>input_sequence_56255
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---------------------------------------------------------ATGGCTTCCACGGTGACGCTGCT
GAGGAAGACGGCCGCCATACGGATGAGCGACGTCGCCGCCGTGGCGTCGTCACCAGCGG---CGACGACGATGAAGTCGC
TTTTGCTGGAGGGAAGCAAAGGCGGCGGCGG------CGTGGCGAAGCGGTGCTGCGGGCGCAAGTGCGAGCTCGTCGGC
TACGACGCGCTCCCGGCATTCCTGCAGCACAACGAGTTCATCCTCCACTACTACCGCAGCGAGTGGCCCCTCAAGGAGGC
GCTCCTCAGTGCCTTCGCCCTCCACAACGAGACCATCAACGTCTGGACGTAAGCCTCTCTGC---CCGAGCACGTACTAC
GTCCGTGA---------CACGTCGCGCATGCGCTTTAGAAGCTGACGCGTGTTTTCTCGCAGGCATTTGATCGGCTTCTT
CGTGTTCCTCGCGCTCACCGTGTGCGCCGCCACGATGGTCCCCATGGAAACCAGCGTGTCCCACTCGGTGAGATCCACGG
GCCTGGCCAACTGCACCGGCAACGGCGACCACAGGGTGCTCATGACCTCCTACGGCACCAGCGGAGCGGCCGTGGCAATG
CAGGCGCTGCTGCGCCGCAACGTGTCCGTCTCCGGCGAGACGGACCTCGCGGCAGCGGCGGCGTTGTCGCTGTTGTCAGG
AGAGCACGGTCCGGTCGAGCGGTGGCCGTTCTACACGTACCTGTGCGGCGCCATGTTCTGCCTGCTGATGAGCAGCGGGT
GCCACCTGCTGGCGTGCCACTCGGAGCACGCCAGCTACGTGCTGCTCCGCCTCGACTACGCCGGGATCACCGGCCTCATC
GTCACCTCCTTCTACCCGCTCGTCTACTACACCTTCCTCTGCGACCCCTTCTCCCGGACGCTCTACCTCGGCTCCATCAC
CGTGTTCGGCGCCGCCGCGGTGGCCGTGTCGCTGCTGCCGGTCTTCGAGGCGCCCGAGCTGAGGTGGGCGCGCGCGGCGC
TGTTCGTGTGCATGGGCGCGTCCGGCCTCGTGCCCATCGTGCACAAGATGCTCGTGTTCGGCGCAAGGCCCGAGGCGGTG
GTCACCACGGGATACGAGGTGGCCATGGGGGTGTTCTACCTGGCCGGCGTGCTGGTGTACGCGACGAGGGTGCCGGAGAG
GTGGATGCCGGGCAGGTTTGACCTCGTCGGGCACAGCCACCAGCTGTTCCACGCGCTTGTCATCGCCGGCGCTTACGCGC
ACTACAATGCCGGCCTGGTTTACTTGAGCTGGAGGGACATGGACAAGTGCTGA---------------------------
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>chr4D_1_TraesCS4D01G260600
CGCCGAGGTCGGCCACACCGCCACCATGAA-GAGGTGCACGGGCCCGACGAGCCCCGTCTCCCCGCCGAGGCCGGCCACA
CCGCCACCACCTCGAGCCGGCGCCACCATCGACCGGCCTGTCGAGCTTCTCCACCGCCTACCACGCAGCTGCCCACGACC
TGGCCGCCGACGCGTCGAGCTGCTCCACCGCGGGCCACGTTGCTTCCCGCGACCTGCCACCGCCGAGCCGCCGGCGCCTT
AAGCTGCTCCACCGC------------------------------------GACCTGGAAGCCACAAAGCCGCCGGCGCC
ATTCCTCATGGCG-ATGCG----GCTTCTCTCAGGGACCCGATTGCTTTTTTTT-A-ACTTATAGGGACCCGATTGCTTT
TTC--AAAAAACTTACAGGGACTATTCTGTAAAACAATTAGGCCATATATTTTGAGATATTTTTATTGGAGTGTAAGAGA
CACTGACATGTGAGCCCCACATGTCAGTTAACGGTCAAACAAACGG------------TTTGTTTAGGTGCGGGCCCAGC
CTGTCATAATCGCGATAAAGTGTAAATCAGTCGGCGATTTGGGGTTTTTGAAACGCGA-------ATTGTGGTAGTTTTA
TGCTATTTACTCTAAATTCACACTGTACTGTGACTTTACGCCGTCTGCCATTGATTGGTGTTGCAGGACACCGCAC----
----TCAAAGTAGCCACCGGGAACAACGACAGGCTATACAT-AGCATAAGAACACTCGTGGTCTGCC----TATTAGTAT
TAACTTGTGCCGGCGCTAATTGCTGGACCTGCAACACGATCCATCGTTTTTTAAGCGTCCTGGCGTGCGCAGTTGCTCTA
ATCGGACCGTTTCAGGGCACCCATTTCCCACCTAAACTCGGTCACAACAAGTCAACACTAGAGCTTTA------TATATA
TACCCGGAGAAGCCCAGTCACACCGAAC-CACA------------CCCCTCTACTTCTCCCTCGAGTCGAGTCCTCGGTC
GACCACACGAGATCGAGGTTAATTTTCCATAGCCGGCTACCGAGCAGGACTCGGGGAATGGCTTCCACGGTGACGCTGCT
GAGGAAGACGGCCGCCATACGGATGAGCGACGTCGCCGCCGTGGCGTCGTCACCAGCGG---CGACGACGATGAAGTCGC
TTTTGCTGGAGGGAAGCAAAGGCGGCGGCGG------CGTGGCGAAGCGGTGCTGCGGGCGCAAGTGCGAGCTCGTCGGC
TACGACGCGCTCCCGGCATTCCTGCAGCACAACGAGTTCATCCTCCACTACTACCGCAGCGAGTGGCCCCTCAAGGAGGC
GCTCCTCAGTGCCTTCGCCCTCCACAACGAGACCATCAACGTCTGGACGTAAGCCTCTCTGC---CCGAGCACGTACTAC
GTCCGTGA---------CACGTCGCGCATGCGCTTTAGAAGCTGACGCGTGTTTTCTCGCAGGCATTTGATCGGCTTCTT
CGTGTTCCTCGCGCTCACCGTGTGCGCCGCCACGATGGTCCCCATGGAAACCAGCGTGTCCCACTCGGTGAGATCCACGG
GCCTGGCCAACTGCACCGGCAACGGCGACCACAGGGTGCTCATGACCTCCTACGGCACCAGCGGAGCGGCCGTGGCAATG
CAGGCGCTGCTGCGCCGCAACGTGTCCGTCTCCGGCGAGACGGACCTCGCGGCAGCGGCGGCGTTGTCGCTGTTGTCAGG
AGAGCACGGTCCGGTCGAGCGGTGGCCGTTCTACACGTACCTGTGCGGCGCCATGTTCTGCCTGCTGATGAGCAGCGGGT
GCCACCTGCTGGCGTGCCACTCGGAGCACGCCAGCTACGTGCTGCTCCGCCTCGACTACGCCGGGATCACCGGCCTCATC
GTCACCTCCTTCTACCCGCTCGTCTACTACACCTTCCTCTGCGACCCCTTCTCCCGGACGCTCTACCTCGGCTCCATCAC
CGTGTTCGGCGCCGCCGCGGTGGCCGTGTCGCTGCTGCCGGTCTTCGAGGCGCCCGAGCTGAGGTGGGCGCGCGCGGCGC
TGTTCGTGTGCATGGGCGCGTCCGGCCTCGTGCCCATCGTGCACAAGATGCTCGTGTTCGGCGCAAGGCCCGAGGCGGTG
GTCACCACGGGATACGAGGTGGCCATGGGGGTGTTCTACCTGGCCGGCGTGCTGGTGTACGCGACGAGGGTGCCGGAGAG
GTGGATGCCGGGCAGGTTTGACCTCGTCGGGCACAGCCACCAGCTGTTCCACGCGCTTGTCATCGCCGGCGCTTACGCGC
ACTACAATGCCGGCCTGGTTTACTTGAGCTGGAGGGACATGGACAAGTGCTGACTACTGTCGTGCACGGTCTGCCAAGAC
AAAGAATTTTGACGAAAGAAGTTCTAGTAC--TACAAGAATTGTGGTGTTATTGAGCTA--CACAAACTTATGCCAGAAC
CGTACAAAAGAGCATCAAATTTCACACTTTTTGTGTGTAGATAGACTTGACATATAACTAGTTCAATGCTCATACTTTGC
CGACAATATTTTTAGACATAAGTATATCGATTCATACCAAATTACTATGAATAAATGGTATACCTCTGGCAATAATTGGA
GTAACTTAGTAAGCATCTCGAGCCGAAACTTCAAATTTAGCCCTTCTCTGTTGTGTTCTTGTTGTT--------------
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-----------------------------------------------CATCTCCTTATGTTCACCATTAACACTTTTGCC
CTTCTCTGTTGACTTCTTTACACTGTACACTTGTTTATTCTCTTAATCCTAATGCAGAAAATTTGAACATTGCATCCAGA
AACAAGAACTCAGGTTCCACCGGGCGCTCCTCAGCGATTAGAGCTTCTCGGCCGTCCGATCGTTTTCCTGATGCGATTCC
AGCCGTTGGATCTCGGGCTCGGCTCACGTGAGGCGTCGGATATTTACCAGATCGCTGTGAGCCGTCGGATAAAATTCCAA
TGGCAACAGAATGTAAATACGGTGCCCCCACCAGGGCATTTCGGTCATTTCGCGTAGGGGGTATAAAAGGGGGCCACTCC
CGTGATGAACCCTAGCCTCCTCTCCCCGCTCGTCCTCCCGCGTCCCAGCCCCTGCTCGCCCCGCCCTCTCCCCTCCCTCT
CCCACCCTCAGACCTTGCCGCCCCGCTCACATCGCTGCCGCCGACGCCCCTCAGACCACGCCGCGGTGGACCTCTCTCCT
CCCCGCCCCGCCCGTCCCGCTCGCCGTGGCCGTGGCCGATGACCTCAATTATTATTAGCAAAAATAATAGGGACTCACTA
ATTACTAGCAAAAATCAGGATCAAGTGCAGGCTTAATTTTCTGTTACATGTTAAGGATGAGGCCTCAATTATTATTCT
>chr6D_1
CGCCGAGGTCGGCCACACCGCCACCATGAA-AAGGTGCACGGGCCCGACGAGCCCCGTCTTCCCGCCGAGGCCGGCCACA
CCGCCACCACCTCGAGCCGGCGCCGCCATCGACCGGCCTGTCGAGCTTCTCCACCGCCTACCACGCAGCTGCCCACGACC
TGGCCGCTGACGCGTCGAGCTGCTCCACCGCGGGCCACGTTGCTTCCCGCGACCTGCCACCGCCGAGCCGCCGGCGCCTT
GAGCTGCTCCACCGC------------------------------------GACCTGGAAGCCGCAGAGCCGCCGGCGCC
ATTCCTCATGGCG-ATGCG----GCTTCTCTCAGGGACCCGATTGCTTTTTT-T-A-ACTTATAGGGACCA-ATTGCTTT
TTC--AAAAAACTTACAGGGACTATTCTGTAAAACAATT--GCCATATATTTTGAGATATTTTTATTGGAGTGTAAGAGA
CACTGACATGTGAGCCCCACATGTCAGTTAACGGTCAAACAAACGG------------TTTGTTTAGGTGCGGGCCCGGC
CTGTCATAATCGCGATAAAGTGCAAAGCAGTCGGCGATTTGGGGTTTTTGAAACAGCCGGCGCCGATTCTGGTAGTTATC
AGTC----------------------------------------------------------------------------
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------------------------------------------------------------------------------AC
AAACAAATTTGTGGTAGTTTTTCGGAACCCTA-ACGCGAATTGTGGTAGTTTTATGCTATTTACTCTA------------
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>chr2D_1
CGCCGACGTCGACTACACCGCCGCCGTGAAGGAGG-GCACGGGCCTGACGAGCCCCGTCTCCCCGCCGAGGCCGGCCACA
CCGCCACCACCTCGAGTTGGCACCACCGTCGATCGGCCCGTCGAGCTTCTCCACCGCCGACCACGCTGCTGCCCACGACC
TGGCCGTCGACGCGTCGAGCTGCTCCACCGCGGGCCACGCTGCTTCTCGCGACCTGCCACTGCCGAGTCGCCGGCGCCTC
GAGCTGCTCCACCGCCAGCTAC-----------------GCTGCTGCCGGCGACCTGGACGCTGCAGAGCCGCCGGCGCC
ATTCCTCATGGCGAATGCG----GCTTCTCCCAGGGGCCCGATTGTTTTTTTC-AA-ACTTATAGGGACCCGATTGC-TT
TTT--AAAAAACTTACAGGGACTATCCTGTAAAACAATTAGGCCACATATTTTGAGATATTTTTATTAGAGTGTAAGAGA
CACTGACATGTGGGCCCCACATGTCAGTTAACGGTCAAACAAACGGTCAAACAGACGGTTTGTTTAGGTGTGGGCCCGAC
CTGTCATAATCGCGATCAAGTGCAAACCACTCGGTGATTTGGGTTTTTTGTAAC--------------------------
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>chr5D_1
CGCCGAGGCCGGCCACACTGCCGCCATGAAGGAGGTGCAAGGGCCCGACGAGCCCCGTCTCCCCGCTGAGGCCGGCCACA
CCGCCACCACCTCGAGCCGGCGCCGCCATTGACCGGCCCGTCGAGCTTCTCCATCGCCGACCACGCTGCTGCCCACGACC
CGGCCGCCGACGCATCGAGCTGCTCCACCGCGGGCCAC--TGCTTCCCGCGACCTGCCACCGCCGAGCCGCCGGCGCCTC
GAGCTGCTCCACCGCCAGCTAC-----------------G-----------------GACGCCGCAGAGTCGCCGCCGCC
ATTCCTCATGGCGAATGCGGCTAGCTTCTCCCAGAGACCCGATTG---------------TATAGGGACCTGATTGC-TT
TTTAAAAAAAACTTACATGGACTATTTTGTAAAACTTACAT----------------------------AGTGTAAGAGA
CACTAACATGTGGGCCCCACATGTCAGTTAACGGTCAAACAAACGGTCAAACAGGTGGTTTGTTTAGGTGCGGGCCCAGC
CTATCATAATCGCGATCAAATGCAAACCACTCGGCGATTTGGGTTTTTTGAAAC--------------------------
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------------------------------------------------------------------------------
>chr6B_31
-------------------------------GAGGTGCACATGCCCGACGAGCCCCGTCTCCCCGCCGAGGTCGGCCACA
CCGCCACCACCTCGAGCCGGCGCCGCCATCGACCGGCCCGGCGAGCTTCTCCA-CGCCGACCACGCAGCTGCCCACGACC
TGGCCGCCGACGTGTCGAGCTGCTCCACCGCGGGCCACATTGCTTCCCGCGACCTGCCACCGCCGAGCCGCCGGCGCCTC
GAGCTGCTCCACCGCCAGCTAC-----------------GCTGTTGGGCGCGACCTGGACTCCGCCAAGCTGCCGGCGCC
ATTCCTCCTGGGGAATGCAGCTT-CTTCTCCCAGGGACCCGATTGCTTTTTCTT-ACACTTATAGGGACCCGATTGC-TT
TTTTC-AAAAACTTACAGGGACTATTCTGTAAAACAATTAGGCCATATATTTTGAGATATTTTTATTGGAGTGTAAGAGA
CACTAACATGTGGACCCCACATGTCAGCTAACGGTCAAACAAACGATCAAACAGAAGGTTTGTTTAGGTGCGGGCCCGGC
CTGTCATAATCACGATCAAGTGCAAAGCAGTCGGCAATTTGGGTTTTTTGAAA---------------------------
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------------------------------------------------------------------------------
>chr1B_76
----------------------------------------------------------------------------CACA
CCGCCACCACCTCGAGTCGGCGCTGCCATCGACCGGCCCGTCGAGCTTCTTCACTGCCGACCACGCTGCTGCCCATGACC
TGGCCGCCGACGAGTCGAGCTGCTCCACCGTGGTCCACACAGCTTCCCGTGACCTACCACCGCCGAGCTGCCGATGCCTC
GAGCTGCTCCACCCCCAGCTATGCTGTTGCGCGCGATCTG-----------------GACGCCGCAAAGCCGCCGGTGCC
ATTCCTCATGGCGAATGCG----GCTTCTCCCAGGGACCATGTTGCTTTTTAAAAA-ACTTATAGGGACCCAATTGC-TT
TTT--AAAAAACTTACAGGGACTATTATGTAAAACAATTAGGCCATATATTTTGAGATGTTTTTATTAGAGTGTAAGAGA
CACTGACATGTGGGCCCTGCATGTCAGTTAACGGTCAAACAAACGGTCAAACAGACGGTTTGTTTAGGTGCGGGCTCAGT
CTGTCATAATCGCGATCAAGTGCAAAGCACTAGGCGACTTTGGTTTTTTGAAAC--------------------------
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>chr4A_589
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-------------AAATTCACACTGTACTGTGACTTTACGTCGTCTGCCATTGATTGGTGTTGCAGGATACCGCGCTCAA
AGAGTCAAAGTAGCCACCGGGAACAACGACAGGCTACATAGCAGCACACGAGCGCTCGTGGTCTGCC----TATTACTAT
TAACTTGTGCCGGCGCTAATTGCTGGACCTGCGCCACGATCCATCGTTTTTTAAGCGTCCTGGTGTGCGCAGTTGCTCTA
ATCGGACCGTTTCAGGGCACCCATTTCCCACCTAAACTCGGTCACAATAAGTCAACACTAGAGCTTAT---------ATA
TACCCAGAGAAGCCCAAGCACACTGGAACCACACTCCAATCGCCTCCTCTCTACTTCTCCCTAGC-------------TC
GACCACACGAGATCGAGGTTAATTTTCCAAAGCCGGCTACCGAGCAGGACTGGGTGAATGGCTTCCACGGTGACGCTGCT
GAGGAAGACGGCCGCCATACGGATGAGCGACGTCGCCGCCGTGGCGTCGTCACCAGCGGCGACGACGACGATGAAGTCGC
TTTTGCTGGAGGGAAGCAAAGGCGGCGGCGG------CGTGGCGAAGAGGTGCTGCGGGCGCAAGTGCGAGCTCGTCGGC
TACGACGCTCTCCCGGCCTTCCTGCAGCACAACGAGTTCATCCTCCACTACTACCGCAGCGAGTGGCCCCTCAAGGAGGC
GCTCCTCAGCGCCTTCGCGCTCCACAACGAGACCATCAACGTCTGGACGTAAGCCTCTCTGTCCGCCGAGCACGTA---C
TTCCGGGA---------CACGTCGCGCATGCGCTTTAGAAGCTGACGCGTGTTTTCTCGCAGGCATTTGATCGGCTTCTT
CGTGTTCCTCGCGCTCACCGTGTGCGCCGCCACGATGGTCCCCATGGAAACCAGTGTGACCCACTCGGCGACATCCGCGG
GCCTGGCGAACTGTACCGGCAACGGCGACCCCATGGTGCTGATGGCCTCCTACAGCACCAGTGGAGCGGCCGTGGCAATG
CAGACGCTGCTGCGCCGCAACGTGTCCGTCTCCGGCGAGACGGACCTCGCGGCAGCGGCGGCGTTGTCGCTGTTGTCGGG
AGAACACGGCCCGGTCGAGCGGTGGCCGTTCTACACGTACCTGTGCGGCGCCATGTTCTGCCTGCTGATGAGCAGCGGGT
GCCACCTGCTGGCGTGCCACTCGGAGCACGCCAGCTACGTGCTGCTCCGCCTCGACTACGCCGGCATCACCGGCCTCATC
GTCACCTCCTTCTACCCGCTCGTCTACTACACCTTCCTCTGCGACCCCTTCTCCCGGACGCTCTACCTCGGCTCCATCAC
CGTGTTCGGCGCCGCCGCGGTGGCCGTGTCGCTGCTGCCGGTCTTCGAGGCCCCCGAGCTCCGATGGGCGCGCGCCGCGC
TGTTCGTGTGCATGGGCGCGTCCGGCCTCGTGCCCATCGTGCACAAGATGCTCGTGTTCGGCGCACGGCCCGAGGCGGTG
GTCACCACGGGATACGAGGTGGCCATGGGGGTGTTGTACCTGGCCGGCGTGCTGGTGTACGCCACGAGGGTGCCGGAGAG
GTGGATGCCGGGCAGGTTTGACCTCGTCGGGCACAGCCACCAGCTGTTCCACGCGCTTGTCATCGCCGGCGCTTACGCGC
ACTACCATGCCGGCCTGGTTTACTTGAGCTGGAGGGACATGGACAAGTGCTGACCACTGTCGTGCACGGTCTGCCCGGAC
AAAGAATTTTGACGAAAGAAGTTCTAGTAC--TACAAGAATTGTGGTGTTATTGAGCTATACACAAACCTTTGCCAGAAC
C--ACAAAAGAACATCAAATTTCACACTTCTTGTGTATAAATAGACTTGACATATAACTAGTTCAATGCTCTTACTTTGC
CGACAATATTTTTAGACATAAATATATCGATTCATACCAAATTACTATGAATAAATGGCC-----------ATAGTTGGA
GTAT----------------AGCCGAAACTTAAAATGTAGCCCCACACGCTCTCAGACCTTGACTCCACAATTTGAGTCC
CCCCCACCCCCTCCCCCAACAAAAAAAAAAACTCTAAAATTTGAGGATTTAAATTGAAGTGGTTCCTTACCGAACTCGTA
TAACTTAACTCCCCAAGAAGATTTAACACAAATTCATTTATTTAGGTCAATGACTTAAAGCTTCACTACTTCATAAAATG
ATATTTTGGGCACATAGTTCATCGGTTCCTTAACATGAGAACTAATCCAAACAAAATTACAAGAACAATTACACACTTTA
ACATGAAGACAACTTATTGCTACCACAAGTGCAATCAACACCTTTTCCATCTCCTTATGTTCACCATTAACACTTTTGCC
CTTTGCTGTTGACTTCTTTGCCCTGGACACTTGTTTCTTCTCTTAATTCTAATGTAAAAAAATTGAACACTGCATCC---
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>chr4B_589
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-------------AAATTCACAATGTACTGTGACTTTACGCCGTCTGCCATTGATTGGTGTTGCAAGACACCGCGCG---
-----CAAAGTAGCCACCGGGAACAACGACAGGCTACATAGCAGCACACGAGCACTCGTGGTCTGCCCTATTAGTAGTAT
TAACTTCTGCCGGCACTAATTGCTGGACCTGCAACACGATCCGCCGTTTTTTAAGCACCCTGGCGTGCGCAGTTGCTCTA
ATTGGACCGTTTCAGGGCACCCATTTCCCACCTAAACCCGGTCACAATAAGTCAACAGTAGAGCTTATGAGGCTTATATA
TACCGGGAGAA-CCCAGTCACACCGAAATCACA------------CTCCTCTACTTCTCCCTCGAGTCCTCGGTCGAGTC
GACCACACGAGATCGTGCC----TTTCCATAGCCGGGTACTGAACAAGACTAGGAGAATGGCTTCCACGGTGACGCTGCT
GAGGAAGACGGCCACCATACGGATGAGCGACGTCGCCGCCGTGGCGTC---ACCAGCGG---------CGATGAAGTCGC
TTTTGCTGGAGGGAAGCAAAGGCGGCGGCGGCGGCGACGTGGCGAAGCGATGCTGCGGGCGCAAGTGCGAGCTCGTCGGC
TACGACGCGCTCCCGGCCTTCCTGCAGCACAACGAGTTCATCCTCCACTACTACCGCAGCGAGTGGCCCCTCAAGGAGGC
GCTCCTCAGCGCCTTCGCCCTCCACAACGAGACCATCAACGTTTGGACGTAAGCCTCTCT-----------ACGTC---C
GTCCGTGA---------CACGCCATGCATACGCTTT---AGCTGACGCGTGTTTTCTCGCAGGCATTTGATCGGCTTCTT
CGTGTTCCTCGCGCTCACCGTGTGCGCCGCCACGATGGTCCCCATGGAAACCAGA------------GCGACATCCGCGG
GCCTGGCGAACTGCACCGGCAACAGCAACCCTAGAGTGCTGATGACCTCCTACGGCAGCAACGGAGCGGCCGTGGCAATG
CAGGCGCTGCTGCGCCGCAACGTGTCCGTCTCCGGCGAGACGGACCTCGCGGCAGCGGCGGCGTTGTCGCTGTTGTCAGG
AGAACACGGCCCGGTCGAGCGGTGGCCGTTCTACACGTACCTGTGCGGCGCCATGTTCTGCCTGCTGATGAGCAGCGGGT
GCCACCTGCTGGCGTGCCACTCGGAGCACGCCAGCTACGTGCTGCTCCGCCTCGACTACGCCGGCATCACCGGCCTCATC
GTCACCTCCTTCTACCCGCTCGTCTACTACACCTTCCTCTGCGACCCCTTCTCCCGGACGCTCTACCTCGGCTCCATCAC
CGTCTTCGGCGCCGCCGCGGTGGCCGTGTCGCTGCTGCCGGTCTTCGAGGCACCCGAGCTGAGGTGGGCGCGCGCCGCGC
TGTTCGTGTGCATGGGCGCGTCCGGCCTCGTGCCCATCGTGCACAAGATGCTCGTGTTCGGCGCACGGCCCGAGGCGGTG
GTCACCACGGGATACGAGGTGGCCATGGGGGTGTTCTACCTGGCCGGCGTGCTGGTGTACGCCACGAGGGTGCCGGAGAG
GTGGATGCCGGGCAGGTTTGACCTCGTCGGGCACAGCCACCAGCTGTTCCACGCGCTTGTCATCGCCGGCGCTTACGCGC
ACTACAATGCCGGCCTGGTTTACTTGAGTTGGAGGGACATGGACAAGTGCTGACTACTGTCGTGCACGGTCTGCCAAGAC
AAAGAATTTTGACGAAAGAAGTTCTAGTGGAGTACAAGAATTGTGGTGTTATTGAGCTA--GACAAACCTATGCCAGAAC
C--ACAAAAGAACATCAAATTTCACACTTTTTGTGTGTAGATAGACTTGACATATAACTAGTTCAATGCTCTTACTTTGC
CGACAATAATTTTAGACATAAATATATCGATTCATAGCAAAT--------------------------------------
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>chr2D_1162
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-------------------------------------------------------------------CGAGCTCGTCGGC
TACGACGCGCTCCCGGCCTTCCTGAAGCACGACGAGTTCATGCTTGACCACTACCGCAGCGAGTGGCCTGTCAAGCAGGC
GATCCTCAGCGCCTTCACCCTCCACAACGAGACGATCAACGTGTGGACGTAGGTTCCGTGAGCCTTCCCTAATGTCACAC
TTGATCAAAATATATCTCACGTCACGTGTGCTCTTCAACGAAACCC-----------CGCAGGCATTTGATCGGCTTCTT
CATGTTCCTCGCGCTCACTA------------------------------------------------------------
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----------------------TGTCCGTCTC------------------------------------------GTCGGC
GGAGCACGGCCGGGTAGCGCGGTGGCCGTTCTACGCGTGCCTGTGTGGCGCCATGTTCTGCCTGCTGATGAGCAGCGGGT
GCCATCTGCTGGCGTGCCACTCGGAGCGTGCCACGTACGTGCTGCTCCGGCTCGACTACGCCGGCATCACCAGCCTCATC
GTCACCTCCTTCTACCCGGTCGTCTACTACACCTTCCTCTGTGACCCCTTCTCCCGTACGCTCTACCTTGGCTTCATCAC
CATCTGTGGCGCTGCCGCTGTGGCCGTCTCACTGCTGCCAGTCTTCCAGGCGCCTGAGCTACGGTGGACACGCGCTGCGC
TATTCGCGTGCATGGGCGCGTCCGGCATCGTGCCCATAGTGCACAAGATGCTCGTGTTCAGCGCACGACCCGAGGCGGTG
CTCACAACAGGTTACGAGGTGGTCATGGGGGTGTTCTATCTTGCCGGCGTGTTGGTTTACGCCACGAGGGTGCCAGAGAG
GTTTATGCCGGGAATGTTTGACCTCGTCGGGCATAGCCACCAGCTGTTCCACTTGCTAGTCATCGCCGGCGCTTACGCGC
ACTACCATGCCGGCCTCGTTTACTTGAGTTGGCGGGACAGGGACCAGTGCTGAGCTGACTG-------------------
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>chr2B_1637
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--------------------------------------------------------------------------GTCGGG
GGAGCACGGCCCGGTCACGCGGTGGCCGTTCTACACGTACCTGTGCGGCGCCATGTTCTGCCTGCTGATGAGCAGCGGTT
GCCATCTGCTGGCGTGCCACTCGGAGCATGCCACCTACGTGCTGCTCCGGCTCGACTACGCCGGCATCACCGGCCTTATC
GTCACCTCCTTCTACCCGGTCGTCTACTACACCTTCCTCTGTGACCCCTTCTCCCGTACACTCTACCTTGGCTCCATCAC
CATCTGCGGCGCGGCCGCTGTGGCTGTCTCGCTGCTGCCGGTCTTCCAGGCACCTGATCTGCGGTGGGCGCGCGCTGCGC
TATTCGCGTGCATGGGCGCGTCCGGCATCGTGCCCATCATGCACAAGATGCTCATGTTCCATGCACGACCCGAGGCGGTG
CTCACGACTGGTTACGAGGTGGTCATGGGGGCGTTCTACCTTGCCGGCGTGTTGGTTTACGCCACAAGGGTGCCGGAGAG
GTTTATGCCAGGAATGTTTGACCTCGTCGGGCATAGCCACCAGCTGTTCCACGTGCTAGTCATTGCCGGCGCTTACGCGC
ACTACCATGCTGGCCTGGTTTACTTGAGTTGGCGGGACAGGGACCAGTGCTGAGCTGACTG-------------------
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>chr2B_1637
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--------------------------------------------------------------------------GTCGGG
GGAGCACGGCCCGGTCACGCGGTGGCCGTTCTACACGTACCTGTGCGGCGCCATGTTCTGCCTGCTGATGAGCAGCGGTT
GCCATCTGCTGGCGTGCCACTCGGAGCATGCCACCTACGTGCTGCTCCGGCTCGACTACGCCGGCATCACCGGCCTTATC
GTCACCTCCTACTACCCGGTCGTCTACTACACCTTCCTCTGTGACCCCTTCTCCCGTACACTCTACCTTGGCTCCATCAC
CATCTGCGGCGCGGCCGCTGTGGCTGTCTCGCTGCTGCCGGTCTTCCAGGCACCTGATCTGCGGTGGGCGCGCGCTGCGC
TATTCGCGTGCATGGGCGCGTCCGGCATCGTGCCCATCGTGCACAAGATGCTCATGTTCCATGCACGACCCGAGGCGGTG
CTCACGACTGGTTACGAGGTGGTCATGGGGGCGTTCTACCTTGCCGGCGTGTTGGTTTACGCCACAAGGGTGCCGGAGAG
GTTTATGCCAGGAATGTTTGACCTCGTCGGGCATAGCCACCAGCTGTTCCACGTGCTAGTCATTGCCGGCGCTTACGCGC
ACTACCATGCTGGCCTGGTTTACTTGAGTTGGCGGGACAGGGACCAGTGCTGAGCTGACTG-------------------
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>chr2B_1637
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--------------------------------------------------------------------------GTCGGG
GGAGCACGGCCCGGTCACGCGGTGGCCGTTCTACACGTACCTGTGCGGCGCCATGTTCTGCCTGCTGATGAGCAGCGGTT
GCCATCTGCTGGCGTGCCACTCGGAGCATGCCACCTACGTGCTGCTCCGGCTCGACTACGCCGGCATCACCGGCCTTATC
GTCACCTCCTTCTACCCGGTCGTCTACTACACCTTCCTCTGTGACCCCTTCTCCCGTACACTCTACCTTGGCTCCATCAC
CATCTGCGGCGCGGCCGCTGTGGCTGTCTCGCTGCTGCCGGTCTTCCAGGCACCTGATCTGCGGTGGGCGCGCGCTGCGC
TATTCGCGTGCATGGGCGCGTCCGGCATCGTGCCAATCGTGCACAAGATGCTCATGTTCCATGCACGACCCGAGGCGGTG
CTCACGACTGGTTACGAGGTGGTCATGGGGGCGTTCTACCTTGCCGGCGTGTTGGTTTACGCCACAAGGGTGCCGGAGAG
GTTTATGCCAGGAATGTTTGACCTCGTCGGGCATAGCCACCAGCTGTTCCACGTGCTAGTCATTGCCAGCGCTTACGCGC
ACTACCATGCTGGCCTGGTTTACTTGAGTTGGCGGGACAGGGACCAGTGCTGAGCTGACTG-------------------
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>chr5D_1661
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------------------GCGGTGGCCGATGTTCGCGTACCTGTGCGGAGCCATGGTGTGCCTACTTACGAGCAGCGCAT
GCCACCTGGTGCTGTGCCACTCGGAGAGAATGGCGTACGTGACGCTCCGGCTGGACTACGCCGGCATCGCCGCCCTGATC
GTCACCTCCTTCTACCCGGTCGTCTACTACTCCTTCCTCTGCCACCCGGGGCTCCAGCGGCTCTACATGGGCTTCATCAC
CGCCTTCGGCGCCGCGGCGGTCACGGCGTCGCTGGTGCCGGTGTTCCAGGCGCCCGAGTTCCGCCCGCTCCGCGCCGGGC
TCTTCTCATGCATGGGCGTGTCGGGGCTCATCCCCGTCGCGCACAAGCTCGTGCTATACGGCGGCCGGCGGGAGGCCGCC
GTGACTGCGTGCTACGAGGCGCTCATGGGCGCGCTCTACGGGCTCGGCGCCGCCGTCTACGCGGCGCGCGTGCCGGAGCG
GTGGTTCCCCGGGAGGTTCGACCTCGTCGGGCACAGCCACCAGCTGTTCCATCTCTTCGTCATCGCCGGCGCGTACGCGC
ACTAC---------------------------------------------------------------------------
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>chr5A_1661
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------------------GCGGTGGCCGATGTTCGCGTACCTGTGCGGAGCCATGGTGTGCCTGCTTACGAGCAGCGCGT
GCCACCTGGTGCTGTGCCACTCGGAGAGAATGGCGTACGTGACGCTCCGGCTGGACTACGCCGGCATCGCCGCCCTCATC
GTCACCTCCTTCTACCCGGTCGTCTACTACTCCTTCCTCTGCCACCCGGGGCTCCAGCGGCTCTACATAGGCTTCATCAC
CGCCTTCGGCGCCGCGGCGGTCACGGTGTCGCTGGTGCCGGTGTTCCAGGCGCCCGAGTTCCGCCCGCTCCGCGCCGGGC
TCTTCTCGTGCATGGGCGTGTCGGGGCTCATCCCCGTCGCGCACAAGCTCGTGCTGTACGGCGGCCGGCGGGAGGCCGCC
GTGACGGCGTGCTACGAGGCGCTCATGGGCGCGCTCTACGGGCTCGGCGCCGCCGTCTACGCGGCGCGCGTGCCGGAGCG
GTGGTTCCCCGGGCGGTTCGACCTCGTCGGGCACAGCCACCAGCTGTTCCATCTCTTCGTCATTGCCGGCGCGTACGCGC
ACTAC---------------------------------------------------------------------------
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>chr5B_1661
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------------------GCGGTGGCCGATGTTCGCGTACCTGTGCGGAGCCATGGTGTGCCTACTTACGAGCAGCGCTT
GCCACCTGGTGCTGTGCCACTCGGAGAGAATGGCGTACGTGACGCTCCGGCTGGACTATGCCGGCATCGCCGCCCTGATC
GTCACCTCCTTCTACCCGGTCGTCTACTACTCCTTCCTCTGCCATCCGGGGCTGCAGCGGCTCTACATGGGCTTCATCAC
CGCCTTCGGCGCCGCGGCGGTCACGGCGTCGCTGGTGCCGGTGTTCCAGGCGCCCGAGTTCCGCCTGCTCCGCGCCGGGC
TCTTCTCATGCATGGGCGTGTCGGGGCTCATCCCCGTCGCGCACAAGCTCGTGCTGTACGGCGGCCGGCGGGAGGCCGCC
GTGACGGCGTGCTACGAGGCGCTCATGGGCGCGCTCTACGGGCTCGGCGCCGCCGTCTACGCGGCGCGCATGCCGGAGCG
GTGGTTCCCCGGGCGGTTCGACCTCGTCGGGCACAGCCACCAGCTGTTCCATCTATTCGTCATCGCCGGCGCGTACGCGC
ACTAC---------------------------------------------------------------------------
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>SNPs
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S--------------------------------------------------------------S----------------
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----------------------S---S---------------------------SSSS----------S--------S-S
S-SSSSSSSSSSS-------------------------------------------------------------S-----
------------------------------------S-S-S-----S-S--S----------------------------
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-----------------------------------------------S------------------SS------------
---------------------------S----------------------------------------SSSSSSSSS---
---------------------------------------------------S--S-------------------------
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-----------------S--------------------------------------------------------------
---------S---------------------------------------------------S--------------SS--
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------------------------------------------------------S---S---------S--S----S---
-------S----------------------S---------S---------------------------------------
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---------S----------------------------------------------------------------------
----------------------------------------------------------------S---------------
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---------------------------------------------------------------------------S----
-----------------------------------------------------------------S--------------
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--------------------------------------------------------------------S-----------
-SS--------S-----------------------------------------------------------S--------
---------------------S------------------------------------SSSSSSSSSSSSS---S-----
---SSSSSSSSSSSSSSSSS-----------S----S------SS-S-SS-SSSSSS-S-SSSS-S--------------
--------------------------------------------------------------------------------
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---SS--------------S-S---S----------S----------S------S-S----S-------S-------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_757
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-----------------CGGGAACAACGACAGGCTAT-------------------------------------------
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>reverse_2651
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----------AAGCATCTCGAGCCGAAACT--------------------------------------------------
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------------------------------------------------------------------------------
