Multiple sequence alignment - TraesCS4D01G308800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G308800 chr4D 100.000 3366 0 0 1 3366 476877565 476874200 0.000000e+00 6216.0
1 TraesCS4D01G308800 chr4B 90.387 1602 104 31 1 1579 601101154 601099580 0.000000e+00 2060.0
2 TraesCS4D01G308800 chr4B 95.964 768 16 14 1613 2379 601099581 601098828 0.000000e+00 1232.0
3 TraesCS4D01G308800 chr4B 85.693 671 31 21 2376 2995 601098779 601098123 0.000000e+00 647.0
4 TraesCS4D01G308800 chr4A 97.459 669 17 0 1613 2281 683617645 683616977 0.000000e+00 1142.0
5 TraesCS4D01G308800 chr4A 85.789 950 52 25 682 1579 683618562 683617644 0.000000e+00 929.0
6 TraesCS4D01G308800 chr4A 82.517 429 30 14 1 429 683619147 683618764 5.380000e-88 335.0
7 TraesCS4D01G308800 chr4A 85.223 291 20 8 2710 2993 683616326 683616052 9.200000e-71 278.0
8 TraesCS4D01G308800 chr4A 87.006 177 11 9 2495 2671 683616800 683616636 4.430000e-44 189.0
9 TraesCS4D01G308800 chr3D 96.620 355 8 1 2153 2503 91053037 91053391 1.350000e-163 586.0
10 TraesCS4D01G308800 chr3D 80.635 630 112 8 1655 2276 612273139 612272512 2.350000e-131 479.0
11 TraesCS4D01G308800 chr3D 97.273 110 1 2 2048 2156 91053046 91052938 5.740000e-43 185.0
12 TraesCS4D01G308800 chr3D 88.333 60 7 0 3011 3070 588495987 588496046 4.660000e-09 73.1
13 TraesCS4D01G308800 chr3B 81.221 639 109 9 1647 2276 826725307 826725943 3.880000e-139 505.0
14 TraesCS4D01G308800 chr3A 81.260 635 108 9 1651 2276 746918142 746917510 1.390000e-138 503.0
15 TraesCS4D01G308800 chr2D 80.534 262 46 4 1959 2216 474898829 474898569 2.650000e-46 196.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G308800 chr4D 476874200 476877565 3365 True 6216.0 6216 100.000000 1 3366 1 chr4D.!!$R1 3365
1 TraesCS4D01G308800 chr4B 601098123 601101154 3031 True 1313.0 2060 90.681333 1 2995 3 chr4B.!!$R1 2994
2 TraesCS4D01G308800 chr4A 683616052 683619147 3095 True 574.6 1142 87.598800 1 2993 5 chr4A.!!$R1 2992
3 TraesCS4D01G308800 chr3D 612272512 612273139 627 True 479.0 479 80.635000 1655 2276 1 chr3D.!!$R2 621
4 TraesCS4D01G308800 chr3B 826725307 826725943 636 False 505.0 505 81.221000 1647 2276 1 chr3B.!!$F1 629
5 TraesCS4D01G308800 chr3A 746917510 746918142 632 True 503.0 503 81.260000 1651 2276 1 chr3A.!!$R1 625

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
482 487 0.035152 ACCACATGGCACGATCACAT 60.035 50.0 0.0 0.0 39.32 3.21 F
490 495 0.527600 GCACGATCACATGAGCCGTA 60.528 55.0 0.0 0.0 36.19 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1524 1606 0.035630 CTTGTGGGCAGAAGCTAGCT 60.036 55.0 12.68 12.68 41.70 3.32 R
2449 2628 0.110192 GCTTTTACAGCTCCACGCAC 60.110 55.0 0.00 0.00 46.27 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
211 212 1.226542 CATCCATCCCACAGCAGCT 59.773 57.895 0.00 0.00 0.00 4.24
302 303 3.748048 GCTCACTTTAATCAGCACAGTGA 59.252 43.478 4.15 4.36 41.21 3.41
314 315 2.154854 CACAGTGAGTGTTCCATCGT 57.845 50.000 0.00 0.00 43.40 3.73
345 346 5.461526 GCAGTTAACCTCATCAGGAAAAAC 58.538 41.667 0.88 0.00 43.65 2.43
354 355 5.474532 CCTCATCAGGAAAAACATCACAAGA 59.525 40.000 0.00 0.00 43.65 3.02
356 357 7.345422 TCATCAGGAAAAACATCACAAGAAA 57.655 32.000 0.00 0.00 0.00 2.52
405 406 0.596577 GGCTTCTCCGTTTTTCACCC 59.403 55.000 0.00 0.00 0.00 4.61
410 411 1.065345 TCTCCGTTTTTCACCCACACA 60.065 47.619 0.00 0.00 0.00 3.72
429 430 4.393680 ACACAAAAGTGTCTCGTTTTGCTA 59.606 37.500 7.31 0.00 44.18 3.49
430 431 4.963953 CACAAAAGTGTCTCGTTTTGCTAG 59.036 41.667 7.31 0.00 44.18 3.42
431 432 4.873827 ACAAAAGTGTCTCGTTTTGCTAGA 59.126 37.500 7.31 0.00 44.18 2.43
466 471 0.829333 ACATTTTGGCACTTGCACCA 59.171 45.000 3.15 0.00 44.36 4.17
482 487 0.035152 ACCACATGGCACGATCACAT 60.035 50.000 0.00 0.00 39.32 3.21
490 495 0.527600 GCACGATCACATGAGCCGTA 60.528 55.000 0.00 0.00 36.19 4.02
491 496 1.869754 GCACGATCACATGAGCCGTAT 60.870 52.381 0.00 0.00 36.19 3.06
493 498 1.409064 ACGATCACATGAGCCGTATGT 59.591 47.619 0.00 0.00 39.23 2.29
555 562 1.952621 TCCCTTCATTTCCGGAGAGT 58.047 50.000 3.34 0.00 0.00 3.24
655 663 9.899226 AAAAAGAAAACATTATCTTCTCTTCCG 57.101 29.630 0.00 0.00 34.90 4.30
682 690 4.700213 CCATCAATTTCCGAAACTACCAGT 59.300 41.667 0.00 0.00 0.00 4.00
683 691 5.878116 CCATCAATTTCCGAAACTACCAGTA 59.122 40.000 0.00 0.00 0.00 2.74
684 692 6.037172 CCATCAATTTCCGAAACTACCAGTAG 59.963 42.308 3.25 3.25 39.04 2.57
696 734 3.641906 ACTACCAGTAGCACACACTTTCT 59.358 43.478 4.72 0.00 36.66 2.52
736 774 1.069358 TGTTTCCCAAAAATCGCACCC 59.931 47.619 0.00 0.00 0.00 4.61
948 999 3.374402 CGACTCCGGCCAGTCAGT 61.374 66.667 20.04 7.46 42.75 3.41
975 1033 0.744771 TCTTCTCTAGCGAGCGAGCA 60.745 55.000 9.01 0.00 40.15 4.26
994 1052 2.291856 AGCTAGGCTTGGAGGTGAC 58.708 57.895 0.00 0.00 33.89 3.67
1145 1207 2.155279 GGCCTTCAGTGAGTTTCTTCC 58.845 52.381 0.00 0.00 0.00 3.46
1158 1220 6.423604 GTGAGTTTCTTCCTCTTTCTTCTCAG 59.576 42.308 0.00 0.00 0.00 3.35
1161 1223 3.157881 TCTTCCTCTTTCTTCTCAGCGA 58.842 45.455 0.00 0.00 0.00 4.93
1172 1234 9.653287 TCTTTCTTCTCAGCGATTAATTCTTTA 57.347 29.630 0.00 0.00 0.00 1.85
1187 1249 3.232213 TCTTTACATCACCACTCGCTC 57.768 47.619 0.00 0.00 0.00 5.03
1197 1259 4.121669 ACTCGCTCGCTCGCATGT 62.122 61.111 0.00 0.00 0.00 3.21
1270 1332 7.836183 TCATCATAATGGATAGCTAGCTAGTGA 59.164 37.037 27.42 19.97 33.42 3.41
1271 1333 7.637631 TCATAATGGATAGCTAGCTAGTGAG 57.362 40.000 27.42 12.71 31.45 3.51
1289 1351 0.892358 AGCGTACGACAAGACAGGGA 60.892 55.000 21.65 0.00 0.00 4.20
1370 1452 4.381292 GCGTTACCAGTAGCCTAGAGAAAA 60.381 45.833 0.00 0.00 0.00 2.29
1371 1453 5.681695 GCGTTACCAGTAGCCTAGAGAAAAT 60.682 44.000 0.00 0.00 0.00 1.82
1400 1482 4.702131 CAGAAAGGAGTAGGGTTTGATTGG 59.298 45.833 0.00 0.00 0.00 3.16
1402 1484 3.721087 AGGAGTAGGGTTTGATTGGTG 57.279 47.619 0.00 0.00 0.00 4.17
1450 1532 1.815003 CAGAATGACCAGTTTGCCCTC 59.185 52.381 0.00 0.00 39.69 4.30
1484 1566 4.467769 GAGAATCCCATGTGGTGAATCAT 58.532 43.478 0.00 0.00 34.77 2.45
1501 1583 3.510388 TCATCAGTAGCTTCTGTTCCG 57.490 47.619 18.55 7.30 36.85 4.30
1521 1603 2.881539 ATCGAGCCTGCCACCATGTG 62.882 60.000 0.00 0.00 0.00 3.21
1522 1604 3.446570 GAGCCTGCCACCATGTGC 61.447 66.667 0.00 0.00 31.34 4.57
1523 1605 3.933048 GAGCCTGCCACCATGTGCT 62.933 63.158 0.00 0.00 31.34 4.40
1524 1606 2.045045 GCCTGCCACCATGTGCTA 60.045 61.111 0.00 0.00 31.34 3.49
1557 1640 3.740832 GCCCACAAGTAGCAAAAATTGAC 59.259 43.478 1.71 0.00 0.00 3.18
1579 1667 0.675083 CTTGCCACATTTGCACCAGA 59.325 50.000 0.00 0.00 38.72 3.86
1580 1668 1.068895 CTTGCCACATTTGCACCAGAA 59.931 47.619 0.00 0.00 38.72 3.02
1581 1669 1.340088 TGCCACATTTGCACCAGAAT 58.660 45.000 0.00 0.00 32.85 2.40
1582 1670 1.693062 TGCCACATTTGCACCAGAATT 59.307 42.857 0.00 0.00 32.85 2.17
1583 1671 2.896044 TGCCACATTTGCACCAGAATTA 59.104 40.909 0.00 0.00 32.85 1.40
1584 1672 3.323115 TGCCACATTTGCACCAGAATTAA 59.677 39.130 0.00 0.00 32.85 1.40
1585 1673 3.679502 GCCACATTTGCACCAGAATTAAC 59.320 43.478 0.00 0.00 0.00 2.01
1586 1674 4.798924 GCCACATTTGCACCAGAATTAACA 60.799 41.667 0.00 0.00 0.00 2.41
1587 1675 5.295950 CCACATTTGCACCAGAATTAACAA 58.704 37.500 0.00 0.00 0.00 2.83
1588 1676 5.177327 CCACATTTGCACCAGAATTAACAAC 59.823 40.000 0.00 0.00 0.00 3.32
1589 1677 5.177327 CACATTTGCACCAGAATTAACAACC 59.823 40.000 0.00 0.00 0.00 3.77
1590 1678 4.329462 TTTGCACCAGAATTAACAACCC 57.671 40.909 0.00 0.00 0.00 4.11
1591 1679 2.950781 TGCACCAGAATTAACAACCCA 58.049 42.857 0.00 0.00 0.00 4.51
1592 1680 2.890311 TGCACCAGAATTAACAACCCAG 59.110 45.455 0.00 0.00 0.00 4.45
1593 1681 3.153919 GCACCAGAATTAACAACCCAGA 58.846 45.455 0.00 0.00 0.00 3.86
1594 1682 3.763897 GCACCAGAATTAACAACCCAGAT 59.236 43.478 0.00 0.00 0.00 2.90
1595 1683 4.220602 GCACCAGAATTAACAACCCAGATT 59.779 41.667 0.00 0.00 0.00 2.40
1596 1684 5.279456 GCACCAGAATTAACAACCCAGATTT 60.279 40.000 0.00 0.00 0.00 2.17
1597 1685 6.389906 CACCAGAATTAACAACCCAGATTTC 58.610 40.000 0.00 0.00 0.00 2.17
1598 1686 5.183140 ACCAGAATTAACAACCCAGATTTCG 59.817 40.000 0.00 0.00 0.00 3.46
1599 1687 5.095490 CAGAATTAACAACCCAGATTTCGC 58.905 41.667 0.00 0.00 0.00 4.70
1600 1688 5.010282 AGAATTAACAACCCAGATTTCGCT 58.990 37.500 0.00 0.00 0.00 4.93
1601 1689 6.093495 CAGAATTAACAACCCAGATTTCGCTA 59.907 38.462 0.00 0.00 0.00 4.26
1602 1690 6.657541 AGAATTAACAACCCAGATTTCGCTAA 59.342 34.615 0.00 0.00 0.00 3.09
1603 1691 7.339466 AGAATTAACAACCCAGATTTCGCTAAT 59.661 33.333 0.00 0.00 0.00 1.73
1604 1692 8.514330 AATTAACAACCCAGATTTCGCTAATA 57.486 30.769 0.00 0.00 0.00 0.98
1605 1693 7.925043 TTAACAACCCAGATTTCGCTAATAA 57.075 32.000 0.00 0.00 0.00 1.40
1606 1694 8.514330 TTAACAACCCAGATTTCGCTAATAAT 57.486 30.769 0.00 0.00 0.00 1.28
1607 1695 7.404671 AACAACCCAGATTTCGCTAATAATT 57.595 32.000 0.00 0.00 0.00 1.40
1608 1696 7.027778 ACAACCCAGATTTCGCTAATAATTC 57.972 36.000 0.00 0.00 0.00 2.17
1609 1697 6.828785 ACAACCCAGATTTCGCTAATAATTCT 59.171 34.615 0.00 0.00 0.00 2.40
1610 1698 6.867662 ACCCAGATTTCGCTAATAATTCTG 57.132 37.500 0.00 0.00 35.55 3.02
1611 1699 6.357367 ACCCAGATTTCGCTAATAATTCTGT 58.643 36.000 0.00 0.00 34.67 3.41
1612 1700 7.506114 ACCCAGATTTCGCTAATAATTCTGTA 58.494 34.615 0.00 0.00 34.67 2.74
1613 1701 7.657761 ACCCAGATTTCGCTAATAATTCTGTAG 59.342 37.037 0.00 0.00 34.67 2.74
1614 1702 7.657761 CCCAGATTTCGCTAATAATTCTGTAGT 59.342 37.037 0.00 0.00 34.67 2.73
1615 1703 9.692749 CCAGATTTCGCTAATAATTCTGTAGTA 57.307 33.333 0.00 0.00 34.67 1.82
2281 2375 1.274167 CCACCACCGACTACTAAGCAA 59.726 52.381 0.00 0.00 0.00 3.91
2283 2377 1.274447 ACCACCGACTACTAAGCAACC 59.726 52.381 0.00 0.00 0.00 3.77
2285 2379 2.289195 CCACCGACTACTAAGCAACCAA 60.289 50.000 0.00 0.00 0.00 3.67
2296 2411 2.377310 GCAACCAAGCTTGCATGCG 61.377 57.895 27.75 15.67 45.07 4.73
2331 2458 0.930282 CGTGTGATGATCGATCGCGT 60.930 55.000 20.03 9.01 43.55 6.01
2332 2459 0.772926 GTGTGATGATCGATCGCGTC 59.227 55.000 20.03 16.96 43.55 5.19
2333 2460 0.663153 TGTGATGATCGATCGCGTCT 59.337 50.000 20.03 2.77 43.55 4.18
2334 2461 1.322865 GTGATGATCGATCGCGTCTC 58.677 55.000 20.03 14.00 38.98 3.36
2335 2462 0.110644 TGATGATCGATCGCGTCTCG 60.111 55.000 20.03 21.79 38.98 4.04
2336 2463 0.110599 GATGATCGATCGCGTCTCGT 60.111 55.000 24.85 16.23 39.67 4.18
2337 2464 0.110599 ATGATCGATCGCGTCTCGTC 60.111 55.000 24.85 21.37 39.67 4.20
2338 2465 1.275953 GATCGATCGCGTCTCGTCA 59.724 57.895 24.85 13.11 39.67 4.35
2388 2567 6.690957 TGAGTCGTTTTAGTTTGCTTTGAATG 59.309 34.615 0.00 0.00 0.00 2.67
2393 2572 7.381139 TCGTTTTAGTTTGCTTTGAATGAATCC 59.619 33.333 0.00 0.00 0.00 3.01
2394 2573 7.168972 CGTTTTAGTTTGCTTTGAATGAATCCA 59.831 33.333 0.00 0.00 0.00 3.41
2398 2577 5.246656 AGTTTGCTTTGAATGAATCCATCCA 59.753 36.000 0.00 0.00 31.40 3.41
2399 2578 5.943349 TTGCTTTGAATGAATCCATCCAT 57.057 34.783 0.00 0.00 31.40 3.41
2400 2579 5.524971 TGCTTTGAATGAATCCATCCATC 57.475 39.130 0.00 0.00 31.40 3.51
2423 2602 3.823330 GTCGATCGGTCGGCCAGT 61.823 66.667 19.53 0.00 46.35 4.00
2446 2625 1.151777 CGAGTCAGTTTGTGGTGCGT 61.152 55.000 0.00 0.00 0.00 5.24
2447 2626 1.014352 GAGTCAGTTTGTGGTGCGTT 58.986 50.000 0.00 0.00 0.00 4.84
2448 2627 1.003866 GAGTCAGTTTGTGGTGCGTTC 60.004 52.381 0.00 0.00 0.00 3.95
2449 2628 0.315869 GTCAGTTTGTGGTGCGTTCG 60.316 55.000 0.00 0.00 0.00 3.95
2490 2669 2.029470 GTGGATGATCTCGATCTGGGAC 60.029 54.545 8.25 0.00 38.60 4.46
2536 2715 0.039527 AAAACTGTGAATTCGCCCGC 60.040 50.000 16.14 0.00 0.00 6.13
2569 2748 8.122952 CGAGTAATTTCAAGTTCAGTTGAGTTT 58.877 33.333 0.00 0.04 37.72 2.66
2580 2759 1.134610 AGTTGAGTTTGAACCCGTCGT 60.135 47.619 0.00 0.00 0.00 4.34
2581 2760 1.004292 GTTGAGTTTGAACCCGTCGTG 60.004 52.381 0.00 0.00 0.00 4.35
2583 2762 1.838568 GAGTTTGAACCCGTCGTGCC 61.839 60.000 0.00 0.00 0.00 5.01
2585 2764 1.153127 TTTGAACCCGTCGTGCCTT 60.153 52.632 0.00 0.00 0.00 4.35
2587 2766 2.035237 TTGAACCCGTCGTGCCTTCT 62.035 55.000 0.00 0.00 0.00 2.85
2589 2768 1.566018 GAACCCGTCGTGCCTTCTTG 61.566 60.000 0.00 0.00 0.00 3.02
2618 2824 8.118600 AGGAACTTGAATTCTGGAATTAATCCT 58.881 33.333 7.05 12.25 43.42 3.24
2637 2843 0.388520 TGCCGTCTGTGAGATTGTCG 60.389 55.000 0.00 0.00 0.00 4.35
2698 3190 1.656652 CTCGAATCGCCATGGTTCTT 58.343 50.000 14.67 4.03 0.00 2.52
2758 3272 2.440517 AATGGAGTGGCATGCATGTA 57.559 45.000 26.79 14.30 30.90 2.29
2805 3319 0.179081 GTCGGAGTGGTGATAAGGCC 60.179 60.000 0.00 0.00 0.00 5.19
2814 3328 1.291132 GTGATAAGGCCGAGCTGTTC 58.709 55.000 0.00 0.00 0.00 3.18
2884 3399 2.324332 CTATCAGGTCGTGCTCGCGT 62.324 60.000 5.77 0.00 36.96 6.01
2921 3436 3.073086 GGTACCATACACGCATGCA 57.927 52.632 19.57 0.00 0.00 3.96
2962 3477 2.289631 CGGCCCATCTACTAATCATGCA 60.290 50.000 0.00 0.00 0.00 3.96
2963 3478 3.341823 GGCCCATCTACTAATCATGCAG 58.658 50.000 0.00 0.00 0.00 4.41
2981 3497 1.199097 CAGATTACGTGGGGTTGTTGC 59.801 52.381 0.00 0.00 0.00 4.17
2995 3511 2.319136 TGTTGCCACGTTTACTGTCT 57.681 45.000 0.00 0.00 0.00 3.41
2996 3512 2.634600 TGTTGCCACGTTTACTGTCTT 58.365 42.857 0.00 0.00 0.00 3.01
2997 3513 3.011119 TGTTGCCACGTTTACTGTCTTT 58.989 40.909 0.00 0.00 0.00 2.52
2998 3514 3.440872 TGTTGCCACGTTTACTGTCTTTT 59.559 39.130 0.00 0.00 0.00 2.27
2999 3515 4.082679 TGTTGCCACGTTTACTGTCTTTTT 60.083 37.500 0.00 0.00 0.00 1.94
3031 3547 9.480053 AAAAATTCATTCAAATCACGAATCACT 57.520 25.926 0.00 0.00 30.65 3.41
3044 3560 7.751047 TCACGAATCACTATAAAGTAGTTGC 57.249 36.000 0.00 0.00 33.48 4.17
3045 3561 6.755141 TCACGAATCACTATAAAGTAGTTGCC 59.245 38.462 0.00 0.00 33.48 4.52
3046 3562 6.018994 CACGAATCACTATAAAGTAGTTGCCC 60.019 42.308 0.00 0.00 33.48 5.36
3047 3563 5.465724 CGAATCACTATAAAGTAGTTGCCCC 59.534 44.000 0.00 0.00 33.48 5.80
3048 3564 6.576778 AATCACTATAAAGTAGTTGCCCCT 57.423 37.500 0.00 0.00 33.48 4.79
3049 3565 6.576778 ATCACTATAAAGTAGTTGCCCCTT 57.423 37.500 0.00 0.00 33.48 3.95
3050 3566 7.685849 ATCACTATAAAGTAGTTGCCCCTTA 57.314 36.000 0.00 0.00 33.48 2.69
3051 3567 6.881570 TCACTATAAAGTAGTTGCCCCTTAC 58.118 40.000 0.00 0.00 33.48 2.34
3052 3568 6.441284 TCACTATAAAGTAGTTGCCCCTTACA 59.559 38.462 0.00 0.00 33.48 2.41
3053 3569 7.038160 TCACTATAAAGTAGTTGCCCCTTACAA 60.038 37.037 0.00 0.00 33.48 2.41
3054 3570 7.280205 CACTATAAAGTAGTTGCCCCTTACAAG 59.720 40.741 0.00 0.00 33.48 3.16
3055 3571 2.491675 AGTAGTTGCCCCTTACAAGC 57.508 50.000 0.00 0.00 0.00 4.01
3056 3572 1.702957 AGTAGTTGCCCCTTACAAGCA 59.297 47.619 0.00 0.00 33.97 3.91
3057 3573 1.810755 GTAGTTGCCCCTTACAAGCAC 59.189 52.381 0.00 0.00 35.96 4.40
3058 3574 0.184933 AGTTGCCCCTTACAAGCACA 59.815 50.000 0.00 0.00 35.96 4.57
3059 3575 0.313987 GTTGCCCCTTACAAGCACAC 59.686 55.000 0.00 0.00 35.96 3.82
3060 3576 0.184933 TTGCCCCTTACAAGCACACT 59.815 50.000 0.00 0.00 35.96 3.55
3061 3577 0.537143 TGCCCCTTACAAGCACACTG 60.537 55.000 0.00 0.00 0.00 3.66
3062 3578 0.250727 GCCCCTTACAAGCACACTGA 60.251 55.000 0.00 0.00 0.00 3.41
3063 3579 1.817740 GCCCCTTACAAGCACACTGAA 60.818 52.381 0.00 0.00 0.00 3.02
3064 3580 2.582052 CCCCTTACAAGCACACTGAAA 58.418 47.619 0.00 0.00 0.00 2.69
3065 3581 2.293399 CCCCTTACAAGCACACTGAAAC 59.707 50.000 0.00 0.00 0.00 2.78
3066 3582 2.032030 CCCTTACAAGCACACTGAAACG 60.032 50.000 0.00 0.00 0.00 3.60
3067 3583 2.602217 CCTTACAAGCACACTGAAACGC 60.602 50.000 0.00 0.00 0.00 4.84
3068 3584 1.657822 TACAAGCACACTGAAACGCA 58.342 45.000 0.00 0.00 0.00 5.24
3069 3585 0.808125 ACAAGCACACTGAAACGCAA 59.192 45.000 0.00 0.00 0.00 4.85
3090 3606 3.221222 CTGTCCCAGGGATCCGAC 58.779 66.667 12.84 8.08 32.73 4.79
3091 3607 1.381872 CTGTCCCAGGGATCCGACT 60.382 63.158 12.84 2.32 32.73 4.18
3092 3608 1.680522 CTGTCCCAGGGATCCGACTG 61.681 65.000 12.84 13.18 32.73 3.51
3093 3609 1.686110 GTCCCAGGGATCCGACTGT 60.686 63.158 12.84 0.00 32.73 3.55
3094 3610 0.396695 GTCCCAGGGATCCGACTGTA 60.397 60.000 12.84 2.83 32.73 2.74
3095 3611 0.396695 TCCCAGGGATCCGACTGTAC 60.397 60.000 3.01 0.00 32.90 2.90
3096 3612 1.734137 CCAGGGATCCGACTGTACG 59.266 63.158 14.69 0.00 32.90 3.67
3097 3613 0.750546 CCAGGGATCCGACTGTACGA 60.751 60.000 14.69 0.00 32.90 3.43
3098 3614 0.663688 CAGGGATCCGACTGTACGAG 59.336 60.000 5.45 0.00 35.09 4.18
3099 3615 1.102222 AGGGATCCGACTGTACGAGC 61.102 60.000 5.45 0.00 35.09 5.03
3100 3616 1.381928 GGGATCCGACTGTACGAGCA 61.382 60.000 5.45 0.00 35.09 4.26
3101 3617 0.669077 GGATCCGACTGTACGAGCAT 59.331 55.000 0.00 0.00 35.09 3.79
3102 3618 1.878088 GGATCCGACTGTACGAGCATA 59.122 52.381 0.00 0.00 35.09 3.14
3103 3619 2.488545 GGATCCGACTGTACGAGCATAT 59.511 50.000 0.00 0.00 35.09 1.78
3104 3620 3.057456 GGATCCGACTGTACGAGCATATT 60.057 47.826 0.00 0.00 35.09 1.28
3105 3621 4.547532 GATCCGACTGTACGAGCATATTT 58.452 43.478 0.00 0.00 35.09 1.40
3106 3622 5.335426 GGATCCGACTGTACGAGCATATTTA 60.335 44.000 0.00 0.00 35.09 1.40
3107 3623 5.104562 TCCGACTGTACGAGCATATTTAG 57.895 43.478 0.00 0.00 35.09 1.85
3108 3624 4.818005 TCCGACTGTACGAGCATATTTAGA 59.182 41.667 0.00 0.00 35.09 2.10
3109 3625 5.297527 TCCGACTGTACGAGCATATTTAGAA 59.702 40.000 0.00 0.00 35.09 2.10
3110 3626 5.398711 CCGACTGTACGAGCATATTTAGAAC 59.601 44.000 0.00 0.00 35.09 3.01
3111 3627 6.200100 CGACTGTACGAGCATATTTAGAACT 58.800 40.000 0.00 0.00 35.09 3.01
3112 3628 6.357503 CGACTGTACGAGCATATTTAGAACTC 59.642 42.308 0.00 0.00 35.09 3.01
3113 3629 7.096884 ACTGTACGAGCATATTTAGAACTCA 57.903 36.000 0.00 0.00 0.00 3.41
3114 3630 7.544622 ACTGTACGAGCATATTTAGAACTCAA 58.455 34.615 0.00 0.00 0.00 3.02
3115 3631 7.702772 ACTGTACGAGCATATTTAGAACTCAAG 59.297 37.037 0.00 0.00 0.00 3.02
3116 3632 7.544622 TGTACGAGCATATTTAGAACTCAAGT 58.455 34.615 0.00 0.00 0.00 3.16
3117 3633 8.680001 TGTACGAGCATATTTAGAACTCAAGTA 58.320 33.333 0.00 0.00 0.00 2.24
3118 3634 9.171701 GTACGAGCATATTTAGAACTCAAGTAG 57.828 37.037 0.00 0.00 0.00 2.57
3119 3635 6.697892 ACGAGCATATTTAGAACTCAAGTAGC 59.302 38.462 0.00 0.00 0.00 3.58
3120 3636 6.697455 CGAGCATATTTAGAACTCAAGTAGCA 59.303 38.462 0.00 0.00 0.00 3.49
3121 3637 7.306283 CGAGCATATTTAGAACTCAAGTAGCAC 60.306 40.741 0.00 0.00 0.00 4.40
3122 3638 6.763610 AGCATATTTAGAACTCAAGTAGCACC 59.236 38.462 0.00 0.00 0.00 5.01
3123 3639 6.017852 GCATATTTAGAACTCAAGTAGCACCC 60.018 42.308 0.00 0.00 0.00 4.61
3124 3640 5.763876 ATTTAGAACTCAAGTAGCACCCT 57.236 39.130 0.00 0.00 0.00 4.34
3125 3641 6.869206 ATTTAGAACTCAAGTAGCACCCTA 57.131 37.500 0.00 0.00 0.00 3.53
3126 3642 6.675413 TTTAGAACTCAAGTAGCACCCTAA 57.325 37.500 0.00 0.00 0.00 2.69
3127 3643 6.869206 TTAGAACTCAAGTAGCACCCTAAT 57.131 37.500 0.00 0.00 0.00 1.73
3128 3644 7.966339 TTAGAACTCAAGTAGCACCCTAATA 57.034 36.000 0.00 0.00 0.00 0.98
3129 3645 6.869206 AGAACTCAAGTAGCACCCTAATAA 57.131 37.500 0.00 0.00 0.00 1.40
3130 3646 7.253905 AGAACTCAAGTAGCACCCTAATAAA 57.746 36.000 0.00 0.00 0.00 1.40
3131 3647 7.104290 AGAACTCAAGTAGCACCCTAATAAAC 58.896 38.462 0.00 0.00 0.00 2.01
3132 3648 6.368779 ACTCAAGTAGCACCCTAATAAACA 57.631 37.500 0.00 0.00 0.00 2.83
3133 3649 6.407202 ACTCAAGTAGCACCCTAATAAACAG 58.593 40.000 0.00 0.00 0.00 3.16
3134 3650 6.013639 ACTCAAGTAGCACCCTAATAAACAGT 60.014 38.462 0.00 0.00 0.00 3.55
3135 3651 6.403878 TCAAGTAGCACCCTAATAAACAGTC 58.596 40.000 0.00 0.00 0.00 3.51
3136 3652 6.212791 TCAAGTAGCACCCTAATAAACAGTCT 59.787 38.462 0.00 0.00 0.00 3.24
3137 3653 6.622427 AGTAGCACCCTAATAAACAGTCTT 57.378 37.500 0.00 0.00 0.00 3.01
3138 3654 7.729124 AGTAGCACCCTAATAAACAGTCTTA 57.271 36.000 0.00 0.00 0.00 2.10
3139 3655 8.142485 AGTAGCACCCTAATAAACAGTCTTAA 57.858 34.615 0.00 0.00 0.00 1.85
3140 3656 8.258708 AGTAGCACCCTAATAAACAGTCTTAAG 58.741 37.037 0.00 0.00 0.00 1.85
3141 3657 6.415573 AGCACCCTAATAAACAGTCTTAAGG 58.584 40.000 1.85 0.00 0.00 2.69
3142 3658 5.066117 GCACCCTAATAAACAGTCTTAAGGC 59.934 44.000 0.00 0.00 0.00 4.35
3143 3659 5.589050 CACCCTAATAAACAGTCTTAAGGCC 59.411 44.000 2.75 0.00 0.00 5.19
3144 3660 5.491439 ACCCTAATAAACAGTCTTAAGGCCT 59.509 40.000 0.00 0.00 0.00 5.19
3145 3661 6.056236 CCCTAATAAACAGTCTTAAGGCCTC 58.944 44.000 5.23 0.00 0.00 4.70
3146 3662 5.753921 CCTAATAAACAGTCTTAAGGCCTCG 59.246 44.000 5.23 0.00 0.00 4.63
3147 3663 1.809684 AAACAGTCTTAAGGCCTCGC 58.190 50.000 5.23 0.00 0.00 5.03
3148 3664 0.977395 AACAGTCTTAAGGCCTCGCT 59.023 50.000 5.23 0.00 0.00 4.93
3149 3665 0.977395 ACAGTCTTAAGGCCTCGCTT 59.023 50.000 5.23 0.00 0.00 4.68
3150 3666 1.338200 ACAGTCTTAAGGCCTCGCTTG 60.338 52.381 5.23 2.90 0.00 4.01
3151 3667 0.250513 AGTCTTAAGGCCTCGCTTGG 59.749 55.000 5.23 0.00 0.00 3.61
3152 3668 0.249398 GTCTTAAGGCCTCGCTTGGA 59.751 55.000 5.23 0.00 0.00 3.53
3153 3669 1.134371 GTCTTAAGGCCTCGCTTGGAT 60.134 52.381 5.23 0.00 0.00 3.41
3154 3670 1.559682 TCTTAAGGCCTCGCTTGGATT 59.440 47.619 5.23 0.00 0.00 3.01
3155 3671 1.672881 CTTAAGGCCTCGCTTGGATTG 59.327 52.381 5.23 0.00 0.00 2.67
3156 3672 0.748005 TAAGGCCTCGCTTGGATTGC 60.748 55.000 5.23 0.00 0.00 3.56
3157 3673 3.521796 GGCCTCGCTTGGATTGCC 61.522 66.667 0.00 0.00 35.92 4.52
3158 3674 2.751436 GCCTCGCTTGGATTGCCA 60.751 61.111 0.00 0.00 44.17 4.92
3159 3675 2.768492 GCCTCGCTTGGATTGCCAG 61.768 63.158 0.00 0.00 46.91 4.85
3160 3676 1.078214 CCTCGCTTGGATTGCCAGA 60.078 57.895 0.00 0.00 46.91 3.86
3161 3677 0.465097 CCTCGCTTGGATTGCCAGAT 60.465 55.000 0.00 0.00 46.91 2.90
3162 3678 1.386533 CTCGCTTGGATTGCCAGATT 58.613 50.000 0.00 0.00 46.91 2.40
3163 3679 1.065102 CTCGCTTGGATTGCCAGATTG 59.935 52.381 0.00 0.00 46.91 2.67
3164 3680 0.813184 CGCTTGGATTGCCAGATTGT 59.187 50.000 0.00 0.00 46.91 2.71
3165 3681 1.203052 CGCTTGGATTGCCAGATTGTT 59.797 47.619 0.00 0.00 46.91 2.83
3166 3682 2.733227 CGCTTGGATTGCCAGATTGTTC 60.733 50.000 0.00 0.00 46.91 3.18
3167 3683 2.417787 GCTTGGATTGCCAGATTGTTCC 60.418 50.000 0.00 0.00 46.91 3.62
3168 3684 2.905415 TGGATTGCCAGATTGTTCCT 57.095 45.000 0.00 0.00 39.92 3.36
3169 3685 4.272489 CTTGGATTGCCAGATTGTTCCTA 58.728 43.478 0.00 0.00 46.91 2.94
3170 3686 4.314522 TGGATTGCCAGATTGTTCCTAA 57.685 40.909 0.00 0.00 39.92 2.69
3171 3687 4.671831 TGGATTGCCAGATTGTTCCTAAA 58.328 39.130 0.00 0.00 39.92 1.85
3172 3688 5.271598 TGGATTGCCAGATTGTTCCTAAAT 58.728 37.500 0.00 0.00 39.92 1.40
3173 3689 6.430864 TGGATTGCCAGATTGTTCCTAAATA 58.569 36.000 0.00 0.00 39.92 1.40
3174 3690 6.321181 TGGATTGCCAGATTGTTCCTAAATAC 59.679 38.462 0.00 0.00 39.92 1.89
3175 3691 6.239036 GGATTGCCAGATTGTTCCTAAATACC 60.239 42.308 0.00 0.00 0.00 2.73
3176 3692 4.196193 TGCCAGATTGTTCCTAAATACCG 58.804 43.478 0.00 0.00 0.00 4.02
3177 3693 3.003378 GCCAGATTGTTCCTAAATACCGC 59.997 47.826 0.00 0.00 0.00 5.68
3178 3694 3.247648 CCAGATTGTTCCTAAATACCGCG 59.752 47.826 0.00 0.00 0.00 6.46
3179 3695 3.247648 CAGATTGTTCCTAAATACCGCGG 59.752 47.826 26.86 26.86 0.00 6.46
3180 3696 1.371595 TTGTTCCTAAATACCGCGGC 58.628 50.000 28.58 4.90 0.00 6.53
3181 3697 0.462403 TGTTCCTAAATACCGCGGCC 60.462 55.000 28.58 0.00 0.00 6.13
3182 3698 0.462403 GTTCCTAAATACCGCGGCCA 60.462 55.000 28.58 14.80 0.00 5.36
3183 3699 0.179067 TTCCTAAATACCGCGGCCAG 60.179 55.000 28.58 14.70 0.00 4.85
3184 3700 1.145377 CCTAAATACCGCGGCCAGT 59.855 57.895 28.58 10.26 0.00 4.00
3185 3701 0.390124 CCTAAATACCGCGGCCAGTA 59.610 55.000 28.58 10.87 0.00 2.74
3186 3702 1.202557 CCTAAATACCGCGGCCAGTAA 60.203 52.381 28.58 5.72 0.00 2.24
3187 3703 2.553086 CTAAATACCGCGGCCAGTAAA 58.447 47.619 28.58 3.86 0.00 2.01
3188 3704 1.823797 AAATACCGCGGCCAGTAAAA 58.176 45.000 28.58 0.31 0.00 1.52
3189 3705 2.047002 AATACCGCGGCCAGTAAAAT 57.953 45.000 28.58 4.37 0.00 1.82
3190 3706 2.914695 ATACCGCGGCCAGTAAAATA 57.085 45.000 28.58 6.96 0.00 1.40
3191 3707 1.938625 TACCGCGGCCAGTAAAATAC 58.061 50.000 28.58 0.00 0.00 1.89
3192 3708 0.036199 ACCGCGGCCAGTAAAATACA 60.036 50.000 28.58 0.00 0.00 2.29
3193 3709 0.375803 CCGCGGCCAGTAAAATACAC 59.624 55.000 14.67 0.00 0.00 2.90
3194 3710 0.375803 CGCGGCCAGTAAAATACACC 59.624 55.000 2.24 0.00 0.00 4.16
3195 3711 1.746470 GCGGCCAGTAAAATACACCT 58.254 50.000 2.24 0.00 0.00 4.00
3196 3712 1.400494 GCGGCCAGTAAAATACACCTG 59.600 52.381 2.24 0.00 0.00 4.00
3197 3713 2.706890 CGGCCAGTAAAATACACCTGT 58.293 47.619 2.24 0.00 0.00 4.00
3198 3714 3.864243 CGGCCAGTAAAATACACCTGTA 58.136 45.455 2.24 0.00 34.67 2.74
3199 3715 3.869246 CGGCCAGTAAAATACACCTGTAG 59.131 47.826 2.24 0.00 33.52 2.74
3200 3716 4.382254 CGGCCAGTAAAATACACCTGTAGA 60.382 45.833 2.24 0.00 33.52 2.59
3201 3717 5.681639 GGCCAGTAAAATACACCTGTAGAT 58.318 41.667 0.00 0.00 33.52 1.98
3202 3718 6.120220 GGCCAGTAAAATACACCTGTAGATT 58.880 40.000 0.00 0.00 33.52 2.40
3203 3719 7.277396 GGCCAGTAAAATACACCTGTAGATTA 58.723 38.462 0.00 0.00 33.52 1.75
3204 3720 7.771826 GGCCAGTAAAATACACCTGTAGATTAA 59.228 37.037 0.00 0.00 33.52 1.40
3205 3721 9.169592 GCCAGTAAAATACACCTGTAGATTAAA 57.830 33.333 0.00 0.00 33.52 1.52
3211 3727 8.446599 AAATACACCTGTAGATTAAATTCGGG 57.553 34.615 0.00 0.00 33.52 5.14
3212 3728 5.431179 ACACCTGTAGATTAAATTCGGGT 57.569 39.130 0.00 0.00 38.16 5.28
3213 3729 5.734855 CACCTGTAGATTAAATTCGGGTG 57.265 43.478 11.68 11.68 45.07 4.61
3214 3730 5.183228 CACCTGTAGATTAAATTCGGGTGT 58.817 41.667 15.17 0.00 45.21 4.16
3215 3731 6.342906 CACCTGTAGATTAAATTCGGGTGTA 58.657 40.000 15.17 0.00 45.21 2.90
3216 3732 6.990349 CACCTGTAGATTAAATTCGGGTGTAT 59.010 38.462 15.17 0.00 45.21 2.29
3217 3733 8.145767 CACCTGTAGATTAAATTCGGGTGTATA 58.854 37.037 15.17 0.00 45.21 1.47
3218 3734 8.707449 ACCTGTAGATTAAATTCGGGTGTATAA 58.293 33.333 0.00 0.00 36.56 0.98
3219 3735 9.550406 CCTGTAGATTAAATTCGGGTGTATAAA 57.450 33.333 0.00 0.00 0.00 1.40
3237 3753 7.642586 GTGTATAAATTTACACCGAATCCAAGC 59.357 37.037 11.60 0.00 43.97 4.01
3238 3754 3.757745 AATTTACACCGAATCCAAGCG 57.242 42.857 0.00 0.00 0.00 4.68
3244 3760 4.489771 CGAATCCAAGCGGGGCCT 62.490 66.667 0.84 0.00 37.22 5.19
3245 3761 2.043953 GAATCCAAGCGGGGCCTT 60.044 61.111 0.84 0.00 37.22 4.35
3246 3762 1.226262 GAATCCAAGCGGGGCCTTA 59.774 57.895 0.84 0.00 37.22 2.69
3247 3763 0.395173 GAATCCAAGCGGGGCCTTAA 60.395 55.000 0.84 0.00 37.22 1.85
3248 3764 0.395724 AATCCAAGCGGGGCCTTAAG 60.396 55.000 0.84 0.00 37.22 1.85
3249 3765 1.571773 ATCCAAGCGGGGCCTTAAGT 61.572 55.000 0.84 0.00 37.22 2.24
3250 3766 1.749258 CCAAGCGGGGCCTTAAGTC 60.749 63.158 0.84 0.00 0.00 3.01
3251 3767 1.299976 CAAGCGGGGCCTTAAGTCT 59.700 57.895 0.84 0.00 0.00 3.24
3252 3768 0.539986 CAAGCGGGGCCTTAAGTCTA 59.460 55.000 0.84 0.00 0.00 2.59
3253 3769 0.540454 AAGCGGGGCCTTAAGTCTAC 59.460 55.000 0.84 0.00 0.00 2.59
3254 3770 1.227176 GCGGGGCCTTAAGTCTACG 60.227 63.158 0.84 2.46 0.00 3.51
3255 3771 1.227176 CGGGGCCTTAAGTCTACGC 60.227 63.158 0.84 0.00 0.00 4.42
3256 3772 1.902556 GGGGCCTTAAGTCTACGCA 59.097 57.895 0.84 0.00 0.00 5.24
3257 3773 0.468648 GGGGCCTTAAGTCTACGCAT 59.531 55.000 0.84 0.00 0.00 4.73
3258 3774 1.540580 GGGGCCTTAAGTCTACGCATC 60.541 57.143 0.84 0.00 0.00 3.91
3259 3775 1.488527 GGCCTTAAGTCTACGCATCG 58.511 55.000 0.00 0.00 0.00 3.84
3260 3776 1.202382 GGCCTTAAGTCTACGCATCGT 60.202 52.381 0.00 0.00 44.35 3.73
3261 3777 2.537401 GCCTTAAGTCTACGCATCGTT 58.463 47.619 0.97 0.00 41.54 3.85
3262 3778 2.534757 GCCTTAAGTCTACGCATCGTTC 59.465 50.000 0.97 0.00 41.54 3.95
3263 3779 2.782192 CCTTAAGTCTACGCATCGTTCG 59.218 50.000 0.97 0.00 41.54 3.95
3264 3780 2.463553 TAAGTCTACGCATCGTTCGG 57.536 50.000 0.00 0.00 41.54 4.30
3265 3781 0.524862 AAGTCTACGCATCGTTCGGT 59.475 50.000 0.00 0.00 41.54 4.69
3266 3782 0.098376 AGTCTACGCATCGTTCGGTC 59.902 55.000 0.00 0.00 41.54 4.79
3267 3783 0.179181 GTCTACGCATCGTTCGGTCA 60.179 55.000 0.00 0.00 41.54 4.02
3268 3784 0.098200 TCTACGCATCGTTCGGTCAG 59.902 55.000 0.00 0.00 41.54 3.51
3269 3785 0.179171 CTACGCATCGTTCGGTCAGT 60.179 55.000 0.00 0.00 41.54 3.41
3270 3786 0.241749 TACGCATCGTTCGGTCAGTT 59.758 50.000 0.00 0.00 41.54 3.16
3271 3787 1.007336 ACGCATCGTTCGGTCAGTTC 61.007 55.000 0.00 0.00 36.35 3.01
3272 3788 0.732880 CGCATCGTTCGGTCAGTTCT 60.733 55.000 0.00 0.00 0.00 3.01
3273 3789 0.716108 GCATCGTTCGGTCAGTTCTG 59.284 55.000 0.00 0.00 0.00 3.02
3274 3790 1.668919 GCATCGTTCGGTCAGTTCTGA 60.669 52.381 0.00 0.00 0.00 3.27
3275 3791 2.881074 CATCGTTCGGTCAGTTCTGAT 58.119 47.619 5.80 0.00 0.00 2.90
3276 3792 2.347697 TCGTTCGGTCAGTTCTGATG 57.652 50.000 5.80 2.87 0.00 3.07
3277 3793 1.067846 TCGTTCGGTCAGTTCTGATGG 60.068 52.381 5.80 2.05 0.00 3.51
3278 3794 1.079503 GTTCGGTCAGTTCTGATGGC 58.920 55.000 5.80 0.00 0.00 4.40
3279 3795 0.389817 TTCGGTCAGTTCTGATGGCG 60.390 55.000 5.80 0.00 0.00 5.69
3280 3796 2.456119 CGGTCAGTTCTGATGGCGC 61.456 63.158 0.00 0.00 0.00 6.53
3281 3797 1.078848 GGTCAGTTCTGATGGCGCT 60.079 57.895 7.64 0.00 0.00 5.92
3282 3798 0.674895 GGTCAGTTCTGATGGCGCTT 60.675 55.000 7.64 0.00 0.00 4.68
3283 3799 1.405526 GGTCAGTTCTGATGGCGCTTA 60.406 52.381 7.64 0.00 0.00 3.09
3284 3800 2.555199 GTCAGTTCTGATGGCGCTTAT 58.445 47.619 7.64 1.68 0.00 1.73
3285 3801 3.492656 GGTCAGTTCTGATGGCGCTTATA 60.493 47.826 7.64 0.00 0.00 0.98
3286 3802 3.738282 GTCAGTTCTGATGGCGCTTATAG 59.262 47.826 7.64 1.37 0.00 1.31
3287 3803 3.384789 TCAGTTCTGATGGCGCTTATAGT 59.615 43.478 7.64 0.00 0.00 2.12
3288 3804 4.122776 CAGTTCTGATGGCGCTTATAGTT 58.877 43.478 7.64 0.00 0.00 2.24
3289 3805 4.572389 CAGTTCTGATGGCGCTTATAGTTT 59.428 41.667 7.64 0.00 0.00 2.66
3290 3806 5.753438 CAGTTCTGATGGCGCTTATAGTTTA 59.247 40.000 7.64 0.00 0.00 2.01
3291 3807 6.257849 CAGTTCTGATGGCGCTTATAGTTTAA 59.742 38.462 7.64 0.00 0.00 1.52
3292 3808 6.992715 AGTTCTGATGGCGCTTATAGTTTAAT 59.007 34.615 7.64 0.00 0.00 1.40
3293 3809 7.499232 AGTTCTGATGGCGCTTATAGTTTAATT 59.501 33.333 7.64 0.00 0.00 1.40
3294 3810 8.770828 GTTCTGATGGCGCTTATAGTTTAATTA 58.229 33.333 7.64 0.00 0.00 1.40
3295 3811 8.896320 TCTGATGGCGCTTATAGTTTAATTAA 57.104 30.769 7.64 0.00 0.00 1.40
3296 3812 8.988934 TCTGATGGCGCTTATAGTTTAATTAAG 58.011 33.333 7.64 0.00 0.00 1.85
3297 3813 8.896320 TGATGGCGCTTATAGTTTAATTAAGA 57.104 30.769 7.64 0.00 0.00 2.10
3298 3814 8.988934 TGATGGCGCTTATAGTTTAATTAAGAG 58.011 33.333 7.64 0.00 0.00 2.85
3299 3815 9.204570 GATGGCGCTTATAGTTTAATTAAGAGA 57.795 33.333 7.64 0.00 0.00 3.10
3300 3816 9.726438 ATGGCGCTTATAGTTTAATTAAGAGAT 57.274 29.630 7.64 0.00 0.00 2.75
3301 3817 9.555727 TGGCGCTTATAGTTTAATTAAGAGATT 57.444 29.630 7.64 0.00 0.00 2.40
3320 3836 8.845413 AGAGATTATCAAGGCATTAGATCAAC 57.155 34.615 0.00 0.00 0.00 3.18
3321 3837 8.435187 AGAGATTATCAAGGCATTAGATCAACA 58.565 33.333 0.00 0.00 0.00 3.33
3322 3838 8.985315 AGATTATCAAGGCATTAGATCAACAA 57.015 30.769 0.00 0.00 0.00 2.83
3323 3839 8.844244 AGATTATCAAGGCATTAGATCAACAAC 58.156 33.333 0.00 0.00 0.00 3.32
3324 3840 8.757982 ATTATCAAGGCATTAGATCAACAACT 57.242 30.769 0.00 0.00 0.00 3.16
3325 3841 5.885230 TCAAGGCATTAGATCAACAACTG 57.115 39.130 0.00 0.00 0.00 3.16
3326 3842 4.156556 TCAAGGCATTAGATCAACAACTGC 59.843 41.667 0.00 0.00 0.00 4.40
3327 3843 3.689347 AGGCATTAGATCAACAACTGCA 58.311 40.909 0.00 0.00 0.00 4.41
3328 3844 4.081406 AGGCATTAGATCAACAACTGCAA 58.919 39.130 0.00 0.00 0.00 4.08
3329 3845 4.708421 AGGCATTAGATCAACAACTGCAAT 59.292 37.500 0.00 0.00 0.00 3.56
3330 3846 5.039333 GGCATTAGATCAACAACTGCAATC 58.961 41.667 0.00 0.00 0.00 2.67
3331 3847 5.393352 GGCATTAGATCAACAACTGCAATCA 60.393 40.000 0.00 0.00 0.00 2.57
3332 3848 6.094719 GCATTAGATCAACAACTGCAATCAA 58.905 36.000 0.00 0.00 0.00 2.57
3333 3849 6.252869 GCATTAGATCAACAACTGCAATCAAG 59.747 38.462 0.00 0.00 0.00 3.02
3334 3850 7.532571 CATTAGATCAACAACTGCAATCAAGA 58.467 34.615 0.00 0.00 0.00 3.02
3335 3851 5.624344 AGATCAACAACTGCAATCAAGAG 57.376 39.130 0.00 0.00 0.00 2.85
3336 3852 4.458295 AGATCAACAACTGCAATCAAGAGG 59.542 41.667 0.00 0.00 0.00 3.69
3337 3853 3.819368 TCAACAACTGCAATCAAGAGGA 58.181 40.909 0.00 0.00 0.00 3.71
3338 3854 4.206375 TCAACAACTGCAATCAAGAGGAA 58.794 39.130 0.00 0.00 0.00 3.36
3339 3855 4.036734 TCAACAACTGCAATCAAGAGGAAC 59.963 41.667 0.00 0.00 0.00 3.62
3340 3856 2.549754 ACAACTGCAATCAAGAGGAACG 59.450 45.455 0.00 0.00 0.00 3.95
3341 3857 2.549754 CAACTGCAATCAAGAGGAACGT 59.450 45.455 0.00 0.00 0.00 3.99
3342 3858 2.146342 ACTGCAATCAAGAGGAACGTG 58.854 47.619 0.00 0.00 0.00 4.49
3343 3859 1.466167 CTGCAATCAAGAGGAACGTGG 59.534 52.381 0.00 0.00 0.00 4.94
3344 3860 1.071542 TGCAATCAAGAGGAACGTGGA 59.928 47.619 0.00 0.00 0.00 4.02
3345 3861 1.464997 GCAATCAAGAGGAACGTGGAC 59.535 52.381 0.00 0.00 0.00 4.02
3346 3862 1.726791 CAATCAAGAGGAACGTGGACG 59.273 52.381 0.00 0.00 46.33 4.79
3347 3863 1.254026 ATCAAGAGGAACGTGGACGA 58.746 50.000 6.12 0.00 43.02 4.20
3348 3864 1.034356 TCAAGAGGAACGTGGACGAA 58.966 50.000 6.12 0.00 43.02 3.85
3349 3865 1.000607 TCAAGAGGAACGTGGACGAAG 60.001 52.381 6.12 0.00 43.02 3.79
3350 3866 0.317479 AAGAGGAACGTGGACGAAGG 59.683 55.000 6.12 0.00 43.02 3.46
3351 3867 0.538977 AGAGGAACGTGGACGAAGGA 60.539 55.000 6.12 0.00 43.02 3.36
3352 3868 0.109226 GAGGAACGTGGACGAAGGAG 60.109 60.000 6.12 0.00 43.02 3.69
3353 3869 0.826672 AGGAACGTGGACGAAGGAGT 60.827 55.000 6.12 0.00 43.02 3.85
3354 3870 0.883833 GGAACGTGGACGAAGGAGTA 59.116 55.000 6.12 0.00 43.02 2.59
3355 3871 1.475682 GGAACGTGGACGAAGGAGTAT 59.524 52.381 6.12 0.00 43.02 2.12
3356 3872 2.094338 GGAACGTGGACGAAGGAGTATT 60.094 50.000 6.12 0.00 43.02 1.89
3357 3873 3.129287 GGAACGTGGACGAAGGAGTATTA 59.871 47.826 6.12 0.00 43.02 0.98
3358 3874 4.202090 GGAACGTGGACGAAGGAGTATTAT 60.202 45.833 6.12 0.00 43.02 1.28
3359 3875 4.996788 ACGTGGACGAAGGAGTATTATT 57.003 40.909 6.12 0.00 43.02 1.40
3360 3876 4.679662 ACGTGGACGAAGGAGTATTATTG 58.320 43.478 6.12 0.00 43.02 1.90
3361 3877 4.049186 CGTGGACGAAGGAGTATTATTGG 58.951 47.826 0.00 0.00 43.02 3.16
3362 3878 4.202080 CGTGGACGAAGGAGTATTATTGGA 60.202 45.833 0.00 0.00 43.02 3.53
3363 3879 5.290386 GTGGACGAAGGAGTATTATTGGAG 58.710 45.833 0.00 0.00 0.00 3.86
3364 3880 4.202223 TGGACGAAGGAGTATTATTGGAGC 60.202 45.833 0.00 0.00 0.00 4.70
3365 3881 4.039366 GGACGAAGGAGTATTATTGGAGCT 59.961 45.833 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.508840 CGGGATTGGCCGCTGAAC 61.509 66.667 0.00 0.00 37.63 3.18
187 188 1.816961 GCTGTGGGATGGATGATGGAC 60.817 57.143 0.00 0.00 0.00 4.02
302 303 0.389948 GCGAGGAACGATGGAACACT 60.390 55.000 0.00 0.00 45.77 3.55
314 315 0.389426 GAGGTTAACTGCGCGAGGAA 60.389 55.000 12.10 0.83 0.00 3.36
356 357 2.355756 CTCGCCATCATCGGTGATTTTT 59.644 45.455 8.88 0.00 44.40 1.94
410 411 5.116882 ACTCTAGCAAAACGAGACACTTTT 58.883 37.500 0.00 0.00 0.00 2.27
429 430 5.675684 AATGTTTGTTTGTTTGGGACTCT 57.324 34.783 0.00 0.00 0.00 3.24
430 431 6.403092 CCAAAATGTTTGTTTGTTTGGGACTC 60.403 38.462 5.72 0.00 42.89 3.36
431 432 5.414144 CCAAAATGTTTGTTTGTTTGGGACT 59.586 36.000 5.72 0.00 42.89 3.85
466 471 1.660167 CTCATGTGATCGTGCCATGT 58.340 50.000 11.71 0.00 37.73 3.21
482 487 2.535012 TGTGTTTCACATACGGCTCA 57.465 45.000 0.00 0.00 39.62 4.26
490 495 5.804979 CGGTTCTTTCTTTTGTGTTTCACAT 59.195 36.000 3.43 0.00 44.16 3.21
491 496 5.157781 CGGTTCTTTCTTTTGTGTTTCACA 58.842 37.500 0.00 0.00 43.02 3.58
493 498 4.739195 CCGGTTCTTTCTTTTGTGTTTCA 58.261 39.130 0.00 0.00 0.00 2.69
495 500 3.517602 GCCGGTTCTTTCTTTTGTGTTT 58.482 40.909 1.90 0.00 0.00 2.83
496 501 2.159156 GGCCGGTTCTTTCTTTTGTGTT 60.159 45.455 1.90 0.00 0.00 3.32
497 502 1.407618 GGCCGGTTCTTTCTTTTGTGT 59.592 47.619 1.90 0.00 0.00 3.72
504 509 0.108019 AAACTCGGCCGGTTCTTTCT 59.892 50.000 27.83 9.79 0.00 2.52
566 573 5.299279 GCTTGGTGGAATAAAATAGCTGCTA 59.701 40.000 12.40 12.40 0.00 3.49
569 576 4.646492 AGGCTTGGTGGAATAAAATAGCTG 59.354 41.667 0.00 0.00 0.00 4.24
583 590 0.815615 GGCGGAGATAAGGCTTGGTG 60.816 60.000 10.69 0.00 0.00 4.17
655 663 2.755103 AGTTTCGGAAATTGATGGGAGC 59.245 45.455 6.43 0.00 0.00 4.70
682 690 1.536766 GCATGCAGAAAGTGTGTGCTA 59.463 47.619 14.21 0.00 46.62 3.49
683 691 0.313043 GCATGCAGAAAGTGTGTGCT 59.687 50.000 14.21 0.00 46.62 4.40
684 692 0.031043 TGCATGCAGAAAGTGTGTGC 59.969 50.000 18.46 0.00 46.67 4.57
696 734 1.588824 GCTGGCTGTAACTGCATGCA 61.589 55.000 21.29 21.29 32.34 3.96
751 789 1.160137 CTTGCTACGCCTGAAGCTTT 58.840 50.000 0.00 0.00 39.53 3.51
814 856 2.509336 CAGTGACGGATGGACGGC 60.509 66.667 0.00 0.00 43.68 5.68
1145 1207 7.769272 AGAATTAATCGCTGAGAAGAAAGAG 57.231 36.000 0.00 0.00 0.00 2.85
1158 1220 7.016361 AGTGGTGATGTAAAGAATTAATCGC 57.984 36.000 0.00 0.00 0.00 4.58
1161 1223 6.823689 AGCGAGTGGTGATGTAAAGAATTAAT 59.176 34.615 0.00 0.00 0.00 1.40
1172 1234 2.125912 GCGAGCGAGTGGTGATGT 60.126 61.111 0.00 0.00 0.00 3.06
1187 1249 0.527600 TAAGCTACCACATGCGAGCG 60.528 55.000 0.00 0.00 39.96 5.03
1270 1332 0.892358 TCCCTGTCTTGTCGTACGCT 60.892 55.000 11.24 0.00 0.00 5.07
1271 1333 0.038892 TTCCCTGTCTTGTCGTACGC 60.039 55.000 11.24 6.57 0.00 4.42
1295 1359 0.179086 CCAAAACCAAAAGCAGGCGT 60.179 50.000 0.00 0.00 0.00 5.68
1370 1452 4.430441 ACCCTACTCCTTTCTGAGACAAT 58.570 43.478 0.00 0.00 36.22 2.71
1371 1453 3.858135 ACCCTACTCCTTTCTGAGACAA 58.142 45.455 0.00 0.00 36.22 3.18
1400 1482 3.726291 TTCAACCTAAAAAGCCTGCAC 57.274 42.857 0.00 0.00 0.00 4.57
1402 1484 4.519540 TCATTCAACCTAAAAAGCCTGC 57.480 40.909 0.00 0.00 0.00 4.85
1450 1532 2.150397 GGATTCTCCACGTAATCCCG 57.850 55.000 14.44 0.00 43.58 5.14
1482 1564 3.510388 TCGGAACAGAAGCTACTGATG 57.490 47.619 0.00 0.00 40.63 3.07
1484 1566 2.097629 CGATCGGAACAGAAGCTACTGA 59.902 50.000 7.38 0.00 40.63 3.41
1501 1583 1.890979 CATGGTGGCAGGCTCGATC 60.891 63.158 0.00 0.00 0.00 3.69
1522 1604 0.826715 TGTGGGCAGAAGCTAGCTAG 59.173 55.000 19.70 16.84 41.70 3.42
1523 1605 1.208052 CTTGTGGGCAGAAGCTAGCTA 59.792 52.381 19.70 0.00 41.70 3.32
1524 1606 0.035630 CTTGTGGGCAGAAGCTAGCT 60.036 55.000 12.68 12.68 41.70 3.32
1557 1640 1.068895 TGGTGCAAATGTGGCAAGAAG 59.931 47.619 0.00 0.00 43.91 2.85
1579 1667 6.827586 TTAGCGAAATCTGGGTTGTTAATT 57.172 33.333 0.00 0.00 0.00 1.40
1580 1668 8.514330 TTATTAGCGAAATCTGGGTTGTTAAT 57.486 30.769 0.00 0.00 0.00 1.40
1581 1669 7.925043 TTATTAGCGAAATCTGGGTTGTTAA 57.075 32.000 0.00 0.00 0.00 2.01
1582 1670 8.514330 AATTATTAGCGAAATCTGGGTTGTTA 57.486 30.769 0.00 0.00 0.00 2.41
1583 1671 7.339466 AGAATTATTAGCGAAATCTGGGTTGTT 59.661 33.333 0.00 0.00 0.00 2.83
1584 1672 6.828785 AGAATTATTAGCGAAATCTGGGTTGT 59.171 34.615 0.00 0.00 0.00 3.32
1585 1673 7.134815 CAGAATTATTAGCGAAATCTGGGTTG 58.865 38.462 0.00 0.00 0.00 3.77
1586 1674 6.828785 ACAGAATTATTAGCGAAATCTGGGTT 59.171 34.615 14.59 0.00 0.00 4.11
1587 1675 6.357367 ACAGAATTATTAGCGAAATCTGGGT 58.643 36.000 14.59 0.00 0.00 4.51
1588 1676 6.867662 ACAGAATTATTAGCGAAATCTGGG 57.132 37.500 14.59 0.00 0.00 4.45
1589 1677 8.594881 ACTACAGAATTATTAGCGAAATCTGG 57.405 34.615 14.59 5.56 0.00 3.86
1591 1679 9.395707 CGTACTACAGAATTATTAGCGAAATCT 57.604 33.333 0.00 0.00 0.00 2.40
1592 1680 9.178427 ACGTACTACAGAATTATTAGCGAAATC 57.822 33.333 0.00 0.00 0.00 2.17
1595 1683 9.817365 GATACGTACTACAGAATTATTAGCGAA 57.183 33.333 0.00 0.00 0.00 4.70
1596 1684 9.212641 AGATACGTACTACAGAATTATTAGCGA 57.787 33.333 0.00 0.00 0.00 4.93
1597 1685 9.263626 CAGATACGTACTACAGAATTATTAGCG 57.736 37.037 0.00 0.00 0.00 4.26
1602 1690 9.557061 TCAGTCAGATACGTACTACAGAATTAT 57.443 33.333 0.00 0.00 0.00 1.28
1603 1691 8.824781 GTCAGTCAGATACGTACTACAGAATTA 58.175 37.037 0.00 0.00 0.00 1.40
1604 1692 7.553402 AGTCAGTCAGATACGTACTACAGAATT 59.447 37.037 0.00 0.00 0.00 2.17
1605 1693 7.011576 CAGTCAGTCAGATACGTACTACAGAAT 59.988 40.741 0.00 0.00 0.00 2.40
1606 1694 6.313164 CAGTCAGTCAGATACGTACTACAGAA 59.687 42.308 0.00 0.00 0.00 3.02
1607 1695 5.811100 CAGTCAGTCAGATACGTACTACAGA 59.189 44.000 0.00 0.00 0.00 3.41
1608 1696 5.581479 ACAGTCAGTCAGATACGTACTACAG 59.419 44.000 0.00 0.00 0.00 2.74
1609 1697 5.485620 ACAGTCAGTCAGATACGTACTACA 58.514 41.667 0.00 0.00 0.00 2.74
1610 1698 6.419980 AACAGTCAGTCAGATACGTACTAC 57.580 41.667 0.00 0.00 0.00 2.73
1611 1699 7.361542 GGAAAACAGTCAGTCAGATACGTACTA 60.362 40.741 0.00 0.00 0.00 1.82
1612 1700 5.961396 AAACAGTCAGTCAGATACGTACT 57.039 39.130 0.00 0.00 0.00 2.73
1613 1701 5.572126 GGAAAACAGTCAGTCAGATACGTAC 59.428 44.000 0.00 0.00 0.00 3.67
1614 1702 5.475909 AGGAAAACAGTCAGTCAGATACGTA 59.524 40.000 0.00 0.00 0.00 3.57
1615 1703 4.281182 AGGAAAACAGTCAGTCAGATACGT 59.719 41.667 0.00 0.00 0.00 3.57
2281 2375 2.986306 GCTCGCATGCAAGCTTGGT 61.986 57.895 23.32 0.00 35.60 3.67
2283 2377 2.875485 AGCTCGCATGCAAGCTTG 59.125 55.556 27.30 22.44 46.49 4.01
2296 2411 4.933064 CGGATGGACGGCGAGCTC 62.933 72.222 16.62 2.73 0.00 4.09
2320 2447 0.110599 ATGACGAGACGCGATCGATC 60.111 55.000 33.07 26.28 44.57 3.69
2321 2448 0.110599 GATGACGAGACGCGATCGAT 60.111 55.000 33.07 21.90 44.57 3.59
2322 2449 1.275953 GATGACGAGACGCGATCGA 59.724 57.895 33.07 19.00 44.57 3.59
2323 2450 2.064258 CGATGACGAGACGCGATCG 61.064 63.158 27.73 27.73 44.57 3.69
2331 2458 1.065345 AGGAAGGAGACGATGACGAGA 60.065 52.381 0.00 0.00 42.66 4.04
2332 2459 1.384525 AGGAAGGAGACGATGACGAG 58.615 55.000 0.00 0.00 42.66 4.18
2333 2460 1.472878 CAAGGAAGGAGACGATGACGA 59.527 52.381 0.00 0.00 42.66 4.20
2334 2461 1.914634 CAAGGAAGGAGACGATGACG 58.085 55.000 0.00 0.00 45.75 4.35
2335 2462 1.646189 GCAAGGAAGGAGACGATGAC 58.354 55.000 0.00 0.00 0.00 3.06
2336 2463 0.537188 GGCAAGGAAGGAGACGATGA 59.463 55.000 0.00 0.00 0.00 2.92
2337 2464 0.250234 TGGCAAGGAAGGAGACGATG 59.750 55.000 0.00 0.00 0.00 3.84
2338 2465 1.139853 GATGGCAAGGAAGGAGACGAT 59.860 52.381 0.00 0.00 0.00 3.73
2388 2567 1.074566 GACCCAGGGATGGATGGATTC 59.925 57.143 14.54 0.00 39.02 2.52
2393 2572 0.322975 GATCGACCCAGGGATGGATG 59.677 60.000 14.54 0.00 0.00 3.51
2394 2573 1.188219 CGATCGACCCAGGGATGGAT 61.188 60.000 14.54 11.38 0.00 3.41
2398 2577 1.833049 GACCGATCGACCCAGGGAT 60.833 63.158 18.66 0.00 0.00 3.85
2399 2578 2.441532 GACCGATCGACCCAGGGA 60.442 66.667 18.66 0.00 0.00 4.20
2419 2598 3.309388 CACAAACTGACTCGACTACTGG 58.691 50.000 0.00 0.00 0.00 4.00
2421 2600 2.957006 ACCACAAACTGACTCGACTACT 59.043 45.455 0.00 0.00 0.00 2.57
2422 2601 3.050619 CACCACAAACTGACTCGACTAC 58.949 50.000 0.00 0.00 0.00 2.73
2423 2602 2.545113 GCACCACAAACTGACTCGACTA 60.545 50.000 0.00 0.00 0.00 2.59
2446 2625 0.249531 TTTACAGCTCCACGCACGAA 60.250 50.000 0.00 0.00 42.61 3.85
2447 2626 0.249531 TTTTACAGCTCCACGCACGA 60.250 50.000 0.00 0.00 42.61 4.35
2448 2627 0.163788 CTTTTACAGCTCCACGCACG 59.836 55.000 0.00 0.00 42.61 5.34
2449 2628 0.110192 GCTTTTACAGCTCCACGCAC 60.110 55.000 0.00 0.00 46.27 5.34
2490 2669 0.796312 CAAATTGACAGGGTCGGTCG 59.204 55.000 0.00 0.00 38.10 4.79
2536 2715 0.393267 TTGAAATTACTCGGGCGGGG 60.393 55.000 0.00 0.00 0.00 5.73
2569 2748 2.029964 GAAGGCACGACGGGTTCA 59.970 61.111 0.00 0.00 0.00 3.18
2574 2753 0.736325 CTACCAAGAAGGCACGACGG 60.736 60.000 0.00 0.00 43.14 4.79
2575 2754 0.736325 CCTACCAAGAAGGCACGACG 60.736 60.000 0.00 0.00 43.14 5.12
2580 2759 2.708861 TCAAGTTCCTACCAAGAAGGCA 59.291 45.455 0.00 0.00 43.14 4.75
2581 2760 3.418684 TCAAGTTCCTACCAAGAAGGC 57.581 47.619 0.00 0.00 43.14 4.35
2583 2762 6.150140 CCAGAATTCAAGTTCCTACCAAGAAG 59.850 42.308 8.44 0.00 0.00 2.85
2585 2764 5.309543 TCCAGAATTCAAGTTCCTACCAAGA 59.690 40.000 8.44 0.00 0.00 3.02
2587 2766 5.576563 TCCAGAATTCAAGTTCCTACCAA 57.423 39.130 8.44 0.00 0.00 3.67
2589 2768 8.575649 TTAATTCCAGAATTCAAGTTCCTACC 57.424 34.615 8.44 0.00 40.99 3.18
2618 2824 0.388520 CGACAATCTCACAGACGGCA 60.389 55.000 0.00 0.00 0.00 5.69
2650 2856 3.058639 CAGCCTCAGACAAACTAAACAGC 60.059 47.826 0.00 0.00 0.00 4.40
2698 3190 2.679996 TGCCTCCGCAGTGCTAGA 60.680 61.111 14.33 8.98 41.12 2.43
2728 3221 2.098117 GCCACTCCATTATTGACACTGC 59.902 50.000 0.00 0.00 0.00 4.40
2758 3272 3.320879 TACCGTCTCCCTCGTCGCT 62.321 63.158 0.00 0.00 0.00 4.93
2805 3319 1.373497 AGCCGACAAGAACAGCTCG 60.373 57.895 0.00 0.00 0.00 5.03
2962 3477 1.530323 GCAACAACCCCACGTAATCT 58.470 50.000 0.00 0.00 0.00 2.40
2963 3478 0.524414 GGCAACAACCCCACGTAATC 59.476 55.000 0.00 0.00 0.00 1.75
3005 3521 9.480053 AGTGATTCGTGATTTGAATGAATTTTT 57.520 25.926 0.00 0.00 36.24 1.94
3018 3534 8.818057 GCAACTACTTTATAGTGATTCGTGATT 58.182 33.333 0.00 0.00 35.78 2.57
3019 3535 7.438459 GGCAACTACTTTATAGTGATTCGTGAT 59.562 37.037 0.00 0.00 35.78 3.06
3020 3536 6.755141 GGCAACTACTTTATAGTGATTCGTGA 59.245 38.462 0.00 0.00 35.78 4.35
3021 3537 6.018994 GGGCAACTACTTTATAGTGATTCGTG 60.019 42.308 0.00 0.00 35.78 4.35
3022 3538 6.047231 GGGCAACTACTTTATAGTGATTCGT 58.953 40.000 0.00 0.00 35.78 3.85
3023 3539 5.465724 GGGGCAACTACTTTATAGTGATTCG 59.534 44.000 0.00 0.00 35.78 3.34
3024 3540 6.592870 AGGGGCAACTACTTTATAGTGATTC 58.407 40.000 0.00 0.00 35.78 2.52
3025 3541 6.576778 AGGGGCAACTACTTTATAGTGATT 57.423 37.500 0.00 0.00 35.78 2.57
3026 3542 6.576778 AAGGGGCAACTACTTTATAGTGAT 57.423 37.500 0.00 0.00 35.78 3.06
3027 3543 6.441284 TGTAAGGGGCAACTACTTTATAGTGA 59.559 38.462 0.00 0.00 35.78 3.41
3028 3544 6.646267 TGTAAGGGGCAACTACTTTATAGTG 58.354 40.000 0.00 0.00 35.78 2.74
3029 3545 6.879367 TGTAAGGGGCAACTACTTTATAGT 57.121 37.500 0.00 0.00 38.44 2.12
3030 3546 6.260271 GCTTGTAAGGGGCAACTACTTTATAG 59.740 42.308 0.00 0.00 35.79 1.31
3031 3547 6.117488 GCTTGTAAGGGGCAACTACTTTATA 58.883 40.000 0.00 0.00 35.79 0.98
3032 3548 4.948004 GCTTGTAAGGGGCAACTACTTTAT 59.052 41.667 0.00 0.00 35.79 1.40
3033 3549 4.202482 TGCTTGTAAGGGGCAACTACTTTA 60.202 41.667 0.00 0.00 35.79 1.85
3034 3550 3.154710 GCTTGTAAGGGGCAACTACTTT 58.845 45.455 0.00 0.00 35.79 2.66
3035 3551 2.107552 TGCTTGTAAGGGGCAACTACTT 59.892 45.455 0.00 0.00 37.48 2.24
3036 3552 1.702957 TGCTTGTAAGGGGCAACTACT 59.297 47.619 0.00 0.00 32.79 2.57
3037 3553 1.810755 GTGCTTGTAAGGGGCAACTAC 59.189 52.381 0.00 0.00 37.73 2.73
3038 3554 1.422024 TGTGCTTGTAAGGGGCAACTA 59.578 47.619 0.00 0.00 37.73 2.24
3039 3555 0.184933 TGTGCTTGTAAGGGGCAACT 59.815 50.000 0.00 0.00 37.73 3.16
3040 3556 0.313987 GTGTGCTTGTAAGGGGCAAC 59.686 55.000 0.00 0.00 37.73 4.17
3041 3557 0.184933 AGTGTGCTTGTAAGGGGCAA 59.815 50.000 0.00 0.00 37.73 4.52
3042 3558 0.537143 CAGTGTGCTTGTAAGGGGCA 60.537 55.000 0.00 0.00 0.00 5.36
3043 3559 0.250727 TCAGTGTGCTTGTAAGGGGC 60.251 55.000 0.00 0.00 0.00 5.80
3044 3560 2.270352 TTCAGTGTGCTTGTAAGGGG 57.730 50.000 0.00 0.00 0.00 4.79
3045 3561 2.032030 CGTTTCAGTGTGCTTGTAAGGG 60.032 50.000 0.00 0.00 0.00 3.95
3046 3562 2.602217 GCGTTTCAGTGTGCTTGTAAGG 60.602 50.000 0.00 0.00 0.00 2.69
3047 3563 2.031560 TGCGTTTCAGTGTGCTTGTAAG 59.968 45.455 0.00 0.00 0.00 2.34
3048 3564 2.010497 TGCGTTTCAGTGTGCTTGTAA 58.990 42.857 0.00 0.00 0.00 2.41
3049 3565 1.657822 TGCGTTTCAGTGTGCTTGTA 58.342 45.000 0.00 0.00 0.00 2.41
3050 3566 0.808125 TTGCGTTTCAGTGTGCTTGT 59.192 45.000 0.00 0.00 0.00 3.16
3051 3567 1.202177 ACTTGCGTTTCAGTGTGCTTG 60.202 47.619 0.00 0.00 0.00 4.01
3052 3568 1.064060 GACTTGCGTTTCAGTGTGCTT 59.936 47.619 0.00 0.00 0.00 3.91
3053 3569 0.657840 GACTTGCGTTTCAGTGTGCT 59.342 50.000 0.00 0.00 0.00 4.40
3054 3570 0.317020 GGACTTGCGTTTCAGTGTGC 60.317 55.000 0.00 0.00 0.00 4.57
3055 3571 1.003545 CAGGACTTGCGTTTCAGTGTG 60.004 52.381 0.00 0.00 0.00 3.82
3056 3572 1.299541 CAGGACTTGCGTTTCAGTGT 58.700 50.000 0.00 0.00 0.00 3.55
3057 3573 1.261619 GACAGGACTTGCGTTTCAGTG 59.738 52.381 0.00 0.00 0.00 3.66
3058 3574 1.583054 GACAGGACTTGCGTTTCAGT 58.417 50.000 0.00 0.00 0.00 3.41
3059 3575 0.868406 GGACAGGACTTGCGTTTCAG 59.132 55.000 0.00 0.00 0.00 3.02
3060 3576 0.534203 GGGACAGGACTTGCGTTTCA 60.534 55.000 0.00 0.00 0.00 2.69
3061 3577 0.534203 TGGGACAGGACTTGCGTTTC 60.534 55.000 0.00 0.00 0.00 2.78
3062 3578 1.529796 TGGGACAGGACTTGCGTTT 59.470 52.632 0.00 0.00 0.00 3.60
3063 3579 3.236391 TGGGACAGGACTTGCGTT 58.764 55.556 0.00 0.00 0.00 4.84
3074 3590 1.685765 CAGTCGGATCCCTGGGACA 60.686 63.158 19.82 0.00 32.98 4.02
3075 3591 0.396695 TACAGTCGGATCCCTGGGAC 60.397 60.000 19.82 11.95 32.98 4.46
3076 3592 0.396695 GTACAGTCGGATCCCTGGGA 60.397 60.000 19.69 19.69 35.55 4.37
3077 3593 1.735376 CGTACAGTCGGATCCCTGGG 61.735 65.000 18.81 6.33 32.90 4.45
3078 3594 0.750546 TCGTACAGTCGGATCCCTGG 60.751 60.000 18.81 4.75 32.90 4.45
3079 3595 0.663688 CTCGTACAGTCGGATCCCTG 59.336 60.000 14.52 14.52 34.82 4.45
3080 3596 1.102222 GCTCGTACAGTCGGATCCCT 61.102 60.000 6.06 0.00 0.00 4.20
3081 3597 1.359475 GCTCGTACAGTCGGATCCC 59.641 63.158 6.06 0.00 0.00 3.85
3082 3598 0.669077 ATGCTCGTACAGTCGGATCC 59.331 55.000 0.00 0.00 0.00 3.36
3083 3599 3.833545 ATATGCTCGTACAGTCGGATC 57.166 47.619 0.00 0.00 0.00 3.36
3084 3600 4.585955 AAATATGCTCGTACAGTCGGAT 57.414 40.909 0.00 0.00 0.00 4.18
3085 3601 4.818005 TCTAAATATGCTCGTACAGTCGGA 59.182 41.667 0.00 0.00 0.00 4.55
3086 3602 5.104562 TCTAAATATGCTCGTACAGTCGG 57.895 43.478 0.00 0.00 0.00 4.79
3087 3603 6.200100 AGTTCTAAATATGCTCGTACAGTCG 58.800 40.000 0.00 0.00 0.00 4.18
3088 3604 7.194278 TGAGTTCTAAATATGCTCGTACAGTC 58.806 38.462 0.00 0.00 0.00 3.51
3089 3605 7.096884 TGAGTTCTAAATATGCTCGTACAGT 57.903 36.000 0.00 0.00 0.00 3.55
3090 3606 7.702772 ACTTGAGTTCTAAATATGCTCGTACAG 59.297 37.037 0.00 0.00 0.00 2.74
3091 3607 7.544622 ACTTGAGTTCTAAATATGCTCGTACA 58.455 34.615 0.00 0.00 0.00 2.90
3092 3608 7.988904 ACTTGAGTTCTAAATATGCTCGTAC 57.011 36.000 0.00 0.00 0.00 3.67
3093 3609 7.861372 GCTACTTGAGTTCTAAATATGCTCGTA 59.139 37.037 0.00 0.00 0.00 3.43
3094 3610 6.697892 GCTACTTGAGTTCTAAATATGCTCGT 59.302 38.462 0.00 0.00 0.00 4.18
3095 3611 6.697455 TGCTACTTGAGTTCTAAATATGCTCG 59.303 38.462 0.00 0.00 0.00 5.03
3096 3612 7.042389 GGTGCTACTTGAGTTCTAAATATGCTC 60.042 40.741 0.00 0.00 0.00 4.26
3097 3613 6.763610 GGTGCTACTTGAGTTCTAAATATGCT 59.236 38.462 0.00 0.00 0.00 3.79
3098 3614 6.017852 GGGTGCTACTTGAGTTCTAAATATGC 60.018 42.308 0.00 0.00 0.00 3.14
3099 3615 7.275920 AGGGTGCTACTTGAGTTCTAAATATG 58.724 38.462 0.00 0.00 0.00 1.78
3100 3616 7.439108 AGGGTGCTACTTGAGTTCTAAATAT 57.561 36.000 0.00 0.00 0.00 1.28
3101 3617 6.869206 AGGGTGCTACTTGAGTTCTAAATA 57.131 37.500 0.00 0.00 0.00 1.40
3102 3618 5.763876 AGGGTGCTACTTGAGTTCTAAAT 57.236 39.130 0.00 0.00 0.00 1.40
3103 3619 6.675413 TTAGGGTGCTACTTGAGTTCTAAA 57.325 37.500 0.00 0.00 0.00 1.85
3104 3620 6.869206 ATTAGGGTGCTACTTGAGTTCTAA 57.131 37.500 0.00 0.00 0.00 2.10
3105 3621 7.966339 TTATTAGGGTGCTACTTGAGTTCTA 57.034 36.000 0.00 0.00 0.00 2.10
3106 3622 6.869206 TTATTAGGGTGCTACTTGAGTTCT 57.131 37.500 0.00 0.00 0.00 3.01
3107 3623 6.877322 TGTTTATTAGGGTGCTACTTGAGTTC 59.123 38.462 0.00 0.00 0.00 3.01
3108 3624 6.775708 TGTTTATTAGGGTGCTACTTGAGTT 58.224 36.000 0.00 0.00 0.00 3.01
3109 3625 6.013639 ACTGTTTATTAGGGTGCTACTTGAGT 60.014 38.462 0.00 0.00 0.00 3.41
3110 3626 6.407202 ACTGTTTATTAGGGTGCTACTTGAG 58.593 40.000 0.00 0.00 0.00 3.02
3111 3627 6.212791 AGACTGTTTATTAGGGTGCTACTTGA 59.787 38.462 0.00 0.00 0.00 3.02
3112 3628 6.407202 AGACTGTTTATTAGGGTGCTACTTG 58.593 40.000 0.00 0.00 0.00 3.16
3113 3629 6.622427 AGACTGTTTATTAGGGTGCTACTT 57.378 37.500 0.00 0.00 0.00 2.24
3114 3630 6.622427 AAGACTGTTTATTAGGGTGCTACT 57.378 37.500 0.00 0.00 0.00 2.57
3115 3631 7.494952 CCTTAAGACTGTTTATTAGGGTGCTAC 59.505 40.741 3.36 0.00 0.00 3.58
3116 3632 7.562135 CCTTAAGACTGTTTATTAGGGTGCTA 58.438 38.462 3.36 0.00 0.00 3.49
3117 3633 6.415573 CCTTAAGACTGTTTATTAGGGTGCT 58.584 40.000 3.36 0.00 0.00 4.40
3118 3634 5.066117 GCCTTAAGACTGTTTATTAGGGTGC 59.934 44.000 3.36 0.00 30.51 5.01
3119 3635 5.589050 GGCCTTAAGACTGTTTATTAGGGTG 59.411 44.000 3.36 0.00 30.51 4.61
3120 3636 5.491439 AGGCCTTAAGACTGTTTATTAGGGT 59.509 40.000 0.00 0.00 30.51 4.34
3121 3637 6.002653 AGGCCTTAAGACTGTTTATTAGGG 57.997 41.667 0.00 5.64 0.00 3.53
3122 3638 5.753921 CGAGGCCTTAAGACTGTTTATTAGG 59.246 44.000 6.77 0.00 0.00 2.69
3123 3639 5.234543 GCGAGGCCTTAAGACTGTTTATTAG 59.765 44.000 6.77 0.00 0.00 1.73
3124 3640 5.105064 AGCGAGGCCTTAAGACTGTTTATTA 60.105 40.000 6.77 0.00 0.00 0.98
3125 3641 3.939592 GCGAGGCCTTAAGACTGTTTATT 59.060 43.478 6.77 0.00 0.00 1.40
3126 3642 3.197983 AGCGAGGCCTTAAGACTGTTTAT 59.802 43.478 6.77 0.00 0.00 1.40
3127 3643 2.565834 AGCGAGGCCTTAAGACTGTTTA 59.434 45.455 6.77 0.00 0.00 2.01
3128 3644 1.348036 AGCGAGGCCTTAAGACTGTTT 59.652 47.619 6.77 0.00 0.00 2.83
3129 3645 0.977395 AGCGAGGCCTTAAGACTGTT 59.023 50.000 6.77 0.00 0.00 3.16
3130 3646 0.977395 AAGCGAGGCCTTAAGACTGT 59.023 50.000 6.77 0.00 0.00 3.55
3131 3647 1.363744 CAAGCGAGGCCTTAAGACTG 58.636 55.000 6.77 0.00 0.00 3.51
3132 3648 0.250513 CCAAGCGAGGCCTTAAGACT 59.749 55.000 6.77 1.41 0.00 3.24
3133 3649 0.249398 TCCAAGCGAGGCCTTAAGAC 59.751 55.000 6.77 0.00 0.00 3.01
3134 3650 1.204146 ATCCAAGCGAGGCCTTAAGA 58.796 50.000 6.77 0.00 0.00 2.10
3135 3651 1.672881 CAATCCAAGCGAGGCCTTAAG 59.327 52.381 6.77 2.61 0.00 1.85
3136 3652 1.750193 CAATCCAAGCGAGGCCTTAA 58.250 50.000 6.77 0.00 0.00 1.85
3137 3653 0.748005 GCAATCCAAGCGAGGCCTTA 60.748 55.000 6.77 0.00 0.00 2.69
3138 3654 2.048603 GCAATCCAAGCGAGGCCTT 61.049 57.895 6.77 0.00 0.00 4.35
3139 3655 2.439156 GCAATCCAAGCGAGGCCT 60.439 61.111 3.86 3.86 0.00 5.19
3140 3656 3.521796 GGCAATCCAAGCGAGGCC 61.522 66.667 0.00 0.00 37.62 5.19
3141 3657 2.751436 TGGCAATCCAAGCGAGGC 60.751 61.111 0.00 0.00 39.99 4.70
3142 3658 0.465097 ATCTGGCAATCCAAGCGAGG 60.465 55.000 0.00 0.00 42.91 4.63
3143 3659 1.065102 CAATCTGGCAATCCAAGCGAG 59.935 52.381 0.00 0.00 42.91 5.03
3144 3660 1.097232 CAATCTGGCAATCCAAGCGA 58.903 50.000 0.00 0.00 42.91 4.93
3145 3661 0.813184 ACAATCTGGCAATCCAAGCG 59.187 50.000 0.00 0.00 42.91 4.68
3146 3662 2.417787 GGAACAATCTGGCAATCCAAGC 60.418 50.000 0.00 0.00 42.91 4.01
3147 3663 3.094572 AGGAACAATCTGGCAATCCAAG 58.905 45.455 0.00 0.00 42.91 3.61
3148 3664 3.173953 AGGAACAATCTGGCAATCCAA 57.826 42.857 0.00 0.00 42.91 3.53
3149 3665 2.905415 AGGAACAATCTGGCAATCCA 57.095 45.000 0.00 0.00 40.85 3.41
3150 3666 5.859205 ATTTAGGAACAATCTGGCAATCC 57.141 39.130 0.00 0.00 0.00 3.01
3151 3667 6.513393 CGGTATTTAGGAACAATCTGGCAATC 60.513 42.308 0.00 0.00 0.00 2.67
3152 3668 5.299279 CGGTATTTAGGAACAATCTGGCAAT 59.701 40.000 0.00 0.00 0.00 3.56
3153 3669 4.638421 CGGTATTTAGGAACAATCTGGCAA 59.362 41.667 0.00 0.00 0.00 4.52
3154 3670 4.196193 CGGTATTTAGGAACAATCTGGCA 58.804 43.478 0.00 0.00 0.00 4.92
3155 3671 3.003378 GCGGTATTTAGGAACAATCTGGC 59.997 47.826 0.00 0.00 0.00 4.85
3156 3672 3.247648 CGCGGTATTTAGGAACAATCTGG 59.752 47.826 0.00 0.00 0.00 3.86
3157 3673 3.247648 CCGCGGTATTTAGGAACAATCTG 59.752 47.826 19.50 0.00 0.00 2.90
3158 3674 3.463944 CCGCGGTATTTAGGAACAATCT 58.536 45.455 19.50 0.00 0.00 2.40
3159 3675 2.032290 GCCGCGGTATTTAGGAACAATC 60.032 50.000 28.70 0.00 0.00 2.67
3160 3676 1.944709 GCCGCGGTATTTAGGAACAAT 59.055 47.619 28.70 0.00 0.00 2.71
3161 3677 1.371595 GCCGCGGTATTTAGGAACAA 58.628 50.000 28.70 0.00 0.00 2.83
3162 3678 0.462403 GGCCGCGGTATTTAGGAACA 60.462 55.000 28.70 0.00 0.00 3.18
3163 3679 0.462403 TGGCCGCGGTATTTAGGAAC 60.462 55.000 28.70 5.15 0.00 3.62
3164 3680 0.179067 CTGGCCGCGGTATTTAGGAA 60.179 55.000 28.70 0.98 0.00 3.36
3165 3681 1.332144 ACTGGCCGCGGTATTTAGGA 61.332 55.000 28.70 0.74 0.00 2.94
3166 3682 0.390124 TACTGGCCGCGGTATTTAGG 59.610 55.000 28.70 12.28 0.00 2.69
3167 3683 2.228138 TTACTGGCCGCGGTATTTAG 57.772 50.000 28.70 18.85 0.00 1.85
3168 3684 2.687700 TTTACTGGCCGCGGTATTTA 57.312 45.000 28.70 10.73 0.00 1.40
3169 3685 1.823797 TTTTACTGGCCGCGGTATTT 58.176 45.000 28.70 11.81 0.00 1.40
3170 3686 2.047002 ATTTTACTGGCCGCGGTATT 57.953 45.000 28.70 12.97 0.00 1.89
3171 3687 2.158928 TGTATTTTACTGGCCGCGGTAT 60.159 45.455 28.70 12.30 0.00 2.73
3172 3688 1.206610 TGTATTTTACTGGCCGCGGTA 59.793 47.619 28.70 15.56 0.00 4.02
3173 3689 0.036199 TGTATTTTACTGGCCGCGGT 60.036 50.000 28.70 9.45 0.00 5.68
3174 3690 0.375803 GTGTATTTTACTGGCCGCGG 59.624 55.000 24.05 24.05 0.00 6.46
3175 3691 0.375803 GGTGTATTTTACTGGCCGCG 59.624 55.000 0.00 0.00 0.00 6.46
3176 3692 1.400494 CAGGTGTATTTTACTGGCCGC 59.600 52.381 0.00 0.00 0.00 6.53
3177 3693 2.706890 ACAGGTGTATTTTACTGGCCG 58.293 47.619 0.00 0.00 35.34 6.13
3178 3694 5.093849 TCTACAGGTGTATTTTACTGGCC 57.906 43.478 0.00 0.00 35.34 5.36
3179 3695 8.726870 TTAATCTACAGGTGTATTTTACTGGC 57.273 34.615 0.00 0.00 35.34 4.85
3185 3701 8.899771 CCCGAATTTAATCTACAGGTGTATTTT 58.100 33.333 0.00 0.00 0.00 1.82
3186 3702 8.050930 ACCCGAATTTAATCTACAGGTGTATTT 58.949 33.333 0.00 0.00 0.00 1.40
3187 3703 7.497909 CACCCGAATTTAATCTACAGGTGTATT 59.502 37.037 0.00 0.00 37.93 1.89
3188 3704 6.990349 CACCCGAATTTAATCTACAGGTGTAT 59.010 38.462 0.00 0.00 37.93 2.29
3189 3705 6.342906 CACCCGAATTTAATCTACAGGTGTA 58.657 40.000 0.00 0.00 37.93 2.90
3190 3706 5.183228 CACCCGAATTTAATCTACAGGTGT 58.817 41.667 0.00 0.00 37.93 4.16
3191 3707 5.183228 ACACCCGAATTTAATCTACAGGTG 58.817 41.667 0.00 0.00 46.06 4.00
3192 3708 5.431179 ACACCCGAATTTAATCTACAGGT 57.569 39.130 0.00 0.00 0.00 4.00
3193 3709 9.550406 TTTATACACCCGAATTTAATCTACAGG 57.450 33.333 0.00 0.00 0.00 4.00
3212 3728 7.466185 CGCTTGGATTCGGTGTAAATTTATACA 60.466 37.037 21.94 8.29 33.52 2.29
3213 3729 6.849305 CGCTTGGATTCGGTGTAAATTTATAC 59.151 38.462 14.77 14.77 0.00 1.47
3214 3730 6.017770 CCGCTTGGATTCGGTGTAAATTTATA 60.018 38.462 0.31 0.00 40.72 0.98
3215 3731 5.220970 CCGCTTGGATTCGGTGTAAATTTAT 60.221 40.000 0.31 0.00 40.72 1.40
3216 3732 4.095185 CCGCTTGGATTCGGTGTAAATTTA 59.905 41.667 0.00 0.00 40.72 1.40
3217 3733 3.119637 CCGCTTGGATTCGGTGTAAATTT 60.120 43.478 0.00 0.00 40.72 1.82
3218 3734 2.422127 CCGCTTGGATTCGGTGTAAATT 59.578 45.455 0.00 0.00 40.72 1.82
3219 3735 2.014128 CCGCTTGGATTCGGTGTAAAT 58.986 47.619 0.00 0.00 40.72 1.40
3220 3736 1.444836 CCGCTTGGATTCGGTGTAAA 58.555 50.000 0.00 0.00 40.72 2.01
3221 3737 0.391927 CCCGCTTGGATTCGGTGTAA 60.392 55.000 0.00 0.00 43.87 2.41
3222 3738 1.219664 CCCGCTTGGATTCGGTGTA 59.780 57.895 0.00 0.00 43.87 2.90
3223 3739 2.046314 CCCGCTTGGATTCGGTGT 60.046 61.111 0.00 0.00 43.87 4.16
3224 3740 2.824041 CCCCGCTTGGATTCGGTG 60.824 66.667 0.00 0.00 43.87 4.94
3225 3741 4.796495 GCCCCGCTTGGATTCGGT 62.796 66.667 0.00 0.00 43.87 4.69
3227 3743 2.602746 TAAGGCCCCGCTTGGATTCG 62.603 60.000 0.00 0.00 35.39 3.34
3228 3744 0.395173 TTAAGGCCCCGCTTGGATTC 60.395 55.000 0.00 0.00 35.39 2.52
3229 3745 0.395724 CTTAAGGCCCCGCTTGGATT 60.396 55.000 0.00 0.00 35.39 3.01
3230 3746 1.227383 CTTAAGGCCCCGCTTGGAT 59.773 57.895 0.00 0.00 35.39 3.41
3231 3747 2.193087 GACTTAAGGCCCCGCTTGGA 62.193 60.000 7.53 0.00 35.39 3.53
3232 3748 1.749258 GACTTAAGGCCCCGCTTGG 60.749 63.158 7.53 0.00 0.00 3.61
3233 3749 0.539986 TAGACTTAAGGCCCCGCTTG 59.460 55.000 4.17 0.00 0.00 4.01
3234 3750 0.540454 GTAGACTTAAGGCCCCGCTT 59.460 55.000 4.17 0.00 0.00 4.68
3235 3751 1.673808 CGTAGACTTAAGGCCCCGCT 61.674 60.000 4.17 0.00 0.00 5.52
3236 3752 1.227176 CGTAGACTTAAGGCCCCGC 60.227 63.158 4.17 0.00 0.00 6.13
3237 3753 1.227176 GCGTAGACTTAAGGCCCCG 60.227 63.158 4.17 8.79 0.00 5.73
3238 3754 0.468648 ATGCGTAGACTTAAGGCCCC 59.531 55.000 4.17 0.00 0.00 5.80
3239 3755 1.867166 GATGCGTAGACTTAAGGCCC 58.133 55.000 4.17 0.00 0.00 5.80
3240 3756 1.202382 ACGATGCGTAGACTTAAGGCC 60.202 52.381 4.17 0.00 38.73 5.19
3241 3757 2.205307 ACGATGCGTAGACTTAAGGC 57.795 50.000 7.53 3.14 38.73 4.35
3242 3758 2.782192 CGAACGATGCGTAGACTTAAGG 59.218 50.000 7.53 0.00 39.99 2.69
3243 3759 2.782192 CCGAACGATGCGTAGACTTAAG 59.218 50.000 0.00 0.00 39.99 1.85
3244 3760 2.162208 ACCGAACGATGCGTAGACTTAA 59.838 45.455 0.00 0.00 39.99 1.85
3245 3761 1.739466 ACCGAACGATGCGTAGACTTA 59.261 47.619 0.00 0.00 39.99 2.24
3246 3762 0.524862 ACCGAACGATGCGTAGACTT 59.475 50.000 0.00 0.00 39.99 3.01
3247 3763 0.098376 GACCGAACGATGCGTAGACT 59.902 55.000 0.00 0.00 39.99 3.24
3248 3764 0.179181 TGACCGAACGATGCGTAGAC 60.179 55.000 0.00 0.00 39.99 2.59
3249 3765 0.098200 CTGACCGAACGATGCGTAGA 59.902 55.000 0.00 0.00 39.99 2.59
3250 3766 0.179171 ACTGACCGAACGATGCGTAG 60.179 55.000 0.00 0.00 39.99 3.51
3251 3767 0.241749 AACTGACCGAACGATGCGTA 59.758 50.000 0.00 0.00 39.99 4.42
3252 3768 1.006571 AACTGACCGAACGATGCGT 60.007 52.632 0.00 0.00 43.97 5.24
3253 3769 0.732880 AGAACTGACCGAACGATGCG 60.733 55.000 0.00 0.00 0.00 4.73
3254 3770 0.716108 CAGAACTGACCGAACGATGC 59.284 55.000 0.00 0.00 0.00 3.91
3255 3771 2.347697 TCAGAACTGACCGAACGATG 57.652 50.000 0.00 0.00 34.14 3.84
3256 3772 2.417379 CCATCAGAACTGACCGAACGAT 60.417 50.000 6.67 0.00 43.11 3.73
3257 3773 1.067846 CCATCAGAACTGACCGAACGA 60.068 52.381 6.67 0.00 43.11 3.85
3258 3774 1.350193 CCATCAGAACTGACCGAACG 58.650 55.000 6.67 0.00 43.11 3.95
3259 3775 1.079503 GCCATCAGAACTGACCGAAC 58.920 55.000 6.67 0.00 43.11 3.95
3260 3776 0.389817 CGCCATCAGAACTGACCGAA 60.390 55.000 6.67 0.00 43.11 4.30
3261 3777 1.215382 CGCCATCAGAACTGACCGA 59.785 57.895 6.67 0.00 43.11 4.69
3262 3778 2.456119 GCGCCATCAGAACTGACCG 61.456 63.158 6.67 10.69 43.11 4.79
3263 3779 0.674895 AAGCGCCATCAGAACTGACC 60.675 55.000 2.29 0.00 43.11 4.02
3264 3780 2.010145 TAAGCGCCATCAGAACTGAC 57.990 50.000 2.29 0.00 43.11 3.51
3265 3781 2.988010 ATAAGCGCCATCAGAACTGA 57.012 45.000 2.29 6.98 44.59 3.41
3266 3782 3.722147 ACTATAAGCGCCATCAGAACTG 58.278 45.455 2.29 0.00 0.00 3.16
3267 3783 4.408182 AACTATAAGCGCCATCAGAACT 57.592 40.909 2.29 0.00 0.00 3.01
3268 3784 6.598753 TTAAACTATAAGCGCCATCAGAAC 57.401 37.500 2.29 0.00 0.00 3.01
3269 3785 7.801716 AATTAAACTATAAGCGCCATCAGAA 57.198 32.000 2.29 0.00 0.00 3.02
3270 3786 8.896320 TTAATTAAACTATAAGCGCCATCAGA 57.104 30.769 2.29 0.00 0.00 3.27
3271 3787 8.988934 TCTTAATTAAACTATAAGCGCCATCAG 58.011 33.333 2.29 0.00 0.00 2.90
3272 3788 8.896320 TCTTAATTAAACTATAAGCGCCATCA 57.104 30.769 2.29 0.00 0.00 3.07
3273 3789 9.204570 TCTCTTAATTAAACTATAAGCGCCATC 57.795 33.333 2.29 0.00 0.00 3.51
3274 3790 9.726438 ATCTCTTAATTAAACTATAAGCGCCAT 57.274 29.630 2.29 0.00 0.00 4.40
3275 3791 9.555727 AATCTCTTAATTAAACTATAAGCGCCA 57.444 29.630 2.29 0.00 0.00 5.69
3294 3810 9.282569 GTTGATCTAATGCCTTGATAATCTCTT 57.717 33.333 0.00 0.00 0.00 2.85
3295 3811 8.435187 TGTTGATCTAATGCCTTGATAATCTCT 58.565 33.333 0.00 0.00 0.00 3.10
3296 3812 8.613060 TGTTGATCTAATGCCTTGATAATCTC 57.387 34.615 0.00 0.00 0.00 2.75
3297 3813 8.844244 GTTGTTGATCTAATGCCTTGATAATCT 58.156 33.333 0.00 0.00 0.00 2.40
3298 3814 8.844244 AGTTGTTGATCTAATGCCTTGATAATC 58.156 33.333 0.00 0.00 0.00 1.75
3299 3815 8.627403 CAGTTGTTGATCTAATGCCTTGATAAT 58.373 33.333 0.00 0.00 0.00 1.28
3300 3816 7.415541 GCAGTTGTTGATCTAATGCCTTGATAA 60.416 37.037 0.00 0.00 37.03 1.75
3301 3817 6.038603 GCAGTTGTTGATCTAATGCCTTGATA 59.961 38.462 0.00 0.00 37.03 2.15
3302 3818 5.163581 GCAGTTGTTGATCTAATGCCTTGAT 60.164 40.000 0.00 0.00 37.03 2.57
3303 3819 4.156556 GCAGTTGTTGATCTAATGCCTTGA 59.843 41.667 0.00 0.00 37.03 3.02
3304 3820 4.082625 TGCAGTTGTTGATCTAATGCCTTG 60.083 41.667 0.00 0.00 40.74 3.61
3305 3821 4.081406 TGCAGTTGTTGATCTAATGCCTT 58.919 39.130 0.00 0.00 40.74 4.35
3306 3822 3.689347 TGCAGTTGTTGATCTAATGCCT 58.311 40.909 0.00 0.00 40.74 4.75
3307 3823 4.439305 TTGCAGTTGTTGATCTAATGCC 57.561 40.909 0.00 0.00 40.74 4.40
3308 3824 5.643664 TGATTGCAGTTGTTGATCTAATGC 58.356 37.500 0.00 0.00 41.50 3.56
3309 3825 7.532571 TCTTGATTGCAGTTGTTGATCTAATG 58.467 34.615 0.00 0.00 0.00 1.90
3310 3826 7.148120 CCTCTTGATTGCAGTTGTTGATCTAAT 60.148 37.037 0.00 0.00 0.00 1.73
3311 3827 6.149973 CCTCTTGATTGCAGTTGTTGATCTAA 59.850 38.462 0.00 0.00 0.00 2.10
3312 3828 5.645067 CCTCTTGATTGCAGTTGTTGATCTA 59.355 40.000 0.00 0.00 0.00 1.98
3313 3829 4.458295 CCTCTTGATTGCAGTTGTTGATCT 59.542 41.667 0.00 0.00 0.00 2.75
3314 3830 4.456911 TCCTCTTGATTGCAGTTGTTGATC 59.543 41.667 0.00 0.00 0.00 2.92
3315 3831 4.401022 TCCTCTTGATTGCAGTTGTTGAT 58.599 39.130 0.00 0.00 0.00 2.57
3316 3832 3.819368 TCCTCTTGATTGCAGTTGTTGA 58.181 40.909 0.00 0.00 0.00 3.18
3317 3833 4.293415 GTTCCTCTTGATTGCAGTTGTTG 58.707 43.478 0.00 0.00 0.00 3.33
3318 3834 3.003689 CGTTCCTCTTGATTGCAGTTGTT 59.996 43.478 0.00 0.00 0.00 2.83
3319 3835 2.549754 CGTTCCTCTTGATTGCAGTTGT 59.450 45.455 0.00 0.00 0.00 3.32
3320 3836 2.549754 ACGTTCCTCTTGATTGCAGTTG 59.450 45.455 0.00 0.00 0.00 3.16
3321 3837 2.549754 CACGTTCCTCTTGATTGCAGTT 59.450 45.455 0.00 0.00 0.00 3.16
3322 3838 2.146342 CACGTTCCTCTTGATTGCAGT 58.854 47.619 0.00 0.00 0.00 4.40
3323 3839 1.466167 CCACGTTCCTCTTGATTGCAG 59.534 52.381 0.00 0.00 0.00 4.41
3324 3840 1.071542 TCCACGTTCCTCTTGATTGCA 59.928 47.619 0.00 0.00 0.00 4.08
3325 3841 1.464997 GTCCACGTTCCTCTTGATTGC 59.535 52.381 0.00 0.00 0.00 3.56
3326 3842 1.726791 CGTCCACGTTCCTCTTGATTG 59.273 52.381 0.00 0.00 34.11 2.67
3327 3843 1.616865 TCGTCCACGTTCCTCTTGATT 59.383 47.619 0.00 0.00 40.80 2.57
3328 3844 1.254026 TCGTCCACGTTCCTCTTGAT 58.746 50.000 0.00 0.00 40.80 2.57
3329 3845 1.000607 CTTCGTCCACGTTCCTCTTGA 60.001 52.381 0.00 0.00 40.80 3.02
3330 3846 1.419374 CTTCGTCCACGTTCCTCTTG 58.581 55.000 0.00 0.00 40.80 3.02
3331 3847 0.317479 CCTTCGTCCACGTTCCTCTT 59.683 55.000 0.00 0.00 40.80 2.85
3332 3848 0.538977 TCCTTCGTCCACGTTCCTCT 60.539 55.000 0.00 0.00 40.80 3.69
3333 3849 0.109226 CTCCTTCGTCCACGTTCCTC 60.109 60.000 0.00 0.00 40.80 3.71
3334 3850 0.826672 ACTCCTTCGTCCACGTTCCT 60.827 55.000 0.00 0.00 40.80 3.36
3335 3851 0.883833 TACTCCTTCGTCCACGTTCC 59.116 55.000 0.00 0.00 40.80 3.62
3336 3852 2.935481 ATACTCCTTCGTCCACGTTC 57.065 50.000 0.00 0.00 40.80 3.95
3337 3853 4.996788 ATAATACTCCTTCGTCCACGTT 57.003 40.909 0.00 0.00 40.80 3.99
3338 3854 4.441079 CCAATAATACTCCTTCGTCCACGT 60.441 45.833 0.00 0.00 40.80 4.49
3339 3855 4.049186 CCAATAATACTCCTTCGTCCACG 58.951 47.826 0.00 0.00 41.45 4.94
3340 3856 5.272283 TCCAATAATACTCCTTCGTCCAC 57.728 43.478 0.00 0.00 0.00 4.02
3341 3857 4.202223 GCTCCAATAATACTCCTTCGTCCA 60.202 45.833 0.00 0.00 0.00 4.02
3342 3858 4.039366 AGCTCCAATAATACTCCTTCGTCC 59.961 45.833 0.00 0.00 0.00 4.79
3343 3859 5.203060 AGCTCCAATAATACTCCTTCGTC 57.797 43.478 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.