Multiple sequence alignment - TraesCS4D01G261600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G261600 chr4D 100.000 3217 0 0 1 3217 432750803 432747587 0.000000e+00 5941.0
1 TraesCS4D01G261600 chr4A 89.552 2412 169 39 140 2501 34028823 34026445 0.000000e+00 2981.0
2 TraesCS4D01G261600 chr4A 94.488 127 6 1 1 127 34029518 34029393 9.110000e-46 195.0
3 TraesCS4D01G261600 chr4A 89.655 145 13 2 2983 3125 34026440 34026296 1.970000e-42 183.0
4 TraesCS4D01G261600 chr4A 88.350 103 5 2 3120 3215 34026122 34026020 2.030000e-22 117.0
5 TraesCS4D01G261600 chr4A 94.595 37 2 0 1589 1625 660654570 660654606 1.250000e-04 58.4
6 TraesCS4D01G261600 chr4B 89.428 1712 76 55 698 2333 530519360 530521042 0.000000e+00 2061.0
7 TraesCS4D01G261600 chr3B 86.268 568 62 10 135 691 11085755 11086317 1.280000e-168 603.0
8 TraesCS4D01G261600 chr3B 83.019 530 79 7 126 650 762735439 762735962 1.350000e-128 470.0
9 TraesCS4D01G261600 chr1A 84.303 567 80 6 126 690 369493525 369492966 2.180000e-151 545.0
10 TraesCS4D01G261600 chr1A 84.177 474 64 6 2516 2981 22348977 22348507 1.760000e-122 449.0
11 TraesCS4D01G261600 chr2B 84.740 557 60 15 135 674 136433407 136432859 4.720000e-148 534.0
12 TraesCS4D01G261600 chr2B 84.867 489 62 6 2506 2986 654433961 654434445 1.740000e-132 483.0
13 TraesCS4D01G261600 chr2D 84.686 542 72 6 126 661 590938802 590939338 6.110000e-147 531.0
14 TraesCS4D01G261600 chr1D 84.934 531 61 7 135 660 491744791 491744275 1.320000e-143 520.0
15 TraesCS4D01G261600 chr5A 85.801 493 58 9 2502 2986 11886380 11886868 2.210000e-141 512.0
16 TraesCS4D01G261600 chr2A 84.363 518 69 9 144 657 765556035 765555526 6.200000e-137 497.0
17 TraesCS4D01G261600 chr2A 82.265 468 73 7 2512 2972 720333861 720333397 2.330000e-106 396.0
18 TraesCS4D01G261600 chr3D 83.619 525 70 8 131 650 573266439 573266952 2.240000e-131 479.0
19 TraesCS4D01G261600 chr3D 83.036 448 66 5 2516 2955 340001996 340002441 6.470000e-107 398.0
20 TraesCS4D01G261600 chr7D 84.536 485 59 8 2511 2986 7338578 7339055 1.750000e-127 466.0
21 TraesCS4D01G261600 chr7D 84.615 416 56 4 2508 2916 519788147 519787733 1.070000e-109 407.0
22 TraesCS4D01G261600 chr7D 90.698 43 4 0 1589 1631 46586081 46586039 1.250000e-04 58.4
23 TraesCS4D01G261600 chr7D 87.755 49 6 0 1590 1638 46670499 46670451 1.250000e-04 58.4
24 TraesCS4D01G261600 chr5D 84.472 483 61 9 2512 2986 63255348 63255824 6.290000e-127 464.0
25 TraesCS4D01G261600 chr7A 86.052 423 49 5 2556 2972 121558752 121559170 2.280000e-121 446.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G261600 chr4D 432747587 432750803 3216 True 5941 5941 100.00000 1 3217 1 chr4D.!!$R1 3216
1 TraesCS4D01G261600 chr4A 34026020 34029518 3498 True 869 2981 90.51125 1 3215 4 chr4A.!!$R1 3214
2 TraesCS4D01G261600 chr4B 530519360 530521042 1682 False 2061 2061 89.42800 698 2333 1 chr4B.!!$F1 1635
3 TraesCS4D01G261600 chr3B 11085755 11086317 562 False 603 603 86.26800 135 691 1 chr3B.!!$F1 556
4 TraesCS4D01G261600 chr3B 762735439 762735962 523 False 470 470 83.01900 126 650 1 chr3B.!!$F2 524
5 TraesCS4D01G261600 chr1A 369492966 369493525 559 True 545 545 84.30300 126 690 1 chr1A.!!$R2 564
6 TraesCS4D01G261600 chr2B 136432859 136433407 548 True 534 534 84.74000 135 674 1 chr2B.!!$R1 539
7 TraesCS4D01G261600 chr2D 590938802 590939338 536 False 531 531 84.68600 126 661 1 chr2D.!!$F1 535
8 TraesCS4D01G261600 chr1D 491744275 491744791 516 True 520 520 84.93400 135 660 1 chr1D.!!$R1 525
9 TraesCS4D01G261600 chr2A 765555526 765556035 509 True 497 497 84.36300 144 657 1 chr2A.!!$R2 513
10 TraesCS4D01G261600 chr3D 573266439 573266952 513 False 479 479 83.61900 131 650 1 chr3D.!!$F2 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
132 133 0.177604 GGGAGATCAGCACCAGTCAG 59.822 60.0 0.0 0.0 0.00 3.51 F
170 728 0.321564 CCTCATCACCGAGGCAAACA 60.322 55.0 0.0 0.0 45.95 2.83 F
220 778 0.869880 TCTCGCATAATGTCGCCACG 60.870 55.0 0.0 0.0 0.00 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2116 2808 0.750911 ATCGTACACCCCTCCGACTC 60.751 60.0 0.0 0.0 31.43 3.36 R
2118 2810 1.033746 TGATCGTACACCCCTCCGAC 61.034 60.0 0.0 0.0 31.43 4.79 R
2287 3003 1.035139 GCATCCACCCATTGATGACC 58.965 55.0 3.8 0.0 40.64 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
94 95 1.574428 CTTGTCGCCAAAAGACGGG 59.426 57.895 0.00 0.00 41.24 5.28
96 97 0.464013 TTGTCGCCAAAAGACGGGAA 60.464 50.000 0.00 0.00 41.24 3.97
103 104 2.432444 CCAAAAGACGGGAATGTGCTA 58.568 47.619 0.00 0.00 0.00 3.49
106 107 4.638421 CCAAAAGACGGGAATGTGCTATTA 59.362 41.667 0.00 0.00 0.00 0.98
127 128 0.326904 ATCTGGGGAGATCAGCACCA 60.327 55.000 9.00 9.00 32.63 4.17
129 130 1.229625 TGGGGAGATCAGCACCAGT 60.230 57.895 5.54 0.00 0.00 4.00
130 131 1.267574 TGGGGAGATCAGCACCAGTC 61.268 60.000 5.54 0.00 0.00 3.51
131 132 1.267574 GGGGAGATCAGCACCAGTCA 61.268 60.000 2.26 0.00 0.00 3.41
132 133 0.177604 GGGAGATCAGCACCAGTCAG 59.822 60.000 0.00 0.00 0.00 3.51
133 134 1.189752 GGAGATCAGCACCAGTCAGA 58.810 55.000 0.00 0.00 0.00 3.27
170 728 0.321564 CCTCATCACCGAGGCAAACA 60.322 55.000 0.00 0.00 45.95 2.83
184 742 2.497173 AAACAAGCACGCCATGGCA 61.497 52.632 34.93 0.00 42.06 4.92
220 778 0.869880 TCTCGCATAATGTCGCCACG 60.870 55.000 0.00 0.00 0.00 4.94
350 910 3.560481 GTCGACCTGAGACGATGAAGATA 59.440 47.826 3.51 0.00 41.91 1.98
413 977 2.435437 GGAGGACGAGGAGTAGTCTAGT 59.565 54.545 0.00 0.00 37.52 2.57
457 1021 4.303086 AGCATCATATGAACTTGCTTGC 57.697 40.909 21.33 17.96 40.58 4.01
568 1158 1.654023 GCTGGATTTTACCGCGCCTT 61.654 55.000 0.00 0.00 0.00 4.35
581 1171 1.495951 CGCCTTGTGAAACGCTACC 59.504 57.895 0.00 0.00 42.39 3.18
614 1204 8.227731 GCTAAATTTTGTAGCGTCTGAAAAAT 57.772 30.769 0.00 0.00 35.03 1.82
696 1292 2.813754 GTTGGAGATGCTTTACAGTGCA 59.186 45.455 0.00 0.00 43.67 4.57
709 1305 6.403636 GCTTTACAGTGCATAGTAAGCATGTT 60.404 38.462 15.52 0.00 44.79 2.71
748 1347 1.005512 TCGCTTTTACGCTGCTCCA 60.006 52.632 0.00 0.00 0.00 3.86
781 1380 5.565509 TCCATTATCCAAAACTAGCACACA 58.434 37.500 0.00 0.00 0.00 3.72
810 1434 2.095415 TGATCGATCACTATTACCGGCG 60.095 50.000 23.99 0.00 0.00 6.46
956 1587 3.535962 CTCTCCTCAGCCCTCGCC 61.536 72.222 0.00 0.00 34.57 5.54
1033 1664 1.802960 CACTGGACAACACAGCATCTC 59.197 52.381 0.00 0.00 39.55 2.75
1316 1978 2.725008 GCGCTAGGTGCTCGAGAT 59.275 61.111 18.75 0.54 40.11 2.75
1317 1979 1.371145 GCGCTAGGTGCTCGAGATC 60.371 63.158 18.75 7.70 40.11 2.75
1318 1980 1.791103 GCGCTAGGTGCTCGAGATCT 61.791 60.000 18.75 11.85 40.11 2.75
1319 1981 1.514003 CGCTAGGTGCTCGAGATCTA 58.486 55.000 18.75 12.36 40.11 1.98
1320 1982 1.874231 CGCTAGGTGCTCGAGATCTAA 59.126 52.381 18.75 0.00 40.11 2.10
1321 1983 2.290916 CGCTAGGTGCTCGAGATCTAAA 59.709 50.000 18.75 0.00 40.11 1.85
1322 1984 3.057876 CGCTAGGTGCTCGAGATCTAAAT 60.058 47.826 18.75 0.00 40.11 1.40
1323 1985 4.557695 CGCTAGGTGCTCGAGATCTAAATT 60.558 45.833 18.75 0.00 40.11 1.82
1352 2014 3.228934 AACCGCAATGTGCTGTTGCTT 62.229 47.619 8.90 5.36 46.41 3.91
1790 2467 1.003116 GCTGCAGTTCACACTTCACAG 60.003 52.381 16.64 0.00 32.48 3.66
1803 2480 6.936335 TCACACTTCACAGACATAAATGACAT 59.064 34.615 0.00 0.00 0.00 3.06
2282 2998 6.755607 GCAGTAGTAGTATTGGTGGTAGTTTC 59.244 42.308 2.63 0.00 0.00 2.78
2283 2999 7.578189 GCAGTAGTAGTATTGGTGGTAGTTTCA 60.578 40.741 2.63 0.00 0.00 2.69
2284 3000 8.308931 CAGTAGTAGTATTGGTGGTAGTTTCAA 58.691 37.037 0.00 0.00 0.00 2.69
2285 3001 9.043548 AGTAGTAGTATTGGTGGTAGTTTCAAT 57.956 33.333 0.00 0.00 34.65 2.57
2286 3002 9.095065 GTAGTAGTATTGGTGGTAGTTTCAATG 57.905 37.037 0.00 0.00 32.81 2.82
2287 3003 7.110155 AGTAGTATTGGTGGTAGTTTCAATGG 58.890 38.462 0.00 0.00 32.81 3.16
2288 3004 5.261216 AGTATTGGTGGTAGTTTCAATGGG 58.739 41.667 0.00 0.00 32.81 4.00
2289 3005 3.603965 TTGGTGGTAGTTTCAATGGGT 57.396 42.857 0.00 0.00 0.00 4.51
2290 3006 3.149005 TGGTGGTAGTTTCAATGGGTC 57.851 47.619 0.00 0.00 0.00 4.46
2291 3007 2.443632 TGGTGGTAGTTTCAATGGGTCA 59.556 45.455 0.00 0.00 0.00 4.02
2292 3008 3.075283 TGGTGGTAGTTTCAATGGGTCAT 59.925 43.478 0.00 0.00 0.00 3.06
2333 3049 7.879160 CCTAACGGAGAATCTCAGTAGTAGTAT 59.121 40.741 15.88 2.19 37.88 2.12
2334 3050 9.275398 CTAACGGAGAATCTCAGTAGTAGTATT 57.725 37.037 15.88 1.52 37.88 1.89
2336 3052 7.932335 ACGGAGAATCTCAGTAGTAGTATTTG 58.068 38.462 14.13 0.00 37.16 2.32
2342 3058 9.187455 GAATCTCAGTAGTAGTATTTGCTAAGC 57.813 37.037 0.00 0.00 0.00 3.09
2343 3059 7.883391 TCTCAGTAGTAGTATTTGCTAAGCT 57.117 36.000 0.00 0.00 0.00 3.74
2422 3143 4.068599 TCATGCAAGTGGTTTATCGTGAA 58.931 39.130 0.00 0.00 0.00 3.18
2433 3154 5.924254 TGGTTTATCGTGAACTGAACTAGTG 59.076 40.000 0.00 0.00 40.26 2.74
2445 3169 6.859112 ACTGAACTAGTGATGTCTAATGGT 57.141 37.500 0.00 0.00 38.49 3.55
2456 3180 4.890158 TGTCTAATGGTGTGATCACAGT 57.110 40.909 28.54 14.74 45.45 3.55
2473 3197 2.143122 CAGTTCACAAGGCGTATGTGT 58.857 47.619 16.70 0.28 46.42 3.72
2487 3212 4.506654 GCGTATGTGTAGTCCCATTTGTAG 59.493 45.833 0.00 0.00 0.00 2.74
2544 3269 3.106736 AGGAAGACCCTCGGCCTA 58.893 61.111 0.00 0.00 43.31 3.93
2545 3270 1.627019 AGGAAGACCCTCGGCCTAT 59.373 57.895 0.00 0.00 43.31 2.57
2546 3271 0.760945 AGGAAGACCCTCGGCCTATG 60.761 60.000 0.00 0.00 43.31 2.23
2547 3272 1.069935 GAAGACCCTCGGCCTATGC 59.930 63.158 0.00 0.00 0.00 3.14
2548 3273 1.686325 GAAGACCCTCGGCCTATGCA 61.686 60.000 0.00 0.00 40.13 3.96
2549 3274 1.972660 AAGACCCTCGGCCTATGCAC 61.973 60.000 0.00 0.00 40.13 4.57
2550 3275 3.462199 GACCCTCGGCCTATGCACC 62.462 68.421 0.00 0.00 40.13 5.01
2551 3276 3.164269 CCCTCGGCCTATGCACCT 61.164 66.667 0.00 0.00 40.13 4.00
2552 3277 2.109799 CCTCGGCCTATGCACCTG 59.890 66.667 0.00 0.00 40.13 4.00
2553 3278 2.109799 CTCGGCCTATGCACCTGG 59.890 66.667 0.00 0.00 40.13 4.45
2554 3279 3.466791 CTCGGCCTATGCACCTGGG 62.467 68.421 0.00 0.00 40.13 4.45
2557 3282 4.175337 GCCTATGCACCTGGGCGA 62.175 66.667 0.00 0.00 37.47 5.54
2558 3283 2.831770 CCTATGCACCTGGGCGAT 59.168 61.111 0.00 0.00 36.28 4.58
2559 3284 1.302033 CCTATGCACCTGGGCGATC 60.302 63.158 0.00 0.00 36.28 3.69
2560 3285 1.302033 CTATGCACCTGGGCGATCC 60.302 63.158 0.00 0.00 36.28 3.36
2561 3286 2.043604 CTATGCACCTGGGCGATCCA 62.044 60.000 0.00 0.00 44.79 3.41
2562 3287 1.418097 TATGCACCTGGGCGATCCAT 61.418 55.000 0.00 0.00 46.01 3.41
2563 3288 2.903855 GCACCTGGGCGATCCATG 60.904 66.667 0.00 0.00 46.01 3.66
2564 3289 2.903855 CACCTGGGCGATCCATGC 60.904 66.667 0.00 0.00 46.01 4.06
2565 3290 3.410628 ACCTGGGCGATCCATGCA 61.411 61.111 0.00 0.00 46.01 3.96
2566 3291 2.593725 CCTGGGCGATCCATGCAG 60.594 66.667 0.00 0.00 46.01 4.41
2567 3292 3.285215 CTGGGCGATCCATGCAGC 61.285 66.667 0.00 0.00 46.01 5.25
2571 3296 3.440151 GCGATCCATGCAGCCATT 58.560 55.556 0.00 0.00 0.00 3.16
2572 3297 1.737816 GCGATCCATGCAGCCATTT 59.262 52.632 0.00 0.00 0.00 2.32
2573 3298 0.103572 GCGATCCATGCAGCCATTTT 59.896 50.000 0.00 0.00 0.00 1.82
2574 3299 1.337703 GCGATCCATGCAGCCATTTTA 59.662 47.619 0.00 0.00 0.00 1.52
2575 3300 2.029649 GCGATCCATGCAGCCATTTTAT 60.030 45.455 0.00 0.00 0.00 1.40
2576 3301 3.553508 GCGATCCATGCAGCCATTTTATT 60.554 43.478 0.00 0.00 0.00 1.40
2577 3302 4.321156 GCGATCCATGCAGCCATTTTATTA 60.321 41.667 0.00 0.00 0.00 0.98
2578 3303 5.771469 CGATCCATGCAGCCATTTTATTAA 58.229 37.500 0.00 0.00 0.00 1.40
2579 3304 6.392354 CGATCCATGCAGCCATTTTATTAAT 58.608 36.000 0.00 0.00 0.00 1.40
2580 3305 6.869913 CGATCCATGCAGCCATTTTATTAATT 59.130 34.615 0.00 0.00 0.00 1.40
2581 3306 8.028354 CGATCCATGCAGCCATTTTATTAATTA 58.972 33.333 0.00 0.00 0.00 1.40
2582 3307 9.880157 GATCCATGCAGCCATTTTATTAATTAT 57.120 29.630 0.00 0.00 0.00 1.28
2584 3309 9.709495 TCCATGCAGCCATTTTATTAATTATTC 57.291 29.630 0.00 0.00 0.00 1.75
2585 3310 9.491675 CCATGCAGCCATTTTATTAATTATTCA 57.508 29.630 0.00 0.00 0.00 2.57
2612 3337 8.782533 AAAAGACTTTACAAAGAAATACAGCG 57.217 30.769 8.65 0.00 39.31 5.18
2613 3338 6.481954 AGACTTTACAAAGAAATACAGCGG 57.518 37.500 8.65 0.00 39.31 5.52
2614 3339 5.995897 AGACTTTACAAAGAAATACAGCGGT 59.004 36.000 8.65 0.00 39.31 5.68
2615 3340 7.156673 AGACTTTACAAAGAAATACAGCGGTA 58.843 34.615 8.65 0.00 39.31 4.02
2616 3341 7.658575 AGACTTTACAAAGAAATACAGCGGTAA 59.341 33.333 8.65 0.00 39.31 2.85
2617 3342 7.803724 ACTTTACAAAGAAATACAGCGGTAAG 58.196 34.615 8.65 0.00 39.31 2.34
2618 3343 7.443272 ACTTTACAAAGAAATACAGCGGTAAGT 59.557 33.333 8.65 0.00 39.31 2.24
2619 3344 5.857822 ACAAAGAAATACAGCGGTAAGTC 57.142 39.130 0.00 1.75 32.19 3.01
2620 3345 5.548406 ACAAAGAAATACAGCGGTAAGTCT 58.452 37.500 0.00 4.08 32.19 3.24
2621 3346 5.408604 ACAAAGAAATACAGCGGTAAGTCTG 59.591 40.000 11.67 6.05 36.45 3.51
2622 3347 5.401531 AAGAAATACAGCGGTAAGTCTGA 57.598 39.130 11.67 0.00 34.57 3.27
2623 3348 5.401531 AGAAATACAGCGGTAAGTCTGAA 57.598 39.130 10.59 0.00 34.57 3.02
2624 3349 5.790593 AGAAATACAGCGGTAAGTCTGAAA 58.209 37.500 10.59 0.00 34.57 2.69
2625 3350 6.407202 AGAAATACAGCGGTAAGTCTGAAAT 58.593 36.000 10.59 0.00 34.57 2.17
2626 3351 6.535508 AGAAATACAGCGGTAAGTCTGAAATC 59.464 38.462 10.59 0.00 34.57 2.17
2627 3352 3.678056 ACAGCGGTAAGTCTGAAATCA 57.322 42.857 0.00 0.00 34.57 2.57
2628 3353 3.326747 ACAGCGGTAAGTCTGAAATCAC 58.673 45.455 0.00 0.00 34.57 3.06
2629 3354 2.673368 CAGCGGTAAGTCTGAAATCACC 59.327 50.000 0.00 0.00 32.26 4.02
2631 3356 2.955614 CGGTAAGTCTGAAATCACCGT 58.044 47.619 11.16 0.00 42.93 4.83
2632 3357 2.921754 CGGTAAGTCTGAAATCACCGTC 59.078 50.000 11.16 0.00 42.93 4.79
2633 3358 3.367087 CGGTAAGTCTGAAATCACCGTCT 60.367 47.826 11.16 0.00 42.93 4.18
2634 3359 4.142534 CGGTAAGTCTGAAATCACCGTCTA 60.143 45.833 11.16 0.00 42.93 2.59
2635 3360 5.341617 GGTAAGTCTGAAATCACCGTCTAG 58.658 45.833 0.00 0.00 0.00 2.43
2636 3361 8.806741 CGGTAAGTCTGAAATCACCGTCTAGG 62.807 50.000 11.16 0.00 42.93 3.02
2637 3362 2.166664 AGTCTGAAATCACCGTCTAGGC 59.833 50.000 0.00 0.00 46.52 3.93
2638 3363 2.094182 GTCTGAAATCACCGTCTAGGCA 60.094 50.000 0.00 0.00 46.52 4.75
2639 3364 2.565391 TCTGAAATCACCGTCTAGGCAA 59.435 45.455 0.00 0.00 46.52 4.52
2640 3365 2.673368 CTGAAATCACCGTCTAGGCAAC 59.327 50.000 0.00 0.00 46.52 4.17
2641 3366 2.037902 TGAAATCACCGTCTAGGCAACA 59.962 45.455 0.00 0.00 46.52 3.33
2642 3367 3.270877 GAAATCACCGTCTAGGCAACAT 58.729 45.455 0.00 0.00 46.52 2.71
2643 3368 2.604046 ATCACCGTCTAGGCAACATC 57.396 50.000 0.00 0.00 46.52 3.06
2644 3369 1.557099 TCACCGTCTAGGCAACATCT 58.443 50.000 0.00 0.00 46.52 2.90
2645 3370 1.204704 TCACCGTCTAGGCAACATCTG 59.795 52.381 0.00 0.00 46.52 2.90
2646 3371 1.066858 CACCGTCTAGGCAACATCTGT 60.067 52.381 0.00 0.00 46.52 3.41
2647 3372 1.204941 ACCGTCTAGGCAACATCTGTC 59.795 52.381 0.00 0.00 46.52 3.51
2648 3373 1.550065 CGTCTAGGCAACATCTGTCG 58.450 55.000 0.00 0.00 41.41 4.35
2649 3374 1.281899 GTCTAGGCAACATCTGTCGC 58.718 55.000 0.00 0.00 41.41 5.19
2650 3375 1.134965 GTCTAGGCAACATCTGTCGCT 60.135 52.381 0.00 0.00 41.41 4.93
2651 3376 2.099263 GTCTAGGCAACATCTGTCGCTA 59.901 50.000 0.00 0.00 41.41 4.26
2652 3377 2.099263 TCTAGGCAACATCTGTCGCTAC 59.901 50.000 0.00 0.00 41.41 3.58
2653 3378 0.898320 AGGCAACATCTGTCGCTACT 59.102 50.000 0.00 0.00 41.41 2.57
2654 3379 1.134965 AGGCAACATCTGTCGCTACTC 60.135 52.381 0.00 0.00 41.41 2.59
2655 3380 1.281899 GCAACATCTGTCGCTACTCC 58.718 55.000 0.00 0.00 0.00 3.85
2656 3381 1.134965 GCAACATCTGTCGCTACTCCT 60.135 52.381 0.00 0.00 0.00 3.69
2657 3382 2.099263 GCAACATCTGTCGCTACTCCTA 59.901 50.000 0.00 0.00 0.00 2.94
2658 3383 3.243569 GCAACATCTGTCGCTACTCCTAT 60.244 47.826 0.00 0.00 0.00 2.57
2659 3384 4.541779 CAACATCTGTCGCTACTCCTATC 58.458 47.826 0.00 0.00 0.00 2.08
2660 3385 3.150767 ACATCTGTCGCTACTCCTATCC 58.849 50.000 0.00 0.00 0.00 2.59
2661 3386 3.181438 ACATCTGTCGCTACTCCTATCCT 60.181 47.826 0.00 0.00 0.00 3.24
2662 3387 2.852449 TCTGTCGCTACTCCTATCCTG 58.148 52.381 0.00 0.00 0.00 3.86
2663 3388 2.172930 TCTGTCGCTACTCCTATCCTGT 59.827 50.000 0.00 0.00 0.00 4.00
2664 3389 2.952978 CTGTCGCTACTCCTATCCTGTT 59.047 50.000 0.00 0.00 0.00 3.16
2665 3390 2.688446 TGTCGCTACTCCTATCCTGTTG 59.312 50.000 0.00 0.00 0.00 3.33
2666 3391 2.950309 GTCGCTACTCCTATCCTGTTGA 59.050 50.000 0.00 0.00 0.00 3.18
2667 3392 3.570550 GTCGCTACTCCTATCCTGTTGAT 59.429 47.826 0.00 0.00 37.49 2.57
2668 3393 3.570125 TCGCTACTCCTATCCTGTTGATG 59.430 47.826 0.00 0.00 34.76 3.07
2669 3394 3.570125 CGCTACTCCTATCCTGTTGATGA 59.430 47.826 0.00 0.00 34.76 2.92
2670 3395 4.038042 CGCTACTCCTATCCTGTTGATGAA 59.962 45.833 0.00 0.00 34.76 2.57
2671 3396 5.537188 GCTACTCCTATCCTGTTGATGAAG 58.463 45.833 0.00 0.00 34.76 3.02
2672 3397 5.510520 GCTACTCCTATCCTGTTGATGAAGG 60.511 48.000 0.00 0.00 34.76 3.46
2673 3398 3.713764 ACTCCTATCCTGTTGATGAAGGG 59.286 47.826 0.00 0.00 32.19 3.95
2674 3399 3.969976 CTCCTATCCTGTTGATGAAGGGA 59.030 47.826 0.00 0.00 32.19 4.20
2675 3400 4.570926 TCCTATCCTGTTGATGAAGGGAT 58.429 43.478 5.09 5.09 39.68 3.85
2676 3401 4.349048 TCCTATCCTGTTGATGAAGGGATG 59.651 45.833 8.79 1.86 37.37 3.51
2677 3402 2.425143 TCCTGTTGATGAAGGGATGC 57.575 50.000 0.00 0.00 34.08 3.91
2678 3403 1.918262 TCCTGTTGATGAAGGGATGCT 59.082 47.619 0.00 0.00 34.08 3.79
2679 3404 2.022195 CCTGTTGATGAAGGGATGCTG 58.978 52.381 0.00 0.00 0.00 4.41
2680 3405 2.356432 CCTGTTGATGAAGGGATGCTGA 60.356 50.000 0.00 0.00 0.00 4.26
2681 3406 3.552875 CTGTTGATGAAGGGATGCTGAT 58.447 45.455 0.00 0.00 0.00 2.90
2682 3407 4.445305 CCTGTTGATGAAGGGATGCTGATA 60.445 45.833 0.00 0.00 0.00 2.15
2683 3408 4.711399 TGTTGATGAAGGGATGCTGATAG 58.289 43.478 0.00 0.00 0.00 2.08
2684 3409 4.164796 TGTTGATGAAGGGATGCTGATAGT 59.835 41.667 0.00 0.00 0.00 2.12
2685 3410 4.613925 TGATGAAGGGATGCTGATAGTC 57.386 45.455 0.00 0.00 0.00 2.59
2686 3411 4.229639 TGATGAAGGGATGCTGATAGTCT 58.770 43.478 0.00 0.00 0.00 3.24
2687 3412 4.040095 TGATGAAGGGATGCTGATAGTCTG 59.960 45.833 0.00 0.00 0.00 3.51
2688 3413 3.646534 TGAAGGGATGCTGATAGTCTGA 58.353 45.455 0.00 0.00 0.00 3.27
2689 3414 3.640498 TGAAGGGATGCTGATAGTCTGAG 59.360 47.826 0.00 0.00 0.00 3.35
2690 3415 1.969923 AGGGATGCTGATAGTCTGAGC 59.030 52.381 0.00 0.00 0.00 4.26
2691 3416 1.001860 GGGATGCTGATAGTCTGAGCC 59.998 57.143 0.00 0.00 31.31 4.70
2692 3417 1.969923 GGATGCTGATAGTCTGAGCCT 59.030 52.381 0.00 0.00 31.31 4.58
2693 3418 3.161067 GGATGCTGATAGTCTGAGCCTA 58.839 50.000 0.00 0.00 31.31 3.93
2694 3419 3.576118 GGATGCTGATAGTCTGAGCCTAA 59.424 47.826 0.00 0.00 31.31 2.69
2695 3420 4.222588 GGATGCTGATAGTCTGAGCCTAAT 59.777 45.833 0.00 0.00 31.31 1.73
2696 3421 5.420421 GGATGCTGATAGTCTGAGCCTAATA 59.580 44.000 0.00 0.00 31.31 0.98
2697 3422 5.713792 TGCTGATAGTCTGAGCCTAATAC 57.286 43.478 0.00 0.00 31.31 1.89
2698 3423 4.524714 TGCTGATAGTCTGAGCCTAATACC 59.475 45.833 0.00 0.00 31.31 2.73
2699 3424 4.524714 GCTGATAGTCTGAGCCTAATACCA 59.475 45.833 0.00 0.00 0.00 3.25
2700 3425 5.011125 GCTGATAGTCTGAGCCTAATACCAA 59.989 44.000 0.00 0.00 0.00 3.67
2701 3426 6.463049 GCTGATAGTCTGAGCCTAATACCAAA 60.463 42.308 0.00 0.00 0.00 3.28
2702 3427 6.817184 TGATAGTCTGAGCCTAATACCAAAC 58.183 40.000 0.00 0.00 0.00 2.93
2703 3428 6.382859 TGATAGTCTGAGCCTAATACCAAACA 59.617 38.462 0.00 0.00 0.00 2.83
2704 3429 5.091261 AGTCTGAGCCTAATACCAAACAG 57.909 43.478 0.00 0.00 0.00 3.16
2705 3430 4.777896 AGTCTGAGCCTAATACCAAACAGA 59.222 41.667 0.00 0.00 0.00 3.41
2706 3431 4.870991 GTCTGAGCCTAATACCAAACAGAC 59.129 45.833 0.00 0.00 43.32 3.51
2707 3432 4.081087 TCTGAGCCTAATACCAAACAGACC 60.081 45.833 0.00 0.00 0.00 3.85
2708 3433 3.844211 TGAGCCTAATACCAAACAGACCT 59.156 43.478 0.00 0.00 0.00 3.85
2709 3434 4.081087 TGAGCCTAATACCAAACAGACCTC 60.081 45.833 0.00 0.00 0.00 3.85
2710 3435 3.118738 AGCCTAATACCAAACAGACCTCG 60.119 47.826 0.00 0.00 0.00 4.63
2711 3436 3.195661 CCTAATACCAAACAGACCTCGC 58.804 50.000 0.00 0.00 0.00 5.03
2712 3437 2.851263 AATACCAAACAGACCTCGCA 57.149 45.000 0.00 0.00 0.00 5.10
2713 3438 2.386661 ATACCAAACAGACCTCGCAG 57.613 50.000 0.00 0.00 0.00 5.18
2714 3439 0.320421 TACCAAACAGACCTCGCAGC 60.320 55.000 0.00 0.00 0.00 5.25
2715 3440 2.328099 CCAAACAGACCTCGCAGCC 61.328 63.158 0.00 0.00 0.00 4.85
2716 3441 1.597854 CAAACAGACCTCGCAGCCA 60.598 57.895 0.00 0.00 0.00 4.75
2717 3442 1.148273 AAACAGACCTCGCAGCCAA 59.852 52.632 0.00 0.00 0.00 4.52
2718 3443 0.886490 AAACAGACCTCGCAGCCAAG 60.886 55.000 0.00 0.00 0.00 3.61
2719 3444 2.044806 AACAGACCTCGCAGCCAAGT 62.045 55.000 0.00 0.00 0.00 3.16
2720 3445 1.739562 CAGACCTCGCAGCCAAGTC 60.740 63.158 0.00 0.00 0.00 3.01
2721 3446 1.910772 AGACCTCGCAGCCAAGTCT 60.911 57.895 0.96 0.96 33.04 3.24
2722 3447 0.612174 AGACCTCGCAGCCAAGTCTA 60.612 55.000 4.44 0.00 36.08 2.59
2723 3448 0.246635 GACCTCGCAGCCAAGTCTAA 59.753 55.000 0.00 0.00 0.00 2.10
2724 3449 0.037232 ACCTCGCAGCCAAGTCTAAC 60.037 55.000 0.00 0.00 0.00 2.34
2725 3450 0.037326 CCTCGCAGCCAAGTCTAACA 60.037 55.000 0.00 0.00 0.00 2.41
2726 3451 1.406069 CCTCGCAGCCAAGTCTAACAT 60.406 52.381 0.00 0.00 0.00 2.71
2727 3452 2.350522 CTCGCAGCCAAGTCTAACATT 58.649 47.619 0.00 0.00 0.00 2.71
2728 3453 2.744202 CTCGCAGCCAAGTCTAACATTT 59.256 45.455 0.00 0.00 0.00 2.32
2729 3454 2.742053 TCGCAGCCAAGTCTAACATTTC 59.258 45.455 0.00 0.00 0.00 2.17
2730 3455 2.483877 CGCAGCCAAGTCTAACATTTCA 59.516 45.455 0.00 0.00 0.00 2.69
2731 3456 3.425359 CGCAGCCAAGTCTAACATTTCAG 60.425 47.826 0.00 0.00 0.00 3.02
2732 3457 3.753272 GCAGCCAAGTCTAACATTTCAGA 59.247 43.478 0.00 0.00 0.00 3.27
2733 3458 4.378874 GCAGCCAAGTCTAACATTTCAGAC 60.379 45.833 0.00 0.00 41.25 3.51
2734 3459 4.154918 CAGCCAAGTCTAACATTTCAGACC 59.845 45.833 0.00 0.00 41.77 3.85
2735 3460 4.042187 AGCCAAGTCTAACATTTCAGACCT 59.958 41.667 0.00 0.00 41.77 3.85
2736 3461 4.154918 GCCAAGTCTAACATTTCAGACCTG 59.845 45.833 0.00 0.00 41.77 4.00
2737 3462 5.551233 CCAAGTCTAACATTTCAGACCTGA 58.449 41.667 0.00 0.00 41.77 3.86
2738 3463 5.641209 CCAAGTCTAACATTTCAGACCTGAG 59.359 44.000 0.00 0.00 41.77 3.35
2739 3464 5.413309 AGTCTAACATTTCAGACCTGAGG 57.587 43.478 0.00 0.00 41.77 3.86
2740 3465 3.935828 GTCTAACATTTCAGACCTGAGGC 59.064 47.826 0.00 0.00 41.13 4.70
2741 3466 2.206576 AACATTTCAGACCTGAGGCC 57.793 50.000 0.00 0.00 41.13 5.19
2742 3467 0.329596 ACATTTCAGACCTGAGGCCC 59.670 55.000 0.00 0.00 41.13 5.80
2743 3468 0.394899 CATTTCAGACCTGAGGCCCC 60.395 60.000 0.00 0.00 41.13 5.80
2744 3469 0.846427 ATTTCAGACCTGAGGCCCCA 60.846 55.000 0.00 0.00 41.13 4.96
2745 3470 1.065410 TTTCAGACCTGAGGCCCCAA 61.065 55.000 0.00 0.00 41.13 4.12
2746 3471 1.779061 TTCAGACCTGAGGCCCCAAC 61.779 60.000 0.00 0.00 41.13 3.77
2747 3472 2.208349 AGACCTGAGGCCCCAACT 59.792 61.111 0.00 0.00 0.00 3.16
2748 3473 0.909610 CAGACCTGAGGCCCCAACTA 60.910 60.000 0.00 0.00 0.00 2.24
2749 3474 0.178873 AGACCTGAGGCCCCAACTAA 60.179 55.000 0.00 0.00 0.00 2.24
2750 3475 0.253327 GACCTGAGGCCCCAACTAAG 59.747 60.000 0.00 0.00 0.00 2.18
2751 3476 1.077429 CCTGAGGCCCCAACTAAGC 60.077 63.158 0.00 0.00 0.00 3.09
2755 3480 2.763902 GGCCCCAACTAAGCCACT 59.236 61.111 0.00 0.00 46.34 4.00
2756 3481 1.076727 GGCCCCAACTAAGCCACTT 59.923 57.895 0.00 0.00 46.34 3.16
2757 3482 0.330267 GGCCCCAACTAAGCCACTTA 59.670 55.000 0.00 0.00 46.34 2.24
2758 3483 1.460504 GCCCCAACTAAGCCACTTAC 58.539 55.000 0.00 0.00 0.00 2.34
2759 3484 1.953785 GCCCCAACTAAGCCACTTACC 60.954 57.143 0.00 0.00 0.00 2.85
2760 3485 1.677820 CCCCAACTAAGCCACTTACCG 60.678 57.143 0.00 0.00 0.00 4.02
2761 3486 1.276989 CCCAACTAAGCCACTTACCGA 59.723 52.381 0.00 0.00 0.00 4.69
2762 3487 2.618053 CCAACTAAGCCACTTACCGAG 58.382 52.381 0.00 0.00 0.00 4.63
2763 3488 2.028385 CCAACTAAGCCACTTACCGAGT 60.028 50.000 0.00 0.00 39.89 4.18
2764 3489 3.194116 CCAACTAAGCCACTTACCGAGTA 59.806 47.826 0.00 0.00 36.65 2.59
2765 3490 4.142004 CCAACTAAGCCACTTACCGAGTAT 60.142 45.833 0.00 0.00 36.65 2.12
2766 3491 4.650754 ACTAAGCCACTTACCGAGTATG 57.349 45.455 0.00 0.00 36.65 2.39
2767 3492 2.311124 AAGCCACTTACCGAGTATGC 57.689 50.000 0.00 0.00 36.65 3.14
2768 3493 0.102481 AGCCACTTACCGAGTATGCG 59.898 55.000 0.00 0.00 39.21 4.73
2775 3500 2.125713 CCGAGTATGCGGCACACA 60.126 61.111 14.53 0.00 45.38 3.72
2776 3501 2.452813 CCGAGTATGCGGCACACAC 61.453 63.158 14.53 6.45 45.38 3.82
2777 3502 2.452813 CGAGTATGCGGCACACACC 61.453 63.158 14.53 4.07 0.00 4.16
2787 3512 4.293648 CACACACCGGTCCAGCGA 62.294 66.667 2.59 0.00 0.00 4.93
2788 3513 3.542676 ACACACCGGTCCAGCGAA 61.543 61.111 2.59 0.00 0.00 4.70
2789 3514 3.041940 CACACCGGTCCAGCGAAC 61.042 66.667 2.59 0.00 0.00 3.95
2790 3515 3.542676 ACACCGGTCCAGCGAACA 61.543 61.111 2.59 0.00 0.00 3.18
2791 3516 3.041940 CACCGGTCCAGCGAACAC 61.042 66.667 2.59 0.00 0.00 3.32
2792 3517 3.542676 ACCGGTCCAGCGAACACA 61.543 61.111 0.00 0.00 0.00 3.72
2793 3518 3.041940 CCGGTCCAGCGAACACAC 61.042 66.667 0.00 0.00 0.00 3.82
2794 3519 2.279851 CGGTCCAGCGAACACACA 60.280 61.111 0.00 0.00 0.00 3.72
2795 3520 1.885388 CGGTCCAGCGAACACACAA 60.885 57.895 0.00 0.00 0.00 3.33
2796 3521 1.433053 CGGTCCAGCGAACACACAAA 61.433 55.000 0.00 0.00 0.00 2.83
2797 3522 0.307760 GGTCCAGCGAACACACAAAG 59.692 55.000 0.00 0.00 0.00 2.77
2798 3523 0.307760 GTCCAGCGAACACACAAAGG 59.692 55.000 0.00 0.00 0.00 3.11
2799 3524 1.008538 CCAGCGAACACACAAAGGC 60.009 57.895 0.00 0.00 0.00 4.35
2800 3525 1.008538 CAGCGAACACACAAAGGCC 60.009 57.895 0.00 0.00 0.00 5.19
2801 3526 2.051345 GCGAACACACAAAGGCCG 60.051 61.111 0.00 0.00 0.00 6.13
2802 3527 2.051345 CGAACACACAAAGGCCGC 60.051 61.111 0.00 0.00 0.00 6.53
2803 3528 2.829206 CGAACACACAAAGGCCGCA 61.829 57.895 0.00 0.00 0.00 5.69
2804 3529 1.299089 GAACACACAAAGGCCGCAC 60.299 57.895 0.00 0.00 0.00 5.34
2805 3530 2.677573 GAACACACAAAGGCCGCACC 62.678 60.000 0.00 0.00 39.61 5.01
2806 3531 4.326766 CACACAAAGGCCGCACCG 62.327 66.667 0.00 0.00 46.52 4.94
2818 3543 2.755469 GCACCGCCACCAATCCAT 60.755 61.111 0.00 0.00 0.00 3.41
2819 3544 2.774799 GCACCGCCACCAATCCATC 61.775 63.158 0.00 0.00 0.00 3.51
2820 3545 1.077501 CACCGCCACCAATCCATCT 60.078 57.895 0.00 0.00 0.00 2.90
2821 3546 0.680921 CACCGCCACCAATCCATCTT 60.681 55.000 0.00 0.00 0.00 2.40
2822 3547 0.394352 ACCGCCACCAATCCATCTTC 60.394 55.000 0.00 0.00 0.00 2.87
2823 3548 0.394216 CCGCCACCAATCCATCTTCA 60.394 55.000 0.00 0.00 0.00 3.02
2824 3549 1.019673 CGCCACCAATCCATCTTCAG 58.980 55.000 0.00 0.00 0.00 3.02
2825 3550 1.407299 CGCCACCAATCCATCTTCAGA 60.407 52.381 0.00 0.00 0.00 3.27
2826 3551 2.295885 GCCACCAATCCATCTTCAGAG 58.704 52.381 0.00 0.00 0.00 3.35
2827 3552 2.295885 CCACCAATCCATCTTCAGAGC 58.704 52.381 0.00 0.00 0.00 4.09
2828 3553 2.092538 CCACCAATCCATCTTCAGAGCT 60.093 50.000 0.00 0.00 0.00 4.09
2829 3554 2.943690 CACCAATCCATCTTCAGAGCTG 59.056 50.000 0.00 0.00 0.00 4.24
2830 3555 2.575279 ACCAATCCATCTTCAGAGCTGT 59.425 45.455 0.00 0.00 0.00 4.40
2831 3556 3.776969 ACCAATCCATCTTCAGAGCTGTA 59.223 43.478 0.00 0.00 0.00 2.74
2832 3557 4.125703 CCAATCCATCTTCAGAGCTGTAC 58.874 47.826 0.00 0.00 0.00 2.90
2833 3558 4.141756 CCAATCCATCTTCAGAGCTGTACT 60.142 45.833 0.00 0.00 0.00 2.73
2834 3559 4.669206 ATCCATCTTCAGAGCTGTACTG 57.331 45.455 0.00 0.00 36.80 2.74
2835 3560 3.701664 TCCATCTTCAGAGCTGTACTGA 58.298 45.455 3.61 0.00 41.70 3.41
2836 3561 3.445450 TCCATCTTCAGAGCTGTACTGAC 59.555 47.826 3.21 0.00 42.84 3.51
2837 3562 3.433709 CATCTTCAGAGCTGTACTGACG 58.566 50.000 3.21 2.59 42.84 4.35
2838 3563 1.200252 TCTTCAGAGCTGTACTGACGC 59.800 52.381 3.21 0.00 42.84 5.19
2839 3564 0.958822 TTCAGAGCTGTACTGACGCA 59.041 50.000 3.21 0.00 42.84 5.24
2840 3565 1.177401 TCAGAGCTGTACTGACGCAT 58.823 50.000 3.61 0.00 39.10 4.73
2841 3566 1.133216 TCAGAGCTGTACTGACGCATC 59.867 52.381 3.61 0.00 39.10 3.91
2842 3567 1.135286 CAGAGCTGTACTGACGCATCA 60.135 52.381 3.61 0.00 37.54 3.07
2843 3568 1.546029 AGAGCTGTACTGACGCATCAA 59.454 47.619 3.61 0.00 33.30 2.57
2844 3569 1.656095 GAGCTGTACTGACGCATCAAC 59.344 52.381 3.61 0.00 33.30 3.18
2845 3570 0.721718 GCTGTACTGACGCATCAACC 59.278 55.000 3.61 0.00 33.30 3.77
2846 3571 1.673033 GCTGTACTGACGCATCAACCT 60.673 52.381 3.61 0.00 33.30 3.50
2847 3572 2.688507 CTGTACTGACGCATCAACCTT 58.311 47.619 0.00 0.00 33.30 3.50
2848 3573 2.412870 TGTACTGACGCATCAACCTTG 58.587 47.619 0.00 0.00 33.30 3.61
2849 3574 1.128692 GTACTGACGCATCAACCTTGC 59.871 52.381 0.00 0.00 33.30 4.01
2850 3575 1.237285 ACTGACGCATCAACCTTGCC 61.237 55.000 0.00 0.00 36.75 4.52
2851 3576 0.957395 CTGACGCATCAACCTTGCCT 60.957 55.000 0.00 0.00 36.75 4.75
2852 3577 1.236616 TGACGCATCAACCTTGCCTG 61.237 55.000 0.00 0.00 36.75 4.85
2853 3578 1.926511 GACGCATCAACCTTGCCTGG 61.927 60.000 0.00 0.00 36.75 4.45
2854 3579 1.973281 CGCATCAACCTTGCCTGGT 60.973 57.895 0.00 0.00 43.11 4.00
2855 3580 1.885871 GCATCAACCTTGCCTGGTC 59.114 57.895 0.00 0.00 39.83 4.02
2856 3581 0.610232 GCATCAACCTTGCCTGGTCT 60.610 55.000 0.00 0.00 39.83 3.85
2857 3582 1.340017 GCATCAACCTTGCCTGGTCTA 60.340 52.381 0.00 0.00 39.83 2.59
2858 3583 2.636830 CATCAACCTTGCCTGGTCTAG 58.363 52.381 0.00 0.00 39.83 2.43
2859 3584 0.324943 TCAACCTTGCCTGGTCTAGC 59.675 55.000 0.00 0.00 39.83 3.42
2860 3585 0.326264 CAACCTTGCCTGGTCTAGCT 59.674 55.000 0.00 0.00 39.83 3.32
2861 3586 0.326264 AACCTTGCCTGGTCTAGCTG 59.674 55.000 0.00 0.00 39.83 4.24
2862 3587 1.451028 CCTTGCCTGGTCTAGCTGC 60.451 63.158 0.00 0.00 0.00 5.25
2863 3588 1.451028 CTTGCCTGGTCTAGCTGCC 60.451 63.158 0.00 0.00 0.00 4.85
2864 3589 3.315142 TTGCCTGGTCTAGCTGCCG 62.315 63.158 0.00 0.00 0.00 5.69
2865 3590 3.775654 GCCTGGTCTAGCTGCCGT 61.776 66.667 0.00 0.00 0.00 5.68
2866 3591 2.423898 GCCTGGTCTAGCTGCCGTA 61.424 63.158 0.00 0.00 0.00 4.02
2867 3592 1.736586 CCTGGTCTAGCTGCCGTAG 59.263 63.158 0.00 0.00 0.00 3.51
2868 3593 0.752009 CCTGGTCTAGCTGCCGTAGA 60.752 60.000 0.00 0.00 0.00 2.59
2869 3594 0.382515 CTGGTCTAGCTGCCGTAGAC 59.617 60.000 16.52 16.52 43.91 2.59
2870 3595 1.355916 GGTCTAGCTGCCGTAGACG 59.644 63.158 17.58 0.00 45.06 4.18
2871 3596 1.298488 GTCTAGCTGCCGTAGACGC 60.298 63.158 11.72 0.00 37.68 5.19
2872 3597 2.026301 CTAGCTGCCGTAGACGCC 59.974 66.667 0.00 0.00 38.18 5.68
2873 3598 2.752640 TAGCTGCCGTAGACGCCA 60.753 61.111 0.00 0.00 38.18 5.69
2874 3599 2.938539 CTAGCTGCCGTAGACGCCAC 62.939 65.000 0.00 0.00 38.18 5.01
2876 3601 4.063967 CTGCCGTAGACGCCACCA 62.064 66.667 0.00 0.00 38.18 4.17
2877 3602 4.367023 TGCCGTAGACGCCACCAC 62.367 66.667 0.00 0.00 38.18 4.16
2879 3604 3.740397 CCGTAGACGCCACCACGA 61.740 66.667 0.00 0.00 36.53 4.35
2880 3605 2.503375 CGTAGACGCCACCACGAC 60.503 66.667 0.00 0.00 36.53 4.34
2881 3606 2.503375 GTAGACGCCACCACGACG 60.503 66.667 0.00 0.00 36.70 5.12
2882 3607 4.409218 TAGACGCCACCACGACGC 62.409 66.667 0.00 0.00 36.70 5.19
2888 3613 4.293648 CCACCACGACGCCAGACA 62.294 66.667 0.00 0.00 0.00 3.41
2889 3614 2.279851 CACCACGACGCCAGACAA 60.280 61.111 0.00 0.00 0.00 3.18
2890 3615 2.279918 ACCACGACGCCAGACAAC 60.280 61.111 0.00 0.00 0.00 3.32
2891 3616 3.403057 CCACGACGCCAGACAACG 61.403 66.667 0.00 0.00 0.00 4.10
2892 3617 4.059459 CACGACGCCAGACAACGC 62.059 66.667 0.00 0.00 0.00 4.84
2895 3620 3.712881 GACGCCAGACAACGCCAC 61.713 66.667 0.00 0.00 0.00 5.01
2898 3623 2.672996 GCCAGACAACGCCACCAT 60.673 61.111 0.00 0.00 0.00 3.55
2899 3624 2.690778 GCCAGACAACGCCACCATC 61.691 63.158 0.00 0.00 0.00 3.51
2900 3625 2.040544 CCAGACAACGCCACCATCC 61.041 63.158 0.00 0.00 0.00 3.51
2901 3626 1.003355 CAGACAACGCCACCATCCT 60.003 57.895 0.00 0.00 0.00 3.24
2902 3627 0.249120 CAGACAACGCCACCATCCTA 59.751 55.000 0.00 0.00 0.00 2.94
2903 3628 0.249398 AGACAACGCCACCATCCTAC 59.751 55.000 0.00 0.00 0.00 3.18
2904 3629 1.079405 ACAACGCCACCATCCTACG 60.079 57.895 0.00 0.00 0.00 3.51
2905 3630 2.125269 AACGCCACCATCCTACGC 60.125 61.111 0.00 0.00 0.00 4.42
2906 3631 2.656069 AACGCCACCATCCTACGCT 61.656 57.895 0.00 0.00 0.00 5.07
2907 3632 2.279517 CGCCACCATCCTACGCTC 60.280 66.667 0.00 0.00 0.00 5.03
2908 3633 2.279517 GCCACCATCCTACGCTCG 60.280 66.667 0.00 0.00 0.00 5.03
2909 3634 3.077519 GCCACCATCCTACGCTCGT 62.078 63.158 0.00 0.00 0.00 4.18
2910 3635 1.065928 CCACCATCCTACGCTCGTC 59.934 63.158 0.00 0.00 0.00 4.20
2911 3636 1.065928 CACCATCCTACGCTCGTCC 59.934 63.158 0.00 0.00 0.00 4.79
2912 3637 1.379443 ACCATCCTACGCTCGTCCA 60.379 57.895 0.00 0.00 0.00 4.02
2913 3638 0.755698 ACCATCCTACGCTCGTCCAT 60.756 55.000 0.00 0.00 0.00 3.41
2914 3639 0.039074 CCATCCTACGCTCGTCCATC 60.039 60.000 0.00 0.00 0.00 3.51
2915 3640 0.668535 CATCCTACGCTCGTCCATCA 59.331 55.000 0.00 0.00 0.00 3.07
2916 3641 1.067060 CATCCTACGCTCGTCCATCAA 59.933 52.381 0.00 0.00 0.00 2.57
2917 3642 0.454600 TCCTACGCTCGTCCATCAAC 59.545 55.000 0.00 0.00 0.00 3.18
2918 3643 0.172578 CCTACGCTCGTCCATCAACA 59.827 55.000 0.00 0.00 0.00 3.33
2919 3644 1.269166 CTACGCTCGTCCATCAACAC 58.731 55.000 0.00 0.00 0.00 3.32
2920 3645 0.599060 TACGCTCGTCCATCAACACA 59.401 50.000 0.00 0.00 0.00 3.72
2921 3646 0.944311 ACGCTCGTCCATCAACACAC 60.944 55.000 0.00 0.00 0.00 3.82
2922 3647 0.943835 CGCTCGTCCATCAACACACA 60.944 55.000 0.00 0.00 0.00 3.72
2923 3648 0.512952 GCTCGTCCATCAACACACAC 59.487 55.000 0.00 0.00 0.00 3.82
2924 3649 1.148310 CTCGTCCATCAACACACACC 58.852 55.000 0.00 0.00 0.00 4.16
2925 3650 0.250124 TCGTCCATCAACACACACCC 60.250 55.000 0.00 0.00 0.00 4.61
2926 3651 0.533978 CGTCCATCAACACACACCCA 60.534 55.000 0.00 0.00 0.00 4.51
2927 3652 1.238439 GTCCATCAACACACACCCAG 58.762 55.000 0.00 0.00 0.00 4.45
2928 3653 0.537143 TCCATCAACACACACCCAGC 60.537 55.000 0.00 0.00 0.00 4.85
2929 3654 0.822944 CCATCAACACACACCCAGCA 60.823 55.000 0.00 0.00 0.00 4.41
2930 3655 0.594602 CATCAACACACACCCAGCAG 59.405 55.000 0.00 0.00 0.00 4.24
2931 3656 1.174712 ATCAACACACACCCAGCAGC 61.175 55.000 0.00 0.00 0.00 5.25
2932 3657 2.901840 AACACACACCCAGCAGCG 60.902 61.111 0.00 0.00 0.00 5.18
2933 3658 3.399105 AACACACACCCAGCAGCGA 62.399 57.895 0.00 0.00 0.00 4.93
2934 3659 2.591429 CACACACCCAGCAGCGAA 60.591 61.111 0.00 0.00 0.00 4.70
2935 3660 2.186160 CACACACCCAGCAGCGAAA 61.186 57.895 0.00 0.00 0.00 3.46
2936 3661 2.186826 ACACACCCAGCAGCGAAAC 61.187 57.895 0.00 0.00 0.00 2.78
2937 3662 2.594592 ACACCCAGCAGCGAAACC 60.595 61.111 0.00 0.00 0.00 3.27
2938 3663 3.365265 CACCCAGCAGCGAAACCC 61.365 66.667 0.00 0.00 0.00 4.11
2939 3664 4.660938 ACCCAGCAGCGAAACCCC 62.661 66.667 0.00 0.00 0.00 4.95
2948 3673 2.668212 CGAAACCCCGCTGCTTCA 60.668 61.111 0.00 0.00 0.00 3.02
2949 3674 2.040544 CGAAACCCCGCTGCTTCAT 61.041 57.895 0.00 0.00 0.00 2.57
2950 3675 1.508088 GAAACCCCGCTGCTTCATG 59.492 57.895 0.00 0.00 0.00 3.07
2951 3676 2.548127 GAAACCCCGCTGCTTCATGC 62.548 60.000 0.00 0.00 43.25 4.06
2957 3682 3.129502 GCTGCTTCATGCCGCTGA 61.130 61.111 14.06 0.00 46.27 4.26
2958 3683 2.693762 GCTGCTTCATGCCGCTGAA 61.694 57.895 14.06 0.00 46.27 3.02
2959 3684 1.878070 CTGCTTCATGCCGCTGAAA 59.122 52.632 7.42 0.00 42.00 2.69
2960 3685 0.455633 CTGCTTCATGCCGCTGAAAC 60.456 55.000 7.42 3.97 42.00 2.78
2961 3686 1.153958 GCTTCATGCCGCTGAAACC 60.154 57.895 6.69 0.04 34.86 3.27
2962 3687 1.508088 CTTCATGCCGCTGAAACCC 59.492 57.895 6.69 0.00 34.86 4.11
2963 3688 2.257286 CTTCATGCCGCTGAAACCCG 62.257 60.000 6.69 0.00 34.86 5.28
2964 3689 4.481112 CATGCCGCTGAAACCCGC 62.481 66.667 0.00 0.00 0.00 6.13
2969 3694 4.084888 CGCTGAAACCCGCCGTTC 62.085 66.667 0.00 0.00 31.78 3.95
2970 3695 2.668550 GCTGAAACCCGCCGTTCT 60.669 61.111 0.00 0.00 31.78 3.01
2971 3696 2.677979 GCTGAAACCCGCCGTTCTC 61.678 63.158 0.00 0.00 31.78 2.87
2972 3697 1.004918 CTGAAACCCGCCGTTCTCT 60.005 57.895 0.00 0.00 31.78 3.10
2973 3698 1.005394 TGAAACCCGCCGTTCTCTC 60.005 57.895 0.00 0.00 31.78 3.20
2974 3699 1.005394 GAAACCCGCCGTTCTCTCA 60.005 57.895 0.00 0.00 31.78 3.27
2975 3700 0.601841 GAAACCCGCCGTTCTCTCAA 60.602 55.000 0.00 0.00 31.78 3.02
2976 3701 0.883370 AAACCCGCCGTTCTCTCAAC 60.883 55.000 0.00 0.00 31.78 3.18
2977 3702 2.809601 CCCGCCGTTCTCTCAACG 60.810 66.667 0.00 0.00 42.74 4.10
2978 3703 2.049433 CCGCCGTTCTCTCAACGT 60.049 61.111 6.18 0.00 41.64 3.99
2979 3704 2.372690 CCGCCGTTCTCTCAACGTG 61.373 63.158 6.18 0.00 41.64 4.49
2980 3705 1.660575 CGCCGTTCTCTCAACGTGT 60.661 57.895 6.18 0.00 41.64 4.49
2981 3706 1.606350 CGCCGTTCTCTCAACGTGTC 61.606 60.000 6.18 0.00 41.64 3.67
2982 3707 0.318784 GCCGTTCTCTCAACGTGTCT 60.319 55.000 6.18 0.00 41.64 3.41
2983 3708 1.409412 CCGTTCTCTCAACGTGTCTG 58.591 55.000 6.18 0.00 41.64 3.51
2984 3709 1.001706 CCGTTCTCTCAACGTGTCTGA 60.002 52.381 6.18 0.00 41.64 3.27
2985 3710 2.351835 CCGTTCTCTCAACGTGTCTGAT 60.352 50.000 6.18 0.00 41.64 2.90
2986 3711 2.911723 CGTTCTCTCAACGTGTCTGATC 59.088 50.000 0.00 0.00 38.69 2.92
2987 3712 3.365465 CGTTCTCTCAACGTGTCTGATCT 60.365 47.826 0.00 0.00 38.69 2.75
2992 3717 1.691976 TCAACGTGTCTGATCTGGGTT 59.308 47.619 0.00 0.00 0.00 4.11
2996 3721 0.326264 GTGTCTGATCTGGGTTGGCT 59.674 55.000 0.00 0.00 0.00 4.75
3030 3755 1.352622 TGGGCTTCACCTCAGTTGGT 61.353 55.000 0.00 0.00 41.77 3.67
3031 3756 0.178990 GGGCTTCACCTCAGTTGGTT 60.179 55.000 0.00 0.00 38.45 3.67
3047 3772 4.278419 AGTTGGTTGGCTTTATCACAGAAC 59.722 41.667 0.00 0.00 0.00 3.01
3051 3776 5.163513 GGTTGGCTTTATCACAGAACAATG 58.836 41.667 0.00 0.00 0.00 2.82
3066 3792 9.559732 CACAGAACAATGTATATTATGAAGGGA 57.440 33.333 0.00 0.00 0.00 4.20
3082 3808 2.906568 AGGGAAAAATGCCACCTGATT 58.093 42.857 0.00 0.00 0.00 2.57
3084 3810 4.623863 AGGGAAAAATGCCACCTGATTAT 58.376 39.130 0.00 0.00 0.00 1.28
3092 3818 5.605540 ATGCCACCTGATTATATCCCTTT 57.394 39.130 0.00 0.00 0.00 3.11
3110 3836 3.120060 CCTTTCGTCTTTCAATCAGCAGG 60.120 47.826 0.00 0.00 0.00 4.85
3119 3845 4.890158 TTCAATCAGCAGGTGTTCTCTA 57.110 40.909 0.00 0.00 0.00 2.43
3140 4046 2.434359 GTACTGGCGGCACAGGAC 60.434 66.667 7.97 15.07 44.41 3.85
3146 4052 4.626081 GCGGCACAGGACAGTGGT 62.626 66.667 0.00 0.00 39.87 4.16
3193 4105 2.159824 GCATCATTCGGAGCATGAGATG 59.840 50.000 0.00 0.00 34.12 2.90
3209 4121 1.375098 GATGGCAGGAACAGAGCAGC 61.375 60.000 0.00 0.00 0.00 5.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.224523 TGGCGAGAACTGTGAAATTCCT 60.225 45.455 0.00 0.00 0.00 3.36
58 59 2.087009 GGACGCACGCACTACACTC 61.087 63.158 0.00 0.00 0.00 3.51
94 95 6.299141 TCTCCCCAGATTTAATAGCACATTC 58.701 40.000 0.00 0.00 0.00 2.67
96 97 5.912149 TCTCCCCAGATTTAATAGCACAT 57.088 39.130 0.00 0.00 0.00 3.21
103 104 4.446889 GGTGCTGATCTCCCCAGATTTAAT 60.447 45.833 0.00 0.00 39.71 1.40
106 107 1.213926 GGTGCTGATCTCCCCAGATTT 59.786 52.381 0.00 0.00 39.71 2.17
127 128 1.098712 GGCGATCCTCGTCTCTGACT 61.099 60.000 0.00 0.00 41.94 3.41
129 130 2.180862 CGGCGATCCTCGTCTCTGA 61.181 63.158 0.00 0.00 43.21 3.27
130 131 2.329690 CGGCGATCCTCGTCTCTG 59.670 66.667 0.00 0.00 43.21 3.35
131 132 3.587933 GCGGCGATCCTCGTCTCT 61.588 66.667 12.98 0.00 43.21 3.10
132 133 4.632458 GGCGGCGATCCTCGTCTC 62.632 72.222 12.98 0.00 43.21 3.36
166 724 2.339712 GCCATGGCGTGCTTGTTT 59.660 55.556 23.48 0.00 0.00 2.83
170 728 3.367743 CACTGCCATGGCGTGCTT 61.368 61.111 33.11 16.15 45.51 3.91
184 742 4.569180 AAGCGCTGGTGCCACACT 62.569 61.111 12.58 0.00 34.40 3.55
208 766 0.457166 CGTTCTCCGTGGCGACATTA 60.457 55.000 0.00 0.00 46.14 1.90
220 778 1.446272 CGCCCAGAACTCGTTCTCC 60.446 63.158 9.24 1.57 46.13 3.71
457 1021 2.352323 GCATAGTTCAAACCCCAAACCG 60.352 50.000 0.00 0.00 0.00 4.44
614 1204 1.296392 CGTGCAGGAGGATGGTTGA 59.704 57.895 0.00 0.00 0.00 3.18
674 1268 2.162408 GCACTGTAAAGCATCTCCAACC 59.838 50.000 0.00 0.00 0.00 3.77
781 1380 8.237949 CGGTAATAGTGATCGATCAGAGTAATT 58.762 37.037 27.95 21.31 37.51 1.40
810 1434 2.540361 GCGCTGTGAATTGTCATCATCC 60.540 50.000 0.00 0.00 35.80 3.51
930 1558 1.326951 GCTGAGGAGAGAGGGGTGTC 61.327 65.000 0.00 0.00 0.00 3.67
956 1587 3.515901 CGGGGGAATTTATAGAGGGAGAG 59.484 52.174 0.00 0.00 0.00 3.20
1033 1664 2.551071 GGATATTTTGAGGGGCGAGAGG 60.551 54.545 0.00 0.00 0.00 3.69
1236 1874 4.640855 ACTGGTGTGGCGTCGTCG 62.641 66.667 0.00 0.00 40.37 5.12
1314 1976 5.106712 TGCGGTTGAACACTCAATTTAGATC 60.107 40.000 0.00 0.00 43.39 2.75
1315 1977 4.759693 TGCGGTTGAACACTCAATTTAGAT 59.240 37.500 0.00 0.00 43.39 1.98
1316 1978 4.130857 TGCGGTTGAACACTCAATTTAGA 58.869 39.130 0.00 0.00 43.39 2.10
1317 1979 4.481930 TGCGGTTGAACACTCAATTTAG 57.518 40.909 0.00 0.00 43.39 1.85
1318 1980 4.902443 TTGCGGTTGAACACTCAATTTA 57.098 36.364 0.00 0.00 43.39 1.40
1319 1981 3.791973 TTGCGGTTGAACACTCAATTT 57.208 38.095 0.00 0.00 43.39 1.82
1320 1982 3.068024 ACATTGCGGTTGAACACTCAATT 59.932 39.130 0.00 0.00 43.39 2.32
1321 1983 2.622942 ACATTGCGGTTGAACACTCAAT 59.377 40.909 0.00 0.79 43.39 2.57
1322 1984 2.020720 ACATTGCGGTTGAACACTCAA 58.979 42.857 0.00 0.00 39.30 3.02
1323 1985 1.333308 CACATTGCGGTTGAACACTCA 59.667 47.619 0.00 0.00 0.00 3.41
1352 2014 3.346315 CACCCACATGCACTTGAGAATA 58.654 45.455 0.00 0.00 0.00 1.75
1743 2405 2.263077 CATGGCGTGAGTAGACAAGAC 58.737 52.381 0.00 0.00 0.00 3.01
1803 2480 6.208994 GCTAGCTAGCTAGTACCCAAGAATTA 59.791 42.308 39.05 12.07 45.67 1.40
1864 2553 3.574445 GCCTCAGCAGCTGCATCG 61.574 66.667 38.24 25.77 45.16 3.84
2113 2805 2.605607 TACACCCCTCCGACTCCGA 61.606 63.158 0.00 0.00 38.22 4.55
2114 2806 2.044650 TACACCCCTCCGACTCCG 60.045 66.667 0.00 0.00 0.00 4.63
2115 2807 2.413142 CGTACACCCCTCCGACTCC 61.413 68.421 0.00 0.00 0.00 3.85
2116 2808 0.750911 ATCGTACACCCCTCCGACTC 60.751 60.000 0.00 0.00 31.43 3.36
2117 2809 0.750911 GATCGTACACCCCTCCGACT 60.751 60.000 0.00 0.00 31.43 4.18
2118 2810 1.033746 TGATCGTACACCCCTCCGAC 61.034 60.000 0.00 0.00 31.43 4.79
2282 2998 1.758280 CCACCCATTGATGACCCATTG 59.242 52.381 0.00 0.00 0.00 2.82
2283 2999 1.645391 TCCACCCATTGATGACCCATT 59.355 47.619 0.00 0.00 0.00 3.16
2284 3000 1.307878 TCCACCCATTGATGACCCAT 58.692 50.000 0.00 0.00 0.00 4.00
2285 3001 1.063792 CATCCACCCATTGATGACCCA 60.064 52.381 0.00 0.00 40.64 4.51
2286 3002 1.696063 CATCCACCCATTGATGACCC 58.304 55.000 0.00 0.00 40.64 4.46
2287 3003 1.035139 GCATCCACCCATTGATGACC 58.965 55.000 3.80 0.00 40.64 4.02
2288 3004 1.035139 GGCATCCACCCATTGATGAC 58.965 55.000 3.80 0.00 40.64 3.06
2289 3005 3.518766 GGCATCCACCCATTGATGA 57.481 52.632 3.80 0.00 40.64 2.92
2340 3056 6.432162 CCAATTCATAATGTACATGGCTAGCT 59.568 38.462 15.72 0.00 0.00 3.32
2341 3057 6.207417 ACCAATTCATAATGTACATGGCTAGC 59.793 38.462 9.63 6.04 0.00 3.42
2342 3058 7.750229 ACCAATTCATAATGTACATGGCTAG 57.250 36.000 9.63 0.00 0.00 3.42
2343 3059 9.806448 ATTACCAATTCATAATGTACATGGCTA 57.194 29.630 9.63 0.00 0.00 3.93
2384 3103 7.391275 CACTTGCATGATGATAACCCATACATA 59.609 37.037 6.60 0.00 0.00 2.29
2385 3104 6.208007 CACTTGCATGATGATAACCCATACAT 59.792 38.462 6.60 0.00 0.00 2.29
2387 3106 5.048504 CCACTTGCATGATGATAACCCATAC 60.049 44.000 6.60 0.00 0.00 2.39
2389 3108 3.893200 CCACTTGCATGATGATAACCCAT 59.107 43.478 6.60 0.00 0.00 4.00
2422 3143 6.211584 ACACCATTAGACATCACTAGTTCAGT 59.788 38.462 0.00 0.00 38.32 3.41
2433 3154 5.423015 ACTGTGATCACACCATTAGACATC 58.577 41.667 24.56 0.00 45.40 3.06
2456 3180 3.581755 GACTACACATACGCCTTGTGAA 58.418 45.455 16.87 0.00 45.83 3.18
2473 3197 5.876357 AGCAAAAGACTACAAATGGGACTA 58.124 37.500 0.00 0.00 0.00 2.59
2487 3212 8.451687 AAAATCAAAAAGCAAAAGCAAAAGAC 57.548 26.923 0.00 0.00 0.00 3.01
2511 3236 9.442062 AGGGTCTTCCTCCTTTTTAAAAATAAA 57.558 29.630 13.55 2.49 44.06 1.40
2528 3253 1.749033 CATAGGCCGAGGGTCTTCC 59.251 63.158 0.00 0.00 39.09 3.46
2529 3254 1.069935 GCATAGGCCGAGGGTCTTC 59.930 63.158 0.00 0.00 39.09 2.87
2530 3255 1.689233 TGCATAGGCCGAGGGTCTT 60.689 57.895 0.00 0.00 39.09 3.01
2531 3256 2.041922 TGCATAGGCCGAGGGTCT 60.042 61.111 0.00 0.00 42.13 3.85
2532 3257 2.109181 GTGCATAGGCCGAGGGTC 59.891 66.667 0.00 0.00 40.13 4.46
2533 3258 3.480133 GGTGCATAGGCCGAGGGT 61.480 66.667 0.00 0.00 40.13 4.34
2534 3259 3.164269 AGGTGCATAGGCCGAGGG 61.164 66.667 0.00 0.00 40.13 4.30
2535 3260 2.109799 CAGGTGCATAGGCCGAGG 59.890 66.667 0.00 0.00 40.13 4.63
2536 3261 2.109799 CCAGGTGCATAGGCCGAG 59.890 66.667 0.00 0.00 40.13 4.63
2537 3262 3.479203 CCCAGGTGCATAGGCCGA 61.479 66.667 0.00 0.00 40.13 5.54
2540 3265 3.482232 ATCGCCCAGGTGCATAGGC 62.482 63.158 8.68 8.68 42.18 3.93
2541 3266 1.302033 GATCGCCCAGGTGCATAGG 60.302 63.158 0.00 0.00 0.00 2.57
2542 3267 1.302033 GGATCGCCCAGGTGCATAG 60.302 63.158 0.00 0.00 34.14 2.23
2543 3268 2.069430 TGGATCGCCCAGGTGCATA 61.069 57.895 0.00 0.00 40.82 3.14
2544 3269 3.410628 TGGATCGCCCAGGTGCAT 61.411 61.111 0.00 0.00 40.82 3.96
2552 3277 4.881440 TGGCTGCATGGATCGCCC 62.881 66.667 13.83 1.51 41.80 6.13
2553 3278 1.741327 AAATGGCTGCATGGATCGCC 61.741 55.000 10.17 10.17 42.78 5.54
2554 3279 0.103572 AAAATGGCTGCATGGATCGC 59.896 50.000 0.50 0.00 0.00 4.58
2555 3280 3.928727 ATAAAATGGCTGCATGGATCG 57.071 42.857 0.50 0.00 0.00 3.69
2556 3281 9.880157 ATAATTAATAAAATGGCTGCATGGATC 57.120 29.630 0.50 0.00 0.00 3.36
2558 3283 9.709495 GAATAATTAATAAAATGGCTGCATGGA 57.291 29.630 0.50 0.00 0.00 3.41
2559 3284 9.491675 TGAATAATTAATAAAATGGCTGCATGG 57.508 29.630 0.50 0.00 0.00 3.66
2586 3311 9.872757 CGCTGTATTTCTTTGTAAAGTCTTTTA 57.127 29.630 2.51 0.00 37.31 1.52
2587 3312 7.860872 CCGCTGTATTTCTTTGTAAAGTCTTTT 59.139 33.333 2.51 0.00 37.31 2.27
2588 3313 7.012989 ACCGCTGTATTTCTTTGTAAAGTCTTT 59.987 33.333 2.81 2.81 37.31 2.52
2589 3314 6.485648 ACCGCTGTATTTCTTTGTAAAGTCTT 59.514 34.615 4.45 0.00 37.31 3.01
2590 3315 5.995897 ACCGCTGTATTTCTTTGTAAAGTCT 59.004 36.000 4.45 0.00 37.31 3.24
2591 3316 6.237313 ACCGCTGTATTTCTTTGTAAAGTC 57.763 37.500 4.45 0.00 37.31 3.01
2592 3317 7.443272 ACTTACCGCTGTATTTCTTTGTAAAGT 59.557 33.333 4.45 0.00 37.31 2.66
2593 3318 7.803724 ACTTACCGCTGTATTTCTTTGTAAAG 58.196 34.615 0.00 0.00 37.36 1.85
2594 3319 7.658575 AGACTTACCGCTGTATTTCTTTGTAAA 59.341 33.333 0.00 0.00 0.00 2.01
2595 3320 7.117236 CAGACTTACCGCTGTATTTCTTTGTAA 59.883 37.037 0.00 0.00 0.00 2.41
2596 3321 6.588756 CAGACTTACCGCTGTATTTCTTTGTA 59.411 38.462 0.00 0.00 0.00 2.41
2597 3322 5.408604 CAGACTTACCGCTGTATTTCTTTGT 59.591 40.000 0.00 0.00 0.00 2.83
2598 3323 5.637810 TCAGACTTACCGCTGTATTTCTTTG 59.362 40.000 0.00 0.00 33.90 2.77
2599 3324 5.790593 TCAGACTTACCGCTGTATTTCTTT 58.209 37.500 0.00 0.00 33.90 2.52
2600 3325 5.401531 TCAGACTTACCGCTGTATTTCTT 57.598 39.130 0.00 0.00 33.90 2.52
2601 3326 5.401531 TTCAGACTTACCGCTGTATTTCT 57.598 39.130 0.00 0.00 33.90 2.52
2602 3327 6.312918 TGATTTCAGACTTACCGCTGTATTTC 59.687 38.462 0.00 0.00 33.90 2.17
2603 3328 6.092259 GTGATTTCAGACTTACCGCTGTATTT 59.908 38.462 0.00 0.00 33.90 1.40
2604 3329 5.581085 GTGATTTCAGACTTACCGCTGTATT 59.419 40.000 0.00 0.00 33.90 1.89
2605 3330 5.109903 GTGATTTCAGACTTACCGCTGTAT 58.890 41.667 0.00 0.00 33.90 2.29
2606 3331 4.491676 GTGATTTCAGACTTACCGCTGTA 58.508 43.478 0.00 0.00 33.90 2.74
2607 3332 3.326747 GTGATTTCAGACTTACCGCTGT 58.673 45.455 0.00 0.00 33.90 4.40
2608 3333 2.673368 GGTGATTTCAGACTTACCGCTG 59.327 50.000 0.00 0.00 0.00 5.18
2609 3334 2.674177 CGGTGATTTCAGACTTACCGCT 60.674 50.000 0.00 0.00 43.50 5.52
2610 3335 1.659098 CGGTGATTTCAGACTTACCGC 59.341 52.381 0.00 0.00 43.50 5.68
2612 3337 4.189639 AGACGGTGATTTCAGACTTACC 57.810 45.455 0.00 0.00 0.00 2.85
2613 3338 5.341617 CCTAGACGGTGATTTCAGACTTAC 58.658 45.833 0.00 0.00 0.00 2.34
2614 3339 4.142227 GCCTAGACGGTGATTTCAGACTTA 60.142 45.833 0.00 0.00 34.25 2.24
2615 3340 3.368531 GCCTAGACGGTGATTTCAGACTT 60.369 47.826 0.00 0.00 34.25 3.01
2616 3341 2.166664 GCCTAGACGGTGATTTCAGACT 59.833 50.000 0.00 0.00 34.25 3.24
2617 3342 2.094182 TGCCTAGACGGTGATTTCAGAC 60.094 50.000 0.00 0.00 34.25 3.51
2618 3343 2.176045 TGCCTAGACGGTGATTTCAGA 58.824 47.619 0.00 0.00 34.25 3.27
2619 3344 2.672961 TGCCTAGACGGTGATTTCAG 57.327 50.000 0.00 0.00 34.25 3.02
2620 3345 2.037902 TGTTGCCTAGACGGTGATTTCA 59.962 45.455 0.00 0.00 34.25 2.69
2621 3346 2.695359 TGTTGCCTAGACGGTGATTTC 58.305 47.619 0.00 0.00 34.25 2.17
2622 3347 2.851263 TGTTGCCTAGACGGTGATTT 57.149 45.000 0.00 0.00 34.25 2.17
2623 3348 2.501723 AGATGTTGCCTAGACGGTGATT 59.498 45.455 0.00 0.00 34.25 2.57
2624 3349 2.111384 AGATGTTGCCTAGACGGTGAT 58.889 47.619 0.00 0.00 34.25 3.06
2625 3350 1.204704 CAGATGTTGCCTAGACGGTGA 59.795 52.381 0.00 0.00 34.25 4.02
2626 3351 1.066858 ACAGATGTTGCCTAGACGGTG 60.067 52.381 0.00 0.00 34.25 4.94
2627 3352 1.204941 GACAGATGTTGCCTAGACGGT 59.795 52.381 0.00 0.00 34.25 4.83
2628 3353 1.799181 CGACAGATGTTGCCTAGACGG 60.799 57.143 0.00 0.00 0.00 4.79
2629 3354 1.550065 CGACAGATGTTGCCTAGACG 58.450 55.000 0.00 0.00 0.00 4.18
2637 3362 2.949451 AGGAGTAGCGACAGATGTTG 57.051 50.000 0.00 0.00 0.00 3.33
2638 3363 3.570550 GGATAGGAGTAGCGACAGATGTT 59.429 47.826 0.00 0.00 0.00 2.71
2639 3364 3.150767 GGATAGGAGTAGCGACAGATGT 58.849 50.000 0.00 0.00 0.00 3.06
2640 3365 3.190327 CAGGATAGGAGTAGCGACAGATG 59.810 52.174 0.00 0.00 0.00 2.90
2641 3366 3.181438 ACAGGATAGGAGTAGCGACAGAT 60.181 47.826 0.00 0.00 0.00 2.90
2642 3367 2.172930 ACAGGATAGGAGTAGCGACAGA 59.827 50.000 0.00 0.00 0.00 3.41
2643 3368 2.577700 ACAGGATAGGAGTAGCGACAG 58.422 52.381 0.00 0.00 0.00 3.51
2644 3369 2.688446 CAACAGGATAGGAGTAGCGACA 59.312 50.000 0.00 0.00 0.00 4.35
2645 3370 2.950309 TCAACAGGATAGGAGTAGCGAC 59.050 50.000 0.00 0.00 0.00 5.19
2646 3371 3.292492 TCAACAGGATAGGAGTAGCGA 57.708 47.619 0.00 0.00 0.00 4.93
2647 3372 3.570125 TCATCAACAGGATAGGAGTAGCG 59.430 47.826 0.00 0.00 33.95 4.26
2648 3373 5.510520 CCTTCATCAACAGGATAGGAGTAGC 60.511 48.000 0.00 0.00 34.78 3.58
2649 3374 5.011533 CCCTTCATCAACAGGATAGGAGTAG 59.988 48.000 0.00 0.00 34.78 2.57
2650 3375 4.901849 CCCTTCATCAACAGGATAGGAGTA 59.098 45.833 0.00 0.00 34.78 2.59
2651 3376 3.713764 CCCTTCATCAACAGGATAGGAGT 59.286 47.826 0.00 0.00 34.78 3.85
2652 3377 3.969976 TCCCTTCATCAACAGGATAGGAG 59.030 47.826 0.00 0.00 34.78 3.69
2653 3378 4.007581 TCCCTTCATCAACAGGATAGGA 57.992 45.455 0.00 0.00 34.78 2.94
2654 3379 4.649692 CATCCCTTCATCAACAGGATAGG 58.350 47.826 0.00 0.00 35.56 2.57
2655 3380 4.070716 GCATCCCTTCATCAACAGGATAG 58.929 47.826 0.00 0.00 35.56 2.08
2656 3381 3.718434 AGCATCCCTTCATCAACAGGATA 59.282 43.478 0.00 0.00 35.56 2.59
2657 3382 2.512896 AGCATCCCTTCATCAACAGGAT 59.487 45.455 0.00 0.00 37.84 3.24
2658 3383 1.918262 AGCATCCCTTCATCAACAGGA 59.082 47.619 0.00 0.00 30.81 3.86
2659 3384 2.022195 CAGCATCCCTTCATCAACAGG 58.978 52.381 0.00 0.00 0.00 4.00
2660 3385 2.995283 TCAGCATCCCTTCATCAACAG 58.005 47.619 0.00 0.00 0.00 3.16
2661 3386 3.657398 ATCAGCATCCCTTCATCAACA 57.343 42.857 0.00 0.00 0.00 3.33
2662 3387 4.712476 ACTATCAGCATCCCTTCATCAAC 58.288 43.478 0.00 0.00 0.00 3.18
2663 3388 4.657504 AGACTATCAGCATCCCTTCATCAA 59.342 41.667 0.00 0.00 0.00 2.57
2664 3389 4.040095 CAGACTATCAGCATCCCTTCATCA 59.960 45.833 0.00 0.00 0.00 3.07
2665 3390 4.282957 TCAGACTATCAGCATCCCTTCATC 59.717 45.833 0.00 0.00 0.00 2.92
2666 3391 4.229639 TCAGACTATCAGCATCCCTTCAT 58.770 43.478 0.00 0.00 0.00 2.57
2667 3392 3.640498 CTCAGACTATCAGCATCCCTTCA 59.360 47.826 0.00 0.00 0.00 3.02
2668 3393 3.554752 GCTCAGACTATCAGCATCCCTTC 60.555 52.174 0.00 0.00 33.06 3.46
2669 3394 2.368221 GCTCAGACTATCAGCATCCCTT 59.632 50.000 0.00 0.00 33.06 3.95
2670 3395 1.969923 GCTCAGACTATCAGCATCCCT 59.030 52.381 0.00 0.00 33.06 4.20
2671 3396 1.001860 GGCTCAGACTATCAGCATCCC 59.998 57.143 3.39 0.00 34.62 3.85
2672 3397 1.969923 AGGCTCAGACTATCAGCATCC 59.030 52.381 0.00 0.00 34.62 3.51
2673 3398 4.862902 TTAGGCTCAGACTATCAGCATC 57.137 45.455 0.00 0.00 34.62 3.91
2674 3399 5.186797 GGTATTAGGCTCAGACTATCAGCAT 59.813 44.000 0.00 0.00 34.62 3.79
2675 3400 4.524714 GGTATTAGGCTCAGACTATCAGCA 59.475 45.833 0.00 0.00 34.62 4.41
2676 3401 4.524714 TGGTATTAGGCTCAGACTATCAGC 59.475 45.833 0.00 0.00 0.00 4.26
2677 3402 6.656632 TTGGTATTAGGCTCAGACTATCAG 57.343 41.667 0.00 0.00 0.00 2.90
2678 3403 6.382859 TGTTTGGTATTAGGCTCAGACTATCA 59.617 38.462 0.00 0.00 0.00 2.15
2679 3404 6.817184 TGTTTGGTATTAGGCTCAGACTATC 58.183 40.000 0.00 0.00 0.00 2.08
2680 3405 6.611642 TCTGTTTGGTATTAGGCTCAGACTAT 59.388 38.462 0.00 0.00 0.00 2.12
2681 3406 5.955959 TCTGTTTGGTATTAGGCTCAGACTA 59.044 40.000 0.00 0.00 0.00 2.59
2682 3407 4.777896 TCTGTTTGGTATTAGGCTCAGACT 59.222 41.667 0.00 0.00 0.00 3.24
2683 3408 4.870991 GTCTGTTTGGTATTAGGCTCAGAC 59.129 45.833 10.25 10.25 41.85 3.51
2684 3409 4.081087 GGTCTGTTTGGTATTAGGCTCAGA 60.081 45.833 0.00 0.00 0.00 3.27
2685 3410 4.080863 AGGTCTGTTTGGTATTAGGCTCAG 60.081 45.833 0.00 0.00 0.00 3.35
2686 3411 3.844211 AGGTCTGTTTGGTATTAGGCTCA 59.156 43.478 0.00 0.00 0.00 4.26
2687 3412 4.443621 GAGGTCTGTTTGGTATTAGGCTC 58.556 47.826 0.00 0.00 0.00 4.70
2688 3413 3.118738 CGAGGTCTGTTTGGTATTAGGCT 60.119 47.826 0.00 0.00 0.00 4.58
2689 3414 3.195661 CGAGGTCTGTTTGGTATTAGGC 58.804 50.000 0.00 0.00 0.00 3.93
2690 3415 3.195661 GCGAGGTCTGTTTGGTATTAGG 58.804 50.000 0.00 0.00 0.00 2.69
2691 3416 3.857052 TGCGAGGTCTGTTTGGTATTAG 58.143 45.455 0.00 0.00 0.00 1.73
2692 3417 3.857052 CTGCGAGGTCTGTTTGGTATTA 58.143 45.455 0.00 0.00 0.00 0.98
2693 3418 2.699954 CTGCGAGGTCTGTTTGGTATT 58.300 47.619 0.00 0.00 0.00 1.89
2694 3419 1.676014 GCTGCGAGGTCTGTTTGGTAT 60.676 52.381 0.00 0.00 0.00 2.73
2695 3420 0.320421 GCTGCGAGGTCTGTTTGGTA 60.320 55.000 0.00 0.00 0.00 3.25
2696 3421 1.598130 GCTGCGAGGTCTGTTTGGT 60.598 57.895 0.00 0.00 0.00 3.67
2697 3422 2.328099 GGCTGCGAGGTCTGTTTGG 61.328 63.158 0.00 0.00 0.00 3.28
2698 3423 1.165907 TTGGCTGCGAGGTCTGTTTG 61.166 55.000 0.00 0.00 0.00 2.93
2699 3424 0.886490 CTTGGCTGCGAGGTCTGTTT 60.886 55.000 0.00 0.00 0.00 2.83
2700 3425 1.302033 CTTGGCTGCGAGGTCTGTT 60.302 57.895 0.00 0.00 0.00 3.16
2701 3426 2.345244 CTTGGCTGCGAGGTCTGT 59.655 61.111 0.00 0.00 0.00 3.41
2702 3427 1.739562 GACTTGGCTGCGAGGTCTG 60.740 63.158 17.37 0.00 0.00 3.51
2703 3428 0.612174 TAGACTTGGCTGCGAGGTCT 60.612 55.000 26.93 26.93 39.95 3.85
2704 3429 0.246635 TTAGACTTGGCTGCGAGGTC 59.753 55.000 17.03 17.03 0.00 3.85
2705 3430 0.037232 GTTAGACTTGGCTGCGAGGT 60.037 55.000 0.00 0.00 0.00 3.85
2706 3431 0.037326 TGTTAGACTTGGCTGCGAGG 60.037 55.000 6.61 0.00 0.00 4.63
2707 3432 2.015736 ATGTTAGACTTGGCTGCGAG 57.984 50.000 0.00 0.00 0.00 5.03
2708 3433 2.472695 AATGTTAGACTTGGCTGCGA 57.527 45.000 0.00 0.00 0.00 5.10
2709 3434 2.483877 TGAAATGTTAGACTTGGCTGCG 59.516 45.455 0.00 0.00 0.00 5.18
2710 3435 3.753272 TCTGAAATGTTAGACTTGGCTGC 59.247 43.478 0.00 0.00 0.00 5.25
2711 3436 4.154918 GGTCTGAAATGTTAGACTTGGCTG 59.845 45.833 7.68 0.00 42.24 4.85
2712 3437 4.042187 AGGTCTGAAATGTTAGACTTGGCT 59.958 41.667 7.68 0.00 42.24 4.75
2713 3438 4.154918 CAGGTCTGAAATGTTAGACTTGGC 59.845 45.833 11.04 0.00 43.33 4.52
2714 3439 5.551233 TCAGGTCTGAAATGTTAGACTTGG 58.449 41.667 16.84 4.50 45.58 3.61
2715 3440 5.641209 CCTCAGGTCTGAAATGTTAGACTTG 59.359 44.000 12.32 12.32 46.38 3.16
2716 3441 5.799213 CCTCAGGTCTGAAATGTTAGACTT 58.201 41.667 7.68 0.00 42.24 3.01
2717 3442 4.323104 GCCTCAGGTCTGAAATGTTAGACT 60.323 45.833 7.68 0.00 42.24 3.24
2718 3443 3.935828 GCCTCAGGTCTGAAATGTTAGAC 59.064 47.826 0.00 0.00 41.95 2.59
2719 3444 3.055094 GGCCTCAGGTCTGAAATGTTAGA 60.055 47.826 0.00 0.00 39.39 2.10
2720 3445 3.274288 GGCCTCAGGTCTGAAATGTTAG 58.726 50.000 0.00 0.00 39.39 2.34
2721 3446 2.026262 GGGCCTCAGGTCTGAAATGTTA 60.026 50.000 0.84 0.00 39.39 2.41
2722 3447 1.272147 GGGCCTCAGGTCTGAAATGTT 60.272 52.381 0.84 0.00 39.39 2.71
2723 3448 0.329596 GGGCCTCAGGTCTGAAATGT 59.670 55.000 0.84 0.00 39.39 2.71
2724 3449 0.394899 GGGGCCTCAGGTCTGAAATG 60.395 60.000 0.84 0.00 39.39 2.32
2725 3450 0.846427 TGGGGCCTCAGGTCTGAAAT 60.846 55.000 0.00 0.00 39.39 2.17
2726 3451 1.065410 TTGGGGCCTCAGGTCTGAAA 61.065 55.000 4.89 0.00 39.39 2.69
2727 3452 1.463214 TTGGGGCCTCAGGTCTGAA 60.463 57.895 4.89 0.00 39.39 3.02
2728 3453 2.206900 TTGGGGCCTCAGGTCTGA 59.793 61.111 4.89 0.45 38.06 3.27
2729 3454 0.909610 TAGTTGGGGCCTCAGGTCTG 60.910 60.000 4.89 0.00 0.00 3.51
2730 3455 0.178873 TTAGTTGGGGCCTCAGGTCT 60.179 55.000 4.89 8.84 0.00 3.85
2731 3456 0.253327 CTTAGTTGGGGCCTCAGGTC 59.747 60.000 4.89 0.28 0.00 3.85
2732 3457 1.853250 GCTTAGTTGGGGCCTCAGGT 61.853 60.000 4.89 0.00 0.00 4.00
2733 3458 1.077429 GCTTAGTTGGGGCCTCAGG 60.077 63.158 4.89 0.00 0.00 3.86
2734 3459 1.077429 GGCTTAGTTGGGGCCTCAG 60.077 63.158 4.89 0.00 42.31 3.35
2735 3460 1.850289 TGGCTTAGTTGGGGCCTCA 60.850 57.895 0.00 0.00 45.45 3.86
2736 3461 1.378646 GTGGCTTAGTTGGGGCCTC 60.379 63.158 0.84 0.00 45.45 4.70
2737 3462 1.435346 AAGTGGCTTAGTTGGGGCCT 61.435 55.000 0.84 0.00 45.45 5.19
2738 3463 0.330267 TAAGTGGCTTAGTTGGGGCC 59.670 55.000 0.00 0.00 45.45 5.80
2739 3464 1.460504 GTAAGTGGCTTAGTTGGGGC 58.539 55.000 0.00 0.00 0.00 5.80
2740 3465 1.677820 CGGTAAGTGGCTTAGTTGGGG 60.678 57.143 0.00 0.00 0.00 4.96
2741 3466 1.276989 TCGGTAAGTGGCTTAGTTGGG 59.723 52.381 0.00 0.00 0.00 4.12
2742 3467 2.028385 ACTCGGTAAGTGGCTTAGTTGG 60.028 50.000 0.00 0.00 36.65 3.77
2743 3468 3.314541 ACTCGGTAAGTGGCTTAGTTG 57.685 47.619 0.00 0.00 36.65 3.16
2744 3469 4.679905 GCATACTCGGTAAGTGGCTTAGTT 60.680 45.833 0.00 0.00 39.11 2.24
2745 3470 3.181478 GCATACTCGGTAAGTGGCTTAGT 60.181 47.826 0.00 0.00 39.11 2.24
2746 3471 3.381949 GCATACTCGGTAAGTGGCTTAG 58.618 50.000 0.00 0.00 39.11 2.18
2747 3472 2.223641 CGCATACTCGGTAAGTGGCTTA 60.224 50.000 0.00 0.00 39.11 3.09
2748 3473 1.470979 CGCATACTCGGTAAGTGGCTT 60.471 52.381 0.00 0.00 39.11 4.35
2749 3474 0.102481 CGCATACTCGGTAAGTGGCT 59.898 55.000 0.00 0.00 39.11 4.75
2750 3475 0.874607 CCGCATACTCGGTAAGTGGC 60.875 60.000 6.12 0.55 44.18 5.01
2751 3476 3.267900 CCGCATACTCGGTAAGTGG 57.732 57.895 5.06 5.06 44.18 4.00
2759 3484 2.452813 GGTGTGTGCCGCATACTCG 61.453 63.158 19.48 0.00 38.93 4.18
2760 3485 2.452813 CGGTGTGTGCCGCATACTC 61.453 63.158 19.48 15.84 45.47 2.59
2761 3486 2.434185 CGGTGTGTGCCGCATACT 60.434 61.111 19.48 0.00 45.47 2.12
2770 3495 3.800685 TTCGCTGGACCGGTGTGTG 62.801 63.158 14.63 8.65 0.00 3.82
2771 3496 3.542676 TTCGCTGGACCGGTGTGT 61.543 61.111 14.63 0.00 0.00 3.72
2772 3497 3.041940 GTTCGCTGGACCGGTGTG 61.042 66.667 14.63 4.33 0.00 3.82
2773 3498 3.542676 TGTTCGCTGGACCGGTGT 61.543 61.111 14.63 0.00 0.00 4.16
2774 3499 3.041940 GTGTTCGCTGGACCGGTG 61.042 66.667 14.63 7.62 0.00 4.94
2775 3500 3.542676 TGTGTTCGCTGGACCGGT 61.543 61.111 6.92 6.92 0.00 5.28
2776 3501 3.041940 GTGTGTTCGCTGGACCGG 61.042 66.667 0.00 0.00 0.00 5.28
2777 3502 1.433053 TTTGTGTGTTCGCTGGACCG 61.433 55.000 0.00 0.00 0.00 4.79
2778 3503 0.307760 CTTTGTGTGTTCGCTGGACC 59.692 55.000 0.00 0.00 0.00 4.46
2779 3504 0.307760 CCTTTGTGTGTTCGCTGGAC 59.692 55.000 0.00 0.00 0.00 4.02
2780 3505 1.444119 GCCTTTGTGTGTTCGCTGGA 61.444 55.000 0.00 0.00 0.00 3.86
2781 3506 1.008538 GCCTTTGTGTGTTCGCTGG 60.009 57.895 0.00 0.00 0.00 4.85
2782 3507 1.008538 GGCCTTTGTGTGTTCGCTG 60.009 57.895 0.00 0.00 0.00 5.18
2783 3508 2.542907 CGGCCTTTGTGTGTTCGCT 61.543 57.895 0.00 0.00 0.00 4.93
2784 3509 2.051345 CGGCCTTTGTGTGTTCGC 60.051 61.111 0.00 0.00 0.00 4.70
2785 3510 2.051345 GCGGCCTTTGTGTGTTCG 60.051 61.111 0.00 0.00 0.00 3.95
2786 3511 1.299089 GTGCGGCCTTTGTGTGTTC 60.299 57.895 0.00 0.00 0.00 3.18
2787 3512 2.781158 GGTGCGGCCTTTGTGTGTT 61.781 57.895 0.00 0.00 0.00 3.32
2788 3513 3.216292 GGTGCGGCCTTTGTGTGT 61.216 61.111 0.00 0.00 0.00 3.72
2789 3514 4.326766 CGGTGCGGCCTTTGTGTG 62.327 66.667 0.00 0.00 34.25 3.82
2801 3526 2.755469 ATGGATTGGTGGCGGTGC 60.755 61.111 0.00 0.00 0.00 5.01
2802 3527 0.680921 AAGATGGATTGGTGGCGGTG 60.681 55.000 0.00 0.00 0.00 4.94
2803 3528 0.394352 GAAGATGGATTGGTGGCGGT 60.394 55.000 0.00 0.00 0.00 5.68
2804 3529 0.394216 TGAAGATGGATTGGTGGCGG 60.394 55.000 0.00 0.00 0.00 6.13
2805 3530 1.019673 CTGAAGATGGATTGGTGGCG 58.980 55.000 0.00 0.00 0.00 5.69
2806 3531 2.295885 CTCTGAAGATGGATTGGTGGC 58.704 52.381 0.00 0.00 0.00 5.01
2807 3532 2.092538 AGCTCTGAAGATGGATTGGTGG 60.093 50.000 0.00 0.00 0.00 4.61
2808 3533 2.943690 CAGCTCTGAAGATGGATTGGTG 59.056 50.000 0.00 0.00 35.22 4.17
2809 3534 2.575279 ACAGCTCTGAAGATGGATTGGT 59.425 45.455 3.60 0.00 43.33 3.67
2810 3535 3.278668 ACAGCTCTGAAGATGGATTGG 57.721 47.619 3.60 0.00 43.33 3.16
2811 3536 4.809958 CAGTACAGCTCTGAAGATGGATTG 59.190 45.833 3.60 0.00 43.33 2.67
2812 3537 4.713814 TCAGTACAGCTCTGAAGATGGATT 59.286 41.667 3.60 0.00 43.33 3.01
2813 3538 4.099266 GTCAGTACAGCTCTGAAGATGGAT 59.901 45.833 5.25 0.00 43.33 3.41
2814 3539 3.445450 GTCAGTACAGCTCTGAAGATGGA 59.555 47.826 5.25 0.00 43.33 3.41
2815 3540 3.733380 CGTCAGTACAGCTCTGAAGATGG 60.733 52.174 10.14 0.00 43.33 3.51
2816 3541 3.433709 CGTCAGTACAGCTCTGAAGATG 58.566 50.000 10.14 0.00 44.61 2.90
2817 3542 2.159310 GCGTCAGTACAGCTCTGAAGAT 60.159 50.000 17.19 0.00 42.42 2.40
2818 3543 1.200252 GCGTCAGTACAGCTCTGAAGA 59.800 52.381 17.19 0.00 42.42 2.87
2819 3544 1.068264 TGCGTCAGTACAGCTCTGAAG 60.068 52.381 11.02 11.02 42.42 3.02
2820 3545 0.958822 TGCGTCAGTACAGCTCTGAA 59.041 50.000 5.25 0.00 42.42 3.02
2821 3546 1.133216 GATGCGTCAGTACAGCTCTGA 59.867 52.381 0.00 0.00 39.25 3.27
2822 3547 1.135286 TGATGCGTCAGTACAGCTCTG 60.135 52.381 3.97 0.00 0.00 3.35
2823 3548 1.177401 TGATGCGTCAGTACAGCTCT 58.823 50.000 3.97 0.00 0.00 4.09
2824 3549 1.656095 GTTGATGCGTCAGTACAGCTC 59.344 52.381 8.93 0.00 35.39 4.09
2825 3550 1.673033 GGTTGATGCGTCAGTACAGCT 60.673 52.381 8.93 0.00 35.39 4.24
2826 3551 0.721718 GGTTGATGCGTCAGTACAGC 59.278 55.000 8.93 0.09 35.39 4.40
2827 3552 2.370281 AGGTTGATGCGTCAGTACAG 57.630 50.000 8.93 0.00 35.39 2.74
2828 3553 2.412870 CAAGGTTGATGCGTCAGTACA 58.587 47.619 8.93 0.00 35.39 2.90
2829 3554 1.128692 GCAAGGTTGATGCGTCAGTAC 59.871 52.381 8.93 5.47 35.39 2.73
2830 3555 1.438651 GCAAGGTTGATGCGTCAGTA 58.561 50.000 8.93 0.00 35.39 2.74
2831 3556 1.237285 GGCAAGGTTGATGCGTCAGT 61.237 55.000 8.93 0.00 44.75 3.41
2832 3557 0.957395 AGGCAAGGTTGATGCGTCAG 60.957 55.000 8.93 0.00 44.75 3.51
2833 3558 1.073025 AGGCAAGGTTGATGCGTCA 59.927 52.632 3.97 3.97 44.75 4.35
2834 3559 1.503542 CAGGCAAGGTTGATGCGTC 59.496 57.895 0.00 0.00 44.75 5.19
2835 3560 1.973281 CCAGGCAAGGTTGATGCGT 60.973 57.895 0.00 0.00 44.75 5.24
2836 3561 1.926511 GACCAGGCAAGGTTGATGCG 61.927 60.000 3.06 0.00 43.38 4.73
2837 3562 0.610232 AGACCAGGCAAGGTTGATGC 60.610 55.000 3.06 0.00 43.38 3.91
2838 3563 2.636830 CTAGACCAGGCAAGGTTGATG 58.363 52.381 3.06 0.00 43.38 3.07
2839 3564 1.065126 GCTAGACCAGGCAAGGTTGAT 60.065 52.381 3.06 0.00 43.38 2.57
2840 3565 0.324943 GCTAGACCAGGCAAGGTTGA 59.675 55.000 3.06 0.00 43.38 3.18
2841 3566 0.326264 AGCTAGACCAGGCAAGGTTG 59.674 55.000 3.06 0.00 43.38 3.77
2842 3567 0.326264 CAGCTAGACCAGGCAAGGTT 59.674 55.000 3.06 0.00 43.38 3.50
2843 3568 1.986413 CAGCTAGACCAGGCAAGGT 59.014 57.895 0.90 0.90 46.82 3.50
2844 3569 1.451028 GCAGCTAGACCAGGCAAGG 60.451 63.158 0.00 0.00 0.00 3.61
2845 3570 1.451028 GGCAGCTAGACCAGGCAAG 60.451 63.158 0.00 0.00 0.00 4.01
2846 3571 2.671070 GGCAGCTAGACCAGGCAA 59.329 61.111 0.00 0.00 0.00 4.52
2847 3572 3.774528 CGGCAGCTAGACCAGGCA 61.775 66.667 0.00 0.00 0.00 4.75
2848 3573 2.356818 CTACGGCAGCTAGACCAGGC 62.357 65.000 0.00 0.00 0.00 4.85
2849 3574 0.752009 TCTACGGCAGCTAGACCAGG 60.752 60.000 0.00 0.00 0.00 4.45
2850 3575 0.382515 GTCTACGGCAGCTAGACCAG 59.617 60.000 9.70 0.00 35.85 4.00
2851 3576 1.374343 CGTCTACGGCAGCTAGACCA 61.374 60.000 13.61 0.00 37.79 4.02
2852 3577 1.355916 CGTCTACGGCAGCTAGACC 59.644 63.158 13.61 0.00 37.79 3.85
2853 3578 1.298488 GCGTCTACGGCAGCTAGAC 60.298 63.158 10.52 10.52 40.23 2.59
2854 3579 3.108343 GCGTCTACGGCAGCTAGA 58.892 61.111 4.49 0.00 40.23 2.43
2862 3587 3.740397 TCGTGGTGGCGTCTACGG 61.740 66.667 15.28 1.86 41.35 4.02
2863 3588 2.503375 GTCGTGGTGGCGTCTACG 60.503 66.667 10.86 10.86 42.13 3.51
2864 3589 2.503375 CGTCGTGGTGGCGTCTAC 60.503 66.667 0.00 0.00 0.00 2.59
2865 3590 4.409218 GCGTCGTGGTGGCGTCTA 62.409 66.667 0.00 0.00 0.00 2.59
2871 3596 3.800685 TTGTCTGGCGTCGTGGTGG 62.801 63.158 0.00 0.00 0.00 4.61
2872 3597 2.279851 TTGTCTGGCGTCGTGGTG 60.280 61.111 0.00 0.00 0.00 4.17
2873 3598 2.279918 GTTGTCTGGCGTCGTGGT 60.280 61.111 0.00 0.00 0.00 4.16
2874 3599 3.403057 CGTTGTCTGGCGTCGTGG 61.403 66.667 0.00 0.00 0.00 4.94
2875 3600 4.059459 GCGTTGTCTGGCGTCGTG 62.059 66.667 0.00 0.00 0.00 4.35
2878 3603 3.712881 GTGGCGTTGTCTGGCGTC 61.713 66.667 0.00 0.00 34.03 5.19
2881 3606 2.672996 ATGGTGGCGTTGTCTGGC 60.673 61.111 0.00 0.00 0.00 4.85
2882 3607 2.040544 GGATGGTGGCGTTGTCTGG 61.041 63.158 0.00 0.00 0.00 3.86
2883 3608 0.249120 TAGGATGGTGGCGTTGTCTG 59.751 55.000 0.00 0.00 0.00 3.51
2884 3609 0.249398 GTAGGATGGTGGCGTTGTCT 59.751 55.000 0.00 0.00 0.00 3.41
2885 3610 1.082117 CGTAGGATGGTGGCGTTGTC 61.082 60.000 0.00 0.00 0.00 3.18
2886 3611 1.079405 CGTAGGATGGTGGCGTTGT 60.079 57.895 0.00 0.00 0.00 3.32
2887 3612 2.461110 GCGTAGGATGGTGGCGTTG 61.461 63.158 0.00 0.00 0.00 4.10
2888 3613 2.125269 GCGTAGGATGGTGGCGTT 60.125 61.111 0.00 0.00 0.00 4.84
2889 3614 3.075005 AGCGTAGGATGGTGGCGT 61.075 61.111 0.00 0.00 0.00 5.68
2890 3615 2.279517 GAGCGTAGGATGGTGGCG 60.280 66.667 0.00 0.00 0.00 5.69
2891 3616 2.279517 CGAGCGTAGGATGGTGGC 60.280 66.667 0.00 0.00 0.00 5.01
2892 3617 1.065928 GACGAGCGTAGGATGGTGG 59.934 63.158 0.00 0.00 0.00 4.61
2893 3618 1.065928 GGACGAGCGTAGGATGGTG 59.934 63.158 0.00 0.00 0.00 4.17
2894 3619 0.755698 ATGGACGAGCGTAGGATGGT 60.756 55.000 0.00 0.00 0.00 3.55
2895 3620 0.039074 GATGGACGAGCGTAGGATGG 60.039 60.000 0.00 0.00 0.00 3.51
2896 3621 0.668535 TGATGGACGAGCGTAGGATG 59.331 55.000 0.00 0.00 0.00 3.51
2897 3622 1.067212 GTTGATGGACGAGCGTAGGAT 59.933 52.381 0.00 0.00 0.00 3.24
2898 3623 0.454600 GTTGATGGACGAGCGTAGGA 59.545 55.000 0.00 0.00 0.00 2.94
2899 3624 0.172578 TGTTGATGGACGAGCGTAGG 59.827 55.000 0.00 0.00 0.00 3.18
2900 3625 1.269166 GTGTTGATGGACGAGCGTAG 58.731 55.000 0.00 0.00 0.00 3.51
2901 3626 0.599060 TGTGTTGATGGACGAGCGTA 59.401 50.000 0.00 0.00 0.00 4.42
2902 3627 0.944311 GTGTGTTGATGGACGAGCGT 60.944 55.000 0.00 0.00 0.00 5.07
2903 3628 0.943835 TGTGTGTTGATGGACGAGCG 60.944 55.000 0.00 0.00 0.00 5.03
2904 3629 0.512952 GTGTGTGTTGATGGACGAGC 59.487 55.000 0.00 0.00 0.00 5.03
2905 3630 1.148310 GGTGTGTGTTGATGGACGAG 58.852 55.000 0.00 0.00 0.00 4.18
2906 3631 0.250124 GGGTGTGTGTTGATGGACGA 60.250 55.000 0.00 0.00 0.00 4.20
2907 3632 0.533978 TGGGTGTGTGTTGATGGACG 60.534 55.000 0.00 0.00 0.00 4.79
2908 3633 1.238439 CTGGGTGTGTGTTGATGGAC 58.762 55.000 0.00 0.00 0.00 4.02
2909 3634 0.537143 GCTGGGTGTGTGTTGATGGA 60.537 55.000 0.00 0.00 0.00 3.41
2910 3635 0.822944 TGCTGGGTGTGTGTTGATGG 60.823 55.000 0.00 0.00 0.00 3.51
2911 3636 0.594602 CTGCTGGGTGTGTGTTGATG 59.405 55.000 0.00 0.00 0.00 3.07
2912 3637 1.174712 GCTGCTGGGTGTGTGTTGAT 61.175 55.000 0.00 0.00 0.00 2.57
2913 3638 1.823470 GCTGCTGGGTGTGTGTTGA 60.823 57.895 0.00 0.00 0.00 3.18
2914 3639 2.723746 GCTGCTGGGTGTGTGTTG 59.276 61.111 0.00 0.00 0.00 3.33
2915 3640 2.884997 TTCGCTGCTGGGTGTGTGTT 62.885 55.000 7.52 0.00 0.00 3.32
2916 3641 2.884997 TTTCGCTGCTGGGTGTGTGT 62.885 55.000 7.52 0.00 0.00 3.72
2917 3642 2.186160 TTTCGCTGCTGGGTGTGTG 61.186 57.895 7.52 0.00 0.00 3.82
2918 3643 2.186826 GTTTCGCTGCTGGGTGTGT 61.187 57.895 7.52 0.00 0.00 3.72
2919 3644 2.639286 GTTTCGCTGCTGGGTGTG 59.361 61.111 7.52 0.00 0.00 3.82
2920 3645 2.594592 GGTTTCGCTGCTGGGTGT 60.595 61.111 7.52 0.00 0.00 4.16
2921 3646 3.365265 GGGTTTCGCTGCTGGGTG 61.365 66.667 7.52 0.00 0.00 4.61
2922 3647 4.660938 GGGGTTTCGCTGCTGGGT 62.661 66.667 7.52 0.00 0.00 4.51
2931 3656 2.040544 ATGAAGCAGCGGGGTTTCG 61.041 57.895 0.00 0.00 37.33 3.46
2932 3657 1.508088 CATGAAGCAGCGGGGTTTC 59.492 57.895 0.00 0.00 37.33 2.78
2933 3658 2.639327 GCATGAAGCAGCGGGGTTT 61.639 57.895 0.00 0.00 44.79 3.27
2934 3659 3.064324 GCATGAAGCAGCGGGGTT 61.064 61.111 0.00 0.00 44.79 4.11
2943 3668 1.153958 GGTTTCAGCGGCATGAAGC 60.154 57.895 15.30 15.30 40.16 3.86
2944 3669 1.508088 GGGTTTCAGCGGCATGAAG 59.492 57.895 1.45 0.00 40.16 3.02
2945 3670 2.331893 CGGGTTTCAGCGGCATGAA 61.332 57.895 1.45 6.76 37.41 2.57
2946 3671 2.745884 CGGGTTTCAGCGGCATGA 60.746 61.111 1.45 0.05 0.00 3.07
2947 3672 4.481112 GCGGGTTTCAGCGGCATG 62.481 66.667 1.45 0.00 40.87 4.06
2952 3677 4.084888 GAACGGCGGGTTTCAGCG 62.085 66.667 13.24 0.00 39.50 5.18
2953 3678 2.668550 AGAACGGCGGGTTTCAGC 60.669 61.111 13.24 0.00 39.50 4.26
2954 3679 1.004918 AGAGAACGGCGGGTTTCAG 60.005 57.895 13.24 0.00 39.50 3.02
2955 3680 1.005394 GAGAGAACGGCGGGTTTCA 60.005 57.895 13.24 0.00 39.50 2.69
2956 3681 0.601841 TTGAGAGAACGGCGGGTTTC 60.602 55.000 13.24 6.20 39.50 2.78
2957 3682 0.883370 GTTGAGAGAACGGCGGGTTT 60.883 55.000 13.24 0.00 39.50 3.27
2958 3683 1.301479 GTTGAGAGAACGGCGGGTT 60.301 57.895 13.24 0.00 42.96 4.11
2959 3684 2.342648 GTTGAGAGAACGGCGGGT 59.657 61.111 13.24 0.00 0.00 5.28
2960 3685 2.809601 CGTTGAGAGAACGGCGGG 60.810 66.667 13.24 0.00 39.73 6.13
2961 3686 2.049433 ACGTTGAGAGAACGGCGG 60.049 61.111 13.24 0.00 46.86 6.13
2962 3687 1.606350 GACACGTTGAGAGAACGGCG 61.606 60.000 4.80 4.80 46.86 6.46
2963 3688 0.318784 AGACACGTTGAGAGAACGGC 60.319 55.000 11.27 1.38 46.86 5.68
2964 3689 1.001706 TCAGACACGTTGAGAGAACGG 60.002 52.381 11.27 3.59 46.86 4.44
2966 3691 3.917380 CAGATCAGACACGTTGAGAGAAC 59.083 47.826 0.00 0.00 0.00 3.01
2967 3692 3.057245 CCAGATCAGACACGTTGAGAGAA 60.057 47.826 0.00 0.00 0.00 2.87
2968 3693 2.489722 CCAGATCAGACACGTTGAGAGA 59.510 50.000 0.00 0.00 0.00 3.10
2969 3694 2.416566 CCCAGATCAGACACGTTGAGAG 60.417 54.545 0.00 0.00 0.00 3.20
2970 3695 1.546029 CCCAGATCAGACACGTTGAGA 59.454 52.381 0.00 0.00 0.00 3.27
2971 3696 1.273606 ACCCAGATCAGACACGTTGAG 59.726 52.381 0.00 0.00 0.00 3.02
2972 3697 1.338107 ACCCAGATCAGACACGTTGA 58.662 50.000 0.00 0.00 0.00 3.18
2973 3698 1.800586 CAACCCAGATCAGACACGTTG 59.199 52.381 0.00 0.00 0.00 4.10
2974 3699 1.270839 CCAACCCAGATCAGACACGTT 60.271 52.381 0.00 0.00 0.00 3.99
2975 3700 0.321671 CCAACCCAGATCAGACACGT 59.678 55.000 0.00 0.00 0.00 4.49
2976 3701 1.021390 GCCAACCCAGATCAGACACG 61.021 60.000 0.00 0.00 0.00 4.49
2977 3702 0.326264 AGCCAACCCAGATCAGACAC 59.674 55.000 0.00 0.00 0.00 3.67
2978 3703 1.003580 GAAGCCAACCCAGATCAGACA 59.996 52.381 0.00 0.00 0.00 3.41
2979 3704 1.743996 GAAGCCAACCCAGATCAGAC 58.256 55.000 0.00 0.00 0.00 3.51
2980 3705 0.250234 CGAAGCCAACCCAGATCAGA 59.750 55.000 0.00 0.00 0.00 3.27
2981 3706 0.745845 CCGAAGCCAACCCAGATCAG 60.746 60.000 0.00 0.00 0.00 2.90
2982 3707 1.299648 CCGAAGCCAACCCAGATCA 59.700 57.895 0.00 0.00 0.00 2.92
2983 3708 2.115291 GCCGAAGCCAACCCAGATC 61.115 63.158 0.00 0.00 0.00 2.75
2984 3709 2.044946 GCCGAAGCCAACCCAGAT 60.045 61.111 0.00 0.00 0.00 2.90
2996 3721 2.429930 CCAGTCAGTTGGGCCGAA 59.570 61.111 0.00 0.00 34.46 4.30
3030 3755 7.701539 ATACATTGTTCTGTGATAAAGCCAA 57.298 32.000 0.00 0.00 0.00 4.52
3031 3756 8.978874 ATATACATTGTTCTGTGATAAAGCCA 57.021 30.769 0.00 0.00 0.00 4.75
3051 3776 8.088365 GGTGGCATTTTTCCCTTCATAATATAC 58.912 37.037 0.00 0.00 0.00 1.47
3066 3792 6.384603 AGGGATATAATCAGGTGGCATTTTT 58.615 36.000 0.00 0.00 0.00 1.94
3067 3793 5.969086 AGGGATATAATCAGGTGGCATTTT 58.031 37.500 0.00 0.00 0.00 1.82
3082 3808 6.706270 GCTGATTGAAAGACGAAAGGGATATA 59.294 38.462 0.00 0.00 0.00 0.86
3084 3810 4.876107 GCTGATTGAAAGACGAAAGGGATA 59.124 41.667 0.00 0.00 0.00 2.59
3092 3818 2.224281 ACACCTGCTGATTGAAAGACGA 60.224 45.455 0.00 0.00 0.00 4.20
3110 3836 3.179830 CGCCAGTACACATAGAGAACAC 58.820 50.000 0.00 0.00 0.00 3.32
3119 3845 1.375908 CTGTGCCGCCAGTACACAT 60.376 57.895 0.00 0.00 42.94 3.21
3146 4052 1.215382 CAGTGCCGTGCTAGTGCTA 59.785 57.895 0.00 0.00 40.48 3.49
3193 4105 2.033141 TGCTGCTCTGTTCCTGCC 59.967 61.111 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.