Multiple sequence alignment - TraesCS4D01G211000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G211000 chr4D 100.000 2534 0 0 1 2534 363583349 363580816 0.000000e+00 4680.0
1 TraesCS4D01G211000 chr4B 91.437 981 55 17 827 1792 448886080 448885114 0.000000e+00 1319.0
2 TraesCS4D01G211000 chr4B 84.514 833 78 19 3 812 448886946 448886142 0.000000e+00 776.0
3 TraesCS4D01G211000 chr4B 90.431 209 14 2 1829 2031 448885027 448884819 1.160000e-68 270.0
4 TraesCS4D01G211000 chr4B 81.070 243 36 4 444 683 481634149 481633914 4.300000e-43 185.0
5 TraesCS4D01G211000 chr4B 93.407 91 5 1 2039 2128 448884759 448884669 1.580000e-27 134.0
6 TraesCS4D01G211000 chr4B 94.872 39 2 0 810 848 448886128 448886090 7.570000e-06 62.1
7 TraesCS4D01G211000 chr4A 92.801 889 47 9 913 1789 101954790 101955673 0.000000e+00 1271.0
8 TraesCS4D01G211000 chr4A 87.976 499 55 4 5 502 101946930 101947424 3.630000e-163 584.0
9 TraesCS4D01G211000 chr4A 83.587 329 44 7 552 876 101954169 101954491 1.470000e-77 300.0
10 TraesCS4D01G211000 chr4A 90.265 113 6 4 1829 1937 101955760 101955871 2.630000e-30 143.0
11 TraesCS4D01G211000 chr4A 100.000 28 0 0 1802 1829 101955660 101955687 5.000000e-03 52.8
12 TraesCS4D01G211000 chr2D 85.782 211 26 4 1358 1567 385569562 385569769 1.180000e-53 220.0
13 TraesCS4D01G211000 chr2D 80.335 239 37 5 439 674 184851363 184851594 3.350000e-39 172.0
14 TraesCS4D01G211000 chr2D 77.143 210 38 4 439 645 36200638 36200436 2.060000e-21 113.0
15 TraesCS4D01G211000 chr3B 83.065 248 32 4 439 683 64251681 64251921 1.530000e-52 217.0
16 TraesCS4D01G211000 chr2B 82.661 248 33 4 439 683 300253032 300252792 7.100000e-51 211.0
17 TraesCS4D01G211000 chr2B 86.387 191 26 0 1358 1548 456589747 456589937 2.550000e-50 209.0
18 TraesCS4D01G211000 chr2B 76.923 247 47 4 439 683 28361431 28361193 5.690000e-27 132.0
19 TraesCS4D01G211000 chr7D 82.258 248 34 7 439 683 611665100 611664860 3.300000e-49 206.0
20 TraesCS4D01G211000 chr7A 80.645 248 37 5 439 683 711779402 711779163 5.570000e-42 182.0
21 TraesCS4D01G211000 chr5D 80.478 251 38 5 437 683 529058537 529058294 5.570000e-42 182.0
22 TraesCS4D01G211000 chr5D 80.645 217 33 3 440 654 3748629 3748838 2.610000e-35 159.0
23 TraesCS4D01G211000 chr2A 81.281 203 35 3 1358 1559 521507705 521507905 7.250000e-36 161.0
24 TraesCS4D01G211000 chr1D 82.639 144 18 1 439 582 293591683 293591547 1.230000e-23 121.0
25 TraesCS4D01G211000 chr3A 87.000 100 10 3 1461 1559 494432684 494432781 2.670000e-20 110.0
26 TraesCS4D01G211000 chr3A 84.259 108 13 4 1461 1567 503056135 503056239 4.460000e-18 102.0
27 TraesCS4D01G211000 chr3A 92.424 66 4 1 2469 2534 14821248 14821184 2.680000e-15 93.5
28 TraesCS4D01G211000 chr1A 88.764 89 8 2 1461 1548 280001504 280001591 9.590000e-20 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G211000 chr4D 363580816 363583349 2533 True 4680.00 4680 100.00000 1 2534 1 chr4D.!!$R1 2533
1 TraesCS4D01G211000 chr4B 448884669 448886946 2277 True 512.22 1319 90.93220 3 2128 5 chr4B.!!$R2 2125
2 TraesCS4D01G211000 chr4A 101954169 101955871 1702 False 441.70 1271 91.66325 552 1937 4 chr4A.!!$F2 1385

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
271 272 0.040425 CGGTTGTGAAAGGCTTTCCG 60.04 55.0 31.17 24.73 38.9 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2047 2546 0.2993 CGTTGCGAACAGTCACGAAA 59.701 50.0 0.0 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.425773 CTGCGCGTGTGTTTCAGC 60.426 61.111 8.43 0.00 0.00 4.26
47 48 1.453015 TGTGTTTCAGCGGCAACCT 60.453 52.632 1.45 0.00 0.00 3.50
60 61 1.597854 CAACCTGCCACGAAGAGCA 60.598 57.895 0.00 0.00 37.90 4.26
99 100 2.322161 CGCCATTGCTGTGAAAAAGAG 58.678 47.619 0.00 0.00 34.43 2.85
105 106 5.687285 CCATTGCTGTGAAAAAGAGTTGTAC 59.313 40.000 0.00 0.00 0.00 2.90
106 107 5.888691 TTGCTGTGAAAAAGAGTTGTACA 57.111 34.783 0.00 0.00 0.00 2.90
112 113 7.913297 GCTGTGAAAAAGAGTTGTACACAATTA 59.087 33.333 0.00 0.00 38.24 1.40
113 114 9.781834 CTGTGAAAAAGAGTTGTACACAATTAA 57.218 29.630 0.00 0.00 38.24 1.40
141 142 3.704061 TCAGGCACAAAATATAAAGGGGC 59.296 43.478 0.00 0.00 0.00 5.80
150 151 9.981114 CACAAAATATAAAGGGGCCTAATAAAG 57.019 33.333 0.84 0.00 0.00 1.85
176 177 0.107703 GGTGGGAGTTGATGCGATGA 60.108 55.000 0.00 0.00 0.00 2.92
182 183 4.202346 TGGGAGTTGATGCGATGATAATGA 60.202 41.667 0.00 0.00 0.00 2.57
183 184 4.391216 GGGAGTTGATGCGATGATAATGAG 59.609 45.833 0.00 0.00 0.00 2.90
184 185 4.993584 GGAGTTGATGCGATGATAATGAGT 59.006 41.667 0.00 0.00 0.00 3.41
185 186 5.468072 GGAGTTGATGCGATGATAATGAGTT 59.532 40.000 0.00 0.00 0.00 3.01
186 187 6.017605 GGAGTTGATGCGATGATAATGAGTTT 60.018 38.462 0.00 0.00 0.00 2.66
187 188 6.722301 AGTTGATGCGATGATAATGAGTTTG 58.278 36.000 0.00 0.00 0.00 2.93
188 189 6.539826 AGTTGATGCGATGATAATGAGTTTGA 59.460 34.615 0.00 0.00 0.00 2.69
189 190 6.535274 TGATGCGATGATAATGAGTTTGAG 57.465 37.500 0.00 0.00 0.00 3.02
190 191 4.801147 TGCGATGATAATGAGTTTGAGC 57.199 40.909 0.00 0.00 0.00 4.26
191 192 4.190772 TGCGATGATAATGAGTTTGAGCA 58.809 39.130 0.00 0.00 0.00 4.26
192 193 4.271776 TGCGATGATAATGAGTTTGAGCAG 59.728 41.667 0.00 0.00 0.00 4.24
193 194 4.272018 GCGATGATAATGAGTTTGAGCAGT 59.728 41.667 0.00 0.00 0.00 4.40
194 195 5.735324 CGATGATAATGAGTTTGAGCAGTG 58.265 41.667 0.00 0.00 0.00 3.66
195 196 5.521372 CGATGATAATGAGTTTGAGCAGTGA 59.479 40.000 0.00 0.00 0.00 3.41
196 197 6.202379 CGATGATAATGAGTTTGAGCAGTGAT 59.798 38.462 0.00 0.00 0.00 3.06
197 198 7.383300 CGATGATAATGAGTTTGAGCAGTGATA 59.617 37.037 0.00 0.00 0.00 2.15
198 199 7.776933 TGATAATGAGTTTGAGCAGTGATAC 57.223 36.000 0.00 0.00 0.00 2.24
199 200 7.559486 TGATAATGAGTTTGAGCAGTGATACT 58.441 34.615 0.00 0.00 0.00 2.12
240 241 5.865013 GTGAACAAGAGCCTTCTACTAGTTC 59.135 44.000 0.00 0.00 34.80 3.01
242 243 6.946583 TGAACAAGAGCCTTCTACTAGTTCTA 59.053 38.462 0.00 0.00 35.02 2.10
250 251 4.201930 CCTTCTACTAGTTCTAGTGTGGCG 60.202 50.000 19.04 6.85 0.00 5.69
271 272 0.040425 CGGTTGTGAAAGGCTTTCCG 60.040 55.000 31.17 24.73 38.90 4.30
284 285 0.865769 CTTTCCGGACGACTTGTTGG 59.134 55.000 1.83 0.00 0.00 3.77
289 290 0.944311 CGGACGACTTGTTGGGAGTG 60.944 60.000 0.00 0.00 0.00 3.51
299 315 0.251787 GTTGGGAGTGGGGCATCTTT 60.252 55.000 0.00 0.00 0.00 2.52
303 319 1.005450 GGGAGTGGGGCATCTTTAACA 59.995 52.381 0.00 0.00 0.00 2.41
304 320 2.358195 GGGAGTGGGGCATCTTTAACAT 60.358 50.000 0.00 0.00 0.00 2.71
309 325 2.042297 TGGGGCATCTTTAACATGGACA 59.958 45.455 0.00 0.00 0.00 4.02
316 332 6.756542 GGCATCTTTAACATGGACATAAAACC 59.243 38.462 0.00 0.00 0.00 3.27
332 348 4.491234 AAAACCGTTCGCATATGTTTGA 57.509 36.364 4.29 0.00 0.00 2.69
343 359 1.149987 TATGTTTGAACCGCGGTGTC 58.850 50.000 34.95 28.37 0.00 3.67
344 360 1.512156 ATGTTTGAACCGCGGTGTCC 61.512 55.000 34.95 23.63 0.00 4.02
349 365 2.047274 AACCGCGGTGTCCAGATG 60.047 61.111 34.95 0.00 0.00 2.90
366 382 3.193903 CAGATGTTTTGTGCCATCCATCA 59.806 43.478 0.00 0.00 38.57 3.07
375 391 0.392998 GCCATCCATCACGGTCTTGT 60.393 55.000 0.00 0.00 35.57 3.16
385 401 1.588139 CGGTCTTGTATCGGTCCGC 60.588 63.158 6.34 0.00 0.00 5.54
399 415 2.249692 TCCGCAAAATGGTTCGGAC 58.750 52.632 0.00 0.00 44.99 4.79
412 428 0.319555 TTCGGACGCACTTTCTCCTG 60.320 55.000 0.00 0.00 0.00 3.86
428 444 9.529325 ACTTTCTCCTGCAAACTAAAAATAAAC 57.471 29.630 0.00 0.00 0.00 2.01
429 445 8.568732 TTTCTCCTGCAAACTAAAAATAAACG 57.431 30.769 0.00 0.00 0.00 3.60
430 446 7.266922 TCTCCTGCAAACTAAAAATAAACGT 57.733 32.000 0.00 0.00 0.00 3.99
431 447 8.380743 TCTCCTGCAAACTAAAAATAAACGTA 57.619 30.769 0.00 0.00 0.00 3.57
432 448 8.500773 TCTCCTGCAAACTAAAAATAAACGTAG 58.499 33.333 0.00 0.00 0.00 3.51
433 449 8.380743 TCCTGCAAACTAAAAATAAACGTAGA 57.619 30.769 0.00 0.00 0.00 2.59
435 451 8.500773 CCTGCAAACTAAAAATAAACGTAGAGA 58.499 33.333 0.00 0.00 0.00 3.10
437 453 8.284693 TGCAAACTAAAAATAAACGTAGAGACC 58.715 33.333 0.00 0.00 0.00 3.85
439 455 9.807386 CAAACTAAAAATAAACGTAGAGACCTG 57.193 33.333 0.00 0.00 0.00 4.00
486 502 2.650608 GTTCAACGACAATGGCTTCAC 58.349 47.619 0.00 0.00 0.00 3.18
512 528 4.323569 AGTGAGTCATCTTAGAGGTCCA 57.676 45.455 0.00 0.00 0.00 4.02
531 547 2.355756 CCACAAAGCTGCATATTAGCGT 59.644 45.455 1.02 0.00 45.61 5.07
556 572 3.471244 ATGTAGCCGCGTCGAGCTC 62.471 63.158 10.89 2.73 45.59 4.09
617 634 2.741092 GGTGGTGCCGAAGACAGA 59.259 61.111 0.00 0.00 0.00 3.41
619 636 0.535335 GGTGGTGCCGAAGACAGATA 59.465 55.000 0.00 0.00 0.00 1.98
623 640 2.236146 TGGTGCCGAAGACAGATAACAT 59.764 45.455 0.00 0.00 0.00 2.71
638 655 4.515191 AGATAACATGCGTTTGTGTCAAGT 59.485 37.500 0.00 0.00 36.52 3.16
640 657 3.502191 ACATGCGTTTGTGTCAAGTTT 57.498 38.095 0.00 0.00 0.00 2.66
641 658 3.178267 ACATGCGTTTGTGTCAAGTTTG 58.822 40.909 0.00 0.00 0.00 2.93
650 667 5.913137 TTGTGTCAAGTTTGGAGATGTTT 57.087 34.783 0.00 0.00 0.00 2.83
667 686 9.581099 GGAGATGTTTTGTTCTTTTCAGTTTTA 57.419 29.630 0.00 0.00 0.00 1.52
693 712 4.188462 TGTTCGTCCTTATTATGTGGCTG 58.812 43.478 0.00 0.00 0.00 4.85
700 719 7.614192 TCGTCCTTATTATGTGGCTGAGATATA 59.386 37.037 0.00 0.00 0.00 0.86
708 727 9.887629 ATTATGTGGCTGAGATATAAATGAGAG 57.112 33.333 0.00 0.00 0.00 3.20
710 729 6.753180 TGTGGCTGAGATATAAATGAGAGAC 58.247 40.000 0.00 0.00 0.00 3.36
711 730 6.324770 TGTGGCTGAGATATAAATGAGAGACA 59.675 38.462 0.00 0.00 0.00 3.41
730 752 8.943909 AGAGACATATTACCGGTAAAGAAAAG 57.056 34.615 29.74 17.87 0.00 2.27
877 946 6.961361 TCCTGATCTAGAAGGCTCTCTATA 57.039 41.667 5.68 2.27 33.25 1.31
899 1247 5.730296 ATATATTCGTCCTGGAGGTTCAG 57.270 43.478 15.40 0.00 36.34 3.02
902 1250 1.835494 TCGTCCTGGAGGTTCAGTAG 58.165 55.000 15.40 0.00 36.34 2.57
903 1251 1.075050 TCGTCCTGGAGGTTCAGTAGT 59.925 52.381 15.40 0.00 36.34 2.73
904 1252 2.306805 TCGTCCTGGAGGTTCAGTAGTA 59.693 50.000 15.40 0.00 36.34 1.82
905 1253 2.422832 CGTCCTGGAGGTTCAGTAGTAC 59.577 54.545 8.22 0.00 36.34 2.73
906 1254 3.428532 GTCCTGGAGGTTCAGTAGTACA 58.571 50.000 0.00 0.00 36.34 2.90
907 1255 3.830755 GTCCTGGAGGTTCAGTAGTACAA 59.169 47.826 0.00 0.00 36.34 2.41
908 1256 3.830755 TCCTGGAGGTTCAGTAGTACAAC 59.169 47.826 2.52 0.00 36.34 3.32
937 1285 2.090658 CGCATCACGCTATTATTCGTCC 59.909 50.000 0.00 0.00 39.08 4.79
948 1296 6.195165 GCTATTATTCGTCCTCTTGCAAAAG 58.805 40.000 0.00 0.00 0.00 2.27
1029 1377 2.203523 TGGTGGGACTCCGACGAA 60.204 61.111 0.00 0.00 46.43 3.85
1030 1378 1.833492 TGGTGGGACTCCGACGAAA 60.833 57.895 0.00 0.00 46.43 3.46
1040 1388 2.470286 CGACGAAAACCGCTCTGC 59.530 61.111 0.00 0.00 43.32 4.26
1151 1502 3.680842 ACGTGAGTGGGTTTCAGAC 57.319 52.632 0.00 0.00 46.97 3.51
1164 1515 4.099419 GGGTTTCAGACTTTTGGTTGATGT 59.901 41.667 0.00 0.00 0.00 3.06
1167 1518 7.175990 GGGTTTCAGACTTTTGGTTGATGTATA 59.824 37.037 0.00 0.00 0.00 1.47
1168 1519 8.739972 GGTTTCAGACTTTTGGTTGATGTATAT 58.260 33.333 0.00 0.00 0.00 0.86
1175 1526 6.258727 ACTTTTGGTTGATGTATATGCTCGAG 59.741 38.462 8.45 8.45 0.00 4.04
1187 1542 1.315981 TGCTCGAGGGTGCTAGACTG 61.316 60.000 15.58 0.00 33.89 3.51
1202 1557 3.360249 AGACTGTGATGCTTTTGTTGC 57.640 42.857 0.00 0.00 0.00 4.17
1239 1594 5.292589 TCTGTACAGTTTTCCTCGTTGTTTC 59.707 40.000 21.99 0.00 0.00 2.78
1248 1603 2.301009 TCCTCGTTGTTTCCTAGGGTTC 59.699 50.000 9.46 0.00 0.00 3.62
1290 1645 4.685628 CCGCATTGATTTTGCTTGTTAGTT 59.314 37.500 0.00 0.00 37.96 2.24
1343 1701 2.086094 TGCCTAACACGATCGTACTGA 58.914 47.619 22.26 5.81 0.00 3.41
1452 1810 1.210155 GTTGAGCAACGCCATCCAC 59.790 57.895 0.00 0.00 0.00 4.02
1573 1935 4.114997 GCCCGGGCATTCACGTTG 62.115 66.667 40.73 0.15 41.49 4.10
1658 2020 4.147322 CGATTGTCCGTGGTGCGC 62.147 66.667 0.00 0.00 39.71 6.09
1698 2061 9.979270 GATTGTTGAACATCTAGTCTTTACATG 57.021 33.333 0.00 0.00 0.00 3.21
1759 2122 4.459330 GAAGCCAAGCCTAATCATCTCTT 58.541 43.478 0.00 0.00 0.00 2.85
1779 2142 8.012957 TCTCTTAAGTTGAGAGATAACATCCC 57.987 38.462 20.32 0.00 43.43 3.85
1780 2143 7.619698 TCTCTTAAGTTGAGAGATAACATCCCA 59.380 37.037 20.32 0.00 43.43 4.37
1781 2144 7.786030 TCTTAAGTTGAGAGATAACATCCCAG 58.214 38.462 1.63 0.00 0.00 4.45
1782 2145 7.619698 TCTTAAGTTGAGAGATAACATCCCAGA 59.380 37.037 1.63 0.00 0.00 3.86
1783 2146 5.867903 AGTTGAGAGATAACATCCCAGAG 57.132 43.478 0.00 0.00 0.00 3.35
1784 2147 5.276440 AGTTGAGAGATAACATCCCAGAGT 58.724 41.667 0.00 0.00 0.00 3.24
1785 2148 5.723887 AGTTGAGAGATAACATCCCAGAGTT 59.276 40.000 0.00 0.00 0.00 3.01
1786 2149 6.214412 AGTTGAGAGATAACATCCCAGAGTTT 59.786 38.462 0.00 0.00 0.00 2.66
1787 2150 6.627087 TGAGAGATAACATCCCAGAGTTTT 57.373 37.500 0.00 0.00 0.00 2.43
1788 2151 7.020827 TGAGAGATAACATCCCAGAGTTTTT 57.979 36.000 0.00 0.00 0.00 1.94
1855 2295 5.567138 AACAAAGGACTGAAACTGAACAG 57.433 39.130 0.00 0.00 39.65 3.16
1905 2348 2.223745 TCTTGTCCGGCTACCAAAAAC 58.776 47.619 0.00 0.00 0.00 2.43
1906 2349 2.158726 TCTTGTCCGGCTACCAAAAACT 60.159 45.455 0.00 0.00 0.00 2.66
1912 2355 3.700038 TCCGGCTACCAAAAACTTTTTGA 59.300 39.130 23.11 7.97 0.00 2.69
1942 2385 2.539547 CGGCTGCAAATTAAGGATGTCG 60.540 50.000 0.50 0.00 0.00 4.35
1943 2386 2.454055 GCTGCAAATTAAGGATGTCGC 58.546 47.619 0.00 0.00 0.00 5.19
1944 2387 2.098117 GCTGCAAATTAAGGATGTCGCT 59.902 45.455 0.00 0.00 0.00 4.93
1945 2388 3.688272 CTGCAAATTAAGGATGTCGCTG 58.312 45.455 0.00 0.00 0.00 5.18
1946 2389 2.159393 TGCAAATTAAGGATGTCGCTGC 60.159 45.455 0.00 0.00 0.00 5.25
1947 2390 2.098117 GCAAATTAAGGATGTCGCTGCT 59.902 45.455 0.00 0.00 0.00 4.24
1950 2397 4.622701 AATTAAGGATGTCGCTGCTTTC 57.377 40.909 0.00 0.00 0.00 2.62
1963 2410 2.700773 GCTTTCACATCCGGGGTGC 61.701 63.158 18.73 6.83 36.22 5.01
1964 2411 2.034999 TTTCACATCCGGGGTGCC 59.965 61.111 18.73 0.00 36.22 5.01
2063 2563 0.179094 ACCTTTCGTGACTGTTCGCA 60.179 50.000 2.40 0.00 32.00 5.10
2115 2615 2.203126 GCAGAAGCCCCTCCATCG 60.203 66.667 0.00 0.00 33.58 3.84
2139 2639 5.905903 CACGATTTGTGTCTTACTCTTGAC 58.094 41.667 0.00 0.00 43.88 3.18
2140 2640 5.692204 CACGATTTGTGTCTTACTCTTGACT 59.308 40.000 0.00 0.00 43.88 3.41
2141 2641 6.861572 CACGATTTGTGTCTTACTCTTGACTA 59.138 38.462 0.00 0.00 43.88 2.59
2142 2642 7.061210 CACGATTTGTGTCTTACTCTTGACTAG 59.939 40.741 0.00 0.00 43.88 2.57
2143 2643 7.040617 ACGATTTGTGTCTTACTCTTGACTAGA 60.041 37.037 0.00 0.00 34.57 2.43
2144 2644 7.971168 CGATTTGTGTCTTACTCTTGACTAGAT 59.029 37.037 0.00 0.00 34.57 1.98
2145 2645 8.994429 ATTTGTGTCTTACTCTTGACTAGATG 57.006 34.615 0.00 0.00 34.57 2.90
2146 2646 7.761038 TTGTGTCTTACTCTTGACTAGATGA 57.239 36.000 0.00 0.00 34.57 2.92
2147 2647 7.946381 TGTGTCTTACTCTTGACTAGATGAT 57.054 36.000 0.00 0.00 34.57 2.45
2148 2648 8.354711 TGTGTCTTACTCTTGACTAGATGATT 57.645 34.615 0.00 0.00 34.57 2.57
2149 2649 8.462811 TGTGTCTTACTCTTGACTAGATGATTC 58.537 37.037 0.00 0.00 34.57 2.52
2150 2650 7.918562 GTGTCTTACTCTTGACTAGATGATTCC 59.081 40.741 0.00 0.00 34.57 3.01
2151 2651 7.068839 TGTCTTACTCTTGACTAGATGATTCCC 59.931 40.741 0.00 0.00 34.57 3.97
2152 2652 6.551601 TCTTACTCTTGACTAGATGATTCCCC 59.448 42.308 0.00 0.00 30.92 4.81
2153 2653 4.624913 ACTCTTGACTAGATGATTCCCCA 58.375 43.478 0.00 0.00 30.92 4.96
2154 2654 4.653341 ACTCTTGACTAGATGATTCCCCAG 59.347 45.833 0.00 0.00 30.92 4.45
2155 2655 3.969976 TCTTGACTAGATGATTCCCCAGG 59.030 47.826 0.00 0.00 0.00 4.45
2156 2656 3.706389 TGACTAGATGATTCCCCAGGA 57.294 47.619 0.00 0.00 0.00 3.86
2157 2657 3.581101 TGACTAGATGATTCCCCAGGAG 58.419 50.000 0.00 0.00 31.21 3.69
2158 2658 3.051803 TGACTAGATGATTCCCCAGGAGT 60.052 47.826 0.00 0.00 31.21 3.85
2159 2659 3.970640 GACTAGATGATTCCCCAGGAGTT 59.029 47.826 0.00 0.00 31.21 3.01
2160 2660 3.970640 ACTAGATGATTCCCCAGGAGTTC 59.029 47.826 0.00 0.00 31.21 3.01
2161 2661 3.142579 AGATGATTCCCCAGGAGTTCT 57.857 47.619 0.00 0.00 31.21 3.01
2162 2662 2.776536 AGATGATTCCCCAGGAGTTCTG 59.223 50.000 0.00 0.00 43.00 3.02
2195 2695 9.487790 TTTTTGCTAAAATTTAGAATGTGGAGG 57.512 29.630 16.22 0.00 0.00 4.30
2196 2696 8.415950 TTTGCTAAAATTTAGAATGTGGAGGA 57.584 30.769 16.22 0.00 0.00 3.71
2197 2697 8.415950 TTGCTAAAATTTAGAATGTGGAGGAA 57.584 30.769 16.22 0.00 0.00 3.36
2198 2698 8.593945 TGCTAAAATTTAGAATGTGGAGGAAT 57.406 30.769 16.22 0.00 0.00 3.01
2199 2699 9.693739 TGCTAAAATTTAGAATGTGGAGGAATA 57.306 29.630 16.22 0.00 0.00 1.75
2200 2700 9.952188 GCTAAAATTTAGAATGTGGAGGAATAC 57.048 33.333 16.22 0.00 0.00 1.89
2203 2703 9.533831 AAAATTTAGAATGTGGAGGAATACACT 57.466 29.630 0.00 0.00 38.39 3.55
2204 2704 8.511604 AATTTAGAATGTGGAGGAATACACTG 57.488 34.615 0.00 0.00 38.39 3.66
2205 2705 6.620877 TTAGAATGTGGAGGAATACACTGT 57.379 37.500 0.00 0.00 38.39 3.55
2206 2706 4.836825 AGAATGTGGAGGAATACACTGTG 58.163 43.478 6.19 6.19 38.39 3.66
2207 2707 4.287067 AGAATGTGGAGGAATACACTGTGT 59.713 41.667 18.51 18.51 38.39 3.72
2208 2708 5.483937 AGAATGTGGAGGAATACACTGTGTA 59.516 40.000 21.68 21.68 38.39 2.90
2209 2709 5.755409 ATGTGGAGGAATACACTGTGTAA 57.245 39.130 23.03 8.38 36.31 2.41
2210 2710 5.554437 TGTGGAGGAATACACTGTGTAAA 57.446 39.130 23.03 5.29 36.31 2.01
2211 2711 5.547465 TGTGGAGGAATACACTGTGTAAAG 58.453 41.667 23.03 0.00 36.31 1.85
2212 2712 5.305902 TGTGGAGGAATACACTGTGTAAAGA 59.694 40.000 23.03 4.15 36.31 2.52
2213 2713 6.183361 TGTGGAGGAATACACTGTGTAAAGAA 60.183 38.462 23.03 3.76 36.31 2.52
2214 2714 6.708949 GTGGAGGAATACACTGTGTAAAGAAA 59.291 38.462 23.03 3.01 36.31 2.52
2215 2715 7.227910 GTGGAGGAATACACTGTGTAAAGAAAA 59.772 37.037 23.03 2.26 36.31 2.29
2216 2716 7.776030 TGGAGGAATACACTGTGTAAAGAAAAA 59.224 33.333 23.03 1.51 36.31 1.94
2217 2717 8.793592 GGAGGAATACACTGTGTAAAGAAAAAT 58.206 33.333 23.03 3.91 36.31 1.82
2225 2725 8.129211 ACACTGTGTAAAGAAAAATAGACTTGC 58.871 33.333 12.53 0.00 0.00 4.01
2226 2726 8.345565 CACTGTGTAAAGAAAAATAGACTTGCT 58.654 33.333 0.00 0.00 0.00 3.91
2227 2727 8.903820 ACTGTGTAAAGAAAAATAGACTTGCTT 58.096 29.630 0.00 0.00 0.00 3.91
2228 2728 9.173939 CTGTGTAAAGAAAAATAGACTTGCTTG 57.826 33.333 0.00 0.00 0.00 4.01
2229 2729 8.682710 TGTGTAAAGAAAAATAGACTTGCTTGT 58.317 29.630 0.00 0.00 0.00 3.16
2230 2730 8.958043 GTGTAAAGAAAAATAGACTTGCTTGTG 58.042 33.333 0.00 0.00 0.00 3.33
2231 2731 8.682710 TGTAAAGAAAAATAGACTTGCTTGTGT 58.317 29.630 0.00 0.00 0.00 3.72
2232 2732 7.992180 AAAGAAAAATAGACTTGCTTGTGTG 57.008 32.000 0.00 0.00 0.00 3.82
2233 2733 6.699575 AGAAAAATAGACTTGCTTGTGTGT 57.300 33.333 0.00 0.00 0.00 3.72
2234 2734 6.729187 AGAAAAATAGACTTGCTTGTGTGTC 58.271 36.000 0.00 0.00 0.00 3.67
2235 2735 6.318648 AGAAAAATAGACTTGCTTGTGTGTCA 59.681 34.615 0.00 0.00 32.41 3.58
2236 2736 6.449635 AAAATAGACTTGCTTGTGTGTCAA 57.550 33.333 0.00 0.00 32.41 3.18
2237 2737 6.449635 AAATAGACTTGCTTGTGTGTCAAA 57.550 33.333 0.00 0.00 35.48 2.69
2238 2738 6.449635 AATAGACTTGCTTGTGTGTCAAAA 57.550 33.333 0.00 0.00 35.48 2.44
2239 2739 4.361451 AGACTTGCTTGTGTGTCAAAAG 57.639 40.909 0.00 0.00 35.48 2.27
2240 2740 3.758554 AGACTTGCTTGTGTGTCAAAAGT 59.241 39.130 2.33 0.00 38.80 2.66
2241 2741 4.218417 AGACTTGCTTGTGTGTCAAAAGTT 59.782 37.500 2.33 0.00 37.28 2.66
2242 2742 4.485163 ACTTGCTTGTGTGTCAAAAGTTC 58.515 39.130 2.33 0.00 35.08 3.01
2243 2743 4.022416 ACTTGCTTGTGTGTCAAAAGTTCA 60.022 37.500 2.33 0.00 35.08 3.18
2244 2744 4.511617 TGCTTGTGTGTCAAAAGTTCAA 57.488 36.364 2.33 0.00 35.48 2.69
2245 2745 4.876125 TGCTTGTGTGTCAAAAGTTCAAA 58.124 34.783 2.33 0.00 35.48 2.69
2246 2746 5.292765 TGCTTGTGTGTCAAAAGTTCAAAA 58.707 33.333 2.33 0.00 35.48 2.44
2247 2747 5.176590 TGCTTGTGTGTCAAAAGTTCAAAAC 59.823 36.000 2.33 0.00 35.48 2.43
2248 2748 5.176590 GCTTGTGTGTCAAAAGTTCAAAACA 59.823 36.000 2.33 0.00 35.48 2.83
2249 2749 6.128580 GCTTGTGTGTCAAAAGTTCAAAACAT 60.129 34.615 2.33 0.00 35.48 2.71
2250 2750 7.571059 GCTTGTGTGTCAAAAGTTCAAAACATT 60.571 33.333 2.33 0.00 35.48 2.71
2251 2751 7.721286 TGTGTGTCAAAAGTTCAAAACATTT 57.279 28.000 0.00 0.00 33.06 2.32
2252 2752 7.791949 TGTGTGTCAAAAGTTCAAAACATTTC 58.208 30.769 0.00 0.00 30.68 2.17
2253 2753 7.095439 TGTGTGTCAAAAGTTCAAAACATTTCC 60.095 33.333 0.00 0.00 30.68 3.13
2254 2754 6.370166 TGTGTCAAAAGTTCAAAACATTTCCC 59.630 34.615 0.00 0.00 30.68 3.97
2255 2755 6.593770 GTGTCAAAAGTTCAAAACATTTCCCT 59.406 34.615 0.00 0.00 30.68 4.20
2256 2756 7.119116 GTGTCAAAAGTTCAAAACATTTCCCTT 59.881 33.333 0.00 0.00 30.68 3.95
2257 2757 7.663493 TGTCAAAAGTTCAAAACATTTCCCTTT 59.337 29.630 0.00 0.00 30.68 3.11
2258 2758 8.175069 GTCAAAAGTTCAAAACATTTCCCTTTC 58.825 33.333 0.00 0.00 30.68 2.62
2259 2759 6.902224 AAAGTTCAAAACATTTCCCTTTCG 57.098 33.333 0.00 0.00 0.00 3.46
2260 2760 5.592104 AGTTCAAAACATTTCCCTTTCGT 57.408 34.783 0.00 0.00 0.00 3.85
2261 2761 5.348164 AGTTCAAAACATTTCCCTTTCGTG 58.652 37.500 0.00 0.00 0.00 4.35
2262 2762 4.993029 TCAAAACATTTCCCTTTCGTGT 57.007 36.364 0.00 0.00 0.00 4.49
2263 2763 4.677584 TCAAAACATTTCCCTTTCGTGTG 58.322 39.130 0.00 0.00 0.00 3.82
2264 2764 3.726291 AAACATTTCCCTTTCGTGTGG 57.274 42.857 0.00 0.00 0.00 4.17
2265 2765 2.649531 ACATTTCCCTTTCGTGTGGA 57.350 45.000 0.00 0.00 0.00 4.02
2266 2766 2.938838 ACATTTCCCTTTCGTGTGGAA 58.061 42.857 0.00 0.00 36.40 3.53
2269 2769 3.786516 TTTCCCTTTCGTGTGGAAAAC 57.213 42.857 0.00 0.00 43.30 2.43
2270 2770 2.421751 TCCCTTTCGTGTGGAAAACA 57.578 45.000 0.00 0.00 43.73 2.83
2271 2771 2.938838 TCCCTTTCGTGTGGAAAACAT 58.061 42.857 0.00 0.00 43.73 2.71
2272 2772 4.088056 TCCCTTTCGTGTGGAAAACATA 57.912 40.909 0.00 0.00 43.73 2.29
2273 2773 4.658063 TCCCTTTCGTGTGGAAAACATAT 58.342 39.130 0.00 0.00 43.73 1.78
2274 2774 4.698304 TCCCTTTCGTGTGGAAAACATATC 59.302 41.667 0.00 0.00 43.73 1.63
2275 2775 4.700213 CCCTTTCGTGTGGAAAACATATCT 59.300 41.667 0.00 0.00 43.73 1.98
2276 2776 5.183140 CCCTTTCGTGTGGAAAACATATCTT 59.817 40.000 0.00 0.00 43.73 2.40
2277 2777 6.314784 CCTTTCGTGTGGAAAACATATCTTC 58.685 40.000 0.00 0.00 43.73 2.87
2278 2778 5.873179 TTCGTGTGGAAAACATATCTTCC 57.127 39.130 0.00 0.00 41.97 3.46
2279 2779 5.160607 TCGTGTGGAAAACATATCTTCCT 57.839 39.130 8.51 0.00 41.97 3.36
2280 2780 6.288941 TCGTGTGGAAAACATATCTTCCTA 57.711 37.500 8.51 0.00 41.97 2.94
2281 2781 6.703319 TCGTGTGGAAAACATATCTTCCTAA 58.297 36.000 8.51 0.00 41.97 2.69
2282 2782 7.335627 TCGTGTGGAAAACATATCTTCCTAAT 58.664 34.615 8.51 0.00 41.97 1.73
2283 2783 7.279981 TCGTGTGGAAAACATATCTTCCTAATG 59.720 37.037 8.51 0.00 41.97 1.90
2284 2784 7.065803 CGTGTGGAAAACATATCTTCCTAATGT 59.934 37.037 8.51 0.00 41.97 2.71
2285 2785 8.398665 GTGTGGAAAACATATCTTCCTAATGTC 58.601 37.037 8.51 0.00 41.97 3.06
2286 2786 8.106462 TGTGGAAAACATATCTTCCTAATGTCA 58.894 33.333 8.51 0.00 41.52 3.58
2287 2787 9.125026 GTGGAAAACATATCTTCCTAATGTCAT 57.875 33.333 8.51 0.00 41.52 3.06
2296 2796 9.851686 ATATCTTCCTAATGTCATACAAAAGCA 57.148 29.630 0.00 0.00 0.00 3.91
2297 2797 8.757982 ATCTTCCTAATGTCATACAAAAGCAT 57.242 30.769 0.00 0.00 0.00 3.79
2298 2798 8.213518 TCTTCCTAATGTCATACAAAAGCATC 57.786 34.615 0.00 0.00 0.00 3.91
2299 2799 6.942532 TCCTAATGTCATACAAAAGCATCC 57.057 37.500 0.00 0.00 0.00 3.51
2300 2800 6.422333 TCCTAATGTCATACAAAAGCATCCA 58.578 36.000 0.00 0.00 0.00 3.41
2301 2801 6.543465 TCCTAATGTCATACAAAAGCATCCAG 59.457 38.462 0.00 0.00 0.00 3.86
2302 2802 6.543465 CCTAATGTCATACAAAAGCATCCAGA 59.457 38.462 0.00 0.00 0.00 3.86
2303 2803 6.839124 AATGTCATACAAAAGCATCCAGAA 57.161 33.333 0.00 0.00 0.00 3.02
2304 2804 5.885230 TGTCATACAAAAGCATCCAGAAG 57.115 39.130 0.00 0.00 0.00 2.85
2305 2805 5.316167 TGTCATACAAAAGCATCCAGAAGT 58.684 37.500 0.00 0.00 0.00 3.01
2306 2806 6.472016 TGTCATACAAAAGCATCCAGAAGTA 58.528 36.000 0.00 0.00 0.00 2.24
2307 2807 6.939730 TGTCATACAAAAGCATCCAGAAGTAA 59.060 34.615 0.00 0.00 0.00 2.24
2308 2808 7.094805 TGTCATACAAAAGCATCCAGAAGTAAC 60.095 37.037 0.00 0.00 0.00 2.50
2309 2809 6.939730 TCATACAAAAGCATCCAGAAGTAACA 59.060 34.615 0.00 0.00 0.00 2.41
2310 2810 5.695851 ACAAAAGCATCCAGAAGTAACAG 57.304 39.130 0.00 0.00 0.00 3.16
2311 2811 5.133221 ACAAAAGCATCCAGAAGTAACAGT 58.867 37.500 0.00 0.00 0.00 3.55
2312 2812 5.594317 ACAAAAGCATCCAGAAGTAACAGTT 59.406 36.000 0.00 0.00 0.00 3.16
2313 2813 5.695851 AAAGCATCCAGAAGTAACAGTTG 57.304 39.130 0.00 0.00 0.00 3.16
2314 2814 4.357918 AGCATCCAGAAGTAACAGTTGT 57.642 40.909 0.00 0.00 0.00 3.32
2315 2815 4.067896 AGCATCCAGAAGTAACAGTTGTG 58.932 43.478 0.00 0.00 0.00 3.33
2316 2816 3.815401 GCATCCAGAAGTAACAGTTGTGT 59.185 43.478 0.00 0.00 39.19 3.72
2318 2818 5.468746 GCATCCAGAAGTAACAGTTGTGTTA 59.531 40.000 0.00 0.00 45.48 2.41
2343 2843 4.883083 TGCTATTATCTTAGTTCCCTGCG 58.117 43.478 0.00 0.00 0.00 5.18
2344 2844 3.680458 GCTATTATCTTAGTTCCCTGCGC 59.320 47.826 0.00 0.00 0.00 6.09
2345 2845 4.561734 GCTATTATCTTAGTTCCCTGCGCT 60.562 45.833 9.73 0.00 0.00 5.92
2346 2846 2.890808 TATCTTAGTTCCCTGCGCTG 57.109 50.000 9.73 8.47 0.00 5.18
2347 2847 0.462759 ATCTTAGTTCCCTGCGCTGC 60.463 55.000 9.73 0.00 0.00 5.25
2348 2848 2.434185 TTAGTTCCCTGCGCTGCG 60.434 61.111 19.17 19.17 0.00 5.18
2361 2861 2.806288 CGCTGCGCTAAACAACTATT 57.194 45.000 9.88 0.00 0.00 1.73
2362 2862 2.694043 CGCTGCGCTAAACAACTATTC 58.306 47.619 9.88 0.00 0.00 1.75
2363 2863 2.348666 CGCTGCGCTAAACAACTATTCT 59.651 45.455 9.88 0.00 0.00 2.40
2364 2864 3.181520 CGCTGCGCTAAACAACTATTCTT 60.182 43.478 9.88 0.00 0.00 2.52
2365 2865 4.032445 CGCTGCGCTAAACAACTATTCTTA 59.968 41.667 9.88 0.00 0.00 2.10
2366 2866 5.276868 CGCTGCGCTAAACAACTATTCTTAT 60.277 40.000 9.88 0.00 0.00 1.73
2367 2867 6.487103 GCTGCGCTAAACAACTATTCTTATT 58.513 36.000 9.73 0.00 0.00 1.40
2368 2868 6.967199 GCTGCGCTAAACAACTATTCTTATTT 59.033 34.615 9.73 0.00 0.00 1.40
2369 2869 7.484959 GCTGCGCTAAACAACTATTCTTATTTT 59.515 33.333 9.73 0.00 0.00 1.82
2370 2870 9.341899 CTGCGCTAAACAACTATTCTTATTTTT 57.658 29.630 9.73 0.00 0.00 1.94
2387 2887 9.547753 TCTTATTTTTAGAGGATCGGAAAGATG 57.452 33.333 0.00 0.00 42.67 2.90
2388 2888 9.547753 CTTATTTTTAGAGGATCGGAAAGATGA 57.452 33.333 0.00 0.00 42.67 2.92
2389 2889 7.793927 ATTTTTAGAGGATCGGAAAGATGAC 57.206 36.000 0.00 0.00 42.67 3.06
2390 2890 4.569761 TTAGAGGATCGGAAAGATGACG 57.430 45.455 0.00 0.00 42.67 4.35
2391 2891 2.656002 AGAGGATCGGAAAGATGACGA 58.344 47.619 0.00 0.00 42.67 4.20
2392 2892 2.621055 AGAGGATCGGAAAGATGACGAG 59.379 50.000 0.00 0.00 42.67 4.18
2393 2893 1.683917 AGGATCGGAAAGATGACGAGG 59.316 52.381 0.00 0.00 40.26 4.63
2394 2894 1.269831 GGATCGGAAAGATGACGAGGG 60.270 57.143 0.00 0.00 40.26 4.30
2395 2895 0.753262 ATCGGAAAGATGACGAGGGG 59.247 55.000 0.00 0.00 40.21 4.79
2396 2896 0.613853 TCGGAAAGATGACGAGGGGT 60.614 55.000 0.00 0.00 32.29 4.95
2397 2897 1.108776 CGGAAAGATGACGAGGGGTA 58.891 55.000 0.00 0.00 0.00 3.69
2398 2898 1.479323 CGGAAAGATGACGAGGGGTAA 59.521 52.381 0.00 0.00 0.00 2.85
2399 2899 2.102588 CGGAAAGATGACGAGGGGTAAT 59.897 50.000 0.00 0.00 0.00 1.89
2400 2900 3.319972 CGGAAAGATGACGAGGGGTAATA 59.680 47.826 0.00 0.00 0.00 0.98
2401 2901 4.021368 CGGAAAGATGACGAGGGGTAATAT 60.021 45.833 0.00 0.00 0.00 1.28
2402 2902 5.184479 CGGAAAGATGACGAGGGGTAATATA 59.816 44.000 0.00 0.00 0.00 0.86
2403 2903 6.625300 CGGAAAGATGACGAGGGGTAATATAG 60.625 46.154 0.00 0.00 0.00 1.31
2404 2904 6.210984 GGAAAGATGACGAGGGGTAATATAGT 59.789 42.308 0.00 0.00 0.00 2.12
2405 2905 7.395489 GGAAAGATGACGAGGGGTAATATAGTA 59.605 40.741 0.00 0.00 0.00 1.82
2406 2906 7.941431 AAGATGACGAGGGGTAATATAGTAG 57.059 40.000 0.00 0.00 0.00 2.57
2407 2907 7.030234 AGATGACGAGGGGTAATATAGTAGT 57.970 40.000 0.00 0.00 0.00 2.73
2408 2908 6.885376 AGATGACGAGGGGTAATATAGTAGTG 59.115 42.308 0.00 0.00 0.00 2.74
2409 2909 4.763793 TGACGAGGGGTAATATAGTAGTGC 59.236 45.833 0.00 0.00 0.00 4.40
2410 2910 4.995536 ACGAGGGGTAATATAGTAGTGCT 58.004 43.478 0.00 0.00 0.00 4.40
2411 2911 6.131972 ACGAGGGGTAATATAGTAGTGCTA 57.868 41.667 0.00 0.00 0.00 3.49
2412 2912 6.729428 ACGAGGGGTAATATAGTAGTGCTAT 58.271 40.000 6.01 6.01 42.63 2.97
2413 2913 6.602406 ACGAGGGGTAATATAGTAGTGCTATG 59.398 42.308 10.70 0.00 40.41 2.23
2414 2914 6.602406 CGAGGGGTAATATAGTAGTGCTATGT 59.398 42.308 10.70 1.44 40.41 2.29
2415 2915 7.122353 CGAGGGGTAATATAGTAGTGCTATGTT 59.878 40.741 13.28 13.28 41.98 2.71
2416 2916 8.135382 AGGGGTAATATAGTAGTGCTATGTTG 57.865 38.462 16.83 0.00 40.30 3.33
2417 2917 7.180408 AGGGGTAATATAGTAGTGCTATGTTGG 59.820 40.741 16.83 0.00 40.30 3.77
2418 2918 7.328737 GGGTAATATAGTAGTGCTATGTTGGG 58.671 42.308 16.83 0.00 40.30 4.12
2419 2919 7.038516 GGGTAATATAGTAGTGCTATGTTGGGT 60.039 40.741 16.83 0.00 40.30 4.51
2420 2920 8.373220 GGTAATATAGTAGTGCTATGTTGGGTT 58.627 37.037 16.83 4.34 40.30 4.11
2421 2921 9.204570 GTAATATAGTAGTGCTATGTTGGGTTG 57.795 37.037 16.83 0.00 40.30 3.77
2422 2922 3.350219 AGTAGTGCTATGTTGGGTTGG 57.650 47.619 0.00 0.00 0.00 3.77
2423 2923 2.026262 AGTAGTGCTATGTTGGGTTGGG 60.026 50.000 0.00 0.00 0.00 4.12
2424 2924 0.039618 AGTGCTATGTTGGGTTGGGG 59.960 55.000 0.00 0.00 0.00 4.96
2425 2925 0.970427 GTGCTATGTTGGGTTGGGGG 60.970 60.000 0.00 0.00 0.00 5.40
2442 2942 3.924114 GGGGGTTGGGAAATTATTTGG 57.076 47.619 0.00 0.00 0.00 3.28
2443 2943 3.455849 GGGGGTTGGGAAATTATTTGGA 58.544 45.455 0.00 0.00 0.00 3.53
2444 2944 3.847184 GGGGGTTGGGAAATTATTTGGAA 59.153 43.478 0.00 0.00 0.00 3.53
2445 2945 4.080582 GGGGGTTGGGAAATTATTTGGAAG 60.081 45.833 0.00 0.00 0.00 3.46
2446 2946 4.534500 GGGGTTGGGAAATTATTTGGAAGT 59.466 41.667 0.00 0.00 0.00 3.01
2447 2947 5.722441 GGGGTTGGGAAATTATTTGGAAGTA 59.278 40.000 0.00 0.00 0.00 2.24
2448 2948 6.213802 GGGGTTGGGAAATTATTTGGAAGTAA 59.786 38.462 0.00 0.00 0.00 2.24
2449 2949 7.256727 GGGGTTGGGAAATTATTTGGAAGTAAA 60.257 37.037 0.00 0.00 0.00 2.01
2450 2950 8.325787 GGGTTGGGAAATTATTTGGAAGTAAAT 58.674 33.333 0.00 0.00 34.78 1.40
2451 2951 9.161629 GGTTGGGAAATTATTTGGAAGTAAATG 57.838 33.333 0.00 0.00 32.79 2.32
2452 2952 9.719355 GTTGGGAAATTATTTGGAAGTAAATGT 57.281 29.630 0.00 0.00 32.79 2.71
2466 2966 9.010029 TGGAAGTAAATGTTTCTAAGAACATCC 57.990 33.333 3.97 2.34 46.53 3.51
2467 2967 9.010029 GGAAGTAAATGTTTCTAAGAACATCCA 57.990 33.333 3.97 0.00 46.53 3.41
2469 2969 9.793259 AAGTAAATGTTTCTAAGAACATCCAGA 57.207 29.630 3.97 0.00 46.53 3.86
2470 2970 9.442047 AGTAAATGTTTCTAAGAACATCCAGAG 57.558 33.333 3.97 0.00 46.53 3.35
2471 2971 7.693969 AAATGTTTCTAAGAACATCCAGAGG 57.306 36.000 3.97 0.00 46.53 3.69
2472 2972 4.579869 TGTTTCTAAGAACATCCAGAGGC 58.420 43.478 0.00 0.00 34.77 4.70
2473 2973 4.287067 TGTTTCTAAGAACATCCAGAGGCT 59.713 41.667 0.00 0.00 34.77 4.58
2474 2974 5.483937 TGTTTCTAAGAACATCCAGAGGCTA 59.516 40.000 0.00 0.00 34.77 3.93
2475 2975 6.156949 TGTTTCTAAGAACATCCAGAGGCTAT 59.843 38.462 0.00 0.00 34.77 2.97
2476 2976 6.814954 TTCTAAGAACATCCAGAGGCTATT 57.185 37.500 0.00 0.00 0.00 1.73
2477 2977 6.814954 TCTAAGAACATCCAGAGGCTATTT 57.185 37.500 0.00 0.00 0.00 1.40
2478 2978 6.586344 TCTAAGAACATCCAGAGGCTATTTG 58.414 40.000 0.00 0.00 0.00 2.32
2479 2979 4.162040 AGAACATCCAGAGGCTATTTGG 57.838 45.455 5.96 5.96 0.00 3.28
2480 2980 3.525199 AGAACATCCAGAGGCTATTTGGT 59.475 43.478 10.78 0.00 33.65 3.67
2481 2981 4.018050 AGAACATCCAGAGGCTATTTGGTT 60.018 41.667 10.78 1.85 33.65 3.67
2482 2982 4.322057 ACATCCAGAGGCTATTTGGTTT 57.678 40.909 10.78 0.44 33.65 3.27
2483 2983 4.019174 ACATCCAGAGGCTATTTGGTTTG 58.981 43.478 10.78 11.52 33.65 2.93
2484 2984 3.085952 TCCAGAGGCTATTTGGTTTGG 57.914 47.619 10.78 0.00 33.65 3.28
2485 2985 2.647299 TCCAGAGGCTATTTGGTTTGGA 59.353 45.455 10.78 0.00 33.65 3.53
2486 2986 3.019564 CCAGAGGCTATTTGGTTTGGAG 58.980 50.000 0.00 0.00 0.00 3.86
2487 2987 2.424956 CAGAGGCTATTTGGTTTGGAGC 59.575 50.000 0.00 0.00 0.00 4.70
2491 2991 3.236632 GCTATTTGGTTTGGAGCCTTG 57.763 47.619 0.00 0.00 0.00 3.61
2492 2992 2.825532 GCTATTTGGTTTGGAGCCTTGA 59.174 45.455 0.00 0.00 0.00 3.02
2493 2993 3.119352 GCTATTTGGTTTGGAGCCTTGAG 60.119 47.826 0.00 0.00 0.00 3.02
2494 2994 1.039856 TTTGGTTTGGAGCCTTGAGC 58.960 50.000 0.00 0.00 44.25 4.26
2504 3004 4.355720 CCTTGAGCTGCCCTGCCA 62.356 66.667 0.00 0.00 0.00 4.92
2505 3005 2.282674 CTTGAGCTGCCCTGCCAA 60.283 61.111 0.00 0.00 0.00 4.52
2506 3006 1.904865 CTTGAGCTGCCCTGCCAAA 60.905 57.895 0.00 0.00 0.00 3.28
2507 3007 1.457267 TTGAGCTGCCCTGCCAAAA 60.457 52.632 0.00 0.00 0.00 2.44
2508 3008 0.832983 TTGAGCTGCCCTGCCAAAAT 60.833 50.000 0.00 0.00 0.00 1.82
2509 3009 0.039472 TGAGCTGCCCTGCCAAAATA 59.961 50.000 0.00 0.00 0.00 1.40
2510 3010 1.342275 TGAGCTGCCCTGCCAAAATAT 60.342 47.619 0.00 0.00 0.00 1.28
2511 3011 1.068127 GAGCTGCCCTGCCAAAATATG 59.932 52.381 0.00 0.00 0.00 1.78
2531 3031 3.859650 GTCGTTGACCAGACTTCGA 57.140 52.632 0.00 0.00 34.74 3.71
2532 3032 1.687628 GTCGTTGACCAGACTTCGAG 58.312 55.000 0.00 0.00 34.74 4.04
2533 3033 0.596577 TCGTTGACCAGACTTCGAGG 59.403 55.000 0.00 0.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.404215 CGAGTTAGCGACCCATAATGG 58.596 52.381 0.00 0.00 37.25 3.16
2 3 1.792949 GCGAGTTAGCGACCCATAATG 59.207 52.381 0.00 0.00 0.00 1.90
3 4 1.687123 AGCGAGTTAGCGACCCATAAT 59.313 47.619 0.00 0.00 43.00 1.28
4 5 1.108776 AGCGAGTTAGCGACCCATAA 58.891 50.000 0.00 0.00 43.00 1.90
6 7 1.141881 CAGCGAGTTAGCGACCCAT 59.858 57.895 0.00 0.00 43.00 4.00
7 8 2.571757 CAGCGAGTTAGCGACCCA 59.428 61.111 0.00 0.00 43.00 4.51
27 28 1.654137 GTTGCCGCTGAAACACACG 60.654 57.895 0.00 0.00 0.00 4.49
114 115 7.828717 CCCCTTTATATTTTGTGCCTGATTTTT 59.171 33.333 0.00 0.00 0.00 1.94
121 122 3.038280 GGCCCCTTTATATTTTGTGCCT 58.962 45.455 0.00 0.00 33.64 4.75
123 124 5.862678 TTAGGCCCCTTTATATTTTGTGC 57.137 39.130 0.00 0.00 0.00 4.57
126 127 8.094548 GGCTTTATTAGGCCCCTTTATATTTTG 58.905 37.037 0.00 0.00 43.40 2.44
141 142 2.561569 CCACCGTCTGGCTTTATTAGG 58.438 52.381 0.00 0.00 39.70 2.69
150 151 2.185310 ATCAACTCCCACCGTCTGGC 62.185 60.000 0.00 0.00 39.01 4.85
153 154 1.296715 GCATCAACTCCCACCGTCT 59.703 57.895 0.00 0.00 0.00 4.18
176 177 7.559486 TCAGTATCACTGCTCAAACTCATTAT 58.441 34.615 1.34 0.00 45.54 1.28
182 183 5.368145 TGTTTCAGTATCACTGCTCAAACT 58.632 37.500 16.49 0.00 45.54 2.66
183 184 5.673337 TGTTTCAGTATCACTGCTCAAAC 57.327 39.130 11.95 11.95 45.54 2.93
184 185 6.347644 CGATTGTTTCAGTATCACTGCTCAAA 60.348 38.462 1.34 0.00 45.54 2.69
185 186 5.120674 CGATTGTTTCAGTATCACTGCTCAA 59.879 40.000 1.34 7.11 45.54 3.02
186 187 4.627035 CGATTGTTTCAGTATCACTGCTCA 59.373 41.667 1.34 0.00 45.54 4.26
187 188 4.864806 TCGATTGTTTCAGTATCACTGCTC 59.135 41.667 1.34 0.00 45.54 4.26
188 189 4.820897 TCGATTGTTTCAGTATCACTGCT 58.179 39.130 1.34 0.00 45.54 4.24
189 190 5.291858 TCATCGATTGTTTCAGTATCACTGC 59.708 40.000 0.00 0.00 45.54 4.40
191 192 6.536582 CCTTCATCGATTGTTTCAGTATCACT 59.463 38.462 0.00 0.00 0.00 3.41
192 193 6.313905 ACCTTCATCGATTGTTTCAGTATCAC 59.686 38.462 0.00 0.00 0.00 3.06
193 194 6.313658 CACCTTCATCGATTGTTTCAGTATCA 59.686 38.462 0.00 0.00 0.00 2.15
194 195 6.535150 TCACCTTCATCGATTGTTTCAGTATC 59.465 38.462 0.00 0.00 0.00 2.24
195 196 6.406370 TCACCTTCATCGATTGTTTCAGTAT 58.594 36.000 0.00 0.00 0.00 2.12
196 197 5.789521 TCACCTTCATCGATTGTTTCAGTA 58.210 37.500 0.00 0.00 0.00 2.74
197 198 4.641396 TCACCTTCATCGATTGTTTCAGT 58.359 39.130 0.00 0.00 0.00 3.41
198 199 5.049474 TGTTCACCTTCATCGATTGTTTCAG 60.049 40.000 0.00 0.00 0.00 3.02
199 200 4.819088 TGTTCACCTTCATCGATTGTTTCA 59.181 37.500 0.00 0.00 0.00 2.69
200 201 5.356882 TGTTCACCTTCATCGATTGTTTC 57.643 39.130 0.00 0.00 0.00 2.78
201 202 5.530915 TCTTGTTCACCTTCATCGATTGTTT 59.469 36.000 0.00 0.00 0.00 2.83
202 203 5.063204 TCTTGTTCACCTTCATCGATTGTT 58.937 37.500 0.00 0.00 0.00 2.83
203 204 4.641396 TCTTGTTCACCTTCATCGATTGT 58.359 39.130 0.00 0.00 0.00 2.71
204 205 4.436584 GCTCTTGTTCACCTTCATCGATTG 60.437 45.833 0.00 0.00 0.00 2.67
214 215 3.243724 AGTAGAAGGCTCTTGTTCACCT 58.756 45.455 0.00 0.00 32.70 4.00
240 241 3.118454 CAACCGGCGCCACACTAG 61.118 66.667 28.98 8.71 0.00 2.57
250 251 0.318699 GAAAGCCTTTCACAACCGGC 60.319 55.000 12.26 0.00 42.79 6.13
271 272 0.602905 CCACTCCCAACAAGTCGTCC 60.603 60.000 0.00 0.00 0.00 4.79
284 285 2.507407 TGTTAAAGATGCCCCACTCC 57.493 50.000 0.00 0.00 0.00 3.85
289 290 2.733956 TGTCCATGTTAAAGATGCCCC 58.266 47.619 0.00 0.00 0.00 5.80
299 315 4.142859 GCGAACGGTTTTATGTCCATGTTA 60.143 41.667 0.00 0.00 0.00 2.41
303 319 2.428491 TGCGAACGGTTTTATGTCCAT 58.572 42.857 0.00 0.00 0.00 3.41
304 320 1.880271 TGCGAACGGTTTTATGTCCA 58.120 45.000 0.00 0.00 0.00 4.02
309 325 6.184580 TCAAACATATGCGAACGGTTTTAT 57.815 33.333 1.58 0.00 29.89 1.40
316 332 2.427169 CGGTTCAAACATATGCGAACG 58.573 47.619 19.14 13.77 38.89 3.95
332 348 2.047274 CATCTGGACACCGCGGTT 60.047 61.111 32.11 20.44 0.00 4.44
349 365 3.971346 ACCGTGATGGATGGCACAAAAC 61.971 50.000 0.00 0.00 42.30 2.43
366 382 1.805254 CGGACCGATACAAGACCGT 59.195 57.895 8.64 0.00 36.38 4.83
375 391 2.011222 GAACCATTTTGCGGACCGATA 58.989 47.619 20.50 1.99 0.00 2.92
385 401 0.591170 AGTGCGTCCGAACCATTTTG 59.409 50.000 0.00 0.00 0.00 2.44
398 414 0.663153 GTTTGCAGGAGAAAGTGCGT 59.337 50.000 0.00 0.00 42.96 5.24
399 415 0.947244 AGTTTGCAGGAGAAAGTGCG 59.053 50.000 0.00 0.00 42.96 5.34
412 428 8.501580 AGGTCTCTACGTTTATTTTTAGTTTGC 58.498 33.333 0.00 0.00 0.00 3.68
428 444 2.490217 CCCGCACAGGTCTCTACG 59.510 66.667 0.00 0.00 38.74 3.51
429 445 1.982938 ACCCCGCACAGGTCTCTAC 60.983 63.158 0.00 0.00 38.74 2.59
430 446 1.982395 CACCCCGCACAGGTCTCTA 60.982 63.158 0.00 0.00 38.74 2.43
431 447 3.314331 CACCCCGCACAGGTCTCT 61.314 66.667 0.00 0.00 38.74 3.10
432 448 3.178540 AACACCCCGCACAGGTCTC 62.179 63.158 0.00 0.00 38.74 3.36
433 449 3.168528 AACACCCCGCACAGGTCT 61.169 61.111 0.00 0.00 38.74 3.85
437 453 3.357079 GAGCAACACCCCGCACAG 61.357 66.667 0.00 0.00 0.00 3.66
439 455 4.947147 TGGAGCAACACCCCGCAC 62.947 66.667 0.00 0.00 0.00 5.34
486 502 6.183360 GGACCTCTAAGATGACTCACTAAAGG 60.183 46.154 0.00 0.00 0.00 3.11
497 513 3.840666 AGCTTTGTGGACCTCTAAGATGA 59.159 43.478 18.13 0.00 0.00 2.92
504 520 0.403271 ATGCAGCTTTGTGGACCTCT 59.597 50.000 0.00 0.00 0.00 3.69
512 528 3.689161 TGAACGCTAATATGCAGCTTTGT 59.311 39.130 6.16 0.00 36.86 2.83
617 634 4.829064 ACTTGACACAAACGCATGTTAT 57.171 36.364 0.00 0.00 37.31 1.89
619 636 3.502191 AACTTGACACAAACGCATGTT 57.498 38.095 0.00 0.00 40.98 2.71
623 640 1.813178 TCCAAACTTGACACAAACGCA 59.187 42.857 0.00 0.00 0.00 5.24
638 655 7.610865 ACTGAAAAGAACAAAACATCTCCAAA 58.389 30.769 0.00 0.00 0.00 3.28
640 657 6.773976 ACTGAAAAGAACAAAACATCTCCA 57.226 33.333 0.00 0.00 0.00 3.86
641 658 8.479313 AAAACTGAAAAGAACAAAACATCTCC 57.521 30.769 0.00 0.00 0.00 3.71
650 667 9.232082 CGAACATGATAAAACTGAAAAGAACAA 57.768 29.630 0.00 0.00 0.00 2.83
667 686 5.470098 GCCACATAATAAGGACGAACATGAT 59.530 40.000 0.00 0.00 0.00 2.45
674 693 3.958147 TCTCAGCCACATAATAAGGACGA 59.042 43.478 0.00 0.00 0.00 4.20
686 705 6.324770 TGTCTCTCATTTATATCTCAGCCACA 59.675 38.462 0.00 0.00 0.00 4.17
700 719 8.701895 TCTTTACCGGTAATATGTCTCTCATTT 58.298 33.333 27.03 0.00 37.91 2.32
708 727 8.937634 TCTCTTTTCTTTACCGGTAATATGTC 57.062 34.615 27.03 0.00 0.00 3.06
710 729 9.595823 TTCTCTCTTTTCTTTACCGGTAATATG 57.404 33.333 27.03 18.96 0.00 1.78
711 730 9.819267 CTTCTCTCTTTTCTTTACCGGTAATAT 57.181 33.333 27.03 0.00 0.00 1.28
723 742 3.403968 GGTTCGGCTTCTCTCTTTTCTT 58.596 45.455 0.00 0.00 0.00 2.52
724 743 2.289756 GGGTTCGGCTTCTCTCTTTTCT 60.290 50.000 0.00 0.00 0.00 2.52
805 828 1.701545 ATTATGCGGGTGTTCGTGCG 61.702 55.000 0.00 0.00 0.00 5.34
806 829 0.027586 GATTATGCGGGTGTTCGTGC 59.972 55.000 0.00 0.00 0.00 5.34
807 830 1.364721 TGATTATGCGGGTGTTCGTG 58.635 50.000 0.00 0.00 0.00 4.35
808 831 2.006888 CTTGATTATGCGGGTGTTCGT 58.993 47.619 0.00 0.00 0.00 3.85
852 921 5.858876 AGAGAGCCTTCTAGATCAGGATA 57.141 43.478 13.76 0.00 32.53 2.59
877 946 5.148502 ACTGAACCTCCAGGACGAATATAT 58.851 41.667 0.00 0.00 38.44 0.86
899 1247 5.788531 GTGATGCGTTTGATTGTTGTACTAC 59.211 40.000 0.05 0.05 0.00 2.73
902 1250 3.597825 CGTGATGCGTTTGATTGTTGTAC 59.402 43.478 0.00 0.00 35.54 2.90
903 1251 3.804688 CGTGATGCGTTTGATTGTTGTA 58.195 40.909 0.00 0.00 35.54 2.41
904 1252 2.649516 CGTGATGCGTTTGATTGTTGT 58.350 42.857 0.00 0.00 35.54 3.32
905 1253 1.383080 GCGTGATGCGTTTGATTGTTG 59.617 47.619 0.00 0.00 43.66 3.33
906 1254 1.685302 GCGTGATGCGTTTGATTGTT 58.315 45.000 0.00 0.00 43.66 2.83
907 1255 3.383026 GCGTGATGCGTTTGATTGT 57.617 47.368 0.00 0.00 43.66 2.71
933 1281 2.287608 GGTTTCCTTTTGCAAGAGGACG 60.288 50.000 32.40 11.11 41.61 4.79
937 1285 2.297315 GGAGGGTTTCCTTTTGCAAGAG 59.703 50.000 9.98 9.98 45.05 2.85
948 1296 1.622312 ACAGAGTAACGGAGGGTTTCC 59.378 52.381 0.00 0.00 43.04 3.13
1020 1368 1.080705 AGAGCGGTTTTCGTCGGAG 60.081 57.895 0.00 0.00 41.72 4.63
1090 1438 0.389166 AAGAAGTCCTTGAGCGAGCG 60.389 55.000 0.00 0.00 32.92 5.03
1151 1502 6.293081 CCTCGAGCATATACATCAACCAAAAG 60.293 42.308 6.99 0.00 0.00 2.27
1164 1515 3.082548 GTCTAGCACCCTCGAGCATATA 58.917 50.000 6.99 0.00 0.00 0.86
1167 1518 0.396417 AGTCTAGCACCCTCGAGCAT 60.396 55.000 6.99 0.00 0.00 3.79
1168 1519 1.000771 AGTCTAGCACCCTCGAGCA 60.001 57.895 6.99 0.00 0.00 4.26
1175 1526 0.539051 AGCATCACAGTCTAGCACCC 59.461 55.000 0.00 0.00 0.00 4.61
1187 1542 1.142474 GCAGGCAACAAAAGCATCAC 58.858 50.000 0.00 0.00 41.41 3.06
1202 1557 1.764723 TGTACAGATCCATCCAGCAGG 59.235 52.381 0.00 0.00 0.00 4.85
1239 1594 5.512232 GGCTGAATCTAATCTGAACCCTAGG 60.512 48.000 0.06 0.06 0.00 3.02
1248 1603 2.502295 GGCCAGGCTGAATCTAATCTG 58.498 52.381 17.94 0.00 0.00 2.90
1311 1669 3.853671 CGTGTTAGGCAGATGCAAATTTC 59.146 43.478 7.19 0.00 44.36 2.17
1312 1670 3.505680 TCGTGTTAGGCAGATGCAAATTT 59.494 39.130 7.19 0.00 44.36 1.82
1542 1900 2.524394 GGGCGGGCAGATCTCCTA 60.524 66.667 3.27 0.00 0.00 2.94
1573 1935 4.801891 TGATAACTTGACACCGACACTAC 58.198 43.478 0.00 0.00 0.00 2.73
1658 2020 5.142635 TCAACAATCATAAGCGAACGATG 57.857 39.130 0.00 0.00 0.00 3.84
1759 2122 6.897966 ACTCTGGGATGTTATCTCTCAACTTA 59.102 38.462 0.00 0.00 0.00 2.24
1799 2162 7.224949 CCGAATAGAAGAAAAACTCTGGGATAC 59.775 40.741 0.00 0.00 33.37 2.24
1800 2163 7.125204 TCCGAATAGAAGAAAAACTCTGGGATA 59.875 37.037 0.00 0.00 33.37 2.59
1855 2295 1.334149 GGCTCAGTGCGTCTTGTTTTC 60.334 52.381 0.00 0.00 44.05 2.29
1905 2348 1.701704 GCCGGATGCTGTTCAAAAAG 58.298 50.000 5.05 0.00 36.87 2.27
1906 2349 3.883997 GCCGGATGCTGTTCAAAAA 57.116 47.368 5.05 0.00 36.87 1.94
1942 2385 2.409870 CCCCGGATGTGAAAGCAGC 61.410 63.158 0.73 0.00 0.00 5.25
1943 2386 1.002134 ACCCCGGATGTGAAAGCAG 60.002 57.895 0.73 0.00 0.00 4.24
1944 2387 1.303236 CACCCCGGATGTGAAAGCA 60.303 57.895 16.45 0.00 35.74 3.91
1945 2388 2.700773 GCACCCCGGATGTGAAAGC 61.701 63.158 23.26 7.98 35.74 3.51
1946 2389 2.046285 GGCACCCCGGATGTGAAAG 61.046 63.158 23.26 2.38 35.74 2.62
1947 2390 2.034999 GGCACCCCGGATGTGAAA 59.965 61.111 23.26 0.00 35.74 2.69
2031 2478 4.675029 AAGGTTCGGTGGCGGTCG 62.675 66.667 0.00 0.00 0.00 4.79
2047 2546 0.299300 CGTTGCGAACAGTCACGAAA 59.701 50.000 0.00 0.00 0.00 3.46
2082 2582 1.273606 TCTGCCGTGGAGAAAGAGAAG 59.726 52.381 0.00 0.00 0.00 2.85
2128 2628 6.325028 TGGGGAATCATCTAGTCAAGAGTAAG 59.675 42.308 0.00 0.00 37.74 2.34
2129 2629 6.202331 TGGGGAATCATCTAGTCAAGAGTAA 58.798 40.000 0.00 0.00 37.74 2.24
2130 2630 5.777449 TGGGGAATCATCTAGTCAAGAGTA 58.223 41.667 0.00 0.00 37.74 2.59
2131 2631 4.624913 TGGGGAATCATCTAGTCAAGAGT 58.375 43.478 0.00 0.00 37.74 3.24
2132 2632 4.040217 CCTGGGGAATCATCTAGTCAAGAG 59.960 50.000 0.00 0.00 37.74 2.85
2133 2633 3.969976 CCTGGGGAATCATCTAGTCAAGA 59.030 47.826 0.00 0.00 39.02 3.02
2134 2634 3.969976 TCCTGGGGAATCATCTAGTCAAG 59.030 47.826 0.00 0.00 0.00 3.02
2135 2635 3.969976 CTCCTGGGGAATCATCTAGTCAA 59.030 47.826 0.00 0.00 0.00 3.18
2136 2636 3.051803 ACTCCTGGGGAATCATCTAGTCA 60.052 47.826 0.00 0.00 0.00 3.41
2137 2637 3.582164 ACTCCTGGGGAATCATCTAGTC 58.418 50.000 0.00 0.00 0.00 2.59
2138 2638 3.715648 ACTCCTGGGGAATCATCTAGT 57.284 47.619 0.00 0.00 0.00 2.57
2139 2639 4.040217 CAGAACTCCTGGGGAATCATCTAG 59.960 50.000 0.00 0.00 39.23 2.43
2140 2640 3.969976 CAGAACTCCTGGGGAATCATCTA 59.030 47.826 0.00 0.00 39.23 1.98
2141 2641 2.776536 CAGAACTCCTGGGGAATCATCT 59.223 50.000 0.00 0.00 39.23 2.90
2142 2642 3.205784 CAGAACTCCTGGGGAATCATC 57.794 52.381 0.00 0.00 39.23 2.92
2169 2669 9.487790 CCTCCACATTCTAAATTTTAGCAAAAA 57.512 29.630 10.71 1.86 38.87 1.94
2170 2670 8.865090 TCCTCCACATTCTAAATTTTAGCAAAA 58.135 29.630 10.71 2.17 34.41 2.44
2171 2671 8.415950 TCCTCCACATTCTAAATTTTAGCAAA 57.584 30.769 10.71 2.79 0.00 3.68
2172 2672 8.415950 TTCCTCCACATTCTAAATTTTAGCAA 57.584 30.769 10.71 7.20 0.00 3.91
2173 2673 8.593945 ATTCCTCCACATTCTAAATTTTAGCA 57.406 30.769 10.71 1.47 0.00 3.49
2174 2674 9.952188 GTATTCCTCCACATTCTAAATTTTAGC 57.048 33.333 10.71 0.00 0.00 3.09
2177 2677 9.533831 AGTGTATTCCTCCACATTCTAAATTTT 57.466 29.630 0.00 0.00 33.99 1.82
2178 2678 8.960591 CAGTGTATTCCTCCACATTCTAAATTT 58.039 33.333 0.00 0.00 33.99 1.82
2179 2679 8.109634 ACAGTGTATTCCTCCACATTCTAAATT 58.890 33.333 0.00 0.00 33.99 1.82
2180 2680 7.554118 CACAGTGTATTCCTCCACATTCTAAAT 59.446 37.037 0.00 0.00 33.99 1.40
2181 2681 6.878923 CACAGTGTATTCCTCCACATTCTAAA 59.121 38.462 0.00 0.00 33.99 1.85
2182 2682 6.013725 ACACAGTGTATTCCTCCACATTCTAA 60.014 38.462 3.69 0.00 33.99 2.10
2183 2683 5.483937 ACACAGTGTATTCCTCCACATTCTA 59.516 40.000 3.69 0.00 33.99 2.10
2184 2684 4.287067 ACACAGTGTATTCCTCCACATTCT 59.713 41.667 3.69 0.00 33.99 2.40
2185 2685 4.579869 ACACAGTGTATTCCTCCACATTC 58.420 43.478 3.69 0.00 33.99 2.67
2186 2686 4.640771 ACACAGTGTATTCCTCCACATT 57.359 40.909 3.69 0.00 33.99 2.71
2187 2687 5.755409 TTACACAGTGTATTCCTCCACAT 57.245 39.130 14.34 0.00 32.20 3.21
2188 2688 5.305902 TCTTTACACAGTGTATTCCTCCACA 59.694 40.000 14.34 0.00 32.20 4.17
2189 2689 5.790593 TCTTTACACAGTGTATTCCTCCAC 58.209 41.667 14.34 0.00 32.20 4.02
2190 2690 6.428083 TTCTTTACACAGTGTATTCCTCCA 57.572 37.500 14.34 0.00 32.20 3.86
2191 2691 7.739498 TTTTCTTTACACAGTGTATTCCTCC 57.261 36.000 14.34 0.00 32.20 4.30
2199 2699 8.129211 GCAAGTCTATTTTTCTTTACACAGTGT 58.871 33.333 11.87 11.87 0.00 3.55
2200 2700 8.345565 AGCAAGTCTATTTTTCTTTACACAGTG 58.654 33.333 0.00 0.00 0.00 3.66
2201 2701 8.451908 AGCAAGTCTATTTTTCTTTACACAGT 57.548 30.769 0.00 0.00 0.00 3.55
2202 2702 9.173939 CAAGCAAGTCTATTTTTCTTTACACAG 57.826 33.333 0.00 0.00 0.00 3.66
2203 2703 8.682710 ACAAGCAAGTCTATTTTTCTTTACACA 58.317 29.630 0.00 0.00 0.00 3.72
2204 2704 8.958043 CACAAGCAAGTCTATTTTTCTTTACAC 58.042 33.333 0.00 0.00 0.00 2.90
2205 2705 8.682710 ACACAAGCAAGTCTATTTTTCTTTACA 58.317 29.630 0.00 0.00 0.00 2.41
2206 2706 8.958043 CACACAAGCAAGTCTATTTTTCTTTAC 58.042 33.333 0.00 0.00 0.00 2.01
2207 2707 8.682710 ACACACAAGCAAGTCTATTTTTCTTTA 58.317 29.630 0.00 0.00 0.00 1.85
2208 2708 7.547227 ACACACAAGCAAGTCTATTTTTCTTT 58.453 30.769 0.00 0.00 0.00 2.52
2209 2709 7.100458 ACACACAAGCAAGTCTATTTTTCTT 57.900 32.000 0.00 0.00 0.00 2.52
2210 2710 6.318648 TGACACACAAGCAAGTCTATTTTTCT 59.681 34.615 0.00 0.00 32.41 2.52
2211 2711 6.494842 TGACACACAAGCAAGTCTATTTTTC 58.505 36.000 0.00 0.00 32.41 2.29
2212 2712 6.449635 TGACACACAAGCAAGTCTATTTTT 57.550 33.333 0.00 0.00 32.41 1.94
2213 2713 6.449635 TTGACACACAAGCAAGTCTATTTT 57.550 33.333 0.00 0.00 34.20 1.82
2214 2714 6.449635 TTTGACACACAAGCAAGTCTATTT 57.550 33.333 0.00 0.00 39.77 1.40
2215 2715 6.095440 ACTTTTGACACACAAGCAAGTCTATT 59.905 34.615 0.00 0.00 35.79 1.73
2216 2716 5.590259 ACTTTTGACACACAAGCAAGTCTAT 59.410 36.000 0.00 0.00 35.79 1.98
2217 2717 4.941263 ACTTTTGACACACAAGCAAGTCTA 59.059 37.500 0.00 0.00 35.79 2.59
2218 2718 3.758554 ACTTTTGACACACAAGCAAGTCT 59.241 39.130 0.00 0.00 35.79 3.24
2219 2719 4.096732 ACTTTTGACACACAAGCAAGTC 57.903 40.909 0.00 0.00 35.79 3.01
2220 2720 4.022416 TGAACTTTTGACACACAAGCAAGT 60.022 37.500 0.00 0.00 39.64 3.16
2221 2721 4.484236 TGAACTTTTGACACACAAGCAAG 58.516 39.130 0.00 0.00 39.77 4.01
2222 2722 4.511617 TGAACTTTTGACACACAAGCAA 57.488 36.364 0.00 0.00 39.77 3.91
2223 2723 4.511617 TTGAACTTTTGACACACAAGCA 57.488 36.364 0.00 0.00 39.77 3.91
2224 2724 5.176590 TGTTTTGAACTTTTGACACACAAGC 59.823 36.000 0.00 0.00 39.77 4.01
2225 2725 6.761731 TGTTTTGAACTTTTGACACACAAG 57.238 33.333 0.00 0.00 39.77 3.16
2226 2726 7.721286 AATGTTTTGAACTTTTGACACACAA 57.279 28.000 0.00 0.00 36.65 3.33
2227 2727 7.095439 GGAAATGTTTTGAACTTTTGACACACA 60.095 33.333 8.74 0.00 38.42 3.72
2228 2728 7.233689 GGAAATGTTTTGAACTTTTGACACAC 58.766 34.615 8.74 0.00 38.42 3.82
2229 2729 6.370166 GGGAAATGTTTTGAACTTTTGACACA 59.630 34.615 8.74 0.00 38.42 3.72
2230 2730 6.593770 AGGGAAATGTTTTGAACTTTTGACAC 59.406 34.615 8.74 0.00 38.42 3.67
2231 2731 6.706295 AGGGAAATGTTTTGAACTTTTGACA 58.294 32.000 8.74 0.00 38.42 3.58
2232 2732 7.609760 AAGGGAAATGTTTTGAACTTTTGAC 57.390 32.000 8.74 3.60 38.42 3.18
2233 2733 7.064016 CGAAAGGGAAATGTTTTGAACTTTTGA 59.936 33.333 8.74 0.00 38.42 2.69
2234 2734 7.148490 ACGAAAGGGAAATGTTTTGAACTTTTG 60.148 33.333 8.74 0.00 38.42 2.44
2235 2735 6.876789 ACGAAAGGGAAATGTTTTGAACTTTT 59.123 30.769 0.00 4.88 40.23 2.27
2236 2736 6.312672 CACGAAAGGGAAATGTTTTGAACTTT 59.687 34.615 0.00 0.00 35.60 2.66
2237 2737 5.810074 CACGAAAGGGAAATGTTTTGAACTT 59.190 36.000 0.00 0.00 35.60 2.66
2238 2738 5.105513 ACACGAAAGGGAAATGTTTTGAACT 60.106 36.000 0.00 0.00 38.45 3.01
2239 2739 5.005299 CACACGAAAGGGAAATGTTTTGAAC 59.995 40.000 0.00 0.00 38.45 3.18
2240 2740 5.105752 CACACGAAAGGGAAATGTTTTGAA 58.894 37.500 0.00 0.00 38.45 2.69
2241 2741 4.440802 CCACACGAAAGGGAAATGTTTTGA 60.441 41.667 0.00 0.00 38.45 2.69
2242 2742 3.801594 CCACACGAAAGGGAAATGTTTTG 59.198 43.478 0.00 0.00 38.45 2.44
2243 2743 3.702045 TCCACACGAAAGGGAAATGTTTT 59.298 39.130 0.00 0.00 38.45 2.43
2244 2744 3.292460 TCCACACGAAAGGGAAATGTTT 58.708 40.909 0.00 0.00 38.45 2.83
2245 2745 2.938838 TCCACACGAAAGGGAAATGTT 58.061 42.857 0.00 0.00 38.45 2.71
2246 2746 2.649531 TCCACACGAAAGGGAAATGT 57.350 45.000 0.00 0.00 38.45 2.71
2247 2747 4.048504 GTTTTCCACACGAAAGGGAAATG 58.951 43.478 13.16 0.00 46.71 2.32
2248 2748 3.702045 TGTTTTCCACACGAAAGGGAAAT 59.298 39.130 13.16 0.00 46.71 2.17
2249 2749 3.090037 TGTTTTCCACACGAAAGGGAAA 58.910 40.909 9.91 9.91 46.07 3.13
2250 2750 2.724454 TGTTTTCCACACGAAAGGGAA 58.276 42.857 0.00 0.00 41.47 3.97
2251 2751 2.421751 TGTTTTCCACACGAAAGGGA 57.578 45.000 0.00 0.00 41.47 4.20
2252 2752 4.700213 AGATATGTTTTCCACACGAAAGGG 59.300 41.667 0.00 0.00 41.47 3.95
2253 2753 5.880054 AGATATGTTTTCCACACGAAAGG 57.120 39.130 0.00 0.00 41.47 3.11
2254 2754 6.149474 AGGAAGATATGTTTTCCACACGAAAG 59.851 38.462 13.29 0.00 44.26 2.62
2255 2755 6.001460 AGGAAGATATGTTTTCCACACGAAA 58.999 36.000 13.29 0.00 44.26 3.46
2256 2756 5.556915 AGGAAGATATGTTTTCCACACGAA 58.443 37.500 13.29 0.00 44.26 3.85
2257 2757 5.160607 AGGAAGATATGTTTTCCACACGA 57.839 39.130 13.29 0.00 44.26 4.35
2258 2758 6.978343 TTAGGAAGATATGTTTTCCACACG 57.022 37.500 13.29 0.00 44.26 4.49
2259 2759 8.281212 ACATTAGGAAGATATGTTTTCCACAC 57.719 34.615 13.29 0.00 44.26 3.82
2260 2760 8.106462 TGACATTAGGAAGATATGTTTTCCACA 58.894 33.333 13.29 0.97 44.26 4.17
2261 2761 8.506168 TGACATTAGGAAGATATGTTTTCCAC 57.494 34.615 13.29 0.53 44.26 4.02
2270 2770 9.851686 TGCTTTTGTATGACATTAGGAAGATAT 57.148 29.630 0.00 0.00 0.00 1.63
2271 2771 9.851686 ATGCTTTTGTATGACATTAGGAAGATA 57.148 29.630 0.00 0.00 0.00 1.98
2272 2772 8.757982 ATGCTTTTGTATGACATTAGGAAGAT 57.242 30.769 0.00 0.00 0.00 2.40
2273 2773 7.283127 GGATGCTTTTGTATGACATTAGGAAGA 59.717 37.037 0.00 0.00 0.00 2.87
2274 2774 7.067372 TGGATGCTTTTGTATGACATTAGGAAG 59.933 37.037 0.00 0.00 0.00 3.46
2275 2775 6.889177 TGGATGCTTTTGTATGACATTAGGAA 59.111 34.615 0.00 0.00 0.00 3.36
2276 2776 6.422333 TGGATGCTTTTGTATGACATTAGGA 58.578 36.000 0.00 0.00 0.00 2.94
2277 2777 6.543465 TCTGGATGCTTTTGTATGACATTAGG 59.457 38.462 0.00 0.00 0.00 2.69
2278 2778 7.558161 TCTGGATGCTTTTGTATGACATTAG 57.442 36.000 0.00 0.00 0.00 1.73
2279 2779 7.611467 ACTTCTGGATGCTTTTGTATGACATTA 59.389 33.333 0.00 0.00 0.00 1.90
2280 2780 6.435277 ACTTCTGGATGCTTTTGTATGACATT 59.565 34.615 0.00 0.00 0.00 2.71
2281 2781 5.948162 ACTTCTGGATGCTTTTGTATGACAT 59.052 36.000 0.00 0.00 0.00 3.06
2282 2782 5.316167 ACTTCTGGATGCTTTTGTATGACA 58.684 37.500 0.00 0.00 0.00 3.58
2283 2783 5.886960 ACTTCTGGATGCTTTTGTATGAC 57.113 39.130 0.00 0.00 0.00 3.06
2284 2784 6.939730 TGTTACTTCTGGATGCTTTTGTATGA 59.060 34.615 0.00 0.00 0.00 2.15
2285 2785 7.094634 ACTGTTACTTCTGGATGCTTTTGTATG 60.095 37.037 0.00 0.00 0.00 2.39
2286 2786 6.942576 ACTGTTACTTCTGGATGCTTTTGTAT 59.057 34.615 0.00 0.00 0.00 2.29
2287 2787 6.296026 ACTGTTACTTCTGGATGCTTTTGTA 58.704 36.000 0.00 0.00 0.00 2.41
2288 2788 5.133221 ACTGTTACTTCTGGATGCTTTTGT 58.867 37.500 0.00 0.00 0.00 2.83
2289 2789 5.695851 ACTGTTACTTCTGGATGCTTTTG 57.304 39.130 0.00 0.00 0.00 2.44
2290 2790 5.594317 ACAACTGTTACTTCTGGATGCTTTT 59.406 36.000 0.00 0.00 0.00 2.27
2291 2791 5.009010 CACAACTGTTACTTCTGGATGCTTT 59.991 40.000 0.00 0.00 0.00 3.51
2292 2792 4.516698 CACAACTGTTACTTCTGGATGCTT 59.483 41.667 0.00 0.00 0.00 3.91
2293 2793 4.067896 CACAACTGTTACTTCTGGATGCT 58.932 43.478 0.00 0.00 0.00 3.79
2294 2794 3.815401 ACACAACTGTTACTTCTGGATGC 59.185 43.478 0.00 0.00 0.00 3.91
2295 2795 7.672983 ATAACACAACTGTTACTTCTGGATG 57.327 36.000 0.00 0.00 44.03 3.51
2296 2796 9.383519 CATATAACACAACTGTTACTTCTGGAT 57.616 33.333 0.00 0.00 44.03 3.41
2297 2797 7.333423 GCATATAACACAACTGTTACTTCTGGA 59.667 37.037 0.00 0.00 44.03 3.86
2298 2798 7.334421 AGCATATAACACAACTGTTACTTCTGG 59.666 37.037 0.00 0.00 44.03 3.86
2299 2799 8.256611 AGCATATAACACAACTGTTACTTCTG 57.743 34.615 0.00 0.00 44.03 3.02
2317 2817 8.414003 CGCAGGGAACTAAGATAATAGCATATA 58.586 37.037 0.00 0.00 40.21 0.86
2318 2818 7.268586 CGCAGGGAACTAAGATAATAGCATAT 58.731 38.462 0.00 0.00 40.21 1.78
2319 2819 6.631016 CGCAGGGAACTAAGATAATAGCATA 58.369 40.000 0.00 0.00 40.21 3.14
2320 2820 5.482908 CGCAGGGAACTAAGATAATAGCAT 58.517 41.667 0.00 0.00 40.21 3.79
2321 2821 4.799586 GCGCAGGGAACTAAGATAATAGCA 60.800 45.833 0.30 0.00 40.21 3.49
2322 2822 3.680458 GCGCAGGGAACTAAGATAATAGC 59.320 47.826 0.30 0.00 40.21 2.97
2323 2823 4.926238 CAGCGCAGGGAACTAAGATAATAG 59.074 45.833 11.47 0.00 40.21 1.73
2324 2824 4.799586 GCAGCGCAGGGAACTAAGATAATA 60.800 45.833 11.47 0.00 40.21 0.98
2325 2825 3.733337 CAGCGCAGGGAACTAAGATAAT 58.267 45.455 11.47 0.00 40.21 1.28
2326 2826 2.741878 GCAGCGCAGGGAACTAAGATAA 60.742 50.000 11.47 0.00 40.21 1.75
2327 2827 1.202533 GCAGCGCAGGGAACTAAGATA 60.203 52.381 11.47 0.00 40.21 1.98
2328 2828 0.462759 GCAGCGCAGGGAACTAAGAT 60.463 55.000 11.47 0.00 40.21 2.40
2329 2829 1.079127 GCAGCGCAGGGAACTAAGA 60.079 57.895 11.47 0.00 40.21 2.10
2330 2830 2.456119 CGCAGCGCAGGGAACTAAG 61.456 63.158 11.47 0.00 40.21 2.18
2331 2831 2.434185 CGCAGCGCAGGGAACTAA 60.434 61.111 11.47 0.00 40.21 2.24
2344 2844 8.895932 AAAATAAGAATAGTTGTTTAGCGCAG 57.104 30.769 11.47 0.00 0.00 5.18
2361 2861 9.547753 CATCTTTCCGATCCTCTAAAAATAAGA 57.452 33.333 0.00 0.00 0.00 2.10
2362 2862 9.547753 TCATCTTTCCGATCCTCTAAAAATAAG 57.452 33.333 0.00 0.00 0.00 1.73
2363 2863 9.326413 GTCATCTTTCCGATCCTCTAAAAATAA 57.674 33.333 0.00 0.00 0.00 1.40
2364 2864 7.652105 CGTCATCTTTCCGATCCTCTAAAAATA 59.348 37.037 0.00 0.00 0.00 1.40
2365 2865 6.480320 CGTCATCTTTCCGATCCTCTAAAAAT 59.520 38.462 0.00 0.00 0.00 1.82
2366 2866 5.810587 CGTCATCTTTCCGATCCTCTAAAAA 59.189 40.000 0.00 0.00 0.00 1.94
2367 2867 5.126545 TCGTCATCTTTCCGATCCTCTAAAA 59.873 40.000 0.00 0.00 0.00 1.52
2368 2868 4.643334 TCGTCATCTTTCCGATCCTCTAAA 59.357 41.667 0.00 0.00 0.00 1.85
2369 2869 4.204799 TCGTCATCTTTCCGATCCTCTAA 58.795 43.478 0.00 0.00 0.00 2.10
2370 2870 3.815962 CTCGTCATCTTTCCGATCCTCTA 59.184 47.826 0.00 0.00 0.00 2.43
2371 2871 2.621055 CTCGTCATCTTTCCGATCCTCT 59.379 50.000 0.00 0.00 0.00 3.69
2372 2872 2.287909 CCTCGTCATCTTTCCGATCCTC 60.288 54.545 0.00 0.00 0.00 3.71
2373 2873 1.683917 CCTCGTCATCTTTCCGATCCT 59.316 52.381 0.00 0.00 0.00 3.24
2374 2874 1.269831 CCCTCGTCATCTTTCCGATCC 60.270 57.143 0.00 0.00 0.00 3.36
2375 2875 1.269831 CCCCTCGTCATCTTTCCGATC 60.270 57.143 0.00 0.00 0.00 3.69
2376 2876 0.753262 CCCCTCGTCATCTTTCCGAT 59.247 55.000 0.00 0.00 0.00 4.18
2377 2877 0.613853 ACCCCTCGTCATCTTTCCGA 60.614 55.000 0.00 0.00 0.00 4.55
2378 2878 1.108776 TACCCCTCGTCATCTTTCCG 58.891 55.000 0.00 0.00 0.00 4.30
2379 2879 3.840124 ATTACCCCTCGTCATCTTTCC 57.160 47.619 0.00 0.00 0.00 3.13
2380 2880 7.229581 ACTATATTACCCCTCGTCATCTTTC 57.770 40.000 0.00 0.00 0.00 2.62
2381 2881 7.949006 ACTACTATATTACCCCTCGTCATCTTT 59.051 37.037 0.00 0.00 0.00 2.52
2382 2882 7.393796 CACTACTATATTACCCCTCGTCATCTT 59.606 40.741 0.00 0.00 0.00 2.40
2383 2883 6.885376 CACTACTATATTACCCCTCGTCATCT 59.115 42.308 0.00 0.00 0.00 2.90
2384 2884 6.404513 GCACTACTATATTACCCCTCGTCATC 60.405 46.154 0.00 0.00 0.00 2.92
2385 2885 5.418209 GCACTACTATATTACCCCTCGTCAT 59.582 44.000 0.00 0.00 0.00 3.06
2386 2886 4.763793 GCACTACTATATTACCCCTCGTCA 59.236 45.833 0.00 0.00 0.00 4.35
2387 2887 5.008980 AGCACTACTATATTACCCCTCGTC 58.991 45.833 0.00 0.00 0.00 4.20
2388 2888 4.995536 AGCACTACTATATTACCCCTCGT 58.004 43.478 0.00 0.00 0.00 4.18
2389 2889 6.602406 ACATAGCACTACTATATTACCCCTCG 59.398 42.308 0.00 0.00 39.71 4.63
2390 2890 7.957992 ACATAGCACTACTATATTACCCCTC 57.042 40.000 0.00 0.00 39.71 4.30
2391 2891 7.180408 CCAACATAGCACTACTATATTACCCCT 59.820 40.741 0.00 0.00 39.71 4.79
2392 2892 7.328737 CCAACATAGCACTACTATATTACCCC 58.671 42.308 0.00 0.00 39.71 4.95
2393 2893 7.038516 ACCCAACATAGCACTACTATATTACCC 60.039 40.741 0.00 0.00 39.71 3.69
2394 2894 7.904205 ACCCAACATAGCACTACTATATTACC 58.096 38.462 0.00 0.00 39.71 2.85
2395 2895 9.204570 CAACCCAACATAGCACTACTATATTAC 57.795 37.037 0.00 0.00 39.71 1.89
2396 2896 8.372459 CCAACCCAACATAGCACTACTATATTA 58.628 37.037 0.00 0.00 39.71 0.98
2397 2897 7.224297 CCAACCCAACATAGCACTACTATATT 58.776 38.462 0.00 0.00 39.71 1.28
2398 2898 6.239887 CCCAACCCAACATAGCACTACTATAT 60.240 42.308 0.00 0.00 39.71 0.86
2399 2899 5.071250 CCCAACCCAACATAGCACTACTATA 59.929 44.000 0.00 0.00 39.71 1.31
2400 2900 4.141482 CCCAACCCAACATAGCACTACTAT 60.141 45.833 0.00 0.00 42.62 2.12
2401 2901 3.199071 CCCAACCCAACATAGCACTACTA 59.801 47.826 0.00 0.00 34.64 1.82
2402 2902 2.026262 CCCAACCCAACATAGCACTACT 60.026 50.000 0.00 0.00 0.00 2.57
2403 2903 2.365582 CCCAACCCAACATAGCACTAC 58.634 52.381 0.00 0.00 0.00 2.73
2404 2904 1.283613 CCCCAACCCAACATAGCACTA 59.716 52.381 0.00 0.00 0.00 2.74
2405 2905 0.039618 CCCCAACCCAACATAGCACT 59.960 55.000 0.00 0.00 0.00 4.40
2406 2906 0.970427 CCCCCAACCCAACATAGCAC 60.970 60.000 0.00 0.00 0.00 4.40
2407 2907 1.386155 CCCCCAACCCAACATAGCA 59.614 57.895 0.00 0.00 0.00 3.49
2408 2908 4.355151 CCCCCAACCCAACATAGC 57.645 61.111 0.00 0.00 0.00 2.97
2422 2922 3.455849 TCCAAATAATTTCCCAACCCCC 58.544 45.455 0.00 0.00 0.00 5.40
2423 2923 4.534500 ACTTCCAAATAATTTCCCAACCCC 59.466 41.667 0.00 0.00 0.00 4.95
2424 2924 5.755409 ACTTCCAAATAATTTCCCAACCC 57.245 39.130 0.00 0.00 0.00 4.11
2425 2925 9.161629 CATTTACTTCCAAATAATTTCCCAACC 57.838 33.333 0.00 0.00 0.00 3.77
2426 2926 9.719355 ACATTTACTTCCAAATAATTTCCCAAC 57.281 29.630 0.00 0.00 0.00 3.77
2440 2940 9.010029 GGATGTTCTTAGAAACATTTACTTCCA 57.990 33.333 0.00 0.00 46.99 3.53
2441 2941 9.010029 TGGATGTTCTTAGAAACATTTACTTCC 57.990 33.333 0.00 1.63 46.99 3.46
2443 2943 9.793259 TCTGGATGTTCTTAGAAACATTTACTT 57.207 29.630 0.00 0.00 46.99 2.24
2444 2944 9.442047 CTCTGGATGTTCTTAGAAACATTTACT 57.558 33.333 0.00 0.00 46.99 2.24
2445 2945 8.669243 CCTCTGGATGTTCTTAGAAACATTTAC 58.331 37.037 0.00 0.43 46.99 2.01
2446 2946 7.336931 GCCTCTGGATGTTCTTAGAAACATTTA 59.663 37.037 0.00 0.00 46.99 1.40
2447 2947 6.151817 GCCTCTGGATGTTCTTAGAAACATTT 59.848 38.462 0.00 0.00 46.99 2.32
2448 2948 5.649831 GCCTCTGGATGTTCTTAGAAACATT 59.350 40.000 0.00 0.00 46.99 2.71
2450 2950 4.287067 AGCCTCTGGATGTTCTTAGAAACA 59.713 41.667 0.00 0.00 42.92 2.83
2451 2951 4.837972 AGCCTCTGGATGTTCTTAGAAAC 58.162 43.478 0.00 0.00 0.00 2.78
2452 2952 6.814954 ATAGCCTCTGGATGTTCTTAGAAA 57.185 37.500 0.00 0.00 0.00 2.52
2453 2953 6.814954 AATAGCCTCTGGATGTTCTTAGAA 57.185 37.500 0.00 0.00 0.00 2.10
2454 2954 6.408548 CCAAATAGCCTCTGGATGTTCTTAGA 60.409 42.308 0.00 0.00 31.38 2.10
2455 2955 5.762218 CCAAATAGCCTCTGGATGTTCTTAG 59.238 44.000 0.00 0.00 31.38 2.18
2456 2956 5.191722 ACCAAATAGCCTCTGGATGTTCTTA 59.808 40.000 0.00 0.00 34.16 2.10
2457 2957 4.018050 ACCAAATAGCCTCTGGATGTTCTT 60.018 41.667 0.00 0.00 34.16 2.52
2458 2958 3.525199 ACCAAATAGCCTCTGGATGTTCT 59.475 43.478 0.00 0.00 34.16 3.01
2459 2959 3.891049 ACCAAATAGCCTCTGGATGTTC 58.109 45.455 0.00 0.00 34.16 3.18
2460 2960 4.322057 AACCAAATAGCCTCTGGATGTT 57.678 40.909 0.00 0.00 34.16 2.71
2461 2961 4.019174 CAAACCAAATAGCCTCTGGATGT 58.981 43.478 0.00 0.00 34.16 3.06
2462 2962 3.382546 CCAAACCAAATAGCCTCTGGATG 59.617 47.826 0.00 0.00 34.16 3.51
2463 2963 3.269381 TCCAAACCAAATAGCCTCTGGAT 59.731 43.478 0.00 0.00 34.16 3.41
2464 2964 2.647299 TCCAAACCAAATAGCCTCTGGA 59.353 45.455 0.00 0.00 34.16 3.86
2465 2965 3.019564 CTCCAAACCAAATAGCCTCTGG 58.980 50.000 0.00 0.00 36.24 3.86
2466 2966 2.424956 GCTCCAAACCAAATAGCCTCTG 59.575 50.000 0.00 0.00 0.00 3.35
2467 2967 2.728007 GCTCCAAACCAAATAGCCTCT 58.272 47.619 0.00 0.00 0.00 3.69
2471 2971 2.825532 TCAAGGCTCCAAACCAAATAGC 59.174 45.455 0.00 0.00 0.00 2.97
2472 2972 3.119352 GCTCAAGGCTCCAAACCAAATAG 60.119 47.826 0.00 0.00 38.06 1.73
2473 2973 2.825532 GCTCAAGGCTCCAAACCAAATA 59.174 45.455 0.00 0.00 38.06 1.40
2474 2974 1.620323 GCTCAAGGCTCCAAACCAAAT 59.380 47.619 0.00 0.00 38.06 2.32
2475 2975 1.039856 GCTCAAGGCTCCAAACCAAA 58.960 50.000 0.00 0.00 38.06 3.28
2476 2976 2.732289 GCTCAAGGCTCCAAACCAA 58.268 52.632 0.00 0.00 38.06 3.67
2477 2977 4.500265 GCTCAAGGCTCCAAACCA 57.500 55.556 0.00 0.00 38.06 3.67
2487 2987 3.873679 TTGGCAGGGCAGCTCAAGG 62.874 63.158 0.00 0.00 34.17 3.61
2488 2988 1.466025 TTTTGGCAGGGCAGCTCAAG 61.466 55.000 0.00 0.00 34.17 3.02
2489 2989 0.832983 ATTTTGGCAGGGCAGCTCAA 60.833 50.000 0.00 2.05 34.17 3.02
2490 2990 0.039472 TATTTTGGCAGGGCAGCTCA 59.961 50.000 0.00 0.00 34.17 4.26
2491 2991 1.068127 CATATTTTGGCAGGGCAGCTC 59.932 52.381 0.00 0.00 34.17 4.09
2492 2992 1.117150 CATATTTTGGCAGGGCAGCT 58.883 50.000 0.00 0.00 34.17 4.24
2493 2993 0.105408 CCATATTTTGGCAGGGCAGC 59.895 55.000 0.00 0.00 39.09 5.25
2494 2994 0.754472 CCCATATTTTGGCAGGGCAG 59.246 55.000 0.00 0.00 44.97 4.85
2495 2995 0.042431 ACCCATATTTTGGCAGGGCA 59.958 50.000 7.13 0.00 44.97 5.36
2496 2996 0.752658 GACCCATATTTTGGCAGGGC 59.247 55.000 7.13 0.00 44.97 5.19
2497 2997 1.032014 CGACCCATATTTTGGCAGGG 58.968 55.000 5.74 5.74 44.97 4.45
2498 2998 1.762708 ACGACCCATATTTTGGCAGG 58.237 50.000 0.00 0.00 44.97 4.85
2499 2999 2.752354 TCAACGACCCATATTTTGGCAG 59.248 45.455 0.00 0.00 44.97 4.85
2500 3000 2.490115 GTCAACGACCCATATTTTGGCA 59.510 45.455 0.00 0.00 44.97 4.92
2501 3001 2.159296 GGTCAACGACCCATATTTTGGC 60.159 50.000 1.47 0.00 46.19 4.52
2502 3002 3.775661 GGTCAACGACCCATATTTTGG 57.224 47.619 1.47 0.00 46.19 3.28
2513 3013 1.666311 CCTCGAAGTCTGGTCAACGAC 60.666 57.143 0.00 0.00 0.00 4.34
2514 3014 0.596577 CCTCGAAGTCTGGTCAACGA 59.403 55.000 0.00 0.00 0.00 3.85
2515 3015 3.108521 CCTCGAAGTCTGGTCAACG 57.891 57.895 0.00 0.00 0.00 4.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.