Multiple sequence alignment - TraesCS4D01G260600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G260600 chr4D 100.000 3255 0 0 1 3255 430880047 430876793 0.000000e+00 6011.0
1 TraesCS4D01G260600 chr4D 95.489 133 5 1 3009 3141 456687302 456687171 9.150000e-51 211.0
2 TraesCS4D01G260600 chr4D 94.792 96 5 0 3160 3255 452813708 452813803 2.020000e-32 150.0
3 TraesCS4D01G260600 chr4D 86.992 123 6 9 2991 3109 417398152 417398268 2.640000e-26 130.0
4 TraesCS4D01G260600 chr4D 96.296 54 0 2 3090 3141 100347200 100347253 1.610000e-13 87.9
5 TraesCS4D01G260600 chr4D 97.872 47 1 0 3095 3141 477366768 477366814 7.490000e-12 82.4
6 TraesCS4D01G260600 chr4D 100.000 44 0 0 3098 3141 509223831 509223788 7.490000e-12 82.4
7 TraesCS4D01G260600 chr4D 92.727 55 2 2 3087 3141 483554895 483554947 9.680000e-11 78.7
8 TraesCS4D01G260600 chr4D 95.122 41 1 1 554 593 430880435 430880475 2.710000e-06 63.9
9 TraesCS4D01G260600 chr4A 94.404 1930 73 17 589 2496 32593956 32592040 0.000000e+00 2933.0
10 TraesCS4D01G260600 chr4A 98.958 96 1 0 3160 3255 68458812 68458717 4.320000e-39 172.0
11 TraesCS4D01G260600 chr4A 90.000 110 11 0 2585 2694 32591677 32591568 3.390000e-30 143.0
12 TraesCS4D01G260600 chr4B 92.797 1916 68 29 589 2480 529357571 529355702 0.000000e+00 2710.0
13 TraesCS4D01G260600 chr4B 88.302 265 15 10 2891 3141 22553956 22554218 1.470000e-78 303.0
14 TraesCS4D01G260600 chr6D 97.302 556 11 3 1 556 162297444 162297995 0.000000e+00 941.0
15 TraesCS4D01G260600 chr6D 89.971 349 13 13 1 329 446510336 446509990 6.450000e-117 431.0
16 TraesCS4D01G260600 chr6D 100.000 36 0 0 554 589 162298059 162298094 2.100000e-07 67.6
17 TraesCS4D01G260600 chr6D 100.000 34 0 0 554 587 162297049 162297016 2.710000e-06 63.9
18 TraesCS4D01G260600 chr2B 89.155 627 66 2 1637 2261 3738781 3738155 0.000000e+00 780.0
19 TraesCS4D01G260600 chr2B 89.155 627 66 2 1637 2261 3825306 3824680 0.000000e+00 780.0
20 TraesCS4D01G260600 chr2B 88.995 627 67 2 1637 2261 4117666 4117040 0.000000e+00 774.0
21 TraesCS4D01G260600 chr2B 84.375 128 20 0 429 556 8013457 8013584 3.410000e-25 126.0
22 TraesCS4D01G260600 chr2B 84.375 128 20 0 429 556 8177549 8177676 3.410000e-25 126.0
23 TraesCS4D01G260600 chr2D 88.710 620 68 2 1644 2261 7667433 7666814 0.000000e+00 756.0
24 TraesCS4D01G260600 chr2D 86.757 589 43 13 1 556 50040209 50040795 9.920000e-175 623.0
25 TraesCS4D01G260600 chr2D 90.000 240 19 5 2723 2959 592102272 592102509 4.080000e-79 305.0
26 TraesCS4D01G260600 chr2D 89.583 144 15 0 1162 1305 7667712 7667569 1.990000e-42 183.0
27 TraesCS4D01G260600 chr2D 94.872 39 2 0 554 592 592640986 592640948 9.750000e-06 62.1
28 TraesCS4D01G260600 chr6B 87.701 561 32 14 31 555 5067757 5067198 1.280000e-173 619.0
29 TraesCS4D01G260600 chr6B 85.714 399 21 7 193 555 2795706 2795308 3.940000e-104 388.0
30 TraesCS4D01G260600 chr6B 97.917 96 2 0 3160 3255 131683398 131683303 2.010000e-37 167.0
31 TraesCS4D01G260600 chr6B 91.667 96 8 0 3160 3255 641872021 641871926 2.040000e-27 134.0
32 TraesCS4D01G260600 chr6B 87.288 118 13 2 440 556 673342423 673342539 2.040000e-27 134.0
33 TraesCS4D01G260600 chr5D 88.771 472 22 2 2690 3141 409539990 409539530 1.710000e-152 549.0
34 TraesCS4D01G260600 chr5D 82.332 566 58 20 1 556 505362785 505363318 1.380000e-123 453.0
35 TraesCS4D01G260600 chr5D 77.917 557 103 18 1661 2207 134479179 134478633 2.420000e-86 329.0
36 TraesCS4D01G260600 chr5D 90.079 252 22 3 2691 2940 522063906 522063656 1.130000e-84 324.0
37 TraesCS4D01G260600 chr5D 81.818 176 7 10 2946 3098 496306998 496307171 1.230000e-24 124.0
38 TraesCS4D01G260600 chr5D 92.727 55 2 2 3087 3141 559401342 559401394 9.680000e-11 78.7
39 TraesCS4D01G260600 chr5D 77.143 105 23 1 2585 2689 328432545 328432648 3.510000e-05 60.2
40 TraesCS4D01G260600 chr1B 83.658 514 50 13 76 556 142796498 142795986 1.380000e-123 453.0
41 TraesCS4D01G260600 chr1B 87.352 253 31 1 1 252 606188563 606188311 4.110000e-74 289.0
42 TraesCS4D01G260600 chr1B 98.958 96 1 0 3160 3255 23989335 23989430 4.320000e-39 172.0
43 TraesCS4D01G260600 chr1B 98.958 96 1 0 3160 3255 24091328 24091233 4.320000e-39 172.0
44 TraesCS4D01G260600 chr1B 97.368 38 1 0 554 591 679367142 679367179 7.540000e-07 65.8
45 TraesCS4D01G260600 chr1A 86.339 366 27 13 1 345 491776343 491775980 8.520000e-101 377.0
46 TraesCS4D01G260600 chr1A 100.000 34 0 0 554 587 491776737 491776770 2.710000e-06 63.9
47 TraesCS4D01G260600 chr5A 78.674 558 97 20 1661 2207 158653228 158652682 5.170000e-93 351.0
48 TraesCS4D01G260600 chr5A 89.494 257 18 7 2743 2990 227135266 227135522 1.880000e-82 316.0
49 TraesCS4D01G260600 chr5A 84.039 307 31 13 2749 3041 606346241 606345939 2.470000e-71 279.0
50 TraesCS4D01G260600 chr5A 88.000 50 6 0 2585 2634 428155357 428155308 3.510000e-05 60.2
51 TraesCS4D01G260600 chr3D 90.800 250 18 4 2691 2937 276668634 276668881 2.420000e-86 329.0
52 TraesCS4D01G260600 chr3D 100.000 34 0 0 554 587 392750248 392750281 2.710000e-06 63.9
53 TraesCS4D01G260600 chrUn 91.416 233 17 2 324 556 342706070 342705841 1.880000e-82 316.0
54 TraesCS4D01G260600 chrUn 91.416 233 17 2 324 556 366520248 366520019 1.880000e-82 316.0
55 TraesCS4D01G260600 chrUn 91.416 233 17 2 324 556 467373685 467373456 1.880000e-82 316.0
56 TraesCS4D01G260600 chrUn 90.987 233 18 2 324 556 371910471 371910700 8.770000e-81 311.0
57 TraesCS4D01G260600 chrUn 84.395 314 28 9 37 329 258859848 258860161 4.110000e-74 289.0
58 TraesCS4D01G260600 chrUn 84.395 314 28 9 37 329 334646905 334646592 4.110000e-74 289.0
59 TraesCS4D01G260600 chrUn 82.895 152 6 3 2966 3097 319152031 319152182 5.710000e-23 119.0
60 TraesCS4D01G260600 chrUn 82.895 152 6 3 2966 3097 389502809 389502960 5.710000e-23 119.0
61 TraesCS4D01G260600 chr5B 90.756 238 16 6 2742 2973 643129317 643129080 2.440000e-81 313.0
62 TraesCS4D01G260600 chr5B 77.281 559 103 22 1661 2207 145923239 145922693 1.130000e-79 307.0
63 TraesCS4D01G260600 chr5B 84.936 312 33 12 2724 3024 608316044 608316352 1.470000e-78 303.0
64 TraesCS4D01G260600 chr1D 85.971 278 30 9 2691 2962 99471922 99471648 4.110000e-74 289.0
65 TraesCS4D01G260600 chr1D 81.818 154 8 17 2963 3098 25216965 25216814 9.550000e-21 111.0
66 TraesCS4D01G260600 chr7B 94.792 96 5 0 3160 3255 295101370 295101275 2.020000e-32 150.0
67 TraesCS4D01G260600 chr7A 88.596 114 7 5 2985 3098 727845048 727844941 2.040000e-27 134.0
68 TraesCS4D01G260600 chr2A 85.156 128 18 1 430 556 752766284 752766411 2.640000e-26 130.0
69 TraesCS4D01G260600 chr7D 96.078 51 2 0 3091 3141 590072428 590072378 2.080000e-12 84.2
70 TraesCS4D01G260600 chr7D 100.000 34 0 0 554 587 581232509 581232476 2.710000e-06 63.9
71 TraesCS4D01G260600 chr7D 100.000 34 0 0 554 587 628693668 628693635 2.710000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G260600 chr4D 430876793 430880047 3254 True 6011.0 6011 100.0000 1 3255 1 chr4D.!!$R1 3254
1 TraesCS4D01G260600 chr4A 32591568 32593956 2388 True 1538.0 2933 92.2020 589 2694 2 chr4A.!!$R2 2105
2 TraesCS4D01G260600 chr4B 529355702 529357571 1869 True 2710.0 2710 92.7970 589 2480 1 chr4B.!!$R1 1891
3 TraesCS4D01G260600 chr6D 162297444 162298094 650 False 504.3 941 98.6510 1 589 2 chr6D.!!$F1 588
4 TraesCS4D01G260600 chr2B 3738155 3738781 626 True 780.0 780 89.1550 1637 2261 1 chr2B.!!$R1 624
5 TraesCS4D01G260600 chr2B 3824680 3825306 626 True 780.0 780 89.1550 1637 2261 1 chr2B.!!$R2 624
6 TraesCS4D01G260600 chr2B 4117040 4117666 626 True 774.0 774 88.9950 1637 2261 1 chr2B.!!$R3 624
7 TraesCS4D01G260600 chr2D 50040209 50040795 586 False 623.0 623 86.7570 1 556 1 chr2D.!!$F1 555
8 TraesCS4D01G260600 chr2D 7666814 7667712 898 True 469.5 756 89.1465 1162 2261 2 chr2D.!!$R2 1099
9 TraesCS4D01G260600 chr6B 5067198 5067757 559 True 619.0 619 87.7010 31 555 1 chr6B.!!$R2 524
10 TraesCS4D01G260600 chr5D 505362785 505363318 533 False 453.0 453 82.3320 1 556 1 chr5D.!!$F3 555
11 TraesCS4D01G260600 chr5D 134478633 134479179 546 True 329.0 329 77.9170 1661 2207 1 chr5D.!!$R1 546
12 TraesCS4D01G260600 chr1B 142795986 142796498 512 True 453.0 453 83.6580 76 556 1 chr1B.!!$R2 480
13 TraesCS4D01G260600 chr5A 158652682 158653228 546 True 351.0 351 78.6740 1661 2207 1 chr5A.!!$R1 546
14 TraesCS4D01G260600 chr5B 145922693 145923239 546 True 307.0 307 77.2810 1661 2207 1 chr5B.!!$R1 546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
683 757 0.108329 CGGGAACAACGACAGGCTAT 60.108 55.0 0.0 0.0 0.0 2.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2528 2651 0.247736 AGTTTCGGCTCGAGATGCTT 59.752 50.0 18.75 0.0 37.14 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
524 583 4.745125 CCTGTCATAATCGCGATAAAGTGT 59.255 41.667 24.00 8.08 0.00 3.55
528 587 8.360325 TGTCATAATCGCGATAAAGTGTAAAT 57.640 30.769 24.00 4.84 0.00 1.40
556 615 2.219903 GCGATTTGGGGTTTTTGAAACG 59.780 45.455 0.00 0.00 0.00 3.60
557 616 2.219903 CGATTTGGGGTTTTTGAAACGC 59.780 45.455 10.91 10.91 0.00 4.84
558 617 1.641577 TTTGGGGTTTTTGAAACGCG 58.358 45.000 3.53 3.53 34.39 6.01
559 618 0.815734 TTGGGGTTTTTGAAACGCGA 59.184 45.000 15.93 7.59 34.39 5.87
563 629 2.219903 GGGGTTTTTGAAACGCGAATTG 59.780 45.455 15.93 0.00 34.39 2.32
572 638 3.312973 TGAAACGCGAATTGTGGTAGTTT 59.687 39.130 15.93 0.00 33.71 2.66
574 640 5.007430 TGAAACGCGAATTGTGGTAGTTTTA 59.993 36.000 15.93 0.00 31.57 1.52
575 641 5.616488 AACGCGAATTGTGGTAGTTTTAT 57.384 34.783 15.93 0.00 0.00 1.40
577 643 3.783943 CGCGAATTGTGGTAGTTTTATGC 59.216 43.478 0.00 0.00 0.00 3.14
578 644 4.436852 CGCGAATTGTGGTAGTTTTATGCT 60.437 41.667 0.00 0.00 0.00 3.79
579 645 5.220510 CGCGAATTGTGGTAGTTTTATGCTA 60.221 40.000 0.00 0.00 0.00 3.49
580 646 6.511121 CGCGAATTGTGGTAGTTTTATGCTAT 60.511 38.462 0.00 0.00 0.00 2.97
581 647 7.193595 GCGAATTGTGGTAGTTTTATGCTATT 58.806 34.615 0.00 0.00 0.00 1.73
582 648 7.700656 GCGAATTGTGGTAGTTTTATGCTATTT 59.299 33.333 0.00 0.00 0.00 1.40
587 653 9.953565 TTGTGGTAGTTTTATGCTATTTACTCT 57.046 29.630 0.00 0.00 0.00 3.24
649 715 2.899838 GTGTTGCAGGACACCGCA 60.900 61.111 10.05 0.00 43.16 5.69
683 757 0.108329 CGGGAACAACGACAGGCTAT 60.108 55.000 0.00 0.00 0.00 2.97
685 759 2.547826 GGGAACAACGACAGGCTATAC 58.452 52.381 0.00 0.00 0.00 1.47
687 761 3.431766 GGGAACAACGACAGGCTATACAT 60.432 47.826 0.00 0.00 0.00 2.29
849 928 2.140717 CCACCTAAACTCGGTCACAAC 58.859 52.381 0.00 0.00 30.82 3.32
868 947 5.065218 CACAACAAGTCAACACTAGAGCTTT 59.935 40.000 0.00 0.00 30.14 3.51
869 948 6.257849 CACAACAAGTCAACACTAGAGCTTTA 59.742 38.462 0.00 0.00 30.14 1.85
903 988 1.227853 AAGCCCAGTCACACCGAAC 60.228 57.895 0.00 0.00 0.00 3.95
931 1029 2.206750 CTCTACTTCTCCCTCGAGTCG 58.793 57.143 12.31 6.09 37.40 4.18
932 1030 1.829849 TCTACTTCTCCCTCGAGTCGA 59.170 52.381 15.64 15.64 37.40 4.20
1315 1422 0.179124 CTGGACGTAAGCCTCTCTGC 60.179 60.000 0.00 0.00 45.62 4.26
1327 1437 2.202623 CTCTGCCCGAGCACGTAC 60.203 66.667 2.18 0.00 46.52 3.67
1328 1438 2.675423 TCTGCCCGAGCACGTACT 60.675 61.111 2.18 0.00 46.52 2.73
1456 1575 1.682344 GGTCCCCATGGAAACCAGC 60.682 63.158 23.42 6.30 44.07 4.85
1460 1579 1.603455 CCCATGGAAACCAGCGTGT 60.603 57.895 15.22 0.00 36.75 4.49
1470 1589 3.991051 CAGCGTGTCCCACTCGGT 61.991 66.667 0.00 0.00 44.87 4.69
1473 1592 2.258591 CGTGTCCCACTCGGTGAG 59.741 66.667 5.71 0.00 35.23 3.51
1478 1597 0.970937 GTCCCACTCGGTGAGATCCA 60.971 60.000 0.00 0.00 35.23 3.41
1651 1770 1.367840 GTTGTCAGGAGAGCACGGT 59.632 57.895 0.00 0.00 0.00 4.83
2346 2469 5.238650 GTGGTGTTATTGAGCTACACAAACT 59.761 40.000 16.42 0.00 42.96 2.66
2359 2482 2.552315 ACACAAACTTATGCCAGAACCG 59.448 45.455 0.00 0.00 0.00 4.44
2360 2483 2.552315 CACAAACTTATGCCAGAACCGT 59.448 45.455 0.00 0.00 0.00 4.83
2369 2492 2.489971 TGCCAGAACCGTACAAAAGAG 58.510 47.619 0.00 0.00 0.00 2.85
2429 2552 9.317936 CTTGACATATAACTAGTTCAATGCTCA 57.682 33.333 21.46 19.80 0.00 4.26
2459 2582 9.781834 TTTGCCGACAATATTTTTAGACATAAG 57.218 29.630 0.00 0.00 35.21 1.73
2507 2630 8.322091 ACTATGAATAAATGGTATACCTCTGGC 58.678 37.037 22.41 7.05 36.82 4.85
2508 2631 6.508030 TGAATAAATGGTATACCTCTGGCA 57.492 37.500 22.41 9.33 36.82 4.92
2512 2635 9.515226 GAATAAATGGTATACCTCTGGCAATAA 57.485 33.333 22.41 0.00 36.82 1.40
2521 2644 5.450818 ACCTCTGGCAATAATTGGAGTAA 57.549 39.130 0.00 0.00 0.00 2.24
2522 2645 5.193679 ACCTCTGGCAATAATTGGAGTAAC 58.806 41.667 0.00 0.00 0.00 2.50
2523 2646 5.044846 ACCTCTGGCAATAATTGGAGTAACT 60.045 40.000 0.00 0.00 0.00 2.24
2524 2647 5.888161 CCTCTGGCAATAATTGGAGTAACTT 59.112 40.000 0.00 0.00 0.00 2.66
2525 2648 7.054124 CCTCTGGCAATAATTGGAGTAACTTA 58.946 38.462 0.00 0.00 0.00 2.24
2526 2649 7.227512 CCTCTGGCAATAATTGGAGTAACTTAG 59.772 40.741 0.00 0.00 0.00 2.18
2527 2650 7.630082 TCTGGCAATAATTGGAGTAACTTAGT 58.370 34.615 0.00 0.00 0.00 2.24
2528 2651 8.764558 TCTGGCAATAATTGGAGTAACTTAGTA 58.235 33.333 0.00 0.00 0.00 1.82
2529 2652 9.391006 CTGGCAATAATTGGAGTAACTTAGTAA 57.609 33.333 0.00 0.00 0.00 2.24
2530 2653 9.391006 TGGCAATAATTGGAGTAACTTAGTAAG 57.609 33.333 8.41 8.41 0.00 2.34
2531 2654 8.343366 GGCAATAATTGGAGTAACTTAGTAAGC 58.657 37.037 9.92 0.00 0.00 3.09
2532 2655 8.889717 GCAATAATTGGAGTAACTTAGTAAGCA 58.110 33.333 9.92 0.00 0.00 3.91
2536 2659 8.950208 AATTGGAGTAACTTAGTAAGCATCTC 57.050 34.615 9.92 13.03 0.00 2.75
2537 2660 6.132791 TGGAGTAACTTAGTAAGCATCTCG 57.867 41.667 9.92 0.00 0.00 4.04
2549 2672 0.647925 GCATCTCGAGCCGAAACTTC 59.352 55.000 7.81 0.00 34.74 3.01
2554 2677 3.399330 TCTCGAGCCGAAACTTCAAATT 58.601 40.909 7.81 0.00 34.74 1.82
2561 2684 3.056821 GCCGAAACTTCAAATTTAGCCCT 60.057 43.478 0.00 0.00 0.00 5.19
2562 2685 4.560716 GCCGAAACTTCAAATTTAGCCCTT 60.561 41.667 0.00 0.00 0.00 3.95
2564 2687 5.048013 CCGAAACTTCAAATTTAGCCCTTCT 60.048 40.000 0.00 0.00 0.00 2.85
2566 2689 6.072452 CGAAACTTCAAATTTAGCCCTTCTCT 60.072 38.462 0.00 0.00 0.00 3.10
2567 2690 6.581171 AACTTCAAATTTAGCCCTTCTCTG 57.419 37.500 0.00 0.00 0.00 3.35
2569 2692 6.071320 ACTTCAAATTTAGCCCTTCTCTGTT 58.929 36.000 0.00 0.00 0.00 3.16
2570 2693 5.964958 TCAAATTTAGCCCTTCTCTGTTG 57.035 39.130 0.00 0.00 0.00 3.33
2571 2694 5.385198 TCAAATTTAGCCCTTCTCTGTTGT 58.615 37.500 0.00 0.00 0.00 3.32
2572 2695 5.241506 TCAAATTTAGCCCTTCTCTGTTGTG 59.758 40.000 0.00 0.00 0.00 3.33
2573 2696 3.857157 TTTAGCCCTTCTCTGTTGTGT 57.143 42.857 0.00 0.00 0.00 3.72
2574 2697 3.857157 TTAGCCCTTCTCTGTTGTGTT 57.143 42.857 0.00 0.00 0.00 3.32
2576 2699 1.771255 AGCCCTTCTCTGTTGTGTTCT 59.229 47.619 0.00 0.00 0.00 3.01
2578 2701 2.291741 GCCCTTCTCTGTTGTGTTCTTG 59.708 50.000 0.00 0.00 0.00 3.02
2579 2702 3.545703 CCCTTCTCTGTTGTGTTCTTGT 58.454 45.455 0.00 0.00 0.00 3.16
2580 2703 3.947834 CCCTTCTCTGTTGTGTTCTTGTT 59.052 43.478 0.00 0.00 0.00 2.83
2581 2704 4.201950 CCCTTCTCTGTTGTGTTCTTGTTG 60.202 45.833 0.00 0.00 0.00 3.33
2583 2706 5.106157 CCTTCTCTGTTGTGTTCTTGTTGTT 60.106 40.000 0.00 0.00 0.00 2.83
2620 3044 4.038642 TCACCATTAACACTTTTGCCCTTC 59.961 41.667 0.00 0.00 0.00 3.46
2621 3045 4.039124 CACCATTAACACTTTTGCCCTTCT 59.961 41.667 0.00 0.00 0.00 2.85
2636 3060 4.102524 TGCCCTTCTCTGTTGACTTCTTTA 59.897 41.667 0.00 0.00 0.00 1.85
2638 3062 5.611374 CCCTTCTCTGTTGACTTCTTTACA 58.389 41.667 0.00 0.00 0.00 2.41
2642 3066 6.222038 TCTCTGTTGACTTCTTTACACTGT 57.778 37.500 0.00 0.00 0.00 3.55
2653 3077 9.090692 GACTTCTTTACACTGTACACTTGTTTA 57.909 33.333 10.00 0.00 0.00 2.01
2694 3118 5.179742 GCAGAAAATTTGAACATTGCATCCA 59.820 36.000 0.00 0.00 0.00 3.41
2695 3119 6.619874 GCAGAAAATTTGAACATTGCATCCAG 60.620 38.462 0.00 0.00 0.00 3.86
2696 3120 6.647481 CAGAAAATTTGAACATTGCATCCAGA 59.353 34.615 0.00 0.00 0.00 3.86
2697 3121 7.171848 CAGAAAATTTGAACATTGCATCCAGAA 59.828 33.333 0.00 0.00 0.00 3.02
2698 3122 7.716123 AGAAAATTTGAACATTGCATCCAGAAA 59.284 29.630 0.00 0.00 0.00 2.52
2699 3123 6.790285 AATTTGAACATTGCATCCAGAAAC 57.210 33.333 0.00 0.00 0.00 2.78
2700 3124 4.933505 TTGAACATTGCATCCAGAAACA 57.066 36.364 0.00 0.00 0.00 2.83
2701 3125 4.933505 TGAACATTGCATCCAGAAACAA 57.066 36.364 0.00 0.00 0.00 2.83
2702 3126 4.873817 TGAACATTGCATCCAGAAACAAG 58.126 39.130 0.00 0.00 0.00 3.16
2703 3127 4.583907 TGAACATTGCATCCAGAAACAAGA 59.416 37.500 0.00 0.00 0.00 3.02
2704 3128 5.068855 TGAACATTGCATCCAGAAACAAGAA 59.931 36.000 0.00 0.00 0.00 2.52
2705 3129 4.874970 ACATTGCATCCAGAAACAAGAAC 58.125 39.130 0.00 0.00 0.00 3.01
2706 3130 4.586001 ACATTGCATCCAGAAACAAGAACT 59.414 37.500 0.00 0.00 0.00 3.01
2707 3131 4.836125 TTGCATCCAGAAACAAGAACTC 57.164 40.909 0.00 0.00 0.00 3.01
2708 3132 3.819368 TGCATCCAGAAACAAGAACTCA 58.181 40.909 0.00 0.00 0.00 3.41
2709 3133 3.817084 TGCATCCAGAAACAAGAACTCAG 59.183 43.478 0.00 0.00 0.00 3.35
2710 3134 3.190118 GCATCCAGAAACAAGAACTCAGG 59.810 47.826 0.00 0.00 0.00 3.86
2711 3135 4.392940 CATCCAGAAACAAGAACTCAGGT 58.607 43.478 0.00 0.00 0.00 4.00
2712 3136 4.503714 TCCAGAAACAAGAACTCAGGTT 57.496 40.909 0.00 0.00 38.52 3.50
2719 3143 4.695560 GAACTCAGGTTCCACCGG 57.304 61.111 0.00 0.00 44.90 5.28
2720 3144 1.003718 GAACTCAGGTTCCACCGGG 60.004 63.158 6.32 0.00 44.90 5.73
2721 3145 3.192103 AACTCAGGTTCCACCGGGC 62.192 63.158 6.32 0.00 44.90 6.13
2722 3146 4.760047 CTCAGGTTCCACCGGGCG 62.760 72.222 6.32 0.00 44.90 6.13
2740 3164 3.193471 GCTCCTCAGCGATTAGAGC 57.807 57.895 1.15 1.15 42.74 4.09
2741 3165 0.673437 GCTCCTCAGCGATTAGAGCT 59.327 55.000 8.63 0.00 45.11 4.09
2742 3166 1.068434 GCTCCTCAGCGATTAGAGCTT 59.932 52.381 8.63 0.00 45.11 3.74
2743 3167 2.862140 GCTCCTCAGCGATTAGAGCTTC 60.862 54.545 8.63 0.00 45.11 3.86
2744 3168 2.622942 CTCCTCAGCGATTAGAGCTTCT 59.377 50.000 0.00 0.00 44.06 2.85
2745 3169 2.621055 TCCTCAGCGATTAGAGCTTCTC 59.379 50.000 0.00 0.00 44.06 2.87
2746 3170 2.604373 CCTCAGCGATTAGAGCTTCTCG 60.604 54.545 0.00 0.00 44.06 4.04
2747 3171 1.335182 TCAGCGATTAGAGCTTCTCGG 59.665 52.381 9.27 0.00 44.06 4.63
2748 3172 0.031449 AGCGATTAGAGCTTCTCGGC 59.969 55.000 9.27 0.77 43.24 5.54
2749 3173 0.941936 GCGATTAGAGCTTCTCGGCC 60.942 60.000 0.00 0.00 35.36 6.13
2750 3174 0.661780 CGATTAGAGCTTCTCGGCCG 60.662 60.000 22.12 22.12 35.36 6.13
2751 3175 0.386113 GATTAGAGCTTCTCGGCCGT 59.614 55.000 27.15 3.60 35.36 5.68
2752 3176 0.386113 ATTAGAGCTTCTCGGCCGTC 59.614 55.000 27.15 14.40 35.36 4.79
2753 3177 1.664321 TTAGAGCTTCTCGGCCGTCC 61.664 60.000 27.15 9.93 35.36 4.79
2763 3187 3.087176 GGCCGTCCGATCGTTTTC 58.913 61.111 15.09 0.49 0.00 2.29
2764 3188 2.458610 GGCCGTCCGATCGTTTTCC 61.459 63.158 15.09 4.74 0.00 3.13
2765 3189 1.447314 GCCGTCCGATCGTTTTCCT 60.447 57.895 15.09 0.00 0.00 3.36
2766 3190 1.693083 GCCGTCCGATCGTTTTCCTG 61.693 60.000 15.09 0.00 0.00 3.86
2767 3191 0.108992 CCGTCCGATCGTTTTCCTGA 60.109 55.000 15.09 0.00 0.00 3.86
2768 3192 1.470979 CCGTCCGATCGTTTTCCTGAT 60.471 52.381 15.09 0.00 0.00 2.90
2769 3193 1.588404 CGTCCGATCGTTTTCCTGATG 59.412 52.381 15.09 3.85 0.00 3.07
2770 3194 1.327764 GTCCGATCGTTTTCCTGATGC 59.672 52.381 15.09 0.00 0.00 3.91
2771 3195 0.301687 CCGATCGTTTTCCTGATGCG 59.698 55.000 15.09 0.00 0.00 4.73
2772 3196 1.277326 CGATCGTTTTCCTGATGCGA 58.723 50.000 7.03 0.00 36.02 5.10
2773 3197 1.860950 CGATCGTTTTCCTGATGCGAT 59.139 47.619 7.03 0.00 43.65 4.58
2774 3198 2.285220 CGATCGTTTTCCTGATGCGATT 59.715 45.455 7.03 0.00 41.50 3.34
2775 3199 3.602491 CGATCGTTTTCCTGATGCGATTC 60.602 47.826 7.03 0.00 41.50 2.52
2776 3200 2.006888 TCGTTTTCCTGATGCGATTCC 58.993 47.619 0.00 0.00 0.00 3.01
2777 3201 1.737236 CGTTTTCCTGATGCGATTCCA 59.263 47.619 0.00 0.00 0.00 3.53
2778 3202 2.223112 CGTTTTCCTGATGCGATTCCAG 60.223 50.000 0.00 0.00 0.00 3.86
2779 3203 1.382522 TTTCCTGATGCGATTCCAGC 58.617 50.000 0.00 0.00 0.00 4.85
2780 3204 0.464373 TTCCTGATGCGATTCCAGCC 60.464 55.000 0.00 0.00 0.00 4.85
2781 3205 2.249535 CCTGATGCGATTCCAGCCG 61.250 63.158 0.00 0.00 0.00 5.52
2782 3206 1.522355 CTGATGCGATTCCAGCCGT 60.522 57.895 0.00 0.00 0.00 5.68
2783 3207 1.078497 TGATGCGATTCCAGCCGTT 60.078 52.632 0.00 0.00 0.00 4.44
2784 3208 1.353103 GATGCGATTCCAGCCGTTG 59.647 57.895 0.00 0.00 0.00 4.10
2793 3217 2.202932 CAGCCGTTGGATCTCGGG 60.203 66.667 19.61 7.25 45.85 5.14
2794 3218 4.162690 AGCCGTTGGATCTCGGGC 62.163 66.667 19.61 14.66 45.85 6.13
2795 3219 4.162690 GCCGTTGGATCTCGGGCT 62.163 66.667 19.61 0.00 45.85 5.19
2796 3220 2.107141 CCGTTGGATCTCGGGCTC 59.893 66.667 13.65 0.00 42.61 4.70
2797 3221 2.278857 CGTTGGATCTCGGGCTCG 60.279 66.667 0.00 0.00 37.82 5.03
2798 3222 2.107141 GTTGGATCTCGGGCTCGG 59.893 66.667 5.94 0.00 36.95 4.63
2799 3223 3.849951 TTGGATCTCGGGCTCGGC 61.850 66.667 5.94 0.00 36.95 5.54
2800 3224 4.841617 TGGATCTCGGGCTCGGCT 62.842 66.667 5.94 0.00 36.95 5.52
2801 3225 3.984749 GGATCTCGGGCTCGGCTC 61.985 72.222 5.94 0.00 36.95 4.70
2802 3226 3.219928 GATCTCGGGCTCGGCTCA 61.220 66.667 5.94 0.00 36.95 4.26
2803 3227 3.492311 GATCTCGGGCTCGGCTCAC 62.492 68.421 5.94 0.00 36.95 3.51
2808 3232 4.803426 GGGCTCGGCTCACGTGAG 62.803 72.222 35.80 35.80 44.69 3.51
2809 3233 4.803426 GGCTCGGCTCACGTGAGG 62.803 72.222 38.72 26.41 44.69 3.86
2821 3245 3.267900 CGTGAGGCGTCGGATATTT 57.732 52.632 1.39 0.00 35.54 1.40
2822 3246 2.410785 CGTGAGGCGTCGGATATTTA 57.589 50.000 1.39 0.00 35.54 1.40
2823 3247 2.049228 CGTGAGGCGTCGGATATTTAC 58.951 52.381 1.39 0.00 35.54 2.01
2824 3248 2.401351 GTGAGGCGTCGGATATTTACC 58.599 52.381 1.39 0.00 0.00 2.85
2825 3249 2.033372 TGAGGCGTCGGATATTTACCA 58.967 47.619 1.39 0.00 0.00 3.25
2826 3250 2.035449 TGAGGCGTCGGATATTTACCAG 59.965 50.000 1.39 0.00 0.00 4.00
2827 3251 2.295349 GAGGCGTCGGATATTTACCAGA 59.705 50.000 0.00 0.00 0.00 3.86
2828 3252 2.897969 AGGCGTCGGATATTTACCAGAT 59.102 45.455 0.00 0.00 0.00 2.90
2829 3253 3.056749 AGGCGTCGGATATTTACCAGATC 60.057 47.826 0.00 0.00 0.00 2.75
2830 3254 2.915463 GCGTCGGATATTTACCAGATCG 59.085 50.000 0.00 0.00 0.00 3.69
2831 3255 2.915463 CGTCGGATATTTACCAGATCGC 59.085 50.000 0.00 0.00 0.00 4.58
2832 3256 3.366070 CGTCGGATATTTACCAGATCGCT 60.366 47.826 0.00 0.00 0.00 4.93
2833 3257 3.921021 GTCGGATATTTACCAGATCGCTG 59.079 47.826 0.00 0.00 41.93 5.18
2834 3258 3.572682 TCGGATATTTACCAGATCGCTGT 59.427 43.478 0.00 0.00 40.63 4.40
2835 3259 3.675225 CGGATATTTACCAGATCGCTGTG 59.325 47.826 0.00 0.00 40.63 3.66
2836 3260 4.558697 CGGATATTTACCAGATCGCTGTGA 60.559 45.833 0.00 0.00 40.63 3.58
2837 3261 4.926238 GGATATTTACCAGATCGCTGTGAG 59.074 45.833 0.00 0.00 40.63 3.51
2838 3262 2.010145 TTTACCAGATCGCTGTGAGC 57.990 50.000 0.00 0.00 40.63 4.26
2839 3263 0.175760 TTACCAGATCGCTGTGAGCC 59.824 55.000 2.42 0.00 40.63 4.70
2840 3264 2.004808 TACCAGATCGCTGTGAGCCG 62.005 60.000 2.42 0.00 40.63 5.52
2841 3265 2.182791 CAGATCGCTGTGAGCCGT 59.817 61.111 2.42 0.00 38.18 5.68
2842 3266 1.875813 CAGATCGCTGTGAGCCGTC 60.876 63.158 2.42 0.00 38.18 4.79
2843 3267 2.951745 GATCGCTGTGAGCCGTCG 60.952 66.667 0.00 0.00 38.18 5.12
2844 3268 4.498520 ATCGCTGTGAGCCGTCGG 62.499 66.667 6.99 6.99 38.18 4.79
2846 3270 4.498520 CGCTGTGAGCCGTCGGAT 62.499 66.667 17.49 9.33 38.18 4.18
2847 3271 2.805546 GCTGTGAGCCGTCGGATA 59.194 61.111 17.49 0.00 34.48 2.59
2848 3272 1.141019 GCTGTGAGCCGTCGGATAA 59.859 57.895 17.49 0.00 34.48 1.75
2849 3273 0.459585 GCTGTGAGCCGTCGGATAAA 60.460 55.000 17.49 0.00 34.48 1.40
2850 3274 2.004583 CTGTGAGCCGTCGGATAAAA 57.995 50.000 17.49 0.00 0.00 1.52
2851 3275 2.550978 CTGTGAGCCGTCGGATAAAAT 58.449 47.619 17.49 0.00 0.00 1.82
2852 3276 2.936498 CTGTGAGCCGTCGGATAAAATT 59.064 45.455 17.49 0.00 0.00 1.82
2853 3277 2.933906 TGTGAGCCGTCGGATAAAATTC 59.066 45.455 17.49 0.00 0.00 2.17
2854 3278 2.287103 GTGAGCCGTCGGATAAAATTCC 59.713 50.000 17.49 0.00 0.00 3.01
2855 3279 2.093394 TGAGCCGTCGGATAAAATTCCA 60.093 45.455 17.49 0.00 35.34 3.53
2856 3280 2.940410 GAGCCGTCGGATAAAATTCCAA 59.060 45.455 17.49 0.00 35.34 3.53
2857 3281 3.551846 AGCCGTCGGATAAAATTCCAAT 58.448 40.909 17.49 0.00 35.34 3.16
2858 3282 3.315191 AGCCGTCGGATAAAATTCCAATG 59.685 43.478 17.49 0.00 35.34 2.82
2859 3283 3.550030 GCCGTCGGATAAAATTCCAATGG 60.550 47.826 17.49 0.00 35.34 3.16
2860 3284 3.550030 CCGTCGGATAAAATTCCAATGGC 60.550 47.826 4.91 0.00 35.34 4.40
2861 3285 3.066064 CGTCGGATAAAATTCCAATGGCA 59.934 43.478 0.00 0.00 35.34 4.92
2862 3286 4.439426 CGTCGGATAAAATTCCAATGGCAA 60.439 41.667 0.00 0.00 35.34 4.52
2863 3287 4.803613 GTCGGATAAAATTCCAATGGCAAC 59.196 41.667 0.00 0.00 35.34 4.17
2864 3288 4.464244 TCGGATAAAATTCCAATGGCAACA 59.536 37.500 0.00 0.00 43.82 3.33
2865 3289 4.805192 CGGATAAAATTCCAATGGCAACAG 59.195 41.667 0.00 0.00 43.19 3.16
2866 3290 5.394005 CGGATAAAATTCCAATGGCAACAGA 60.394 40.000 0.00 0.00 43.19 3.41
2867 3291 6.405538 GGATAAAATTCCAATGGCAACAGAA 58.594 36.000 0.00 0.00 42.77 3.02
2868 3292 7.049754 GGATAAAATTCCAATGGCAACAGAAT 58.950 34.615 0.00 0.00 42.77 2.40
2869 3293 7.011669 GGATAAAATTCCAATGGCAACAGAATG 59.988 37.037 9.20 0.00 42.77 2.67
2883 3307 3.963383 CAGAATGTAAATACGGTGCCC 57.037 47.619 0.00 0.00 0.00 5.36
2884 3308 2.616842 CAGAATGTAAATACGGTGCCCC 59.383 50.000 0.00 0.00 0.00 5.80
2885 3309 1.951602 GAATGTAAATACGGTGCCCCC 59.048 52.381 0.00 0.00 0.00 5.40
2886 3310 0.920438 ATGTAAATACGGTGCCCCCA 59.080 50.000 0.00 0.00 0.00 4.96
2887 3311 0.035247 TGTAAATACGGTGCCCCCAC 60.035 55.000 0.00 0.00 41.32 4.61
2901 3325 2.035626 CCACCAGGGCATTTCGGT 59.964 61.111 0.00 0.00 0.00 4.69
2902 3326 2.046285 CCACCAGGGCATTTCGGTC 61.046 63.158 0.00 0.00 0.00 4.79
2903 3327 1.303236 CACCAGGGCATTTCGGTCA 60.303 57.895 0.00 0.00 0.00 4.02
2904 3328 0.680921 CACCAGGGCATTTCGGTCAT 60.681 55.000 0.00 0.00 0.00 3.06
2905 3329 0.039618 ACCAGGGCATTTCGGTCATT 59.960 50.000 0.00 0.00 0.00 2.57
2906 3330 1.185315 CCAGGGCATTTCGGTCATTT 58.815 50.000 0.00 0.00 0.00 2.32
2907 3331 1.134946 CCAGGGCATTTCGGTCATTTC 59.865 52.381 0.00 0.00 0.00 2.17
2908 3332 1.094785 AGGGCATTTCGGTCATTTCG 58.905 50.000 0.00 0.00 0.00 3.46
2909 3333 0.525455 GGGCATTTCGGTCATTTCGC 60.525 55.000 0.00 0.00 0.00 4.70
2910 3334 0.861450 GGCATTTCGGTCATTTCGCG 60.861 55.000 0.00 0.00 0.00 5.87
2911 3335 0.179200 GCATTTCGGTCATTTCGCGT 60.179 50.000 5.77 0.00 0.00 6.01
2912 3336 1.061421 GCATTTCGGTCATTTCGCGTA 59.939 47.619 5.77 0.00 0.00 4.42
2913 3337 2.845764 GCATTTCGGTCATTTCGCGTAG 60.846 50.000 5.77 0.00 0.00 3.51
2914 3338 1.352114 TTTCGGTCATTTCGCGTAGG 58.648 50.000 5.77 0.00 0.00 3.18
2915 3339 0.458889 TTCGGTCATTTCGCGTAGGG 60.459 55.000 5.77 0.00 44.04 3.53
2916 3340 1.881252 CGGTCATTTCGCGTAGGGG 60.881 63.158 5.77 0.00 42.39 4.79
2917 3341 1.523032 GGTCATTTCGCGTAGGGGG 60.523 63.158 5.77 0.00 42.39 5.40
2918 3342 1.219935 GTCATTTCGCGTAGGGGGT 59.780 57.895 5.77 0.00 42.39 4.95
2919 3343 0.461135 GTCATTTCGCGTAGGGGGTA 59.539 55.000 5.77 0.00 42.39 3.69
2920 3344 1.069668 GTCATTTCGCGTAGGGGGTAT 59.930 52.381 5.77 0.00 42.39 2.73
2921 3345 2.297033 GTCATTTCGCGTAGGGGGTATA 59.703 50.000 5.77 0.00 42.39 1.47
2922 3346 2.964464 TCATTTCGCGTAGGGGGTATAA 59.036 45.455 5.77 0.00 42.39 0.98
2923 3347 3.387374 TCATTTCGCGTAGGGGGTATAAA 59.613 43.478 5.77 0.00 42.39 1.40
2924 3348 3.902881 TTTCGCGTAGGGGGTATAAAA 57.097 42.857 5.77 0.00 42.39 1.52
2925 3349 3.457610 TTCGCGTAGGGGGTATAAAAG 57.542 47.619 5.77 0.00 42.39 2.27
2926 3350 1.688197 TCGCGTAGGGGGTATAAAAGG 59.312 52.381 5.77 0.00 42.39 3.11
2927 3351 1.270465 CGCGTAGGGGGTATAAAAGGG 60.270 57.143 0.00 0.00 36.55 3.95
2928 3352 1.072806 GCGTAGGGGGTATAAAAGGGG 59.927 57.143 0.00 0.00 0.00 4.79
2929 3353 1.701292 CGTAGGGGGTATAAAAGGGGG 59.299 57.143 0.00 0.00 0.00 5.40
2930 3354 1.426598 GTAGGGGGTATAAAAGGGGGC 59.573 57.143 0.00 0.00 0.00 5.80
2931 3355 1.002794 AGGGGGTATAAAAGGGGGCC 61.003 60.000 0.00 0.00 0.00 5.80
2932 3356 1.298157 GGGGGTATAAAAGGGGGCCA 61.298 60.000 4.39 0.00 0.00 5.36
2933 3357 0.105862 GGGGTATAAAAGGGGGCCAC 60.106 60.000 4.39 0.00 0.00 5.01
2934 3358 0.931468 GGGTATAAAAGGGGGCCACT 59.069 55.000 0.00 0.00 0.00 4.00
2935 3359 1.133575 GGGTATAAAAGGGGGCCACTC 60.134 57.143 9.82 0.00 0.00 3.51
2936 3360 1.133575 GGTATAAAAGGGGGCCACTCC 60.134 57.143 9.82 0.00 0.00 3.85
2945 3369 2.668632 GGCCACTCCCGTGATGAA 59.331 61.111 0.00 0.00 43.97 2.57
2946 3370 1.745489 GGCCACTCCCGTGATGAAC 60.745 63.158 0.00 0.00 43.97 3.18
2947 3371 1.745489 GCCACTCCCGTGATGAACC 60.745 63.158 0.00 0.00 43.97 3.62
2948 3372 1.078426 CCACTCCCGTGATGAACCC 60.078 63.158 0.00 0.00 43.97 4.11
2949 3373 1.553690 CCACTCCCGTGATGAACCCT 61.554 60.000 0.00 0.00 43.97 4.34
2950 3374 1.191535 CACTCCCGTGATGAACCCTA 58.808 55.000 0.00 0.00 43.97 3.53
2951 3375 1.137086 CACTCCCGTGATGAACCCTAG 59.863 57.143 0.00 0.00 43.97 3.02
2952 3376 0.105039 CTCCCGTGATGAACCCTAGC 59.895 60.000 0.00 0.00 0.00 3.42
2953 3377 1.146263 CCCGTGATGAACCCTAGCC 59.854 63.158 0.00 0.00 0.00 3.93
2954 3378 1.338136 CCCGTGATGAACCCTAGCCT 61.338 60.000 0.00 0.00 0.00 4.58
2955 3379 0.105039 CCGTGATGAACCCTAGCCTC 59.895 60.000 0.00 0.00 0.00 4.70
2956 3380 0.105039 CGTGATGAACCCTAGCCTCC 59.895 60.000 0.00 0.00 0.00 4.30
2957 3381 1.501582 GTGATGAACCCTAGCCTCCT 58.498 55.000 0.00 0.00 0.00 3.69
2958 3382 1.414550 GTGATGAACCCTAGCCTCCTC 59.585 57.143 0.00 0.00 0.00 3.71
2959 3383 1.292242 TGATGAACCCTAGCCTCCTCT 59.708 52.381 0.00 0.00 0.00 3.69
2960 3384 1.967779 GATGAACCCTAGCCTCCTCTC 59.032 57.143 0.00 0.00 0.00 3.20
2961 3385 0.032017 TGAACCCTAGCCTCCTCTCC 60.032 60.000 0.00 0.00 0.00 3.71
2962 3386 0.761323 GAACCCTAGCCTCCTCTCCC 60.761 65.000 0.00 0.00 0.00 4.30
2963 3387 2.202899 CCCTAGCCTCCTCTCCCC 59.797 72.222 0.00 0.00 0.00 4.81
2964 3388 2.203567 CCTAGCCTCCTCTCCCCG 60.204 72.222 0.00 0.00 0.00 5.73
2965 3389 2.915137 CTAGCCTCCTCTCCCCGC 60.915 72.222 0.00 0.00 0.00 6.13
2966 3390 3.430497 TAGCCTCCTCTCCCCGCT 61.430 66.667 0.00 0.00 0.00 5.52
2967 3391 3.438615 TAGCCTCCTCTCCCCGCTC 62.439 68.421 0.00 0.00 0.00 5.03
2969 3393 4.824515 CCTCCTCTCCCCGCTCGT 62.825 72.222 0.00 0.00 0.00 4.18
2970 3394 3.213402 CTCCTCTCCCCGCTCGTC 61.213 72.222 0.00 0.00 0.00 4.20
2971 3395 4.816984 TCCTCTCCCCGCTCGTCC 62.817 72.222 0.00 0.00 0.00 4.79
2972 3396 4.824515 CCTCTCCCCGCTCGTCCT 62.825 72.222 0.00 0.00 0.00 3.85
2973 3397 3.213402 CTCTCCCCGCTCGTCCTC 61.213 72.222 0.00 0.00 0.00 3.71
2974 3398 4.816984 TCTCCCCGCTCGTCCTCC 62.817 72.222 0.00 0.00 0.00 4.30
3016 3440 3.773154 GCCCTCTCCCCTCCCTCT 61.773 72.222 0.00 0.00 0.00 3.69
3017 3441 2.612251 CCCTCTCCCCTCCCTCTC 59.388 72.222 0.00 0.00 0.00 3.20
3018 3442 2.612251 CCTCTCCCCTCCCTCTCC 59.388 72.222 0.00 0.00 0.00 3.71
3019 3443 2.612251 CTCTCCCCTCCCTCTCCC 59.388 72.222 0.00 0.00 0.00 4.30
3020 3444 2.204624 TCTCCCCTCCCTCTCCCA 60.205 66.667 0.00 0.00 0.00 4.37
3021 3445 2.041405 CTCCCCTCCCTCTCCCAC 60.041 72.222 0.00 0.00 0.00 4.61
3022 3446 3.695825 TCCCCTCCCTCTCCCACC 61.696 72.222 0.00 0.00 0.00 4.61
3023 3447 4.825679 CCCCTCCCTCTCCCACCC 62.826 77.778 0.00 0.00 0.00 4.61
3024 3448 3.700350 CCCTCCCTCTCCCACCCT 61.700 72.222 0.00 0.00 0.00 4.34
3025 3449 2.041405 CCTCCCTCTCCCACCCTC 60.041 72.222 0.00 0.00 0.00 4.30
3026 3450 2.780693 CTCCCTCTCCCACCCTCA 59.219 66.667 0.00 0.00 0.00 3.86
3027 3451 1.382420 CTCCCTCTCCCACCCTCAG 60.382 68.421 0.00 0.00 0.00 3.35
3028 3452 1.862138 TCCCTCTCCCACCCTCAGA 60.862 63.158 0.00 0.00 0.00 3.27
3029 3453 1.687493 CCCTCTCCCACCCTCAGAC 60.687 68.421 0.00 0.00 0.00 3.51
3030 3454 1.687493 CCTCTCCCACCCTCAGACC 60.687 68.421 0.00 0.00 0.00 3.85
3031 3455 1.390125 CTCTCCCACCCTCAGACCT 59.610 63.158 0.00 0.00 0.00 3.85
3032 3456 0.252467 CTCTCCCACCCTCAGACCTT 60.252 60.000 0.00 0.00 0.00 3.50
3033 3457 0.545309 TCTCCCACCCTCAGACCTTG 60.545 60.000 0.00 0.00 0.00 3.61
3034 3458 2.190488 CTCCCACCCTCAGACCTTGC 62.190 65.000 0.00 0.00 0.00 4.01
3035 3459 2.352805 CCACCCTCAGACCTTGCC 59.647 66.667 0.00 0.00 0.00 4.52
3036 3460 2.046892 CACCCTCAGACCTTGCCG 60.047 66.667 0.00 0.00 0.00 5.69
3037 3461 4.021925 ACCCTCAGACCTTGCCGC 62.022 66.667 0.00 0.00 0.00 6.53
3038 3462 4.785453 CCCTCAGACCTTGCCGCC 62.785 72.222 0.00 0.00 0.00 6.13
3039 3463 4.785453 CCTCAGACCTTGCCGCCC 62.785 72.222 0.00 0.00 0.00 6.13
3040 3464 4.785453 CTCAGACCTTGCCGCCCC 62.785 72.222 0.00 0.00 0.00 5.80
3075 3499 4.436998 CGACGCCCCTCAGACCAC 62.437 72.222 0.00 0.00 0.00 4.16
3076 3500 4.436998 GACGCCCCTCAGACCACG 62.437 72.222 0.00 0.00 0.00 4.94
3094 3518 3.827898 CCGCGGTGGACCTCTCTC 61.828 72.222 19.50 0.00 42.00 3.20
3095 3519 3.827898 CGCGGTGGACCTCTCTCC 61.828 72.222 0.00 0.00 0.00 3.71
3096 3520 2.363147 GCGGTGGACCTCTCTCCT 60.363 66.667 0.00 0.00 0.00 3.69
3097 3521 2.419739 GCGGTGGACCTCTCTCCTC 61.420 68.421 0.00 0.00 0.00 3.71
3098 3522 1.755008 CGGTGGACCTCTCTCCTCC 60.755 68.421 0.00 0.00 39.66 4.30
3099 3523 1.382009 GGTGGACCTCTCTCCTCCC 60.382 68.421 0.00 0.00 37.83 4.30
3100 3524 1.382009 GTGGACCTCTCTCCTCCCC 60.382 68.421 0.00 0.00 0.00 4.81
3101 3525 2.123640 GGACCTCTCTCCTCCCCG 60.124 72.222 0.00 0.00 0.00 5.73
3102 3526 2.835895 GACCTCTCTCCTCCCCGC 60.836 72.222 0.00 0.00 0.00 6.13
3103 3527 4.467107 ACCTCTCTCCTCCCCGCC 62.467 72.222 0.00 0.00 0.00 6.13
3143 3567 3.770040 CCGTGGCCGATGACCTCA 61.770 66.667 0.00 0.00 35.63 3.86
3144 3568 2.264480 CGTGGCCGATGACCTCAA 59.736 61.111 0.00 0.00 35.63 3.02
3145 3569 1.153369 CGTGGCCGATGACCTCAAT 60.153 57.895 0.00 0.00 35.63 2.57
3146 3570 0.744414 CGTGGCCGATGACCTCAATT 60.744 55.000 0.00 0.00 35.63 2.32
3147 3571 1.472552 CGTGGCCGATGACCTCAATTA 60.473 52.381 0.00 0.00 35.63 1.40
3148 3572 2.806745 CGTGGCCGATGACCTCAATTAT 60.807 50.000 0.00 0.00 35.63 1.28
3149 3573 3.214328 GTGGCCGATGACCTCAATTATT 58.786 45.455 0.00 0.00 0.00 1.40
3150 3574 4.385825 GTGGCCGATGACCTCAATTATTA 58.614 43.478 0.00 0.00 0.00 0.98
3151 3575 5.003804 GTGGCCGATGACCTCAATTATTAT 58.996 41.667 0.00 0.00 0.00 1.28
3152 3576 5.473504 GTGGCCGATGACCTCAATTATTATT 59.526 40.000 0.00 0.00 0.00 1.40
3153 3577 6.653320 GTGGCCGATGACCTCAATTATTATTA 59.347 38.462 0.00 0.00 0.00 0.98
3154 3578 6.878923 TGGCCGATGACCTCAATTATTATTAG 59.121 38.462 0.00 0.00 0.00 1.73
3155 3579 6.183360 GGCCGATGACCTCAATTATTATTAGC 60.183 42.308 0.00 0.00 0.00 3.09
3156 3580 6.371548 GCCGATGACCTCAATTATTATTAGCA 59.628 38.462 0.00 0.00 0.00 3.49
3157 3581 7.094805 GCCGATGACCTCAATTATTATTAGCAA 60.095 37.037 0.00 0.00 0.00 3.91
3158 3582 8.783093 CCGATGACCTCAATTATTATTAGCAAA 58.217 33.333 0.00 0.00 0.00 3.68
3179 3603 9.700831 AGCAAAAATAATAGGGACTCACTAATT 57.299 29.630 0.00 0.00 41.75 1.40
3186 3610 9.824216 ATAATAGGGACTCACTAATTACTAGCA 57.176 33.333 0.00 0.00 41.75 3.49
3187 3611 8.548880 AATAGGGACTCACTAATTACTAGCAA 57.451 34.615 0.00 0.00 41.75 3.91
3188 3612 6.869206 AGGGACTCACTAATTACTAGCAAA 57.131 37.500 0.00 0.00 0.00 3.68
3189 3613 7.253905 AGGGACTCACTAATTACTAGCAAAA 57.746 36.000 0.00 0.00 0.00 2.44
3190 3614 7.686434 AGGGACTCACTAATTACTAGCAAAAA 58.314 34.615 0.00 0.00 0.00 1.94
3191 3615 8.329502 AGGGACTCACTAATTACTAGCAAAAAT 58.670 33.333 0.00 0.00 0.00 1.82
3192 3616 8.613482 GGGACTCACTAATTACTAGCAAAAATC 58.387 37.037 0.00 0.00 0.00 2.17
3193 3617 9.162764 GGACTCACTAATTACTAGCAAAAATCA 57.837 33.333 0.00 0.00 0.00 2.57
3195 3619 9.167311 ACTCACTAATTACTAGCAAAAATCAGG 57.833 33.333 0.00 0.00 0.00 3.86
3196 3620 9.383519 CTCACTAATTACTAGCAAAAATCAGGA 57.616 33.333 0.00 0.00 0.00 3.86
3197 3621 9.905713 TCACTAATTACTAGCAAAAATCAGGAT 57.094 29.630 0.00 0.00 0.00 3.24
3199 3623 9.905713 ACTAATTACTAGCAAAAATCAGGATCA 57.094 29.630 0.00 0.00 0.00 2.92
3202 3626 8.814038 ATTACTAGCAAAAATCAGGATCAAGT 57.186 30.769 0.00 0.00 0.00 3.16
3203 3627 6.506500 ACTAGCAAAAATCAGGATCAAGTG 57.493 37.500 0.00 0.00 0.00 3.16
3204 3628 4.184079 AGCAAAAATCAGGATCAAGTGC 57.816 40.909 0.00 0.00 0.00 4.40
3205 3629 3.575256 AGCAAAAATCAGGATCAAGTGCA 59.425 39.130 0.00 0.00 31.95 4.57
3206 3630 3.924686 GCAAAAATCAGGATCAAGTGCAG 59.075 43.478 0.00 0.00 0.00 4.41
3207 3631 4.491676 CAAAAATCAGGATCAAGTGCAGG 58.508 43.478 0.00 0.00 0.00 4.85
3208 3632 1.760192 AATCAGGATCAAGTGCAGGC 58.240 50.000 0.00 0.00 0.00 4.85
3209 3633 0.917533 ATCAGGATCAAGTGCAGGCT 59.082 50.000 0.00 0.00 0.00 4.58
3210 3634 0.694771 TCAGGATCAAGTGCAGGCTT 59.305 50.000 0.00 0.00 0.00 4.35
3211 3635 1.908619 TCAGGATCAAGTGCAGGCTTA 59.091 47.619 0.00 0.00 0.00 3.09
3212 3636 2.305635 TCAGGATCAAGTGCAGGCTTAA 59.694 45.455 0.00 0.00 0.00 1.85
3213 3637 3.054139 TCAGGATCAAGTGCAGGCTTAAT 60.054 43.478 0.00 0.00 0.00 1.40
3214 3638 3.698040 CAGGATCAAGTGCAGGCTTAATT 59.302 43.478 0.00 0.00 0.00 1.40
3215 3639 4.159135 CAGGATCAAGTGCAGGCTTAATTT 59.841 41.667 0.00 0.00 0.00 1.82
3216 3640 4.774200 AGGATCAAGTGCAGGCTTAATTTT 59.226 37.500 0.00 0.00 0.00 1.82
3217 3641 5.105063 GGATCAAGTGCAGGCTTAATTTTC 58.895 41.667 0.00 0.00 0.00 2.29
3218 3642 5.105595 GGATCAAGTGCAGGCTTAATTTTCT 60.106 40.000 0.00 0.00 0.00 2.52
3219 3643 5.125100 TCAAGTGCAGGCTTAATTTTCTG 57.875 39.130 0.00 0.00 0.00 3.02
3220 3644 4.584325 TCAAGTGCAGGCTTAATTTTCTGT 59.416 37.500 0.00 0.00 0.00 3.41
3221 3645 5.068987 TCAAGTGCAGGCTTAATTTTCTGTT 59.931 36.000 0.00 0.00 0.00 3.16
3222 3646 6.264292 TCAAGTGCAGGCTTAATTTTCTGTTA 59.736 34.615 0.00 0.00 0.00 2.41
3223 3647 6.013842 AGTGCAGGCTTAATTTTCTGTTAC 57.986 37.500 0.00 0.00 0.00 2.50
3224 3648 5.534654 AGTGCAGGCTTAATTTTCTGTTACA 59.465 36.000 0.00 0.00 0.00 2.41
3225 3649 6.209391 AGTGCAGGCTTAATTTTCTGTTACAT 59.791 34.615 0.00 0.00 0.00 2.29
3226 3650 6.308766 GTGCAGGCTTAATTTTCTGTTACATG 59.691 38.462 0.00 0.00 0.00 3.21
3227 3651 6.015519 TGCAGGCTTAATTTTCTGTTACATGT 60.016 34.615 2.69 2.69 0.00 3.21
3228 3652 6.868339 GCAGGCTTAATTTTCTGTTACATGTT 59.132 34.615 2.30 0.00 0.00 2.71
3229 3653 8.026607 GCAGGCTTAATTTTCTGTTACATGTTA 58.973 33.333 2.30 0.00 0.00 2.41
3230 3654 9.906660 CAGGCTTAATTTTCTGTTACATGTTAA 57.093 29.630 2.30 0.00 0.00 2.01
3232 3656 9.353999 GGCTTAATTTTCTGTTACATGTTAAGG 57.646 33.333 2.30 0.00 31.80 2.69
3238 3662 7.921786 TTTCTGTTACATGTTAAGGATGAGG 57.078 36.000 2.30 0.00 0.00 3.86
3239 3663 5.428253 TCTGTTACATGTTAAGGATGAGGC 58.572 41.667 2.30 0.00 0.00 4.70
3240 3664 4.523083 TGTTACATGTTAAGGATGAGGCC 58.477 43.478 2.30 0.00 0.00 5.19
3241 3665 4.227300 TGTTACATGTTAAGGATGAGGCCT 59.773 41.667 3.86 3.86 40.93 5.19
3242 3666 3.567478 ACATGTTAAGGATGAGGCCTC 57.433 47.619 26.78 26.78 37.26 4.70
3243 3667 2.846206 ACATGTTAAGGATGAGGCCTCA 59.154 45.455 36.73 36.73 44.59 3.86
3244 3668 3.266772 ACATGTTAAGGATGAGGCCTCAA 59.733 43.478 38.02 19.75 43.58 3.02
3245 3669 4.079558 ACATGTTAAGGATGAGGCCTCAAT 60.080 41.667 38.02 25.42 43.58 2.57
3246 3670 4.591321 TGTTAAGGATGAGGCCTCAATT 57.409 40.909 38.02 30.55 43.58 2.32
3247 3671 5.708736 TGTTAAGGATGAGGCCTCAATTA 57.291 39.130 38.02 29.59 43.58 1.40
3248 3672 6.266131 TGTTAAGGATGAGGCCTCAATTAT 57.734 37.500 38.02 22.81 43.58 1.28
3249 3673 6.672593 TGTTAAGGATGAGGCCTCAATTATT 58.327 36.000 38.02 28.34 43.58 1.40
3250 3674 7.811282 TGTTAAGGATGAGGCCTCAATTATTA 58.189 34.615 38.02 27.41 43.58 0.98
3251 3675 8.448008 TGTTAAGGATGAGGCCTCAATTATTAT 58.552 33.333 38.02 20.82 43.58 1.28
3252 3676 9.301897 GTTAAGGATGAGGCCTCAATTATTATT 57.698 33.333 38.02 24.65 43.58 1.40
3253 3677 9.520515 TTAAGGATGAGGCCTCAATTATTATTC 57.479 33.333 38.02 26.29 43.58 1.75
3254 3678 7.340531 AGGATGAGGCCTCAATTATTATTCT 57.659 36.000 38.02 21.23 43.58 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
524 583 2.285083 CCCAAATCGCCGACTGATTTA 58.715 47.619 0.00 0.00 42.53 1.40
528 587 2.119484 AACCCCAAATCGCCGACTGA 62.119 55.000 0.00 0.00 0.00 3.41
556 615 4.981794 AGCATAAAACTACCACAATTCGC 58.018 39.130 0.00 0.00 0.00 4.70
574 640 9.672673 ACAGTGTGAATTTAGAGTAAATAGCAT 57.327 29.630 0.00 0.00 37.39 3.79
579 645 9.998106 ACAGTACAGTGTGAATTTAGAGTAAAT 57.002 29.630 5.88 0.00 39.92 1.40
649 715 0.834687 TCCCGGTGGCTACTTTGAGT 60.835 55.000 0.00 0.00 0.00 3.41
683 757 5.126545 ACCACGAGTGTTCTTATGCTATGTA 59.873 40.000 2.36 0.00 0.00 2.29
685 759 4.433615 ACCACGAGTGTTCTTATGCTATG 58.566 43.478 2.36 0.00 0.00 2.23
687 761 3.762288 AGACCACGAGTGTTCTTATGCTA 59.238 43.478 0.00 0.00 27.12 3.49
692 767 1.000506 GGCAGACCACGAGTGTTCTTA 59.999 52.381 0.39 0.00 29.45 2.10
694 769 1.115930 AGGCAGACCACGAGTGTTCT 61.116 55.000 0.00 0.00 39.06 3.01
697 772 1.267121 AATAGGCAGACCACGAGTGT 58.733 50.000 2.36 0.00 39.06 3.55
868 947 6.125979 ACTGGGCTTCTCCGGGTATATATATA 60.126 42.308 0.00 0.00 37.50 0.86
869 948 5.148502 CTGGGCTTCTCCGGGTATATATAT 58.851 45.833 0.00 0.00 34.94 0.86
903 988 1.196012 GGAGAAGTAGAGGGGTGTGG 58.804 60.000 0.00 0.00 0.00 4.17
931 1029 1.970114 TGTGGTCGACCGAGGACTC 60.970 63.158 28.70 12.99 39.43 3.36
932 1030 2.114625 TGTGGTCGACCGAGGACT 59.885 61.111 28.70 0.00 39.43 3.85
933 1031 2.257676 GTGTGGTCGACCGAGGAC 59.742 66.667 28.70 21.03 39.43 3.85
934 1032 3.359523 CGTGTGGTCGACCGAGGA 61.360 66.667 28.70 9.32 39.43 3.71
935 1033 3.324099 CTCGTGTGGTCGACCGAGG 62.324 68.421 28.70 21.70 39.64 4.63
936 1034 1.645704 ATCTCGTGTGGTCGACCGAG 61.646 60.000 28.70 27.22 42.28 4.63
937 1035 1.642037 GATCTCGTGTGGTCGACCGA 61.642 60.000 28.70 20.11 39.43 4.69
938 1036 1.226323 GATCTCGTGTGGTCGACCG 60.226 63.158 28.70 16.97 39.43 4.79
939 1037 1.226323 CGATCTCGTGTGGTCGACC 60.226 63.158 28.17 28.17 36.25 4.79
1191 1298 0.250467 ACTCGTTGTGCTGCAGGAAT 60.250 50.000 17.12 0.00 0.00 3.01
1470 1589 3.083349 CCAGGCCCGTGGATCTCA 61.083 66.667 5.01 0.00 40.44 3.27
1512 1631 1.557269 GGAGGTCATGAGCACCCTGT 61.557 60.000 25.57 5.99 34.22 4.00
1786 1905 1.300233 GACGATGAGGCCGGTGATC 60.300 63.158 1.90 0.00 0.00 2.92
1957 2076 3.726517 ATGCACACGAACAGCGCC 61.727 61.111 2.29 0.00 46.04 6.53
2346 2469 4.643463 TCTTTTGTACGGTTCTGGCATAA 58.357 39.130 0.00 0.00 0.00 1.90
2359 2482 7.649306 AGTGTGAAATTTGATGCTCTTTTGTAC 59.351 33.333 0.00 0.00 0.00 2.90
2360 2483 7.715657 AGTGTGAAATTTGATGCTCTTTTGTA 58.284 30.769 0.00 0.00 0.00 2.41
2429 2552 8.952278 TGTCTAAAAATATTGTCGGCAAAGTAT 58.048 29.630 6.51 0.00 38.21 2.12
2496 2619 6.763715 ACTCCAATTATTGCCAGAGGTATA 57.236 37.500 12.07 0.00 0.00 1.47
2497 2620 5.653255 ACTCCAATTATTGCCAGAGGTAT 57.347 39.130 12.07 0.00 0.00 2.73
2498 2621 6.157994 AGTTACTCCAATTATTGCCAGAGGTA 59.842 38.462 12.07 3.20 0.00 3.08
2499 2622 5.044846 AGTTACTCCAATTATTGCCAGAGGT 60.045 40.000 12.07 3.86 0.00 3.85
2500 2623 5.440610 AGTTACTCCAATTATTGCCAGAGG 58.559 41.667 12.07 0.00 0.00 3.69
2501 2624 7.770897 ACTAAGTTACTCCAATTATTGCCAGAG 59.229 37.037 0.00 4.09 0.00 3.35
2502 2625 7.630082 ACTAAGTTACTCCAATTATTGCCAGA 58.370 34.615 0.00 0.00 0.00 3.86
2503 2626 7.865706 ACTAAGTTACTCCAATTATTGCCAG 57.134 36.000 0.00 0.51 0.00 4.85
2504 2627 9.391006 CTTACTAAGTTACTCCAATTATTGCCA 57.609 33.333 0.00 0.00 0.00 4.92
2505 2628 8.343366 GCTTACTAAGTTACTCCAATTATTGCC 58.657 37.037 0.00 0.00 0.00 4.52
2506 2629 8.889717 TGCTTACTAAGTTACTCCAATTATTGC 58.110 33.333 0.00 0.00 0.00 3.56
2512 2635 7.068348 TCGAGATGCTTACTAAGTTACTCCAAT 59.932 37.037 0.00 0.00 0.00 3.16
2521 2644 2.033550 CGGCTCGAGATGCTTACTAAGT 59.966 50.000 18.75 0.00 0.00 2.24
2522 2645 2.290916 TCGGCTCGAGATGCTTACTAAG 59.709 50.000 18.75 0.00 0.00 2.18
2523 2646 2.294979 TCGGCTCGAGATGCTTACTAA 58.705 47.619 18.75 0.00 0.00 2.24
2524 2647 1.963172 TCGGCTCGAGATGCTTACTA 58.037 50.000 18.75 0.00 0.00 1.82
2525 2648 1.103803 TTCGGCTCGAGATGCTTACT 58.896 50.000 18.75 0.00 37.14 2.24
2526 2649 1.588861 GTTTCGGCTCGAGATGCTTAC 59.411 52.381 18.75 2.47 37.14 2.34
2527 2650 1.476891 AGTTTCGGCTCGAGATGCTTA 59.523 47.619 18.75 0.00 37.14 3.09
2528 2651 0.247736 AGTTTCGGCTCGAGATGCTT 59.752 50.000 18.75 0.00 37.14 3.91
2529 2652 0.247736 AAGTTTCGGCTCGAGATGCT 59.752 50.000 18.75 1.62 37.14 3.79
2530 2653 0.647925 GAAGTTTCGGCTCGAGATGC 59.352 55.000 18.75 0.54 37.14 3.91
2531 2654 1.996292 TGAAGTTTCGGCTCGAGATG 58.004 50.000 18.75 7.36 37.14 2.90
2532 2655 2.743636 TTGAAGTTTCGGCTCGAGAT 57.256 45.000 18.75 0.00 37.14 2.75
2533 2656 2.519377 TTTGAAGTTTCGGCTCGAGA 57.481 45.000 18.75 0.00 37.14 4.04
2534 2657 3.813529 AATTTGAAGTTTCGGCTCGAG 57.186 42.857 8.45 8.45 37.14 4.04
2535 2658 4.378046 GCTAAATTTGAAGTTTCGGCTCGA 60.378 41.667 0.00 0.00 0.00 4.04
2536 2659 3.846335 GCTAAATTTGAAGTTTCGGCTCG 59.154 43.478 0.00 0.00 0.00 5.03
2537 2660 4.166523 GGCTAAATTTGAAGTTTCGGCTC 58.833 43.478 0.00 0.00 0.00 4.70
2549 2672 5.010012 ACACAACAGAGAAGGGCTAAATTTG 59.990 40.000 0.00 0.00 0.00 2.32
2554 2677 3.391296 AGAACACAACAGAGAAGGGCTAA 59.609 43.478 0.00 0.00 0.00 3.09
2561 2684 5.471797 TGAACAACAAGAACACAACAGAGAA 59.528 36.000 0.00 0.00 0.00 2.87
2562 2685 5.000591 TGAACAACAAGAACACAACAGAGA 58.999 37.500 0.00 0.00 0.00 3.10
2564 2687 5.647658 AGATGAACAACAAGAACACAACAGA 59.352 36.000 0.00 0.00 0.00 3.41
2566 2689 5.163663 GGAGATGAACAACAAGAACACAACA 60.164 40.000 0.00 0.00 0.00 3.33
2567 2690 5.066505 AGGAGATGAACAACAAGAACACAAC 59.933 40.000 0.00 0.00 0.00 3.32
2569 2692 4.780815 AGGAGATGAACAACAAGAACACA 58.219 39.130 0.00 0.00 0.00 3.72
2570 2693 5.757850 AAGGAGATGAACAACAAGAACAC 57.242 39.130 0.00 0.00 0.00 3.32
2571 2694 6.998074 ACATAAGGAGATGAACAACAAGAACA 59.002 34.615 0.00 0.00 0.00 3.18
2572 2695 7.440523 ACATAAGGAGATGAACAACAAGAAC 57.559 36.000 0.00 0.00 0.00 3.01
2573 2696 7.719193 TGAACATAAGGAGATGAACAACAAGAA 59.281 33.333 0.00 0.00 0.00 2.52
2574 2697 7.173218 GTGAACATAAGGAGATGAACAACAAGA 59.827 37.037 0.00 0.00 0.00 3.02
2576 2699 6.206634 GGTGAACATAAGGAGATGAACAACAA 59.793 38.462 0.00 0.00 0.00 2.83
2578 2701 5.705441 TGGTGAACATAAGGAGATGAACAAC 59.295 40.000 0.00 0.00 0.00 3.32
2579 2702 5.875224 TGGTGAACATAAGGAGATGAACAA 58.125 37.500 0.00 0.00 0.00 2.83
2580 2703 5.497464 TGGTGAACATAAGGAGATGAACA 57.503 39.130 0.00 0.00 0.00 3.18
2581 2704 8.398665 GTTAATGGTGAACATAAGGAGATGAAC 58.601 37.037 0.00 0.00 39.40 3.18
2583 2706 7.552687 GTGTTAATGGTGAACATAAGGAGATGA 59.447 37.037 0.00 0.00 39.40 2.92
2620 3044 6.978659 TGTACAGTGTAAAGAAGTCAACAGAG 59.021 38.462 4.11 0.00 0.00 3.35
2621 3045 6.755141 GTGTACAGTGTAAAGAAGTCAACAGA 59.245 38.462 4.11 0.00 0.00 3.41
2636 3060 9.826574 TTAAGAGAATAAACAAGTGTACAGTGT 57.173 29.630 3.39 5.12 0.00 3.55
2664 3088 7.095144 TGCAATGTTCAAATTTTCTGCATTAGG 60.095 33.333 0.00 0.00 0.00 2.69
2671 3095 6.647481 TCTGGATGCAATGTTCAAATTTTCTG 59.353 34.615 0.00 0.00 0.00 3.02
2673 3097 7.424227 TTCTGGATGCAATGTTCAAATTTTC 57.576 32.000 0.00 0.00 0.00 2.29
2678 3102 5.273674 TGTTTCTGGATGCAATGTTCAAA 57.726 34.783 0.00 0.00 0.00 2.69
2686 3110 4.206375 TGAGTTCTTGTTTCTGGATGCAA 58.794 39.130 0.00 0.00 0.00 4.08
2722 3146 0.673437 AGCTCTAATCGCTGAGGAGC 59.327 55.000 15.50 15.50 46.54 4.70
2723 3147 2.622942 AGAAGCTCTAATCGCTGAGGAG 59.377 50.000 0.00 0.00 37.87 3.69
2724 3148 2.621055 GAGAAGCTCTAATCGCTGAGGA 59.379 50.000 0.00 0.00 37.87 3.71
2725 3149 2.604373 CGAGAAGCTCTAATCGCTGAGG 60.604 54.545 0.00 0.00 37.87 3.86
2726 3150 2.604373 CCGAGAAGCTCTAATCGCTGAG 60.604 54.545 0.00 0.00 37.87 3.35
2727 3151 1.335182 CCGAGAAGCTCTAATCGCTGA 59.665 52.381 0.00 0.00 37.87 4.26
2728 3152 1.764851 CCGAGAAGCTCTAATCGCTG 58.235 55.000 0.00 0.00 37.87 5.18
2729 3153 0.031449 GCCGAGAAGCTCTAATCGCT 59.969 55.000 0.00 0.00 39.94 4.93
2730 3154 0.941936 GGCCGAGAAGCTCTAATCGC 60.942 60.000 0.00 0.00 33.94 4.58
2731 3155 0.661780 CGGCCGAGAAGCTCTAATCG 60.662 60.000 24.07 0.00 35.02 3.34
2732 3156 0.386113 ACGGCCGAGAAGCTCTAATC 59.614 55.000 35.90 0.00 0.00 1.75
2733 3157 0.386113 GACGGCCGAGAAGCTCTAAT 59.614 55.000 35.90 3.54 0.00 1.73
2734 3158 1.664321 GGACGGCCGAGAAGCTCTAA 61.664 60.000 35.90 0.00 0.00 2.10
2735 3159 2.119655 GGACGGCCGAGAAGCTCTA 61.120 63.158 35.90 0.00 0.00 2.43
2736 3160 3.453679 GGACGGCCGAGAAGCTCT 61.454 66.667 35.90 6.14 0.00 4.09
2746 3170 2.458610 GGAAAACGATCGGACGGCC 61.459 63.158 20.98 0.00 37.61 6.13
2747 3171 1.447314 AGGAAAACGATCGGACGGC 60.447 57.895 20.98 4.45 37.61 5.68
2748 3172 0.108992 TCAGGAAAACGATCGGACGG 60.109 55.000 20.98 5.44 37.61 4.79
2749 3173 1.588404 CATCAGGAAAACGATCGGACG 59.412 52.381 20.98 0.00 39.31 4.79
2750 3174 1.327764 GCATCAGGAAAACGATCGGAC 59.672 52.381 20.98 7.26 0.00 4.79
2751 3175 1.651987 GCATCAGGAAAACGATCGGA 58.348 50.000 20.98 5.21 0.00 4.55
2752 3176 0.301687 CGCATCAGGAAAACGATCGG 59.698 55.000 20.98 1.23 0.00 4.18
2753 3177 1.277326 TCGCATCAGGAAAACGATCG 58.723 50.000 14.88 14.88 0.00 3.69
2754 3178 3.303395 GGAATCGCATCAGGAAAACGATC 60.303 47.826 0.00 0.00 42.19 3.69
2755 3179 2.614057 GGAATCGCATCAGGAAAACGAT 59.386 45.455 0.00 0.00 44.68 3.73
2756 3180 2.006888 GGAATCGCATCAGGAAAACGA 58.993 47.619 0.00 0.00 37.15 3.85
2757 3181 1.737236 TGGAATCGCATCAGGAAAACG 59.263 47.619 0.00 0.00 0.00 3.60
2758 3182 2.478539 GCTGGAATCGCATCAGGAAAAC 60.479 50.000 0.00 0.00 0.00 2.43
2759 3183 1.745087 GCTGGAATCGCATCAGGAAAA 59.255 47.619 0.00 0.00 0.00 2.29
2760 3184 1.382522 GCTGGAATCGCATCAGGAAA 58.617 50.000 0.00 0.00 0.00 3.13
2761 3185 0.464373 GGCTGGAATCGCATCAGGAA 60.464 55.000 0.00 0.00 0.00 3.36
2762 3186 1.146930 GGCTGGAATCGCATCAGGA 59.853 57.895 0.00 0.00 0.00 3.86
2763 3187 2.249535 CGGCTGGAATCGCATCAGG 61.250 63.158 0.00 0.00 0.00 3.86
2764 3188 1.091771 AACGGCTGGAATCGCATCAG 61.092 55.000 0.00 0.00 0.00 2.90
2765 3189 1.078497 AACGGCTGGAATCGCATCA 60.078 52.632 0.00 0.00 0.00 3.07
2766 3190 1.353103 CAACGGCTGGAATCGCATC 59.647 57.895 0.00 0.00 0.00 3.91
2767 3191 3.501396 CAACGGCTGGAATCGCAT 58.499 55.556 0.00 0.00 0.00 4.73
2776 3200 2.202932 CCCGAGATCCAACGGCTG 60.203 66.667 15.16 0.00 46.59 4.85
2777 3201 4.162690 GCCCGAGATCCAACGGCT 62.163 66.667 15.16 0.00 46.59 5.52
2778 3202 4.162690 AGCCCGAGATCCAACGGC 62.163 66.667 15.16 9.58 46.59 5.68
2780 3204 2.278857 CGAGCCCGAGATCCAACG 60.279 66.667 0.00 0.00 38.22 4.10
2781 3205 2.107141 CCGAGCCCGAGATCCAAC 59.893 66.667 0.00 0.00 38.22 3.77
2782 3206 3.849951 GCCGAGCCCGAGATCCAA 61.850 66.667 0.00 0.00 38.22 3.53
2783 3207 4.841617 AGCCGAGCCCGAGATCCA 62.842 66.667 0.00 0.00 38.22 3.41
2784 3208 3.984749 GAGCCGAGCCCGAGATCC 61.985 72.222 0.00 0.00 38.22 3.36
2785 3209 3.219928 TGAGCCGAGCCCGAGATC 61.220 66.667 0.00 0.00 38.22 2.75
2786 3210 3.532155 GTGAGCCGAGCCCGAGAT 61.532 66.667 0.00 0.00 38.22 2.75
2791 3215 4.803426 CTCACGTGAGCCGAGCCC 62.803 72.222 31.00 0.00 40.70 5.19
2792 3216 4.803426 CCTCACGTGAGCCGAGCC 62.803 72.222 35.09 0.00 40.75 4.70
2804 3228 2.223876 TGGTAAATATCCGACGCCTCAC 60.224 50.000 0.00 0.00 0.00 3.51
2805 3229 2.033372 TGGTAAATATCCGACGCCTCA 58.967 47.619 0.00 0.00 0.00 3.86
2806 3230 2.295349 TCTGGTAAATATCCGACGCCTC 59.705 50.000 0.00 0.00 0.00 4.70
2807 3231 2.313317 TCTGGTAAATATCCGACGCCT 58.687 47.619 0.00 0.00 0.00 5.52
2808 3232 2.806608 TCTGGTAAATATCCGACGCC 57.193 50.000 0.00 0.00 0.00 5.68
2809 3233 2.915463 CGATCTGGTAAATATCCGACGC 59.085 50.000 0.00 0.00 0.00 5.19
2810 3234 2.915463 GCGATCTGGTAAATATCCGACG 59.085 50.000 0.00 0.00 0.00 5.12
2811 3235 3.921021 CAGCGATCTGGTAAATATCCGAC 59.079 47.826 0.00 0.00 36.68 4.79
2812 3236 3.572682 ACAGCGATCTGGTAAATATCCGA 59.427 43.478 0.00 0.00 44.54 4.55
2813 3237 3.675225 CACAGCGATCTGGTAAATATCCG 59.325 47.826 0.00 0.00 44.54 4.18
2814 3238 4.883083 TCACAGCGATCTGGTAAATATCC 58.117 43.478 0.00 0.00 44.54 2.59
2815 3239 4.387256 GCTCACAGCGATCTGGTAAATATC 59.613 45.833 0.00 0.00 44.54 1.63
2816 3240 4.310769 GCTCACAGCGATCTGGTAAATAT 58.689 43.478 0.00 0.00 44.54 1.28
2817 3241 3.492656 GGCTCACAGCGATCTGGTAAATA 60.493 47.826 0.00 0.00 43.62 1.40
2818 3242 2.555199 GCTCACAGCGATCTGGTAAAT 58.445 47.619 0.00 0.00 44.54 1.40
2819 3243 1.405526 GGCTCACAGCGATCTGGTAAA 60.406 52.381 0.00 0.00 43.62 2.01
2820 3244 0.175760 GGCTCACAGCGATCTGGTAA 59.824 55.000 0.00 0.00 43.62 2.85
2821 3245 1.816537 GGCTCACAGCGATCTGGTA 59.183 57.895 0.00 0.00 43.62 3.25
2822 3246 2.581354 GGCTCACAGCGATCTGGT 59.419 61.111 0.00 0.00 43.62 4.00
2823 3247 2.584418 CGGCTCACAGCGATCTGG 60.584 66.667 0.00 0.00 43.62 3.86
2824 3248 1.875813 GACGGCTCACAGCGATCTG 60.876 63.158 0.00 0.00 43.62 2.90
2825 3249 2.492090 GACGGCTCACAGCGATCT 59.508 61.111 0.00 0.00 43.62 2.75
2826 3250 2.951745 CGACGGCTCACAGCGATC 60.952 66.667 0.00 0.00 43.62 3.69
2827 3251 4.498520 CCGACGGCTCACAGCGAT 62.499 66.667 0.00 0.00 43.62 4.58
2829 3253 2.607668 TTATCCGACGGCTCACAGCG 62.608 60.000 9.66 0.00 43.62 5.18
2830 3254 0.459585 TTTATCCGACGGCTCACAGC 60.460 55.000 9.66 0.00 41.46 4.40
2831 3255 2.004583 TTTTATCCGACGGCTCACAG 57.995 50.000 9.66 0.00 0.00 3.66
2832 3256 2.684001 ATTTTATCCGACGGCTCACA 57.316 45.000 9.66 0.00 0.00 3.58
2833 3257 2.287103 GGAATTTTATCCGACGGCTCAC 59.713 50.000 9.66 0.00 0.00 3.51
2834 3258 2.093394 TGGAATTTTATCCGACGGCTCA 60.093 45.455 9.66 0.00 42.76 4.26
2835 3259 2.557317 TGGAATTTTATCCGACGGCTC 58.443 47.619 9.66 0.00 42.76 4.70
2836 3260 2.702592 TGGAATTTTATCCGACGGCT 57.297 45.000 9.66 1.10 42.76 5.52
2837 3261 3.550030 CCATTGGAATTTTATCCGACGGC 60.550 47.826 9.66 0.00 42.76 5.68
2838 3262 3.550030 GCCATTGGAATTTTATCCGACGG 60.550 47.826 7.84 7.84 42.76 4.79
2839 3263 3.066064 TGCCATTGGAATTTTATCCGACG 59.934 43.478 6.95 0.00 42.76 5.12
2840 3264 4.647424 TGCCATTGGAATTTTATCCGAC 57.353 40.909 6.95 0.00 42.76 4.79
2841 3265 4.464244 TGTTGCCATTGGAATTTTATCCGA 59.536 37.500 6.95 0.00 42.76 4.55
2842 3266 4.753233 TGTTGCCATTGGAATTTTATCCG 58.247 39.130 6.95 0.00 42.76 4.18
2843 3267 5.976458 TCTGTTGCCATTGGAATTTTATCC 58.024 37.500 6.95 0.00 40.10 2.59
2844 3268 7.550196 ACATTCTGTTGCCATTGGAATTTTATC 59.450 33.333 6.95 0.00 0.00 1.75
2845 3269 7.396418 ACATTCTGTTGCCATTGGAATTTTAT 58.604 30.769 6.95 0.00 0.00 1.40
2846 3270 6.767456 ACATTCTGTTGCCATTGGAATTTTA 58.233 32.000 6.95 0.00 0.00 1.52
2847 3271 5.623169 ACATTCTGTTGCCATTGGAATTTT 58.377 33.333 6.95 0.00 0.00 1.82
2848 3272 5.231702 ACATTCTGTTGCCATTGGAATTT 57.768 34.783 6.95 0.00 0.00 1.82
2849 3273 4.895668 ACATTCTGTTGCCATTGGAATT 57.104 36.364 6.95 0.00 0.00 2.17
2850 3274 5.999205 TTACATTCTGTTGCCATTGGAAT 57.001 34.783 6.95 0.00 0.00 3.01
2851 3275 5.798125 TTTACATTCTGTTGCCATTGGAA 57.202 34.783 6.95 0.00 0.00 3.53
2852 3276 5.999205 ATTTACATTCTGTTGCCATTGGA 57.001 34.783 6.95 0.00 0.00 3.53
2853 3277 5.743398 CGTATTTACATTCTGTTGCCATTGG 59.257 40.000 0.00 0.00 0.00 3.16
2854 3278 5.743398 CCGTATTTACATTCTGTTGCCATTG 59.257 40.000 0.00 0.00 0.00 2.82
2855 3279 5.417580 ACCGTATTTACATTCTGTTGCCATT 59.582 36.000 0.00 0.00 0.00 3.16
2856 3280 4.947388 ACCGTATTTACATTCTGTTGCCAT 59.053 37.500 0.00 0.00 0.00 4.40
2857 3281 4.155099 CACCGTATTTACATTCTGTTGCCA 59.845 41.667 0.00 0.00 0.00 4.92
2858 3282 4.658071 CACCGTATTTACATTCTGTTGCC 58.342 43.478 0.00 0.00 0.00 4.52
2859 3283 4.095610 GCACCGTATTTACATTCTGTTGC 58.904 43.478 0.00 0.00 0.00 4.17
2860 3284 4.438200 GGGCACCGTATTTACATTCTGTTG 60.438 45.833 0.00 0.00 40.86 3.33
2861 3285 3.692593 GGGCACCGTATTTACATTCTGTT 59.307 43.478 0.00 0.00 40.86 3.16
2862 3286 3.275999 GGGCACCGTATTTACATTCTGT 58.724 45.455 0.00 0.00 40.86 3.41
2863 3287 3.963383 GGGCACCGTATTTACATTCTG 57.037 47.619 0.00 0.00 40.86 3.02
2884 3308 2.035626 ACCGAAATGCCCTGGTGG 59.964 61.111 0.00 0.00 32.33 4.61
2885 3309 0.680921 ATGACCGAAATGCCCTGGTG 60.681 55.000 0.00 0.00 34.12 4.17
2886 3310 0.039618 AATGACCGAAATGCCCTGGT 59.960 50.000 0.00 0.00 37.44 4.00
2887 3311 1.134946 GAAATGACCGAAATGCCCTGG 59.865 52.381 0.00 0.00 0.00 4.45
2888 3312 1.202177 CGAAATGACCGAAATGCCCTG 60.202 52.381 0.00 0.00 0.00 4.45
2889 3313 1.094785 CGAAATGACCGAAATGCCCT 58.905 50.000 0.00 0.00 0.00 5.19
2890 3314 0.525455 GCGAAATGACCGAAATGCCC 60.525 55.000 0.00 0.00 0.00 5.36
2891 3315 0.861450 CGCGAAATGACCGAAATGCC 60.861 55.000 0.00 0.00 0.00 4.40
2892 3316 0.179200 ACGCGAAATGACCGAAATGC 60.179 50.000 15.93 0.00 0.00 3.56
2893 3317 2.285602 CCTACGCGAAATGACCGAAATG 60.286 50.000 15.93 0.00 0.00 2.32
2894 3318 1.931172 CCTACGCGAAATGACCGAAAT 59.069 47.619 15.93 0.00 0.00 2.17
2895 3319 1.352114 CCTACGCGAAATGACCGAAA 58.648 50.000 15.93 0.00 0.00 3.46
2896 3320 0.458889 CCCTACGCGAAATGACCGAA 60.459 55.000 15.93 0.00 0.00 4.30
2897 3321 1.140161 CCCTACGCGAAATGACCGA 59.860 57.895 15.93 0.00 0.00 4.69
2898 3322 1.881252 CCCCTACGCGAAATGACCG 60.881 63.158 15.93 0.00 0.00 4.79
2899 3323 1.523032 CCCCCTACGCGAAATGACC 60.523 63.158 15.93 0.00 0.00 4.02
2900 3324 0.461135 TACCCCCTACGCGAAATGAC 59.539 55.000 15.93 0.00 0.00 3.06
2901 3325 1.416243 ATACCCCCTACGCGAAATGA 58.584 50.000 15.93 0.00 0.00 2.57
2902 3326 3.389925 TTATACCCCCTACGCGAAATG 57.610 47.619 15.93 0.00 0.00 2.32
2903 3327 4.383173 CTTTTATACCCCCTACGCGAAAT 58.617 43.478 15.93 0.00 0.00 2.17
2904 3328 3.432046 CCTTTTATACCCCCTACGCGAAA 60.432 47.826 15.93 0.00 0.00 3.46
2905 3329 2.102925 CCTTTTATACCCCCTACGCGAA 59.897 50.000 15.93 0.00 0.00 4.70
2906 3330 1.688197 CCTTTTATACCCCCTACGCGA 59.312 52.381 15.93 0.00 0.00 5.87
2907 3331 1.270465 CCCTTTTATACCCCCTACGCG 60.270 57.143 3.53 3.53 0.00 6.01
2908 3332 1.072806 CCCCTTTTATACCCCCTACGC 59.927 57.143 0.00 0.00 0.00 4.42
2909 3333 1.701292 CCCCCTTTTATACCCCCTACG 59.299 57.143 0.00 0.00 0.00 3.51
2910 3334 1.426598 GCCCCCTTTTATACCCCCTAC 59.573 57.143 0.00 0.00 0.00 3.18
2911 3335 1.703234 GGCCCCCTTTTATACCCCCTA 60.703 57.143 0.00 0.00 0.00 3.53
2912 3336 1.002794 GGCCCCCTTTTATACCCCCT 61.003 60.000 0.00 0.00 0.00 4.79
2913 3337 1.298157 TGGCCCCCTTTTATACCCCC 61.298 60.000 0.00 0.00 0.00 5.40
2914 3338 0.105862 GTGGCCCCCTTTTATACCCC 60.106 60.000 0.00 0.00 0.00 4.95
2915 3339 0.931468 AGTGGCCCCCTTTTATACCC 59.069 55.000 0.00 0.00 0.00 3.69
2916 3340 1.133575 GGAGTGGCCCCCTTTTATACC 60.134 57.143 0.00 0.00 0.00 2.73
2917 3341 2.359981 GGAGTGGCCCCCTTTTATAC 57.640 55.000 0.00 0.00 0.00 1.47
2933 3357 0.105039 GCTAGGGTTCATCACGGGAG 59.895 60.000 0.00 0.00 0.00 4.30
2934 3358 1.335132 GGCTAGGGTTCATCACGGGA 61.335 60.000 0.00 0.00 0.00 5.14
2935 3359 1.146263 GGCTAGGGTTCATCACGGG 59.854 63.158 0.00 0.00 0.00 5.28
2936 3360 0.105039 GAGGCTAGGGTTCATCACGG 59.895 60.000 0.00 0.00 0.00 4.94
2937 3361 0.105039 GGAGGCTAGGGTTCATCACG 59.895 60.000 0.00 0.00 0.00 4.35
2938 3362 1.414550 GAGGAGGCTAGGGTTCATCAC 59.585 57.143 0.00 0.00 0.00 3.06
2939 3363 1.292242 AGAGGAGGCTAGGGTTCATCA 59.708 52.381 0.00 0.00 0.00 3.07
2940 3364 1.967779 GAGAGGAGGCTAGGGTTCATC 59.032 57.143 0.00 0.00 0.00 2.92
2941 3365 1.413808 GGAGAGGAGGCTAGGGTTCAT 60.414 57.143 0.00 0.00 0.00 2.57
2942 3366 0.032017 GGAGAGGAGGCTAGGGTTCA 60.032 60.000 0.00 0.00 0.00 3.18
2943 3367 0.761323 GGGAGAGGAGGCTAGGGTTC 60.761 65.000 0.00 0.00 0.00 3.62
2944 3368 1.315216 GGGAGAGGAGGCTAGGGTT 59.685 63.158 0.00 0.00 0.00 4.11
2945 3369 2.717283 GGGGAGAGGAGGCTAGGGT 61.717 68.421 0.00 0.00 0.00 4.34
2946 3370 2.202899 GGGGAGAGGAGGCTAGGG 59.797 72.222 0.00 0.00 0.00 3.53
2947 3371 2.203567 CGGGGAGAGGAGGCTAGG 60.204 72.222 0.00 0.00 0.00 3.02
2948 3372 2.915137 GCGGGGAGAGGAGGCTAG 60.915 72.222 0.00 0.00 0.00 3.42
2949 3373 3.430497 AGCGGGGAGAGGAGGCTA 61.430 66.667 0.00 0.00 31.03 3.93
2950 3374 4.851214 GAGCGGGGAGAGGAGGCT 62.851 72.222 0.00 0.00 36.51 4.58
2952 3376 4.824515 ACGAGCGGGGAGAGGAGG 62.825 72.222 0.00 0.00 0.00 4.30
2953 3377 3.213402 GACGAGCGGGGAGAGGAG 61.213 72.222 0.00 0.00 0.00 3.69
2954 3378 4.816984 GGACGAGCGGGGAGAGGA 62.817 72.222 0.00 0.00 0.00 3.71
2955 3379 4.824515 AGGACGAGCGGGGAGAGG 62.825 72.222 0.00 0.00 0.00 3.69
2956 3380 3.213402 GAGGACGAGCGGGGAGAG 61.213 72.222 0.00 0.00 0.00 3.20
2957 3381 4.816984 GGAGGACGAGCGGGGAGA 62.817 72.222 0.00 0.00 0.00 3.71
2999 3423 3.767044 GAGAGGGAGGGGAGAGGGC 62.767 73.684 0.00 0.00 0.00 5.19
3000 3424 2.612251 GAGAGGGAGGGGAGAGGG 59.388 72.222 0.00 0.00 0.00 4.30
3001 3425 2.612251 GGAGAGGGAGGGGAGAGG 59.388 72.222 0.00 0.00 0.00 3.69
3002 3426 2.328589 TGGGAGAGGGAGGGGAGAG 61.329 68.421 0.00 0.00 0.00 3.20
3003 3427 2.204624 TGGGAGAGGGAGGGGAGA 60.205 66.667 0.00 0.00 0.00 3.71
3004 3428 2.041405 GTGGGAGAGGGAGGGGAG 60.041 72.222 0.00 0.00 0.00 4.30
3005 3429 3.695825 GGTGGGAGAGGGAGGGGA 61.696 72.222 0.00 0.00 0.00 4.81
3006 3430 4.825679 GGGTGGGAGAGGGAGGGG 62.826 77.778 0.00 0.00 0.00 4.79
3007 3431 3.700350 AGGGTGGGAGAGGGAGGG 61.700 72.222 0.00 0.00 0.00 4.30
3008 3432 2.041405 GAGGGTGGGAGAGGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
3009 3433 1.382420 CTGAGGGTGGGAGAGGGAG 60.382 68.421 0.00 0.00 0.00 4.30
3010 3434 1.862138 TCTGAGGGTGGGAGAGGGA 60.862 63.158 0.00 0.00 0.00 4.20
3011 3435 1.687493 GTCTGAGGGTGGGAGAGGG 60.687 68.421 0.00 0.00 0.00 4.30
3012 3436 1.687493 GGTCTGAGGGTGGGAGAGG 60.687 68.421 0.00 0.00 0.00 3.69
3013 3437 0.252467 AAGGTCTGAGGGTGGGAGAG 60.252 60.000 0.00 0.00 0.00 3.20
3014 3438 0.545309 CAAGGTCTGAGGGTGGGAGA 60.545 60.000 0.00 0.00 0.00 3.71
3015 3439 1.986413 CAAGGTCTGAGGGTGGGAG 59.014 63.158 0.00 0.00 0.00 4.30
3016 3440 2.224159 GCAAGGTCTGAGGGTGGGA 61.224 63.158 0.00 0.00 0.00 4.37
3017 3441 2.352805 GCAAGGTCTGAGGGTGGG 59.647 66.667 0.00 0.00 0.00 4.61
3018 3442 2.352805 GGCAAGGTCTGAGGGTGG 59.647 66.667 0.00 0.00 0.00 4.61
3019 3443 2.046892 CGGCAAGGTCTGAGGGTG 60.047 66.667 0.00 0.00 0.00 4.61
3020 3444 4.021925 GCGGCAAGGTCTGAGGGT 62.022 66.667 0.00 0.00 0.00 4.34
3021 3445 4.785453 GGCGGCAAGGTCTGAGGG 62.785 72.222 3.07 0.00 0.00 4.30
3022 3446 4.785453 GGGCGGCAAGGTCTGAGG 62.785 72.222 12.47 0.00 0.00 3.86
3023 3447 4.785453 GGGGCGGCAAGGTCTGAG 62.785 72.222 12.47 0.00 0.00 3.35
3058 3482 4.436998 GTGGTCTGAGGGGCGTCG 62.437 72.222 0.00 0.00 0.00 5.12
3059 3483 4.436998 CGTGGTCTGAGGGGCGTC 62.437 72.222 0.00 0.00 0.00 5.19
3077 3501 3.827898 GAGAGAGGTCCACCGCGG 61.828 72.222 26.86 26.86 40.98 6.46
3078 3502 3.827898 GGAGAGAGGTCCACCGCG 61.828 72.222 0.00 0.00 40.98 6.46
3079 3503 2.363147 AGGAGAGAGGTCCACCGC 60.363 66.667 0.00 0.00 39.34 5.68
3080 3504 1.755008 GGAGGAGAGAGGTCCACCG 60.755 68.421 0.00 0.00 37.57 4.94
3081 3505 1.382009 GGGAGGAGAGAGGTCCACC 60.382 68.421 0.00 0.00 44.50 4.61
3082 3506 1.382009 GGGGAGGAGAGAGGTCCAC 60.382 68.421 0.00 0.00 39.34 4.02
3083 3507 2.997584 CGGGGAGGAGAGAGGTCCA 61.998 68.421 0.00 0.00 39.34 4.02
3084 3508 2.123640 CGGGGAGGAGAGAGGTCC 60.124 72.222 0.00 0.00 36.79 4.46
3085 3509 2.835895 GCGGGGAGGAGAGAGGTC 60.836 72.222 0.00 0.00 0.00 3.85
3086 3510 4.467107 GGCGGGGAGGAGAGAGGT 62.467 72.222 0.00 0.00 0.00 3.85
3126 3550 2.593468 ATTGAGGTCATCGGCCACGG 62.593 60.000 2.24 0.00 41.39 4.94
3127 3551 0.744414 AATTGAGGTCATCGGCCACG 60.744 55.000 2.24 0.00 42.74 4.94
3128 3552 2.325583 TAATTGAGGTCATCGGCCAC 57.674 50.000 2.24 0.00 0.00 5.01
3129 3553 3.576078 AATAATTGAGGTCATCGGCCA 57.424 42.857 2.24 0.00 0.00 5.36
3130 3554 6.183360 GCTAATAATAATTGAGGTCATCGGCC 60.183 42.308 0.00 0.00 0.00 6.13
3131 3555 6.371548 TGCTAATAATAATTGAGGTCATCGGC 59.628 38.462 0.00 0.00 0.00 5.54
3132 3556 7.905604 TGCTAATAATAATTGAGGTCATCGG 57.094 36.000 0.00 0.00 0.00 4.18
3153 3577 9.700831 AATTAGTGAGTCCCTATTATTTTTGCT 57.299 29.630 0.00 0.00 0.00 3.91
3160 3584 9.824216 TGCTAGTAATTAGTGAGTCCCTATTAT 57.176 33.333 2.90 0.00 0.00 1.28
3161 3585 9.650714 TTGCTAGTAATTAGTGAGTCCCTATTA 57.349 33.333 2.90 0.00 0.00 0.98
3162 3586 8.548880 TTGCTAGTAATTAGTGAGTCCCTATT 57.451 34.615 2.90 0.00 0.00 1.73
3163 3587 8.548880 TTTGCTAGTAATTAGTGAGTCCCTAT 57.451 34.615 2.90 0.00 0.00 2.57
3164 3588 7.966339 TTTGCTAGTAATTAGTGAGTCCCTA 57.034 36.000 2.90 0.00 0.00 3.53
3165 3589 6.869206 TTTGCTAGTAATTAGTGAGTCCCT 57.131 37.500 2.90 0.00 0.00 4.20
3166 3590 7.916914 TTTTTGCTAGTAATTAGTGAGTCCC 57.083 36.000 2.90 0.00 0.00 4.46
3167 3591 9.162764 TGATTTTTGCTAGTAATTAGTGAGTCC 57.837 33.333 2.90 0.00 0.00 3.85
3169 3593 9.167311 CCTGATTTTTGCTAGTAATTAGTGAGT 57.833 33.333 2.90 0.00 0.00 3.41
3170 3594 9.383519 TCCTGATTTTTGCTAGTAATTAGTGAG 57.616 33.333 2.90 0.00 0.00 3.51
3171 3595 9.905713 ATCCTGATTTTTGCTAGTAATTAGTGA 57.094 29.630 2.90 0.00 0.00 3.41
3173 3597 9.905713 TGATCCTGATTTTTGCTAGTAATTAGT 57.094 29.630 0.00 0.00 0.00 2.24
3176 3600 9.247861 ACTTGATCCTGATTTTTGCTAGTAATT 57.752 29.630 0.00 0.00 0.00 1.40
3177 3601 8.680903 CACTTGATCCTGATTTTTGCTAGTAAT 58.319 33.333 0.00 0.00 0.00 1.89
3178 3602 7.362056 GCACTTGATCCTGATTTTTGCTAGTAA 60.362 37.037 0.00 0.00 0.00 2.24
3179 3603 6.094048 GCACTTGATCCTGATTTTTGCTAGTA 59.906 38.462 0.00 0.00 0.00 1.82
3180 3604 5.105997 GCACTTGATCCTGATTTTTGCTAGT 60.106 40.000 0.00 0.00 0.00 2.57
3181 3605 5.106038 TGCACTTGATCCTGATTTTTGCTAG 60.106 40.000 0.00 0.00 0.00 3.42
3182 3606 4.766373 TGCACTTGATCCTGATTTTTGCTA 59.234 37.500 0.00 0.00 0.00 3.49
3183 3607 3.575256 TGCACTTGATCCTGATTTTTGCT 59.425 39.130 0.00 0.00 0.00 3.91
3184 3608 3.916761 TGCACTTGATCCTGATTTTTGC 58.083 40.909 0.00 0.00 0.00 3.68
3185 3609 4.491676 CCTGCACTTGATCCTGATTTTTG 58.508 43.478 0.00 0.00 0.00 2.44
3186 3610 3.056322 GCCTGCACTTGATCCTGATTTTT 60.056 43.478 0.00 0.00 0.00 1.94
3187 3611 2.494870 GCCTGCACTTGATCCTGATTTT 59.505 45.455 0.00 0.00 0.00 1.82
3188 3612 2.097825 GCCTGCACTTGATCCTGATTT 58.902 47.619 0.00 0.00 0.00 2.17
3189 3613 1.284198 AGCCTGCACTTGATCCTGATT 59.716 47.619 0.00 0.00 0.00 2.57
3190 3614 0.917533 AGCCTGCACTTGATCCTGAT 59.082 50.000 0.00 0.00 0.00 2.90
3191 3615 0.694771 AAGCCTGCACTTGATCCTGA 59.305 50.000 0.00 0.00 0.00 3.86
3192 3616 2.408271 TAAGCCTGCACTTGATCCTG 57.592 50.000 0.01 0.00 0.00 3.86
3193 3617 3.659183 ATTAAGCCTGCACTTGATCCT 57.341 42.857 0.01 0.00 0.00 3.24
3194 3618 4.725790 AAATTAAGCCTGCACTTGATCC 57.274 40.909 0.01 0.00 0.00 3.36
3195 3619 5.803967 CAGAAAATTAAGCCTGCACTTGATC 59.196 40.000 0.01 0.00 0.00 2.92
3196 3620 5.244626 ACAGAAAATTAAGCCTGCACTTGAT 59.755 36.000 0.01 0.00 0.00 2.57
3197 3621 4.584325 ACAGAAAATTAAGCCTGCACTTGA 59.416 37.500 0.01 0.00 0.00 3.02
3198 3622 4.874970 ACAGAAAATTAAGCCTGCACTTG 58.125 39.130 0.01 0.00 0.00 3.16
3199 3623 5.535753 AACAGAAAATTAAGCCTGCACTT 57.464 34.783 0.00 0.00 0.00 3.16
3200 3624 5.534654 TGTAACAGAAAATTAAGCCTGCACT 59.465 36.000 0.00 0.00 0.00 4.40
3201 3625 5.768317 TGTAACAGAAAATTAAGCCTGCAC 58.232 37.500 0.00 0.00 0.00 4.57
3202 3626 6.015519 ACATGTAACAGAAAATTAAGCCTGCA 60.016 34.615 0.00 0.00 0.00 4.41
3203 3627 6.389906 ACATGTAACAGAAAATTAAGCCTGC 58.610 36.000 0.00 0.00 0.00 4.85
3204 3628 9.906660 TTAACATGTAACAGAAAATTAAGCCTG 57.093 29.630 0.00 0.00 0.00 4.85
3206 3630 9.353999 CCTTAACATGTAACAGAAAATTAAGCC 57.646 33.333 0.00 0.00 30.50 4.35
3212 3636 8.960591 CCTCATCCTTAACATGTAACAGAAAAT 58.039 33.333 0.00 0.00 0.00 1.82
3213 3637 7.094377 GCCTCATCCTTAACATGTAACAGAAAA 60.094 37.037 0.00 0.00 0.00 2.29
3214 3638 6.374333 GCCTCATCCTTAACATGTAACAGAAA 59.626 38.462 0.00 0.00 0.00 2.52
3215 3639 5.880332 GCCTCATCCTTAACATGTAACAGAA 59.120 40.000 0.00 0.00 0.00 3.02
3216 3640 5.428253 GCCTCATCCTTAACATGTAACAGA 58.572 41.667 0.00 0.00 0.00 3.41
3217 3641 4.576463 GGCCTCATCCTTAACATGTAACAG 59.424 45.833 0.00 0.00 0.00 3.16
3218 3642 4.227300 AGGCCTCATCCTTAACATGTAACA 59.773 41.667 0.00 0.00 30.82 2.41
3219 3643 4.781934 AGGCCTCATCCTTAACATGTAAC 58.218 43.478 0.00 0.00 30.82 2.50
3220 3644 4.473196 TGAGGCCTCATCCTTAACATGTAA 59.527 41.667 32.00 2.41 36.38 2.41
3221 3645 4.037222 TGAGGCCTCATCCTTAACATGTA 58.963 43.478 32.00 3.15 36.38 2.29
3222 3646 2.846206 TGAGGCCTCATCCTTAACATGT 59.154 45.455 32.00 0.00 36.38 3.21
3223 3647 3.565764 TGAGGCCTCATCCTTAACATG 57.434 47.619 32.00 0.00 36.38 3.21
3224 3648 4.803329 ATTGAGGCCTCATCCTTAACAT 57.197 40.909 35.42 20.17 39.64 2.71
3225 3649 4.591321 AATTGAGGCCTCATCCTTAACA 57.409 40.909 35.42 18.74 39.64 2.41
3226 3650 8.870075 ATAATAATTGAGGCCTCATCCTTAAC 57.130 34.615 35.42 5.75 39.64 2.01
3227 3651 9.520515 GAATAATAATTGAGGCCTCATCCTTAA 57.479 33.333 35.42 20.29 39.64 1.85
3228 3652 8.894592 AGAATAATAATTGAGGCCTCATCCTTA 58.105 33.333 35.42 28.45 39.64 2.69
3229 3653 7.763613 AGAATAATAATTGAGGCCTCATCCTT 58.236 34.615 35.42 27.42 39.64 3.36
3230 3654 7.340531 AGAATAATAATTGAGGCCTCATCCT 57.659 36.000 35.42 23.40 39.64 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.