3.06
2315 2876 4.037565 TCGATTGTAGCATCCGATGTAAGT 59.962 41.667 10.10 0.00 0.00 2.24
2372 2933 6.672266 AGAACTTCCAGTGATGTTTAGAGA 57.328 37.500 0.00 0.00 38.55 3.10
2373 2934 6.148480 CCAAGAACTTCCAGTGATGTTTAGAG 59.852 42.308 0.00 0.00 38.55 2.43
2410 2971 9.941325 ATTGCAACCTGAAAATTATCATACAAA 57.059 25.926 0.00 0.00 0.00 2.83
2411 2972 9.941325 AATTGCAACCTGAAAATTATCATACAA 57.059 25.926 0.00 0.00 0.00 2.41
2562 3129 2.164422 GCTGTCATAGGGAAAAGGCAAC 59.836 50.000 0.00 0.00 0.00 4.17
2685 3257 7.765360 CACAAAATTATATGAGGTTGCAATGGT 59.235 33.333 0.59 0.00 0.00 3.55
2714 3546 5.930135 ACAACACATCCTTGAGTTTACTCT 58.070 37.500 10.92 0.00 43.25 3.24
2968 3803 8.202137 AGGCTAGAATATTAGCGTTCTTTAACA 58.798 33.333 0.00 0.00 45.53 2.41
3023 3858 3.851128 GGTAGGAGCGTCAGGCCC 61.851 72.222 0.00 0.00 45.17 5.80
3077 3912 1.281867 CAACCTGATGTTCTGCCCCTA 59.718 52.381 0.00 0.00 34.00 3.53
3122 3957 5.520376 AAGTGATAACCAATAAGCATGCC 57.480 39.130 15.66 0.00 0.00 4.40
3200 4036 5.467735 CAGATATCGATGAATGTGGCAGAAA 59.532 40.000 8.54 0.00 0.00 2.52
3234 4070 5.048083 GCAAGTGAAGTGAAATGGACCATAA 60.048 40.000 7.59 0.00 0.00 1.90
3283 4120 9.401058 CTTTTGGGAGTCATCTAGTTCAATAAT 57.599 33.333 0.00 0.00 0.00 1.28
3284 4121 8.383175 ACTTTTGGGAGTCATCTAGTTCAATAA 58.617 33.333 0.00 0.00 0.00 1.40
3286 4123 6.784031 ACTTTTGGGAGTCATCTAGTTCAAT 58.216 36.000 0.00 0.00 0.00 2.57
3289 4126 6.231211 TGAACTTTTGGGAGTCATCTAGTTC 58.769 40.000 0.00 0.00 37.60 3.01
3301 4138 8.732854 ACCTAATCCATATATGAACTTTTGGGA 58.267 33.333 14.54 0.00 0.00 4.37
3377 4214 7.744087 ACATAAATACAGCAAGTGTTGAAGA 57.256 32.000 1.88 0.00 40.94 2.87
3380 4217 7.503521 TCAACATAAATACAGCAAGTGTTGA 57.496 32.000 12.39 12.39 46.58 3.18
3425 4262 7.158021 TGAAAGAAACAACCACAAAATTCAGT 58.842 30.769 0.00 0.00 0.00 3.41
3430 4267 5.733676 AGCTGAAAGAAACAACCACAAAAT 58.266 33.333 0.00 0.00 34.07 1.82
3437 4274 7.379797 GTCTTTATCAAGCTGAAAGAAACAACC 59.620 37.037 12.40 0.72 40.04 3.77
3439 4276 8.225603 AGTCTTTATCAAGCTGAAAGAAACAA 57.774 30.769 12.40 0.00 40.04 2.83
3478 4315 0.611200 TCCTTGAAGAATCGCCGGAA 59.389 50.000 5.05 0.00 0.00 4.30
3481 4318 1.130561 GGTTTCCTTGAAGAATCGCCG 59.869 52.381 0.00 0.00 0.00 6.46
3494 4331 0.468029 CCAGTGCCAAGTGGTTTCCT 60.468 55.000 0.00 0.00 41.43 3.36
3502 4339 2.311542 TCATATTTCCCCAGTGCCAAGT 59.688 45.455 0.00 0.00 0.00 3.16
3636 4480 3.118992 CGATCATATGACGGTGGGATCAT 60.119 47.826 7.78 0.00 38.99 2.45
3638 4482 2.492088 TCGATCATATGACGGTGGGATC 59.508 50.000 20.15 7.82 0.00 3.36
3646 4490 4.628766 AGCAAATGGATCGATCATATGACG 59.371 41.667 25.93 13.47 0.00 4.35
3652 4496 5.826737 AGAAAGAAGCAAATGGATCGATCAT 59.173 36.000 25.93 14.60 0.00 2.45
3666 4510 1.229428 CGAACCAGCAGAAAGAAGCA 58.771 50.000 0.00 0.00 0.00 3.91
3689 4533 1.394266 CCACAAGCCCACAAGCAGTT 61.394 55.000 0.00 0.00 34.23 3.16
3691 4535 1.799258 GACCACAAGCCCACAAGCAG 61.799 60.000 0.00 0.00 34.23 4.24
3692 4536 1.827789 GACCACAAGCCCACAAGCA 60.828 57.895 0.00 0.00 34.23 3.91
3693 4537 1.181098 ATGACCACAAGCCCACAAGC 61.181 55.000 0.00 0.00 0.00 4.01
3694 4538 0.883833 GATGACCACAAGCCCACAAG 59.116 55.000 0.00 0.00 0.00 3.16
3695 4539 0.888736 CGATGACCACAAGCCCACAA 60.889 55.000 0.00 0.00 0.00 3.33
3696 4540 1.302431 CGATGACCACAAGCCCACA 60.302 57.895 0.00 0.00 0.00 4.17
3697 4541 2.040544 CCGATGACCACAAGCCCAC 61.041 63.158 0.00 0.00 0.00 4.61
3700 4544 3.134127 GGCCGATGACCACAAGCC 61.134 66.667 0.00 0.00 35.05 4.35
3701 4545 3.499737 CGGCCGATGACCACAAGC 61.500 66.667 24.07 0.00 0.00 4.01
3705 4549 4.760047 AGTGCGGCCGATGACCAC 62.760 66.667 33.48 25.94 0.00 4.16
3706 4550 3.545124 AAAGTGCGGCCGATGACCA 62.545 57.895 33.48 14.73 0.00 4.02
3707 4551 2.746277 AAAGTGCGGCCGATGACC 60.746 61.111 33.48 11.67 0.00 4.02
3708 4552 1.970917 CTGAAAGTGCGGCCGATGAC 61.971 60.000 33.48 21.38 0.00 3.06
3709 4553 1.741401 CTGAAAGTGCGGCCGATGA 60.741 57.895 33.48 8.91 0.00 2.92
3710 4554 2.787249 CTGAAAGTGCGGCCGATG 59.213 61.111 33.48 0.00 0.00 3.84
3721 4565 6.272318 TGCAATTCCTGTGTTTTACTGAAAG 58.728 36.000 0.00 0.00 42.29 2.62
3722 4566 6.214191 TGCAATTCCTGTGTTTTACTGAAA 57.786 33.333 0.00 0.00 0.00 2.69
3744 4588 6.757897 TTACTGAAAACCATAGGCAGAATG 57.242 37.500 0.00 0.00 40.87 2.67
3745 4589 7.631377 GCAATTACTGAAAACCATAGGCAGAAT 60.631 37.037 0.00 0.00 0.00 2.40
3746 4590 6.350110 GCAATTACTGAAAACCATAGGCAGAA 60.350 38.462 0.00 0.00 0.00 3.02
3747 4591 5.125417 GCAATTACTGAAAACCATAGGCAGA 59.875 40.000 0.00 0.00 0.00 4.26
3748 4592 5.105797 TGCAATTACTGAAAACCATAGGCAG 60.106 40.000 0.00 0.00 0.00 4.85
3749 4593 4.769488 TGCAATTACTGAAAACCATAGGCA 59.231 37.500 0.00 0.00 0.00 4.75
3750 4594 5.323371 TGCAATTACTGAAAACCATAGGC 57.677 39.130 0.00 0.00 0.00 3.93
3752 4596 6.749118 GCTCTTGCAATTACTGAAAACCATAG 59.251 38.462 0.00 0.00 39.41 2.23
3753 4597 6.620678 GCTCTTGCAATTACTGAAAACCATA 58.379 36.000 0.00 0.00 39.41 2.74
3755 4599 4.870363 GCTCTTGCAATTACTGAAAACCA 58.130 39.130 0.00 0.00 39.41 3.67
3775 4739 0.613853 AGTGGCTCCATGCAATTGCT 60.614 50.000 29.37 13.52 45.15 3.91
3776 4740 0.459585 CAGTGGCTCCATGCAATTGC 60.460 55.000 23.69 23.69 45.15 3.56
3777 4741 0.459585 GCAGTGGCTCCATGCAATTG 60.460 55.000 0.00 0.00 45.15 2.32
3778 4742 1.610554 GGCAGTGGCTCCATGCAATT 61.611 55.000 9.90 0.00 45.15 2.32
3779 4743 2.056223 GGCAGTGGCTCCATGCAAT 61.056 57.895 9.90 0.00 45.15 3.56
3780 4744 2.677524 GGCAGTGGCTCCATGCAA 60.678 61.111 9.90 0.00 45.15 4.08
3781 4745 3.969119 TGGCAGTGGCTCCATGCA 61.969 61.111 18.53 0.00 45.15 3.96
3782 4746 2.541547 TAGTGGCAGTGGCTCCATGC 62.542 60.000 18.53 12.03 40.87 4.06
3783 4747 0.463295 CTAGTGGCAGTGGCTCCATG 60.463 60.000 18.53 3.87 40.87 3.66
3784 4748 1.910722 CTAGTGGCAGTGGCTCCAT 59.089 57.895 18.53 2.12 40.87 3.41
3785 4749 2.959484 GCTAGTGGCAGTGGCTCCA 61.959 63.158 21.81 2.29 41.35 3.86
3786 4750 2.124942 GCTAGTGGCAGTGGCTCC 60.125 66.667 21.81 8.44 41.35 4.70
3800 4764 1.666011 GCCATACCGCTAGCTGCTA 59.334 57.895 13.93 9.34 40.11 3.49
3806 4770 1.672356 GCCATGGCCATACCGCTAG 60.672 63.158 27.24 3.68 43.94 3.42
3807 4771 1.988982 TTGCCATGGCCATACCGCTA 61.989 55.000 33.44 14.12 43.94 4.26
3808 4772 2.645394 ATTGCCATGGCCATACCGCT 62.645 55.000 33.44 3.67 43.94 5.52
3809 4773 2.202395 ATTGCCATGGCCATACCGC 61.202 57.895 33.44 19.94 43.94 5.68
3810 4774 1.108727 ACATTGCCATGGCCATACCG 61.109 55.000 33.44 18.09 43.94 4.02
3811 4775 1.993956 TACATTGCCATGGCCATACC 58.006 50.000 33.44 12.82 41.09 2.73
3812 4776 2.958355 ACTTACATTGCCATGGCCATAC 59.042 45.455 33.44 14.49 41.09 2.39
3813 4777 3.311167 ACTTACATTGCCATGGCCATA 57.689 42.857 33.44 19.07 41.09 2.74
3814 4778 2.163810 ACTTACATTGCCATGGCCAT 57.836 45.000 33.44 25.50 41.09 4.40
3815 4779 2.291217 TGTACTTACATTGCCATGGCCA 60.291 45.455 33.44 24.27 41.09 5.36
3816 4780 2.358898 CTGTACTTACATTGCCATGGCC 59.641 50.000 33.44 16.23 36.53 5.36
3817 4781 3.278574 TCTGTACTTACATTGCCATGGC 58.721 45.455 30.54 30.54 37.31 4.40
3818 4782 3.313526 GCTCTGTACTTACATTGCCATGG 59.686 47.826 7.63 7.63 35.36 3.66
3819 4783 3.001634 CGCTCTGTACTTACATTGCCATG 59.998 47.826 0.00 0.00 35.36 3.66
3820 4784 3.198068 CGCTCTGTACTTACATTGCCAT 58.802 45.455 0.00 0.00 35.36 4.40
3821 4785 2.616960 CGCTCTGTACTTACATTGCCA 58.383 47.619 0.00 0.00 35.36 4.92
3822 4786 1.933853 CCGCTCTGTACTTACATTGCC 59.066 52.381 0.00 0.00 35.36 4.52
3823 4787 1.933853 CCCGCTCTGTACTTACATTGC 59.066 52.381 0.00 0.00 35.36 3.56
3824 4788 2.930040 CACCCGCTCTGTACTTACATTG 59.070 50.000 0.00 0.00 35.36 2.82
3825 4789 2.565834 ACACCCGCTCTGTACTTACATT 59.434 45.455 0.00 0.00 35.36 2.71
3826 4790 2.176889 ACACCCGCTCTGTACTTACAT 58.823 47.619 0.00 0.00 35.36 2.29
3835 4799 3.431055 TTGCAAACACCCGCTCTG 58.569 55.556 0.00 0.00 0.00 3.35
3876 4840 2.095008 CACAGAGACAGACAGCACGTAT 60.095 50.000 0.00 0.00 0.00 3.06
3884 4848 1.123077 AACCAGCACAGAGACAGACA 58.877 50.000 0.00 0.00 0.00 3.41
3887 4851 1.869767 GTGAAACCAGCACAGAGACAG 59.130 52.381 0.00 0.00 36.31 3.51
3897 4861 2.970324 TCACGCCGTGAAACCAGC 60.970 61.111 18.96 0.00 39.78 4.85
3908 4872 0.248215 CCGCATGAATTCTTCACGCC 60.248 55.000 7.05 0.00 45.30 5.68
3916 4880 1.202417 TCGTCTCCTCCGCATGAATTC 60.202 52.381 0.00 0.00 0.00 2.17
3922 4886 0.467474 TACCATCGTCTCCTCCGCAT 60.467 55.000 0.00 0.00 0.00 4.73
3924 4888 0.818445 TCTACCATCGTCTCCTCCGC 60.818 60.000 0.00 0.00 0.00 5.54
3926 4890 1.950909 CTGTCTACCATCGTCTCCTCC 59.049 57.143 0.00 0.00 0.00 4.30
3930 4894 2.753452 TGAACCTGTCTACCATCGTCTC 59.247 50.000 0.00 0.00 0.00 3.36
3931 4895 2.755655 CTGAACCTGTCTACCATCGTCT 59.244 50.000 0.00 0.00 0.00 4.18
3933 4897 2.755655 CTCTGAACCTGTCTACCATCGT 59.244 50.000 0.00 0.00 0.00 3.73
3934 4898 2.755655 ACTCTGAACCTGTCTACCATCG 59.244 50.000 0.00 0.00 0.00 3.84
3935 4899 4.499183 CAACTCTGAACCTGTCTACCATC 58.501 47.826 0.00 0.00 0.00 3.51
3936 4900 3.261897 CCAACTCTGAACCTGTCTACCAT 59.738 47.826 0.00 0.00 0.00 3.55
3937 4901 2.632996 CCAACTCTGAACCTGTCTACCA 59.367 50.000 0.00 0.00 0.00 3.25
3938 4902 2.633481 ACCAACTCTGAACCTGTCTACC 59.367 50.000 0.00 0.00 0.00 3.18
3939 4903 4.058817 CAACCAACTCTGAACCTGTCTAC 58.941 47.826 0.00 0.00 0.00 2.59
3941 4905 2.158755 CCAACCAACTCTGAACCTGTCT 60.159 50.000 0.00 0.00 0.00 3.41
3942 4906 2.222027 CCAACCAACTCTGAACCTGTC 58.778 52.381 0.00 0.00 0.00 3.51
3943 4907 1.750682 GCCAACCAACTCTGAACCTGT 60.751 52.381 0.00 0.00 0.00 4.00
3944 4908 0.954452 GCCAACCAACTCTGAACCTG 59.046 55.000 0.00 0.00 0.00 4.00
3945 4909 0.550914 TGCCAACCAACTCTGAACCT 59.449 50.000 0.00 0.00 0.00 3.50
3967 4956 0.666274 GTCGTCTTGGTGCACATCGA 60.666 55.000 20.43 16.27 0.00 3.59
3979 4968 0.107410 TTGCACCTGTTGGTCGTCTT 60.107 50.000 0.00 0.00 46.60 3.01
3980 4969 0.107410 TTTGCACCTGTTGGTCGTCT 60.107 50.000 0.00 0.00 46.60 4.18
3989 4978 1.064758 TCCACTGAAGTTTGCACCTGT 60.065 47.619 0.00 0.00 0.00 4.00
3994 4983 2.727123 TCCTTCCACTGAAGTTTGCA 57.273 45.000 2.03 0.00 45.45 4.08
3996 4985 5.474532 TCATCATTCCTTCCACTGAAGTTTG 59.525 40.000 2.03 0.00 45.45 2.93
3997 4986 5.634118 TCATCATTCCTTCCACTGAAGTTT 58.366 37.500 2.03 0.00 45.45 2.66
3998 4987 5.246981 TCATCATTCCTTCCACTGAAGTT 57.753 39.130 2.03 0.00 45.45 2.66
4000 4989 4.197750 CCTCATCATTCCTTCCACTGAAG 58.802 47.826 0.00 0.00 46.29 3.02
4003 4992 2.507058 TCCCTCATCATTCCTTCCACTG 59.493 50.000 0.00 0.00 0.00 3.66
4008 4997 1.846439 TGGGTCCCTCATCATTCCTTC 59.154 52.381 10.00 0.00 0.00 3.46
4014 5003 7.256399 TCTATATAACTTGGGTCCCTCATCAT 58.744 38.462 10.00 0.01 0.00 2.45
4077 5091 0.801251 CTGGCTCTTTCCTTGCTTCG 59.199 55.000 0.00 0.00 0.00 3.79
4085 5099 3.435186 GCGGTGCTGGCTCTTTCC 61.435 66.667 0.00 0.00 0.00 3.13
4104 5118 2.576648 AGTTTATCTCCAGGACAACCCC 59.423 50.000 0.00 0.00 36.73 4.95
4105 5119 5.368989 CATAGTTTATCTCCAGGACAACCC 58.631 45.833 0.00 0.00 36.73 4.11
4117 5131 1.853319 GCGCGCGCATAGTTTATCT 59.147 52.632 46.11 0.00 41.49 1.98
4134 5148 2.124695 CCAAGCTTAGTCGGGGGC 60.125 66.667 0.00 0.00 0.00 5.80
4138 5152 0.320771 AGTGTGCCAAGCTTAGTCGG 60.321 55.000 0.00 0.00 0.00 4.79
4139 5153 1.071605 GAGTGTGCCAAGCTTAGTCG 58.928 55.000 0.00 0.00 0.00 4.18
4140 5154 1.071605 CGAGTGTGCCAAGCTTAGTC 58.928 55.000 0.00 0.00 0.00 2.59
4141 5155 0.393077 ACGAGTGTGCCAAGCTTAGT 59.607 50.000 0.00 0.00 0.00 2.24
4142 5156 1.071605 GACGAGTGTGCCAAGCTTAG 58.928 55.000 0.00 0.00 0.00 2.18
4143 5157 0.391228 TGACGAGTGTGCCAAGCTTA 59.609 50.000 0.00 0.00 0.00 3.09
4144 5158 0.882042 CTGACGAGTGTGCCAAGCTT 60.882 55.000 0.00 0.00 0.00 3.74
4168 5459 5.692613 AATGTTTGGAAATTCGGACGTAA 57.307 34.783 0.00 0.00 0.00 3.18
4169 5460 5.692613 AAATGTTTGGAAATTCGGACGTA 57.307 34.783 0.00 0.00 0.00 3.57
4183 5477 9.919348 CTGAAATTCAGGTTACAAAAATGTTTG 57.081 29.630 14.85 6.82 43.54 2.93
4185 5479 9.533253 CTCTGAAATTCAGGTTACAAAAATGTT 57.467 29.630 21.35 0.00 44.39 2.71
4187 5481 9.918630 ATCTCTGAAATTCAGGTTACAAAAATG 57.081 29.630 21.35 0.00 44.39 2.32
4192 5486 7.064609 CGCTTATCTCTGAAATTCAGGTTACAA 59.935 37.037 21.35 9.54 44.39 2.41
4193 5487 6.535150 CGCTTATCTCTGAAATTCAGGTTACA 59.465 38.462 21.35 2.46 44.39 2.41
4194 5488 6.510317 GCGCTTATCTCTGAAATTCAGGTTAC 60.510 42.308 21.35 5.86 44.39 2.50
4195 5489 5.523916 GCGCTTATCTCTGAAATTCAGGTTA 59.476 40.000 21.35 8.82 44.39 2.85
4198 5492 4.025061 CAGCGCTTATCTCTGAAATTCAGG 60.025 45.833 21.35 12.80 44.39 3.86
4199 5493 4.807834 TCAGCGCTTATCTCTGAAATTCAG 59.192 41.667 16.39 16.39 45.59 3.02
4200 5494 4.758688 TCAGCGCTTATCTCTGAAATTCA 58.241 39.130 7.50 0.00 33.92 2.57
4201 5495 5.725110 TTCAGCGCTTATCTCTGAAATTC 57.275 39.130 7.50 0.00 41.87 2.17
4206 5500 4.662468 ATCTTTCAGCGCTTATCTCTGA 57.338 40.909 7.50 0.00 34.95 3.27
4208 5502 6.018343 GCTAAAATCTTTCAGCGCTTATCTCT 60.018 38.462 7.50 0.00 0.00 3.10
4211 5505 5.906285 CAGCTAAAATCTTTCAGCGCTTATC 59.094 40.000 7.50 0.00 39.04 1.75
4212 5506 5.586243 TCAGCTAAAATCTTTCAGCGCTTAT 59.414 36.000 7.50 0.00 39.04 1.73
4215 5509 3.338249 TCAGCTAAAATCTTTCAGCGCT 58.662 40.909 2.64 2.64 39.04 5.92
4217 5511 4.867047 TCTCTCAGCTAAAATCTTTCAGCG 59.133 41.667 0.00 0.00 39.04 5.18
4223 5517 8.519526 CGGTATCTATCTCTCAGCTAAAATCTT 58.480 37.037 0.00 0.00 0.00 2.40
4224 5518 7.668052 ACGGTATCTATCTCTCAGCTAAAATCT 59.332 37.037 0.00 0.00 0.00 2.40
4225 5519 7.822658 ACGGTATCTATCTCTCAGCTAAAATC 58.177 38.462 0.00 0.00 0.00 2.17
4237 5601 5.558818 TCTTCACCCTACGGTATCTATCTC 58.441 45.833 0.00 0.00 42.04 2.75
4242 5606 4.543689 TGAATCTTCACCCTACGGTATCT 58.456 43.478 0.00 0.00 42.04 1.98
4243 5607 4.583489 TCTGAATCTTCACCCTACGGTATC 59.417 45.833 0.00 0.00 42.04 2.24
4244 5608 4.543689 TCTGAATCTTCACCCTACGGTAT 58.456 43.478 0.00 0.00 42.04 2.73
4245 5609 3.952323 CTCTGAATCTTCACCCTACGGTA 59.048 47.826 0.00 0.00 42.04 4.02
4246 5610 2.761208 CTCTGAATCTTCACCCTACGGT 59.239 50.000 0.00 0.00 46.31 4.83
4259 5623 3.055530 TCCAGGTTCTGCTTCTCTGAATC 60.056 47.826 0.00 0.00 35.54 2.52
4260 5624 2.909006 TCCAGGTTCTGCTTCTCTGAAT 59.091 45.455 0.00 0.00 35.54 2.57
4261 5625 2.329267 TCCAGGTTCTGCTTCTCTGAA 58.671 47.619 0.00 0.00 0.00 3.02
4262 5626 2.015456 TCCAGGTTCTGCTTCTCTGA 57.985 50.000 0.00 0.00 0.00 3.27
4263 5627 2.847327 TTCCAGGTTCTGCTTCTCTG 57.153 50.000 0.00 0.00 0.00 3.35
4264 5628 3.198853 GGTATTCCAGGTTCTGCTTCTCT 59.801 47.826 0.00 0.00 0.00 3.10
4265 5629 3.536570 GGTATTCCAGGTTCTGCTTCTC 58.463 50.000 0.00 0.00 0.00 2.87
4266 5630 2.093447 CGGTATTCCAGGTTCTGCTTCT 60.093 50.000 0.00 0.00 0.00 2.85
4267 5631 2.280628 CGGTATTCCAGGTTCTGCTTC 58.719 52.381 0.00 0.00 0.00 3.86
4268 5632 1.628846 ACGGTATTCCAGGTTCTGCTT 59.371 47.619 0.00 0.00 0.00 3.91
4269 5633 1.276622 ACGGTATTCCAGGTTCTGCT 58.723 50.000 0.00 0.00 0.00 4.24
4270 5634 2.483188 CCTACGGTATTCCAGGTTCTGC 60.483 54.545 0.00 0.00 0.00 4.26
4271 5635 2.102588 CCCTACGGTATTCCAGGTTCTG 59.897 54.545 0.00 0.00 0.00 3.02
4272 5636 2.292719 ACCCTACGGTATTCCAGGTTCT 60.293 50.000 0.00 0.00 42.18 3.01
4273 5637 2.113807 ACCCTACGGTATTCCAGGTTC 58.886 52.381 0.00 0.00 42.18 3.62
4274 5638 1.835531 CACCCTACGGTATTCCAGGTT 59.164 52.381 0.00 0.00 42.04 3.50
4275 5639 1.007479 TCACCCTACGGTATTCCAGGT 59.993 52.381 0.00 0.00 42.04 4.00
4276 5640 1.784358 TCACCCTACGGTATTCCAGG 58.216 55.000 0.00 0.00 42.04 4.45
4277 5641 3.028850 TCTTCACCCTACGGTATTCCAG 58.971 50.000 0.00 0.00 42.04 3.86
4278 5642 3.104519 TCTTCACCCTACGGTATTCCA 57.895 47.619 0.00 0.00 42.04 3.53
4279 5643 4.100498 TGAATCTTCACCCTACGGTATTCC 59.900 45.833 0.00 0.00 42.04 3.01
4280 5644 5.068723 TCTGAATCTTCACCCTACGGTATTC 59.931 44.000 0.00 0.00 42.04 1.75
4281 5645 4.960469 TCTGAATCTTCACCCTACGGTATT 59.040 41.667 0.00 0.00 42.04 1.89
4282 5646 4.543689 TCTGAATCTTCACCCTACGGTAT 58.456 43.478 0.00 0.00 42.04 2.73
4283 5647 3.952323 CTCTGAATCTTCACCCTACGGTA 59.048 47.826 0.00 0.00 42.04 4.02
4284 5648 2.761208 CTCTGAATCTTCACCCTACGGT 59.239 50.000 0.00 0.00 46.31 4.83
4285 5649 3.024547 TCTCTGAATCTTCACCCTACGG 58.975 50.000 0.00 0.00 32.90 4.02
4286 5650 4.677584 CTTCTCTGAATCTTCACCCTACG 58.322 47.826 0.00 0.00 32.90 3.51
4287 5651 4.081420 TGCTTCTCTGAATCTTCACCCTAC 60.081 45.833 0.00 0.00 32.90 3.18
4288 5652 4.096681 TGCTTCTCTGAATCTTCACCCTA 58.903 43.478 0.00 0.00 32.90 3.53
4289 5653 2.909006 TGCTTCTCTGAATCTTCACCCT 59.091 45.455 0.00 0.00 32.90 4.34
4290 5654 3.055530 TCTGCTTCTCTGAATCTTCACCC 60.056 47.826 0.00 0.00 32.90 4.61
4291 5655 4.199432 TCTGCTTCTCTGAATCTTCACC 57.801 45.455 0.00 0.00 32.90 4.02
4292 5656 4.391523 GGTTCTGCTTCTCTGAATCTTCAC 59.608 45.833 0.00 0.00 35.54 3.18
4297 5661 3.055530 TCCAGGTTCTGCTTCTCTGAATC 60.056 47.826 0.00 0.00 35.54 2.52
4305 5669 2.155279 GAGGTTTCCAGGTTCTGCTTC 58.845 52.381 0.00 0.00 0.00 3.86
4308 5672 0.955919 CCGAGGTTTCCAGGTTCTGC 60.956 60.000 0.00 0.00 0.00 4.26
4313 5677 2.852075 TGCCCGAGGTTTCCAGGT 60.852 61.111 0.00 0.00 0.00 4.00
4318 5682 0.390472 CAGAGAGTGCCCGAGGTTTC 60.390 60.000 0.00 0.00 0.00 2.78
4320 5684 3.382111 CAGAGAGTGCCCGAGGTT 58.618 61.111 0.00 0.00 0.00 3.50
4353 5717 3.251729 TCTTCAACAGTTTGCAGAGCATC 59.748 43.478 0.00 0.00 38.76 3.91
4354 5718 3.216800 TCTTCAACAGTTTGCAGAGCAT 58.783 40.909 0.00 0.00 38.76 3.79
4355 5719 2.642427 TCTTCAACAGTTTGCAGAGCA 58.358 42.857 0.00 0.00 30.98 4.26
4356 5720 3.911661 ATCTTCAACAGTTTGCAGAGC 57.088 42.857 0.00 0.00 38.23 4.09
4357 5721 4.143030 CGGTATCTTCAACAGTTTGCAGAG 60.143 45.833 0.00 0.00 38.23 3.35
4358 5722 3.745975 CGGTATCTTCAACAGTTTGCAGA 59.254 43.478 0.00 0.00 39.02 4.26
4359 5723 3.745975 TCGGTATCTTCAACAGTTTGCAG 59.254 43.478 0.00 0.00 32.17 4.41
4360 5724 3.734463 TCGGTATCTTCAACAGTTTGCA 58.266 40.909 0.00 0.00 32.17 4.08
4361 5725 4.742438 TTCGGTATCTTCAACAGTTTGC 57.258 40.909 0.00 0.00 32.17 3.68
4362 5726 6.480524 TGATTCGGTATCTTCAACAGTTTG 57.519 37.500 0.00 0.00 34.17 2.93
4363 5727 6.878923 TCATGATTCGGTATCTTCAACAGTTT 59.121 34.615 0.00 0.00 34.17 2.66
4364 5728 6.406370 TCATGATTCGGTATCTTCAACAGTT 58.594 36.000 0.00 0.00 34.17 3.16
4365 5729 5.977635 TCATGATTCGGTATCTTCAACAGT 58.022 37.500 0.00 0.00 34.17 3.55
4366 5730 5.050499 GCTCATGATTCGGTATCTTCAACAG 60.050 44.000 0.00 0.00 34.17 3.16
4367 5731 4.811024 GCTCATGATTCGGTATCTTCAACA 59.189 41.667 0.00 0.00 34.17 3.33
4368 5732 4.084849 CGCTCATGATTCGGTATCTTCAAC 60.085 45.833 0.00 0.00 34.17 3.18
4369 5733 4.051237 CGCTCATGATTCGGTATCTTCAA 58.949 43.478 0.00 0.00 34.17 2.69
4370 5734 3.552890 CCGCTCATGATTCGGTATCTTCA 60.553 47.826 21.64 0.00 38.47 3.02
4371 5735 2.989840 CCGCTCATGATTCGGTATCTTC 59.010 50.000 21.64 0.00 38.47 2.87
4372 5736 2.868044 GCCGCTCATGATTCGGTATCTT 60.868 50.000 26.90 0.00 44.58 2.40
4373 5737 1.337260 GCCGCTCATGATTCGGTATCT 60.337 52.381 26.90 0.00 44.58 1.98
4374 5738 1.071605 GCCGCTCATGATTCGGTATC 58.928 55.000 26.90 13.98 44.58 2.24
4375 5739 0.392706 TGCCGCTCATGATTCGGTAT 59.607 50.000 26.90 0.00 44.58 2.73
4376 5740 0.249447 CTGCCGCTCATGATTCGGTA 60.249 55.000 26.90 23.60 44.58 4.02
4377 5741 1.522355 CTGCCGCTCATGATTCGGT 60.522 57.895 26.90 0.00 44.58 4.69
4378 5742 1.220169 CTCTGCCGCTCATGATTCGG 61.220 60.000 24.17 24.17 45.46 4.30
4379 5743 1.220169 CCTCTGCCGCTCATGATTCG 61.220 60.000 0.00 3.06 0.00 3.34
4380 5744 0.883814 CCCTCTGCCGCTCATGATTC 60.884 60.000 0.00 0.00 0.00 2.52
4381 5745 1.147824 CCCTCTGCCGCTCATGATT 59.852 57.895 0.00 0.00 0.00 2.57
4382 5746 2.815945 CCCCTCTGCCGCTCATGAT 61.816 63.158 0.00 0.00 0.00 2.45
4383 5747 3.473647 CCCCTCTGCCGCTCATGA 61.474 66.667 0.00 0.00 0.00 3.07
4384 5748 2.937379 CTTCCCCTCTGCCGCTCATG 62.937 65.000 0.00 0.00 0.00 3.07
4385 5749 2.688666 TTCCCCTCTGCCGCTCAT 60.689 61.111 0.00 0.00 0.00 2.90
4386 5750 3.393970 CTTCCCCTCTGCCGCTCA 61.394 66.667 0.00 0.00 0.00 4.26
4387 5751 3.077556 TCTTCCCCTCTGCCGCTC 61.078 66.667 0.00 0.00 0.00 5.03
4388 5752 3.080121 CTCTTCCCCTCTGCCGCT 61.080 66.667 0.00 0.00 0.00 5.52
4389 5753 4.168291 CCTCTTCCCCTCTGCCGC 62.168 72.222 0.00 0.00 0.00 6.53
4390 5754 2.364317 TCCTCTTCCCCTCTGCCG 60.364 66.667 0.00 0.00 0.00 5.69
4391 5755 2.726351 CGTCCTCTTCCCCTCTGCC 61.726 68.421 0.00 0.00 0.00 4.85
4392 5756 2.726351 CCGTCCTCTTCCCCTCTGC 61.726 68.421 0.00 0.00 0.00 4.26
4393 5757 2.726351 GCCGTCCTCTTCCCCTCTG 61.726 68.421 0.00 0.00 0.00 3.35
4394 5758 2.364448 GCCGTCCTCTTCCCCTCT 60.364 66.667 0.00 0.00 0.00 3.69
4398 5762 0.825010 TATACGGCCGTCCTCTTCCC 60.825 60.000 38.01 0.00 0.00 3.97
4406 5770 3.893803 CGTCGTTATACGGCCGTC 58.106 61.111 38.01 20.03 44.43 4.79
4415 5779 4.860261 GCGCCCGTCCGTCGTTAT 62.860 66.667 0.00 0.00 37.94 1.89
4434 5798 1.154205 AACGTGCCGCTCTATCATGC 61.154 55.000 0.00 0.00 0.00 4.06
4435 5799 0.855349 GAACGTGCCGCTCTATCATG 59.145 55.000 0.00 0.00 0.00 3.07
4436 5800 0.249489 GGAACGTGCCGCTCTATCAT 60.249 55.000 0.00 0.00 0.00 2.45
4437 5801 1.141019 GGAACGTGCCGCTCTATCA 59.859 57.895 0.00 0.00 0.00 2.15
4438 5802 4.014065 GGAACGTGCCGCTCTATC 57.986 61.111 0.00 0.00 0.00 2.08
4492 5869 1.827344 ACTGACAATGAGATGCGGAGA 59.173 47.619 0.00 0.00 0.00 3.71
4499 5876 3.369892 CCGAGGGAAACTGACAATGAGAT 60.370 47.826 0.00 0.00 0.00 2.75
4504 5881 0.322546 GGCCGAGGGAAACTGACAAT 60.323 55.000 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.