Multiple sequence alignment - TraesCS4D01G122800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G122800 chr4D 100.000 3771 0 0 503 4273 106734619 106738389 0.000000e+00 6964.0
1 TraesCS4D01G122800 chr4D 100.000 244 0 0 1 244 106734117 106734360 6.520000e-123 451.0
2 TraesCS4D01G122800 chr4D 97.015 67 0 1 3861 3927 106737914 106737978 1.260000e-20 111.0
3 TraesCS4D01G122800 chr4D 97.015 67 0 1 3798 3862 106737977 106738043 1.260000e-20 111.0
4 TraesCS4D01G122800 chr4A 92.117 1535 66 21 885 2381 469106679 469105162 0.000000e+00 2113.0
5 TraesCS4D01G122800 chr4A 83.436 809 71 28 2377 3144 469104498 469103712 0.000000e+00 693.0
6 TraesCS4D01G122800 chr4A 91.036 357 14 6 3933 4271 469103142 469102786 2.330000e-127 466.0
7 TraesCS4D01G122800 chr4A 87.915 331 24 1 3499 3813 469103472 469103142 4.030000e-100 375.0
8 TraesCS4D01G122800 chr4A 90.179 224 18 2 1 221 469107047 469106825 5.410000e-74 289.0
9 TraesCS4D01G122800 chr4A 92.727 165 7 3 3284 3448 469103632 469103473 2.570000e-57 233.0
10 TraesCS4D01G122800 chr4A 95.556 45 2 0 3225 3269 469103713 469103669 5.930000e-09 73.1
11 TraesCS4D01G122800 chr4B 90.304 1186 60 18 1384 2517 169796199 169795017 0.000000e+00 1502.0
12 TraesCS4D01G122800 chr4B 88.580 1042 66 23 2857 3861 169794793 169793768 0.000000e+00 1216.0
13 TraesCS4D01G122800 chr4B 95.152 495 22 1 885 1379 169796781 169796289 0.000000e+00 780.0
14 TraesCS4D01G122800 chr4B 95.513 156 6 1 4118 4272 169793529 169793374 9.180000e-62 248.0
15 TraesCS4D01G122800 chr4B 87.500 200 22 3 684 882 444097976 444097779 1.200000e-55 228.0
16 TraesCS4D01G122800 chr4B 89.091 165 17 1 721 885 428836583 428836746 2.010000e-48 204.0
17 TraesCS4D01G122800 chr4B 91.176 68 4 2 2785 2850 169794918 169794851 1.640000e-14 91.6
18 TraesCS4D01G122800 chr4B 90.909 66 4 2 2818 2883 169794862 169794799 2.120000e-13 87.9
19 TraesCS4D01G122800 chr2D 88.024 167 20 0 724 890 383164572 383164406 9.370000e-47 198.0
20 TraesCS4D01G122800 chr2D 100.000 32 0 0 3690 3721 204389849 204389818 4.610000e-05 60.2
21 TraesCS4D01G122800 chr7A 87.425 167 21 0 721 887 549724296 549724462 4.360000e-45 193.0
22 TraesCS4D01G122800 chr3D 88.272 162 18 1 724 885 496348549 496348389 4.360000e-45 193.0
23 TraesCS4D01G122800 chr7D 87.805 164 19 1 724 887 539500512 539500674 1.570000e-44 191.0
24 TraesCS4D01G122800 chr7D 100.000 31 0 0 3689 3719 348128896 348128926 1.660000e-04 58.4
25 TraesCS4D01G122800 chr6D 87.425 167 20 1 721 887 447437138 447437303 1.570000e-44 191.0
26 TraesCS4D01G122800 chr6D 93.878 49 3 0 3584 3632 191275070 191275118 1.650000e-09 75.0
27 TraesCS4D01G122800 chr5D 87.349 166 21 0 724 889 520288470 520288305 1.570000e-44 191.0
28 TraesCS4D01G122800 chr2A 87.425 167 20 1 721 887 195858324 195858489 1.570000e-44 191.0
29 TraesCS4D01G122800 chr1D 88.462 52 2 4 139 189 259212518 259212470 4.610000e-05 60.2
30 TraesCS4D01G122800 chr1D 100.000 30 0 0 3690 3719 276504885 276504856 5.970000e-04 56.5
31 TraesCS4D01G122800 chr1D 100.000 29 0 0 3690 3718 159139604 159139632 2.000000e-03 54.7
32 TraesCS4D01G122800 chr7B 100.000 30 0 0 3690 3719 422859515 422859544 5.970000e-04 56.5
33 TraesCS4D01G122800 chr6A 100.000 30 0 0 3690 3719 448060632 448060661 5.970000e-04 56.5
34 TraesCS4D01G122800 chr1B 100.000 30 0 0 3690 3719 528134693 528134664 5.970000e-04 56.5
35 TraesCS4D01G122800 chr1A 100.000 30 0 0 3690 3719 376346313 376346284 5.970000e-04 56.5
36 TraesCS4D01G122800 chr2B 100.000 28 0 0 148 175 799129257 799129284 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G122800 chr4D 106734117 106738389 4272 False 1909.250000 6964 98.507500 1 4273 4 chr4D.!!$F1 4272
1 TraesCS4D01G122800 chr4A 469102786 469107047 4261 True 606.014286 2113 90.423714 1 4271 7 chr4A.!!$R1 4270
2 TraesCS4D01G122800 chr4B 169793374 169796781 3407 True 654.250000 1502 91.939000 885 4272 6 chr4B.!!$R2 3387

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
698 702 0.030195 TGGATGGCCTACAGATGGGA 60.030 55.0 3.32 0.0 34.31 4.37 F
805 809 0.100503 GAATTGGATTTGGGTCGGCG 59.899 55.0 0.00 0.0 0.00 6.46 F
987 991 0.178918 CCTATCTCCTCCACCCTCCC 60.179 65.0 0.00 0.0 0.00 4.30 F
2601 3420 0.240678 CGCAGCAAACAGGCATAACA 59.759 50.0 0.00 0.0 35.83 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2554 3362 0.250510 TGATTGCAACCGCTGGTGTA 60.251 50.000 0.0 0.0 39.64 2.90 R
2797 3616 0.397254 GCTCTCCAGCAGTACCCCTA 60.397 60.000 0.0 0.0 46.06 3.53 R
2798 3617 1.687493 GCTCTCCAGCAGTACCCCT 60.687 63.158 0.0 0.0 46.06 4.79 R
3919 4876 0.037419 ATGGTGCATTCGGTTTTGGC 60.037 50.000 0.0 0.0 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.302965 GTAATAAATATGGACCACCTAACGAC 57.697 38.462 0.00 0.00 37.04 4.34
37 38 5.048083 ACCACCTAACGACGACTACAAATAA 60.048 40.000 0.00 0.00 0.00 1.40
54 55 5.048083 ACAAATAATGAAGCAAGCCGAAGAA 60.048 36.000 0.00 0.00 0.00 2.52
65 66 1.098050 GCCGAAGAAGTGCCATCATT 58.902 50.000 0.00 0.00 0.00 2.57
79 80 1.961394 CATCATTGCCCTCCCTCATTG 59.039 52.381 0.00 0.00 0.00 2.82
80 81 0.259647 TCATTGCCCTCCCTCATTGG 59.740 55.000 0.00 0.00 0.00 3.16
96 97 4.724399 TCATTGGAGTTGAGCAAACCTTA 58.276 39.130 0.00 0.00 39.85 2.69
127 128 7.490962 ACAGTCAGAAAATCGTCATGTTAAA 57.509 32.000 0.00 0.00 0.00 1.52
140 141 7.156000 TCGTCATGTTAAAATCTAACAGACCA 58.844 34.615 14.53 6.29 40.27 4.02
142 143 7.244192 GTCATGTTAAAATCTAACAGACCAGC 58.756 38.462 3.94 0.00 40.27 4.85
143 144 6.939730 TCATGTTAAAATCTAACAGACCAGCA 59.060 34.615 3.94 0.00 40.27 4.41
179 180 9.857957 AAAGACGTTGAACCTAACAAAAATAAA 57.142 25.926 0.00 0.00 0.00 1.40
191 192 3.892588 ACAAAAATAAAAGAGCGGGTGGA 59.107 39.130 0.00 0.00 0.00 4.02
212 216 1.952296 GCACATCCTAAAGGCCATCAG 59.048 52.381 5.01 0.00 34.44 2.90
223 227 4.227134 CCATCAGAGGACGGCGGG 62.227 72.222 13.24 0.00 0.00 6.13
224 228 4.899239 CATCAGAGGACGGCGGGC 62.899 72.222 13.24 2.03 0.00 6.13
229 233 4.208686 GAGGACGGCGGGCTGTAG 62.209 72.222 13.24 0.00 35.39 2.74
237 241 2.358247 CGGGCTGTAGGCGTTGTT 60.358 61.111 0.00 0.00 42.94 2.83
238 242 2.677003 CGGGCTGTAGGCGTTGTTG 61.677 63.158 0.00 0.00 42.94 3.33
239 243 1.599797 GGGCTGTAGGCGTTGTTGT 60.600 57.895 0.00 0.00 42.94 3.32
240 244 1.170290 GGGCTGTAGGCGTTGTTGTT 61.170 55.000 0.00 0.00 42.94 2.83
241 245 0.040425 GGCTGTAGGCGTTGTTGTTG 60.040 55.000 0.00 0.00 42.94 3.33
242 246 0.661020 GCTGTAGGCGTTGTTGTTGT 59.339 50.000 0.00 0.00 0.00 3.32
243 247 1.064952 GCTGTAGGCGTTGTTGTTGTT 59.935 47.619 0.00 0.00 0.00 2.83
533 537 2.663826 AAAAAGAACAGCGGCACAAA 57.336 40.000 1.45 0.00 0.00 2.83
534 538 1.921243 AAAAGAACAGCGGCACAAAC 58.079 45.000 1.45 0.00 0.00 2.93
549 553 2.052468 ACAAACGGGAGGAGTAAACCT 58.948 47.619 0.00 0.00 43.64 3.50
555 559 2.692041 CGGGAGGAGTAAACCTAATCGT 59.308 50.000 0.00 0.00 40.73 3.73
556 560 3.131755 CGGGAGGAGTAAACCTAATCGTT 59.868 47.826 0.00 0.00 40.73 3.85
575 579 2.903135 GTTAGGATGCTAGAGATGCCCT 59.097 50.000 0.00 0.00 0.00 5.19
581 585 5.188751 AGGATGCTAGAGATGCCCTTAATAC 59.811 44.000 0.00 0.00 0.00 1.89
592 596 4.725490 TGCCCTTAATACAAGGCTATTCC 58.275 43.478 1.12 0.00 45.94 3.01
602 606 4.963318 CAAGGCTATTCCTGGTGATAGA 57.037 45.455 17.84 0.00 46.94 1.98
620 624 7.169982 GGTGATAGAGTCAATTAATCAGGTTCG 59.830 40.741 0.00 0.00 38.90 3.95
621 625 7.707035 GTGATAGAGTCAATTAATCAGGTTCGT 59.293 37.037 0.00 0.00 38.90 3.85
623 627 9.745880 GATAGAGTCAATTAATCAGGTTCGTAA 57.254 33.333 0.00 0.00 0.00 3.18
626 630 9.099454 AGAGTCAATTAATCAGGTTCGTAATTC 57.901 33.333 0.00 0.00 0.00 2.17
627 631 9.099454 GAGTCAATTAATCAGGTTCGTAATTCT 57.901 33.333 0.00 0.00 0.00 2.40
628 632 8.883731 AGTCAATTAATCAGGTTCGTAATTCTG 58.116 33.333 0.00 0.00 0.00 3.02
629 633 7.640240 GTCAATTAATCAGGTTCGTAATTCTGC 59.360 37.037 0.00 0.00 0.00 4.26
630 634 5.712217 TTAATCAGGTTCGTAATTCTGCG 57.288 39.130 0.00 0.00 0.00 5.18
631 635 2.736144 TCAGGTTCGTAATTCTGCGT 57.264 45.000 0.00 0.00 31.87 5.24
632 636 3.034721 TCAGGTTCGTAATTCTGCGTT 57.965 42.857 0.00 0.00 31.87 4.84
633 637 2.991190 TCAGGTTCGTAATTCTGCGTTC 59.009 45.455 0.00 0.00 31.87 3.95
634 638 2.993899 CAGGTTCGTAATTCTGCGTTCT 59.006 45.455 0.00 0.00 31.87 3.01
642 646 8.680261 GTTCGTAATTCTGCGTTCTACTATAAG 58.320 37.037 0.00 0.00 31.87 1.73
690 694 6.524101 TTTTAATTGAGTTGGATGGCCTAC 57.476 37.500 3.32 0.00 39.78 3.18
691 695 3.737559 AATTGAGTTGGATGGCCTACA 57.262 42.857 3.32 0.00 41.60 2.74
692 696 2.787473 TTGAGTTGGATGGCCTACAG 57.213 50.000 3.32 0.00 41.60 2.74
693 697 1.951209 TGAGTTGGATGGCCTACAGA 58.049 50.000 3.32 0.00 41.60 3.41
694 698 2.481441 TGAGTTGGATGGCCTACAGAT 58.519 47.619 3.32 0.00 41.60 2.90
695 699 2.171237 TGAGTTGGATGGCCTACAGATG 59.829 50.000 3.32 0.00 41.60 2.90
696 700 1.492176 AGTTGGATGGCCTACAGATGG 59.508 52.381 3.32 0.00 41.60 3.51
697 701 0.846015 TTGGATGGCCTACAGATGGG 59.154 55.000 3.32 0.00 34.31 4.00
698 702 0.030195 TGGATGGCCTACAGATGGGA 60.030 55.000 3.32 0.00 34.31 4.37
699 703 1.140312 GGATGGCCTACAGATGGGAA 58.860 55.000 3.32 0.00 0.00 3.97
700 704 1.202818 GGATGGCCTACAGATGGGAAC 60.203 57.143 3.32 0.00 0.00 3.62
701 705 0.469917 ATGGCCTACAGATGGGAACG 59.530 55.000 3.32 0.00 0.00 3.95
702 706 1.523938 GGCCTACAGATGGGAACGC 60.524 63.158 0.00 0.00 0.00 4.84
703 707 1.883084 GCCTACAGATGGGAACGCG 60.883 63.158 3.53 3.53 0.00 6.01
704 708 1.227263 CCTACAGATGGGAACGCGG 60.227 63.158 12.47 0.00 0.00 6.46
705 709 1.883084 CTACAGATGGGAACGCGGC 60.883 63.158 12.47 0.92 0.00 6.53
706 710 3.709880 TACAGATGGGAACGCGGCG 62.710 63.158 22.36 22.36 0.00 6.46
723 727 3.091529 GGACGACGAGGAGACGAG 58.908 66.667 0.00 0.00 40.26 4.18
724 728 2.400402 GACGACGAGGAGACGAGC 59.600 66.667 0.00 0.00 40.26 5.03
725 729 3.098377 GACGACGAGGAGACGAGCC 62.098 68.421 0.00 0.00 40.26 4.70
726 730 4.225340 CGACGAGGAGACGAGCCG 62.225 72.222 0.00 0.00 40.26 5.52
727 731 2.818714 GACGAGGAGACGAGCCGA 60.819 66.667 1.50 0.00 37.03 5.54
728 732 3.098377 GACGAGGAGACGAGCCGAC 62.098 68.421 1.50 0.00 37.03 4.79
729 733 3.125573 CGAGGAGACGAGCCGACA 61.126 66.667 1.50 0.00 35.09 4.35
730 734 2.486042 GAGGAGACGAGCCGACAC 59.514 66.667 1.50 0.00 0.00 3.67
731 735 2.282251 AGGAGACGAGCCGACACA 60.282 61.111 1.50 0.00 0.00 3.72
732 736 1.658686 GAGGAGACGAGCCGACACAT 61.659 60.000 1.50 0.00 0.00 3.21
733 737 1.215647 GGAGACGAGCCGACACATT 59.784 57.895 1.50 0.00 0.00 2.71
734 738 0.389948 GGAGACGAGCCGACACATTT 60.390 55.000 1.50 0.00 0.00 2.32
735 739 0.992802 GAGACGAGCCGACACATTTC 59.007 55.000 1.50 0.00 0.00 2.17
736 740 0.317160 AGACGAGCCGACACATTTCA 59.683 50.000 1.50 0.00 0.00 2.69
737 741 0.716108 GACGAGCCGACACATTTCAG 59.284 55.000 1.50 0.00 0.00 3.02
738 742 0.317160 ACGAGCCGACACATTTCAGA 59.683 50.000 1.50 0.00 0.00 3.27
739 743 0.716108 CGAGCCGACACATTTCAGAC 59.284 55.000 0.00 0.00 0.00 3.51
740 744 0.716108 GAGCCGACACATTTCAGACG 59.284 55.000 0.00 0.00 0.00 4.18
741 745 1.132640 GCCGACACATTTCAGACGC 59.867 57.895 0.00 0.00 0.00 5.19
742 746 1.565156 GCCGACACATTTCAGACGCA 61.565 55.000 0.00 0.00 0.00 5.24
743 747 0.865111 CCGACACATTTCAGACGCAA 59.135 50.000 0.00 0.00 0.00 4.85
744 748 1.464608 CCGACACATTTCAGACGCAAT 59.535 47.619 0.00 0.00 0.00 3.56
745 749 2.095768 CCGACACATTTCAGACGCAATT 60.096 45.455 0.00 0.00 0.00 2.32
746 750 3.554524 CGACACATTTCAGACGCAATTT 58.445 40.909 0.00 0.00 0.00 1.82
747 751 3.974401 CGACACATTTCAGACGCAATTTT 59.026 39.130 0.00 0.00 0.00 1.82
748 752 4.143762 CGACACATTTCAGACGCAATTTTG 60.144 41.667 0.00 0.00 0.00 2.44
749 753 4.050553 ACACATTTCAGACGCAATTTTGG 58.949 39.130 0.00 0.00 0.00 3.28
750 754 4.202101 ACACATTTCAGACGCAATTTTGGA 60.202 37.500 0.00 0.00 0.00 3.53
751 755 4.148696 CACATTTCAGACGCAATTTTGGAC 59.851 41.667 0.00 0.00 0.00 4.02
752 756 3.363341 TTTCAGACGCAATTTTGGACC 57.637 42.857 0.00 0.00 0.00 4.46
753 757 0.871722 TCAGACGCAATTTTGGACCG 59.128 50.000 0.00 0.00 0.00 4.79
754 758 0.871722 CAGACGCAATTTTGGACCGA 59.128 50.000 0.00 0.00 0.00 4.69
755 759 1.265635 CAGACGCAATTTTGGACCGAA 59.734 47.619 0.00 0.00 0.00 4.30
756 760 1.950909 AGACGCAATTTTGGACCGAAA 59.049 42.857 9.41 9.41 0.00 3.46
757 761 2.359531 AGACGCAATTTTGGACCGAAAA 59.640 40.909 11.03 7.50 0.00 2.29
758 762 3.005367 AGACGCAATTTTGGACCGAAAAT 59.995 39.130 11.03 9.31 37.16 1.82
759 763 3.056304 ACGCAATTTTGGACCGAAAATG 58.944 40.909 15.51 15.51 36.01 2.32
760 764 3.243569 ACGCAATTTTGGACCGAAAATGA 60.244 39.130 21.85 0.00 36.01 2.57
761 765 3.364621 CGCAATTTTGGACCGAAAATGAG 59.635 43.478 21.85 16.25 36.01 2.90
762 766 4.306600 GCAATTTTGGACCGAAAATGAGT 58.693 39.130 21.85 0.00 36.01 3.41
763 767 4.385748 GCAATTTTGGACCGAAAATGAGTC 59.614 41.667 21.85 4.97 36.01 3.36
764 768 3.889196 TTTTGGACCGAAAATGAGTCG 57.111 42.857 4.26 0.00 38.24 4.18
769 773 2.020016 CGAAAATGAGTCGGCGCG 59.980 61.111 0.00 0.00 34.85 6.86
770 774 2.399611 GAAAATGAGTCGGCGCGG 59.600 61.111 8.83 8.94 0.00 6.46
771 775 2.047655 AAAATGAGTCGGCGCGGA 60.048 55.556 14.27 14.27 0.00 5.54
772 776 1.429148 GAAAATGAGTCGGCGCGGAT 61.429 55.000 21.12 9.94 0.00 4.18
773 777 1.705337 AAAATGAGTCGGCGCGGATG 61.705 55.000 21.12 0.75 0.00 3.51
786 790 4.899239 GGATGCCAGGCGGACGAG 62.899 72.222 7.03 0.00 0.00 4.18
787 791 3.838271 GATGCCAGGCGGACGAGA 61.838 66.667 7.03 0.00 0.00 4.04
788 792 3.371097 GATGCCAGGCGGACGAGAA 62.371 63.158 7.03 0.00 0.00 2.87
789 793 2.650813 GATGCCAGGCGGACGAGAAT 62.651 60.000 7.03 0.00 0.00 2.40
790 794 2.125106 GCCAGGCGGACGAGAATT 60.125 61.111 0.00 0.00 0.00 2.17
791 795 2.464459 GCCAGGCGGACGAGAATTG 61.464 63.158 0.00 0.00 0.00 2.32
792 796 1.815421 CCAGGCGGACGAGAATTGG 60.815 63.158 0.00 0.00 0.00 3.16
793 797 1.218047 CAGGCGGACGAGAATTGGA 59.782 57.895 0.00 0.00 0.00 3.53
794 798 0.179073 CAGGCGGACGAGAATTGGAT 60.179 55.000 0.00 0.00 0.00 3.41
795 799 0.541863 AGGCGGACGAGAATTGGATT 59.458 50.000 0.00 0.00 0.00 3.01
796 800 1.065418 AGGCGGACGAGAATTGGATTT 60.065 47.619 0.00 0.00 0.00 2.17
797 801 1.064060 GGCGGACGAGAATTGGATTTG 59.936 52.381 0.00 0.00 0.00 2.32
798 802 1.064060 GCGGACGAGAATTGGATTTGG 59.936 52.381 0.00 0.00 0.00 3.28
799 803 1.670811 CGGACGAGAATTGGATTTGGG 59.329 52.381 0.00 0.00 0.00 4.12
800 804 2.723273 GGACGAGAATTGGATTTGGGT 58.277 47.619 0.00 0.00 0.00 4.51
801 805 2.683362 GGACGAGAATTGGATTTGGGTC 59.317 50.000 0.00 0.00 0.00 4.46
802 806 2.351726 GACGAGAATTGGATTTGGGTCG 59.648 50.000 0.00 0.00 0.00 4.79
803 807 1.670811 CGAGAATTGGATTTGGGTCGG 59.329 52.381 0.00 0.00 0.00 4.79
804 808 1.405463 GAGAATTGGATTTGGGTCGGC 59.595 52.381 0.00 0.00 0.00 5.54
805 809 0.100503 GAATTGGATTTGGGTCGGCG 59.899 55.000 0.00 0.00 0.00 6.46
806 810 1.944234 AATTGGATTTGGGTCGGCGC 61.944 55.000 0.00 0.00 0.00 6.53
809 813 3.428282 GATTTGGGTCGGCGCGTT 61.428 61.111 8.43 0.00 0.00 4.84
810 814 3.661025 GATTTGGGTCGGCGCGTTG 62.661 63.158 8.43 0.00 0.00 4.10
822 826 2.597510 GCGTTGGGCCTCCACTTT 60.598 61.111 4.53 0.00 43.94 2.66
823 827 2.200337 GCGTTGGGCCTCCACTTTT 61.200 57.895 4.53 0.00 43.94 2.27
824 828 1.659794 CGTTGGGCCTCCACTTTTG 59.340 57.895 4.53 0.00 43.94 2.44
825 829 1.106944 CGTTGGGCCTCCACTTTTGT 61.107 55.000 4.53 0.00 43.94 2.83
826 830 0.673985 GTTGGGCCTCCACTTTTGTC 59.326 55.000 4.53 0.00 43.94 3.18
827 831 0.469144 TTGGGCCTCCACTTTTGTCC 60.469 55.000 4.53 0.00 43.94 4.02
828 832 1.971695 GGGCCTCCACTTTTGTCCG 60.972 63.158 0.84 0.00 0.00 4.79
829 833 2.626780 GGCCTCCACTTTTGTCCGC 61.627 63.158 0.00 0.00 0.00 5.54
830 834 2.966309 GCCTCCACTTTTGTCCGCG 61.966 63.158 0.00 0.00 0.00 6.46
831 835 2.556287 CTCCACTTTTGTCCGCGC 59.444 61.111 0.00 0.00 0.00 6.86
832 836 2.966309 CTCCACTTTTGTCCGCGCC 61.966 63.158 0.00 0.00 0.00 6.53
833 837 4.383602 CCACTTTTGTCCGCGCCG 62.384 66.667 0.00 0.00 0.00 6.46
834 838 3.342627 CACTTTTGTCCGCGCCGA 61.343 61.111 0.00 0.00 0.00 5.54
835 839 3.343421 ACTTTTGTCCGCGCCGAC 61.343 61.111 20.04 20.04 0.00 4.79
836 840 4.084888 CTTTTGTCCGCGCCGACC 62.085 66.667 23.06 8.48 31.35 4.79
846 850 3.496131 CGCCGACCCAAACCGATG 61.496 66.667 0.00 0.00 0.00 3.84
847 851 3.810896 GCCGACCCAAACCGATGC 61.811 66.667 0.00 0.00 0.00 3.91
848 852 2.359354 CCGACCCAAACCGATGCA 60.359 61.111 0.00 0.00 0.00 3.96
849 853 2.398554 CCGACCCAAACCGATGCAG 61.399 63.158 0.00 0.00 0.00 4.41
850 854 1.375396 CGACCCAAACCGATGCAGA 60.375 57.895 0.00 0.00 0.00 4.26
851 855 1.635663 CGACCCAAACCGATGCAGAC 61.636 60.000 0.00 0.00 0.00 3.51
852 856 0.605319 GACCCAAACCGATGCAGACA 60.605 55.000 0.00 0.00 0.00 3.41
853 857 0.606401 ACCCAAACCGATGCAGACAG 60.606 55.000 0.00 0.00 0.00 3.51
854 858 0.321564 CCCAAACCGATGCAGACAGA 60.322 55.000 0.00 0.00 0.00 3.41
855 859 0.798776 CCAAACCGATGCAGACAGAC 59.201 55.000 0.00 0.00 0.00 3.51
856 860 1.511850 CAAACCGATGCAGACAGACA 58.488 50.000 0.00 0.00 0.00 3.41
857 861 1.872952 CAAACCGATGCAGACAGACAA 59.127 47.619 0.00 0.00 0.00 3.18
858 862 2.254546 AACCGATGCAGACAGACAAA 57.745 45.000 0.00 0.00 0.00 2.83
859 863 2.254546 ACCGATGCAGACAGACAAAA 57.745 45.000 0.00 0.00 0.00 2.44
860 864 2.783135 ACCGATGCAGACAGACAAAAT 58.217 42.857 0.00 0.00 0.00 1.82
861 865 2.485426 ACCGATGCAGACAGACAAAATG 59.515 45.455 0.00 0.00 0.00 2.32
862 866 2.159476 CCGATGCAGACAGACAAAATGG 60.159 50.000 0.00 0.00 0.00 3.16
863 867 2.159476 CGATGCAGACAGACAAAATGGG 60.159 50.000 0.00 0.00 0.00 4.00
864 868 2.363306 TGCAGACAGACAAAATGGGT 57.637 45.000 0.00 0.00 0.00 4.51
865 869 2.229792 TGCAGACAGACAAAATGGGTC 58.770 47.619 0.00 0.00 35.50 4.46
866 870 2.229792 GCAGACAGACAAAATGGGTCA 58.770 47.619 0.00 0.00 37.74 4.02
867 871 2.821969 GCAGACAGACAAAATGGGTCAT 59.178 45.455 0.00 0.00 37.74 3.06
868 872 3.119708 GCAGACAGACAAAATGGGTCATC 60.120 47.826 0.00 0.00 37.74 2.92
869 873 3.441572 CAGACAGACAAAATGGGTCATCC 59.558 47.826 0.00 0.00 37.74 3.51
881 885 1.106285 GGTCATCCCATTGGAGTTGC 58.894 55.000 3.62 0.00 46.08 4.17
882 886 1.341383 GGTCATCCCATTGGAGTTGCT 60.341 52.381 3.62 0.00 46.08 3.91
883 887 2.019984 GTCATCCCATTGGAGTTGCTC 58.980 52.381 3.62 0.00 46.08 4.26
911 915 0.608856 CCCACATGGTAGCAAGCACA 60.609 55.000 0.00 0.00 35.57 4.57
912 916 0.523072 CCACATGGTAGCAAGCACAC 59.477 55.000 0.00 0.00 35.57 3.82
947 951 0.883833 GACATTTGGACACCTGCCAG 59.116 55.000 0.00 0.00 36.64 4.85
962 966 0.737219 GCCAGTCCATCACAATCAGC 59.263 55.000 0.00 0.00 0.00 4.26
987 991 0.178918 CCTATCTCCTCCACCCTCCC 60.179 65.000 0.00 0.00 0.00 4.30
989 993 2.074579 CTATCTCCTCCACCCTCCCTA 58.925 57.143 0.00 0.00 0.00 3.53
1113 1117 2.626780 GCTGTCGTTTTCCAGCCCC 61.627 63.158 0.24 0.00 46.55 5.80
1134 1138 1.437986 GAGATCAACGGCGGCTACT 59.562 57.895 13.24 3.59 0.00 2.57
1240 1244 1.996191 CCGAAAAGAGCAGCACTAGAC 59.004 52.381 0.00 0.00 0.00 2.59
1364 1368 5.415221 GTCTCTCTCCCTGTCTAACAATTG 58.585 45.833 3.24 3.24 0.00 2.32
1381 1385 7.389803 AACAATTGACAAATGATCATCCGTA 57.610 32.000 13.59 0.00 0.00 4.02
1487 1577 2.730733 GCCATCGAGATCGCCTCA 59.269 61.111 0.00 0.00 42.06 3.86
1493 1583 1.369448 CGAGATCGCCTCAGTACGC 60.369 63.158 5.69 0.00 42.06 4.42
1887 2008 1.341156 CCGGGAGCCTCCTCATCTTT 61.341 60.000 11.29 0.00 39.96 2.52
1941 2063 7.609146 TCACTTCTCACTATTGATCAAAATGCT 59.391 33.333 13.09 0.00 0.00 3.79
1946 2068 4.802039 CACTATTGATCAAAATGCTGGCAC 59.198 41.667 13.09 0.00 0.00 5.01
1947 2069 3.965379 ATTGATCAAAATGCTGGCACA 57.035 38.095 13.09 0.00 0.00 4.57
1948 2070 2.728690 TGATCAAAATGCTGGCACAC 57.271 45.000 0.00 0.00 0.00 3.82
1949 2071 2.241160 TGATCAAAATGCTGGCACACT 58.759 42.857 0.00 0.00 0.00 3.55
1950 2072 2.629137 TGATCAAAATGCTGGCACACTT 59.371 40.909 0.00 0.00 0.00 3.16
1951 2073 2.512485 TCAAAATGCTGGCACACTTG 57.488 45.000 0.00 2.59 0.00 3.16
2040 2164 3.430236 CCAAAATGCCTCCCCGATTAAAC 60.430 47.826 0.00 0.00 0.00 2.01
2049 2173 3.688235 TCCCCGATTAAACCGTCAAATT 58.312 40.909 0.00 0.00 0.00 1.82
2118 2242 5.131809 CCCAGGACTCTCCAAATAAGATTCT 59.868 44.000 0.00 0.00 39.61 2.40
2193 2322 2.749076 TGTTGTAGATTGCTGTGATGGC 59.251 45.455 0.00 0.00 0.00 4.40
2263 2402 0.887933 AAGCACAATAAGCCGTTGGG 59.112 50.000 0.00 0.00 33.15 4.12
2371 2510 6.430000 ACCGGTACATATATCAAGCAAATTCC 59.570 38.462 4.49 0.00 0.00 3.01
2383 3190 5.413833 TCAAGCAAATTCCATCACTCTCTTC 59.586 40.000 0.00 0.00 0.00 2.87
2442 3250 1.535204 CCTGCAAACACACATCCCCC 61.535 60.000 0.00 0.00 0.00 5.40
2444 3252 0.827089 TGCAAACACACATCCCCCTG 60.827 55.000 0.00 0.00 0.00 4.45
2498 3306 5.167121 AGCAGCAGATACAGATAATTAGCG 58.833 41.667 0.00 0.00 0.00 4.26
2532 3340 8.162878 GATGCAATCAACCCATATATATGAGG 57.837 38.462 21.97 20.99 44.70 3.86
2533 3341 7.269522 TGCAATCAACCCATATATATGAGGA 57.730 36.000 25.21 16.64 35.75 3.71
2534 3342 7.697946 TGCAATCAACCCATATATATGAGGAA 58.302 34.615 25.21 15.55 35.75 3.36
2535 3343 8.169393 TGCAATCAACCCATATATATGAGGAAA 58.831 33.333 25.21 15.32 35.75 3.13
2536 3344 8.680903 GCAATCAACCCATATATATGAGGAAAG 58.319 37.037 25.21 17.41 35.75 2.62
2537 3345 9.964354 CAATCAACCCATATATATGAGGAAAGA 57.036 33.333 25.21 20.19 35.75 2.52
2539 3347 8.742125 TCAACCCATATATATGAGGAAAGAGT 57.258 34.615 25.21 8.86 35.75 3.24
2540 3348 8.597167 TCAACCCATATATATGAGGAAAGAGTG 58.403 37.037 25.21 16.19 35.75 3.51
2554 3362 7.397476 TGAGGAAAGAGTGTATGACTATCACTT 59.603 37.037 0.00 0.00 41.58 3.16
2556 3364 8.688151 AGGAAAGAGTGTATGACTATCACTTAC 58.312 37.037 0.00 0.00 41.58 2.34
2601 3420 0.240678 CGCAGCAAACAGGCATAACA 59.759 50.000 0.00 0.00 35.83 2.41
2608 3427 3.742640 GCAAACAGGCATAACAAACCCAA 60.743 43.478 0.00 0.00 0.00 4.12
2612 3431 4.411927 ACAGGCATAACAAACCCAATGTA 58.588 39.130 0.00 0.00 0.00 2.29
2655 3474 2.125552 CTCAATCTCACCGCCGCA 60.126 61.111 0.00 0.00 0.00 5.69
2658 3477 4.015406 AATCTCACCGCCGCACCA 62.015 61.111 0.00 0.00 0.00 4.17
2681 3500 4.599241 AGGGAAAGGAGATGAACTGAAGAA 59.401 41.667 0.00 0.00 0.00 2.52
2682 3501 4.940654 GGGAAAGGAGATGAACTGAAGAAG 59.059 45.833 0.00 0.00 0.00 2.85
2692 3511 1.274712 ACTGAAGAAGCTCAGGGAGG 58.725 55.000 5.76 0.00 46.02 4.30
2693 3512 1.203237 ACTGAAGAAGCTCAGGGAGGA 60.203 52.381 5.76 0.00 46.02 3.71
2698 3517 0.325203 GAAGCTCAGGGAGGAGGTCT 60.325 60.000 0.00 0.00 44.32 3.85
2712 3531 2.556287 GTCTGGTTTGCTTCCGCG 59.444 61.111 0.00 0.00 39.65 6.46
2725 3544 1.681793 CTTCCGCGATAAGAGAAGGGA 59.318 52.381 8.23 0.00 33.61 4.20
2734 3553 1.762708 AAGAGAAGGGAGAGAGAGCG 58.237 55.000 0.00 0.00 0.00 5.03
2742 3561 1.341606 GGAGAGAGAGCGTGTTTTCG 58.658 55.000 0.00 0.00 0.00 3.46
2747 3566 1.000955 AGAGAGCGTGTTTTCGTGGAT 59.999 47.619 0.00 0.00 0.00 3.41
2757 3576 2.097680 TTTCGTGGATCCCGGTAAAC 57.902 50.000 18.67 5.38 0.00 2.01
2772 3591 3.216800 GGTAAACGGAAAGGAAGTTGGT 58.783 45.455 0.00 0.00 0.00 3.67
2775 3594 2.256117 ACGGAAAGGAAGTTGGTGAG 57.744 50.000 0.00 0.00 0.00 3.51
2778 3597 1.609072 GGAAAGGAAGTTGGTGAGTGC 59.391 52.381 0.00 0.00 0.00 4.40
2797 3616 4.472833 AGTGCTGATTATCAAGGAGGAAGT 59.527 41.667 0.00 0.00 0.00 3.01
2798 3617 5.663106 AGTGCTGATTATCAAGGAGGAAGTA 59.337 40.000 0.00 0.00 0.00 2.24
2799 3618 5.988561 GTGCTGATTATCAAGGAGGAAGTAG 59.011 44.000 0.00 0.00 0.00 2.57
2803 3622 2.972153 ATCAAGGAGGAAGTAGGGGT 57.028 50.000 0.00 0.00 0.00 4.95
2863 3735 1.977412 GCACGTCGAACTAGACACTTC 59.023 52.381 0.00 0.00 40.98 3.01
3052 3955 8.107399 AGTGTACCTTACCTTTCAAAATAAGC 57.893 34.615 0.00 0.00 0.00 3.09
3053 3956 7.019418 GTGTACCTTACCTTTCAAAATAAGCG 58.981 38.462 0.00 0.00 0.00 4.68
3066 3969 5.799936 TCAAAATAAGCGAGTGCAAAATAGC 59.200 36.000 0.00 0.00 46.23 2.97
3079 3982 3.976942 GCAAAATAGCGCATCATGGTAAG 59.023 43.478 11.47 0.00 0.00 2.34
3163 4066 4.732285 AAGAGTAACTTGCAACATGTCG 57.268 40.909 0.00 0.00 37.45 4.35
3177 4080 2.079158 CATGTCGTGCTCAAGGAACAT 58.921 47.619 0.00 0.00 0.00 2.71
3180 4083 1.873591 GTCGTGCTCAAGGAACATGTT 59.126 47.619 11.78 11.78 0.00 2.71
3186 4089 5.393962 GTGCTCAAGGAACATGTTATTCAC 58.606 41.667 11.95 9.98 0.00 3.18
3217 4120 2.668279 CGCTAAATTTCACGCCAAAGCT 60.668 45.455 0.00 0.00 36.60 3.74
3223 4126 0.881118 TTCACGCCAAAGCTTGATCC 59.119 50.000 0.00 0.00 45.61 3.36
3305 4243 3.441572 AGATGCCAAATACAAGCTGTGTC 59.558 43.478 5.04 0.00 41.98 3.67
3327 4265 5.461737 GTCGGAAAACATTTCAAGCAATTCA 59.538 36.000 5.32 0.00 0.00 2.57
3363 4304 6.237901 AGTGTCAGACTGGCATTATAAACAA 58.762 36.000 13.86 0.00 33.03 2.83
3364 4305 6.149474 AGTGTCAGACTGGCATTATAAACAAC 59.851 38.462 13.86 0.00 33.03 3.32
3365 4306 6.000840 TGTCAGACTGGCATTATAAACAACA 58.999 36.000 5.43 0.00 0.00 3.33
3411 4352 8.535335 AGATTATAACAGAGCTGACAAAGAAGA 58.465 33.333 4.21 0.00 0.00 2.87
3453 4394 6.499172 TCAATGATCTAAACGCTCTACAGAG 58.501 40.000 1.68 1.68 44.75 3.35
3454 4395 4.902443 TGATCTAAACGCTCTACAGAGG 57.098 45.455 8.29 1.59 42.29 3.69
3469 4410 4.522722 ACAGAGGAAGTAACAGCTACAC 57.477 45.455 0.00 0.00 32.37 2.90
3470 4411 4.153411 ACAGAGGAAGTAACAGCTACACT 58.847 43.478 0.00 0.00 32.37 3.55
3471 4412 5.322754 ACAGAGGAAGTAACAGCTACACTA 58.677 41.667 0.00 0.00 32.37 2.74
3472 4413 5.952947 ACAGAGGAAGTAACAGCTACACTAT 59.047 40.000 0.00 0.00 32.37 2.12
3473 4414 6.127591 ACAGAGGAAGTAACAGCTACACTATG 60.128 42.308 0.00 0.00 31.79 2.23
3474 4415 5.361285 AGAGGAAGTAACAGCTACACTATGG 59.639 44.000 0.00 0.00 32.37 2.74
3475 4416 4.406003 AGGAAGTAACAGCTACACTATGGG 59.594 45.833 0.00 0.00 32.37 4.00
3476 4417 4.404715 GGAAGTAACAGCTACACTATGGGA 59.595 45.833 0.00 0.00 32.37 4.37
3486 4427 7.147479 ACAGCTACACTATGGGATCTAACAATT 60.147 37.037 0.00 0.00 0.00 2.32
3512 4453 0.524862 GCACAGAAATGTGAGCCCAG 59.475 55.000 12.34 0.00 42.02 4.45
3516 4457 1.538512 CAGAAATGTGAGCCCAGTGTG 59.461 52.381 0.00 0.00 0.00 3.82
3521 4462 5.130975 AGAAATGTGAGCCCAGTGTGATATA 59.869 40.000 0.00 0.00 0.00 0.86
3569 4510 4.289672 AGGAATAGAGAACTTGCAGGGAAA 59.710 41.667 0.00 0.00 0.00 3.13
3580 4521 3.272574 TGCAGGGAAAGAGATGTCATC 57.727 47.619 4.52 4.52 0.00 2.92
3581 4522 2.573009 TGCAGGGAAAGAGATGTCATCA 59.427 45.455 15.20 0.00 0.00 3.07
3596 4537 7.443477 AGATGTCATCACAGGAAATGAGATAG 58.557 38.462 15.20 0.00 37.15 2.08
3601 4542 4.132336 TCACAGGAAATGAGATAGCATGC 58.868 43.478 10.51 10.51 0.00 4.06
3712 4669 2.162681 CCTACAAACCAAAGGGCTCTG 58.837 52.381 0.00 0.00 37.90 3.35
3736 4693 4.371681 AGGAAATGAGGCCTAAGAGGTAA 58.628 43.478 4.42 0.00 37.80 2.85
3806 4763 9.639601 TGAAGTAACAATCAACTACTGTATGAG 57.360 33.333 0.00 0.00 0.00 2.90
3807 4764 9.856488 GAAGTAACAATCAACTACTGTATGAGA 57.144 33.333 0.00 0.00 0.00 3.27
3811 4768 8.498054 AACAATCAACTACTGTATGAGAATGG 57.502 34.615 0.00 0.00 0.00 3.16
3812 4769 7.050377 ACAATCAACTACTGTATGAGAATGGG 58.950 38.462 0.00 0.00 0.00 4.00
3813 4770 6.814954 ATCAACTACTGTATGAGAATGGGT 57.185 37.500 0.00 0.00 0.00 4.51
3814 4771 6.620877 TCAACTACTGTATGAGAATGGGTT 57.379 37.500 0.00 0.00 0.00 4.11
3815 4772 7.727578 TCAACTACTGTATGAGAATGGGTTA 57.272 36.000 0.00 0.00 0.00 2.85
3816 4773 8.319057 TCAACTACTGTATGAGAATGGGTTAT 57.681 34.615 0.00 0.00 0.00 1.89
3817 4774 9.429109 TCAACTACTGTATGAGAATGGGTTATA 57.571 33.333 0.00 0.00 0.00 0.98
3823 4780 9.920946 ACTGTATGAGAATGGGTTATAAACAAT 57.079 29.630 2.32 0.00 0.00 2.71
3825 4782 8.629158 TGTATGAGAATGGGTTATAAACAATGC 58.371 33.333 2.32 0.00 0.00 3.56
3826 4783 7.658525 ATGAGAATGGGTTATAAACAATGCA 57.341 32.000 2.32 0.00 0.00 3.96
3827 4784 7.658525 TGAGAATGGGTTATAAACAATGCAT 57.341 32.000 2.32 0.00 0.00 3.96
3828 4785 7.490840 TGAGAATGGGTTATAAACAATGCATG 58.509 34.615 0.00 0.00 0.00 4.06
3829 4786 6.819284 AGAATGGGTTATAAACAATGCATGG 58.181 36.000 0.00 0.00 0.00 3.66
3830 4787 6.383726 AGAATGGGTTATAAACAATGCATGGT 59.616 34.615 0.00 0.00 0.00 3.55
3831 4788 5.590530 TGGGTTATAAACAATGCATGGTC 57.409 39.130 7.31 0.00 0.00 4.02
3832 4789 5.268387 TGGGTTATAAACAATGCATGGTCT 58.732 37.500 7.31 0.00 0.00 3.85
3833 4790 6.427441 TGGGTTATAAACAATGCATGGTCTA 58.573 36.000 7.31 0.00 0.00 2.59
3834 4791 6.320164 TGGGTTATAAACAATGCATGGTCTAC 59.680 38.462 7.31 1.89 0.00 2.59
3835 4792 6.320164 GGGTTATAAACAATGCATGGTCTACA 59.680 38.462 7.31 0.00 0.00 2.74
3836 4793 7.417612 GGTTATAAACAATGCATGGTCTACAG 58.582 38.462 7.31 0.00 0.00 2.74
3837 4794 7.417612 GTTATAAACAATGCATGGTCTACAGG 58.582 38.462 7.31 0.00 0.00 4.00
3838 4795 3.439857 AACAATGCATGGTCTACAGGT 57.560 42.857 7.31 0.00 32.37 4.00
3839 4796 3.439857 ACAATGCATGGTCTACAGGTT 57.560 42.857 0.00 0.00 32.37 3.50
3840 4797 3.084039 ACAATGCATGGTCTACAGGTTG 58.916 45.455 0.00 0.00 32.37 3.77
3841 4798 3.244875 ACAATGCATGGTCTACAGGTTGA 60.245 43.478 0.00 0.00 32.37 3.18
3842 4799 3.719268 ATGCATGGTCTACAGGTTGAA 57.281 42.857 0.00 0.00 32.37 2.69
3843 4800 2.778299 TGCATGGTCTACAGGTTGAAC 58.222 47.619 0.00 0.00 32.37 3.18
3844 4801 2.084546 GCATGGTCTACAGGTTGAACC 58.915 52.381 6.16 6.16 38.99 3.62
3845 4802 2.711542 CATGGTCTACAGGTTGAACCC 58.288 52.381 11.41 0.00 39.75 4.11
3846 4803 2.112279 TGGTCTACAGGTTGAACCCT 57.888 50.000 11.41 0.00 39.75 4.34
3847 4804 3.263369 TGGTCTACAGGTTGAACCCTA 57.737 47.619 11.41 0.00 39.75 3.53
3848 4805 3.589641 TGGTCTACAGGTTGAACCCTAA 58.410 45.455 11.41 0.00 39.75 2.69
3849 4806 3.581332 TGGTCTACAGGTTGAACCCTAAG 59.419 47.826 11.41 5.95 39.75 2.18
3850 4807 3.836562 GGTCTACAGGTTGAACCCTAAGA 59.163 47.826 11.41 8.29 39.75 2.10
3851 4808 4.322574 GGTCTACAGGTTGAACCCTAAGAC 60.323 50.000 22.42 22.42 41.59 3.01
3852 4809 4.527427 GTCTACAGGTTGAACCCTAAGACT 59.473 45.833 22.87 0.00 40.42 3.24
3853 4810 3.771577 ACAGGTTGAACCCTAAGACTG 57.228 47.619 11.41 3.29 39.75 3.51
3854 4811 2.372172 ACAGGTTGAACCCTAAGACTGG 59.628 50.000 11.41 0.00 39.75 4.00
3855 4812 1.351350 AGGTTGAACCCTAAGACTGGC 59.649 52.381 11.41 0.00 39.75 4.85
3856 4813 1.613520 GGTTGAACCCTAAGACTGGCC 60.614 57.143 2.08 0.00 30.04 5.36
3857 4814 1.073284 GTTGAACCCTAAGACTGGCCA 59.927 52.381 4.71 4.71 0.00 5.36
3858 4815 1.440618 TGAACCCTAAGACTGGCCAA 58.559 50.000 7.01 0.00 0.00 4.52
3859 4816 1.777878 TGAACCCTAAGACTGGCCAAA 59.222 47.619 7.01 0.00 0.00 3.28
3860 4817 2.175931 TGAACCCTAAGACTGGCCAAAA 59.824 45.455 7.01 0.00 0.00 2.44
3861 4818 2.287977 ACCCTAAGACTGGCCAAAAC 57.712 50.000 7.01 0.54 0.00 2.43
3862 4819 1.780919 ACCCTAAGACTGGCCAAAACT 59.219 47.619 7.01 3.28 0.00 2.66
3863 4820 2.162681 CCCTAAGACTGGCCAAAACTG 58.837 52.381 7.01 0.00 0.00 3.16
3864 4821 2.489073 CCCTAAGACTGGCCAAAACTGT 60.489 50.000 7.01 0.00 0.00 3.55
3865 4822 3.244770 CCCTAAGACTGGCCAAAACTGTA 60.245 47.826 7.01 0.00 0.00 2.74
3866 4823 4.567747 CCCTAAGACTGGCCAAAACTGTAT 60.568 45.833 7.01 0.00 0.00 2.29
3867 4824 4.396166 CCTAAGACTGGCCAAAACTGTATG 59.604 45.833 7.01 0.00 0.00 2.39
3875 4832 3.131046 GGCCAAAACTGTATGAGAATGGG 59.869 47.826 0.00 0.00 0.00 4.00
3887 4844 8.759481 TGTATGAGAATGGGCATTATAAACAA 57.241 30.769 0.00 0.00 0.00 2.83
3888 4845 9.365906 TGTATGAGAATGGGCATTATAAACAAT 57.634 29.630 0.00 0.00 0.00 2.71
3917 4874 4.527427 GTCTACAGGTTGAACCCTAAGACT 59.473 45.833 22.87 0.00 40.42 3.24
3919 4876 2.372172 ACAGGTTGAACCCTAAGACTGG 59.628 50.000 11.41 0.00 39.75 4.00
3920 4877 1.351350 AGGTTGAACCCTAAGACTGGC 59.649 52.381 11.41 0.00 39.75 4.85
3921 4878 1.613520 GGTTGAACCCTAAGACTGGCC 60.614 57.143 2.08 0.00 30.04 5.36
3926 4883 2.287977 ACCCTAAGACTGGCCAAAAC 57.712 50.000 7.01 0.54 0.00 2.43
3929 4886 1.271163 CCTAAGACTGGCCAAAACCGA 60.271 52.381 7.01 0.00 0.00 4.69
4005 4962 7.437748 TCAGCTAATCTAGGTAGAAAATGCTC 58.562 38.462 5.77 0.00 35.69 4.26
4054 5017 2.808202 GCACTGGGTCATGAATCGCTAT 60.808 50.000 0.00 0.00 0.00 2.97
4056 5019 4.631131 CACTGGGTCATGAATCGCTATAA 58.369 43.478 0.00 0.00 0.00 0.98
4058 5021 3.997021 CTGGGTCATGAATCGCTATAACC 59.003 47.826 0.00 0.00 0.00 2.85
4059 5022 3.389656 TGGGTCATGAATCGCTATAACCA 59.610 43.478 0.00 0.00 0.00 3.67
4060 5023 4.141597 TGGGTCATGAATCGCTATAACCAA 60.142 41.667 0.00 0.00 0.00 3.67
4116 5123 9.729281 ATGACAACATGCATGATATCTTATACA 57.271 29.630 32.75 15.10 35.21 2.29
4272 5280 8.995027 TTGATTTATATACCTCCAAACTGCAT 57.005 30.769 0.00 0.00 0.00 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 1.806542 TGTAGTCGTCGTTAGGTGGTC 59.193 52.381 0.00 0.00 0.00 4.02
22 23 5.696260 TGCTTCATTATTTGTAGTCGTCG 57.304 39.130 0.00 0.00 0.00 5.12
23 24 5.960105 GCTTGCTTCATTATTTGTAGTCGTC 59.040 40.000 0.00 0.00 0.00 4.20
24 25 5.163754 GGCTTGCTTCATTATTTGTAGTCGT 60.164 40.000 0.00 0.00 0.00 4.34
25 26 5.266242 GGCTTGCTTCATTATTTGTAGTCG 58.734 41.667 0.00 0.00 0.00 4.18
37 38 1.808945 CACTTCTTCGGCTTGCTTCAT 59.191 47.619 0.00 0.00 0.00 2.57
79 80 7.389607 TGTTTACTATAAGGTTTGCTCAACTCC 59.610 37.037 0.24 0.00 35.46 3.85
80 81 8.319143 TGTTTACTATAAGGTTTGCTCAACTC 57.681 34.615 0.24 0.00 35.46 3.01
96 97 8.873830 CATGACGATTTTCTGACTGTTTACTAT 58.126 33.333 0.00 0.00 0.00 2.12
127 128 2.371841 TGGTGTGCTGGTCTGTTAGATT 59.628 45.455 0.00 0.00 0.00 2.40
133 134 0.748005 GTTGTGGTGTGCTGGTCTGT 60.748 55.000 0.00 0.00 0.00 3.41
140 141 0.732571 CGTCTTTGTTGTGGTGTGCT 59.267 50.000 0.00 0.00 0.00 4.40
142 143 2.514902 CAACGTCTTTGTTGTGGTGTG 58.485 47.619 0.00 0.00 43.28 3.82
143 144 2.911819 CAACGTCTTTGTTGTGGTGT 57.088 45.000 0.00 0.00 43.28 4.16
166 167 5.861787 CCACCCGCTCTTTTATTTTTGTTAG 59.138 40.000 0.00 0.00 0.00 2.34
179 180 2.527951 GATGTGCTCCACCCGCTCTT 62.528 60.000 0.00 0.00 32.73 2.85
191 192 1.565759 TGATGGCCTTTAGGATGTGCT 59.434 47.619 3.32 0.00 37.39 4.40
200 201 0.830648 CCGTCCTCTGATGGCCTTTA 59.169 55.000 3.32 0.00 40.71 1.85
212 216 4.208686 CTACAGCCCGCCGTCCTC 62.209 72.222 0.00 0.00 0.00 3.71
221 225 1.170290 AACAACAACGCCTACAGCCC 61.170 55.000 0.00 0.00 38.78 5.19
223 227 0.661020 ACAACAACAACGCCTACAGC 59.339 50.000 0.00 0.00 38.52 4.40
514 518 2.267426 GTTTGTGCCGCTGTTCTTTTT 58.733 42.857 0.00 0.00 0.00 1.94
515 519 1.797348 CGTTTGTGCCGCTGTTCTTTT 60.797 47.619 0.00 0.00 0.00 2.27
516 520 0.248458 CGTTTGTGCCGCTGTTCTTT 60.248 50.000 0.00 0.00 0.00 2.52
517 521 1.355210 CGTTTGTGCCGCTGTTCTT 59.645 52.632 0.00 0.00 0.00 2.52
518 522 2.542907 CCGTTTGTGCCGCTGTTCT 61.543 57.895 0.00 0.00 0.00 3.01
519 523 2.051345 CCGTTTGTGCCGCTGTTC 60.051 61.111 0.00 0.00 0.00 3.18
520 524 3.591835 CCCGTTTGTGCCGCTGTT 61.592 61.111 0.00 0.00 0.00 3.16
521 525 4.555709 TCCCGTTTGTGCCGCTGT 62.556 61.111 0.00 0.00 0.00 4.40
522 526 3.726517 CTCCCGTTTGTGCCGCTG 61.727 66.667 0.00 0.00 0.00 5.18
525 529 2.162338 TACTCCTCCCGTTTGTGCCG 62.162 60.000 0.00 0.00 0.00 5.69
526 530 0.035739 TTACTCCTCCCGTTTGTGCC 59.964 55.000 0.00 0.00 0.00 5.01
527 531 1.534163 GTTTACTCCTCCCGTTTGTGC 59.466 52.381 0.00 0.00 0.00 4.57
528 532 2.148768 GGTTTACTCCTCCCGTTTGTG 58.851 52.381 0.00 0.00 0.00 3.33
529 533 2.052468 AGGTTTACTCCTCCCGTTTGT 58.948 47.619 0.00 0.00 31.32 2.83
530 534 2.853235 AGGTTTACTCCTCCCGTTTG 57.147 50.000 0.00 0.00 31.32 2.93
531 535 4.382362 CGATTAGGTTTACTCCTCCCGTTT 60.382 45.833 0.00 0.00 38.86 3.60
532 536 3.131755 CGATTAGGTTTACTCCTCCCGTT 59.868 47.826 0.00 0.00 38.86 4.44
533 537 2.692041 CGATTAGGTTTACTCCTCCCGT 59.308 50.000 0.00 0.00 38.86 5.28
534 538 2.692041 ACGATTAGGTTTACTCCTCCCG 59.308 50.000 0.00 0.00 38.86 5.14
549 553 5.105716 GGCATCTCTAGCATCCTAACGATTA 60.106 44.000 0.00 0.00 0.00 1.75
555 559 3.266477 AGGGCATCTCTAGCATCCTAA 57.734 47.619 0.00 0.00 0.00 2.69
556 560 3.266477 AAGGGCATCTCTAGCATCCTA 57.734 47.619 0.00 0.00 0.00 2.94
560 564 6.439636 TTGTATTAAGGGCATCTCTAGCAT 57.560 37.500 0.00 0.00 0.00 3.79
581 585 7.870270 TGACTCTATCACCAGGAATAGCCTTG 61.870 46.154 0.00 0.00 37.36 3.61
592 596 7.504403 ACCTGATTAATTGACTCTATCACCAG 58.496 38.462 0.00 0.00 36.92 4.00
601 605 9.099454 AGAATTACGAACCTGATTAATTGACTC 57.901 33.333 0.00 0.00 0.00 3.36
602 606 8.883731 CAGAATTACGAACCTGATTAATTGACT 58.116 33.333 0.00 0.00 0.00 3.41
612 616 2.736144 ACGCAGAATTACGAACCTGA 57.264 45.000 0.00 0.00 0.00 3.86
620 624 9.525409 TTTCCTTATAGTAGAACGCAGAATTAC 57.475 33.333 0.00 0.00 0.00 1.89
623 627 8.880750 GTTTTTCCTTATAGTAGAACGCAGAAT 58.119 33.333 0.00 0.00 0.00 2.40
625 629 7.380536 TGTTTTTCCTTATAGTAGAACGCAGA 58.619 34.615 0.00 0.00 0.00 4.26
626 630 7.591006 TGTTTTTCCTTATAGTAGAACGCAG 57.409 36.000 0.00 0.00 0.00 5.18
627 631 7.966246 TTGTTTTTCCTTATAGTAGAACGCA 57.034 32.000 0.00 0.00 0.00 5.24
628 632 9.274065 CAATTGTTTTTCCTTATAGTAGAACGC 57.726 33.333 0.00 0.00 0.00 4.84
632 636 9.932207 TCGACAATTGTTTTTCCTTATAGTAGA 57.068 29.630 13.36 0.00 0.00 2.59
642 646 7.477144 AAAATCCTTCGACAATTGTTTTTCC 57.523 32.000 13.36 0.00 0.00 3.13
671 675 3.266772 TCTGTAGGCCATCCAACTCAATT 59.733 43.478 5.01 0.00 33.74 2.32
673 677 2.265367 TCTGTAGGCCATCCAACTCAA 58.735 47.619 5.01 0.00 33.74 3.02
674 678 1.951209 TCTGTAGGCCATCCAACTCA 58.049 50.000 5.01 0.00 33.74 3.41
675 679 2.486191 CCATCTGTAGGCCATCCAACTC 60.486 54.545 5.01 0.00 33.74 3.01
676 680 1.492176 CCATCTGTAGGCCATCCAACT 59.508 52.381 5.01 0.00 33.74 3.16
677 681 1.477558 CCCATCTGTAGGCCATCCAAC 60.478 57.143 5.01 0.00 33.74 3.77
678 682 0.846015 CCCATCTGTAGGCCATCCAA 59.154 55.000 5.01 0.00 33.74 3.53
679 683 0.030195 TCCCATCTGTAGGCCATCCA 60.030 55.000 5.01 0.00 33.74 3.41
680 684 1.140312 TTCCCATCTGTAGGCCATCC 58.860 55.000 5.01 0.00 0.00 3.51
681 685 1.541233 CGTTCCCATCTGTAGGCCATC 60.541 57.143 5.01 0.00 0.00 3.51
682 686 0.469917 CGTTCCCATCTGTAGGCCAT 59.530 55.000 5.01 0.00 0.00 4.40
683 687 1.904771 CGTTCCCATCTGTAGGCCA 59.095 57.895 5.01 0.00 0.00 5.36
684 688 1.523938 GCGTTCCCATCTGTAGGCC 60.524 63.158 0.00 0.00 0.00 5.19
685 689 1.883084 CGCGTTCCCATCTGTAGGC 60.883 63.158 0.00 0.00 0.00 3.93
686 690 1.227263 CCGCGTTCCCATCTGTAGG 60.227 63.158 4.92 0.00 0.00 3.18
687 691 1.883084 GCCGCGTTCCCATCTGTAG 60.883 63.158 4.92 0.00 0.00 2.74
688 692 2.185867 GCCGCGTTCCCATCTGTA 59.814 61.111 4.92 0.00 0.00 2.74
703 707 4.176851 GTCTCCTCGTCGTCCGCC 62.177 72.222 0.00 0.00 36.19 6.13
704 708 4.517703 CGTCTCCTCGTCGTCCGC 62.518 72.222 0.00 0.00 36.19 5.54
705 709 2.800581 CTCGTCTCCTCGTCGTCCG 61.801 68.421 0.00 0.00 38.13 4.79
706 710 3.091529 CTCGTCTCCTCGTCGTCC 58.908 66.667 0.00 0.00 0.00 4.79
707 711 2.400402 GCTCGTCTCCTCGTCGTC 59.600 66.667 0.00 0.00 0.00 4.20
708 712 3.126225 GGCTCGTCTCCTCGTCGT 61.126 66.667 0.00 0.00 0.00 4.34
709 713 4.225340 CGGCTCGTCTCCTCGTCG 62.225 72.222 0.00 0.00 0.00 5.12
710 714 2.818714 TCGGCTCGTCTCCTCGTC 60.819 66.667 0.00 0.00 0.00 4.20
711 715 3.126225 GTCGGCTCGTCTCCTCGT 61.126 66.667 0.00 0.00 0.00 4.18
712 716 3.125573 TGTCGGCTCGTCTCCTCG 61.126 66.667 0.00 0.00 0.00 4.63
713 717 1.658686 ATGTGTCGGCTCGTCTCCTC 61.659 60.000 0.00 0.00 0.00 3.71
714 718 1.251527 AATGTGTCGGCTCGTCTCCT 61.252 55.000 0.00 0.00 0.00 3.69
715 719 0.389948 AAATGTGTCGGCTCGTCTCC 60.390 55.000 0.00 0.00 0.00 3.71
716 720 0.992802 GAAATGTGTCGGCTCGTCTC 59.007 55.000 0.00 0.00 0.00 3.36
717 721 0.317160 TGAAATGTGTCGGCTCGTCT 59.683 50.000 0.00 0.00 0.00 4.18
718 722 0.716108 CTGAAATGTGTCGGCTCGTC 59.284 55.000 0.00 0.00 0.00 4.20
719 723 0.317160 TCTGAAATGTGTCGGCTCGT 59.683 50.000 0.00 0.00 0.00 4.18
720 724 0.716108 GTCTGAAATGTGTCGGCTCG 59.284 55.000 0.00 0.00 0.00 5.03
721 725 0.716108 CGTCTGAAATGTGTCGGCTC 59.284 55.000 0.00 0.00 0.00 4.70
722 726 1.291877 GCGTCTGAAATGTGTCGGCT 61.292 55.000 0.00 0.00 0.00 5.52
723 727 1.132640 GCGTCTGAAATGTGTCGGC 59.867 57.895 0.00 0.00 0.00 5.54
724 728 0.865111 TTGCGTCTGAAATGTGTCGG 59.135 50.000 0.00 0.00 0.00 4.79
725 729 2.880822 ATTGCGTCTGAAATGTGTCG 57.119 45.000 0.00 0.00 0.00 4.35
726 730 4.148696 CCAAAATTGCGTCTGAAATGTGTC 59.851 41.667 0.00 0.00 0.00 3.67
727 731 4.050553 CCAAAATTGCGTCTGAAATGTGT 58.949 39.130 0.00 0.00 0.00 3.72
728 732 4.148696 GTCCAAAATTGCGTCTGAAATGTG 59.851 41.667 0.00 0.00 0.00 3.21
729 733 4.298332 GTCCAAAATTGCGTCTGAAATGT 58.702 39.130 0.00 0.00 0.00 2.71
730 734 3.674753 GGTCCAAAATTGCGTCTGAAATG 59.325 43.478 0.00 0.00 0.00 2.32
731 735 3.611530 CGGTCCAAAATTGCGTCTGAAAT 60.612 43.478 0.00 0.00 0.00 2.17
732 736 2.287308 CGGTCCAAAATTGCGTCTGAAA 60.287 45.455 0.00 0.00 0.00 2.69
733 737 1.265635 CGGTCCAAAATTGCGTCTGAA 59.734 47.619 0.00 0.00 0.00 3.02
734 738 0.871722 CGGTCCAAAATTGCGTCTGA 59.128 50.000 0.00 0.00 0.00 3.27
735 739 0.871722 TCGGTCCAAAATTGCGTCTG 59.128 50.000 0.00 0.00 0.00 3.51
736 740 1.600023 TTCGGTCCAAAATTGCGTCT 58.400 45.000 0.00 0.00 0.00 4.18
737 741 2.409152 TTTCGGTCCAAAATTGCGTC 57.591 45.000 0.00 0.00 0.00 5.19
738 742 2.873133 TTTTCGGTCCAAAATTGCGT 57.127 40.000 0.00 0.00 0.00 5.24
739 743 3.312828 TCATTTTCGGTCCAAAATTGCG 58.687 40.909 8.46 0.00 34.37 4.85
740 744 4.306600 ACTCATTTTCGGTCCAAAATTGC 58.693 39.130 8.46 0.00 34.37 3.56
741 745 4.616802 CGACTCATTTTCGGTCCAAAATTG 59.383 41.667 8.46 1.45 34.37 2.32
742 746 4.794169 CGACTCATTTTCGGTCCAAAATT 58.206 39.130 8.46 0.00 34.37 1.82
743 747 4.419522 CGACTCATTTTCGGTCCAAAAT 57.580 40.909 6.32 6.32 36.57 1.82
744 748 3.889196 CGACTCATTTTCGGTCCAAAA 57.111 42.857 0.00 0.00 32.66 2.44
752 756 2.020016 CGCGCCGACTCATTTTCG 59.980 61.111 0.00 0.00 36.20 3.46
753 757 1.429148 ATCCGCGCCGACTCATTTTC 61.429 55.000 0.00 0.00 0.00 2.29
754 758 1.449601 ATCCGCGCCGACTCATTTT 60.450 52.632 0.00 0.00 0.00 1.82
755 759 2.173669 CATCCGCGCCGACTCATTT 61.174 57.895 0.00 0.00 0.00 2.32
756 760 2.586079 CATCCGCGCCGACTCATT 60.586 61.111 0.00 0.00 0.00 2.57
769 773 4.899239 CTCGTCCGCCTGGCATCC 62.899 72.222 20.29 3.92 34.14 3.51
770 774 2.650813 ATTCTCGTCCGCCTGGCATC 62.651 60.000 20.29 7.06 34.14 3.91
771 775 2.257409 AATTCTCGTCCGCCTGGCAT 62.257 55.000 20.29 0.00 34.14 4.40
772 776 2.954684 AATTCTCGTCCGCCTGGCA 61.955 57.895 20.29 0.00 34.14 4.92
773 777 2.125106 AATTCTCGTCCGCCTGGC 60.125 61.111 9.11 9.11 34.14 4.85
774 778 1.815421 CCAATTCTCGTCCGCCTGG 60.815 63.158 0.00 0.00 0.00 4.45
775 779 0.179073 ATCCAATTCTCGTCCGCCTG 60.179 55.000 0.00 0.00 0.00 4.85
776 780 0.541863 AATCCAATTCTCGTCCGCCT 59.458 50.000 0.00 0.00 0.00 5.52
777 781 1.064060 CAAATCCAATTCTCGTCCGCC 59.936 52.381 0.00 0.00 0.00 6.13
778 782 1.064060 CCAAATCCAATTCTCGTCCGC 59.936 52.381 0.00 0.00 0.00 5.54
779 783 1.670811 CCCAAATCCAATTCTCGTCCG 59.329 52.381 0.00 0.00 0.00 4.79
780 784 2.683362 GACCCAAATCCAATTCTCGTCC 59.317 50.000 0.00 0.00 0.00 4.79
781 785 2.351726 CGACCCAAATCCAATTCTCGTC 59.648 50.000 0.00 0.00 0.00 4.20
782 786 2.356135 CGACCCAAATCCAATTCTCGT 58.644 47.619 0.00 0.00 0.00 4.18
783 787 1.670811 CCGACCCAAATCCAATTCTCG 59.329 52.381 0.00 0.00 0.00 4.04
784 788 1.405463 GCCGACCCAAATCCAATTCTC 59.595 52.381 0.00 0.00 0.00 2.87
785 789 1.474330 GCCGACCCAAATCCAATTCT 58.526 50.000 0.00 0.00 0.00 2.40
786 790 0.100503 CGCCGACCCAAATCCAATTC 59.899 55.000 0.00 0.00 0.00 2.17
787 791 1.944234 GCGCCGACCCAAATCCAATT 61.944 55.000 0.00 0.00 0.00 2.32
788 792 2.414785 GCGCCGACCCAAATCCAAT 61.415 57.895 0.00 0.00 0.00 3.16
789 793 3.059386 GCGCCGACCCAAATCCAA 61.059 61.111 0.00 0.00 0.00 3.53
792 796 3.428282 AACGCGCCGACCCAAATC 61.428 61.111 5.73 0.00 0.00 2.17
793 797 3.732892 CAACGCGCCGACCCAAAT 61.733 61.111 5.73 0.00 0.00 2.32
805 809 2.200337 AAAAGTGGAGGCCCAACGC 61.200 57.895 0.00 0.00 45.59 4.84
806 810 1.106944 ACAAAAGTGGAGGCCCAACG 61.107 55.000 0.00 0.00 45.59 4.10
807 811 0.673985 GACAAAAGTGGAGGCCCAAC 59.326 55.000 0.00 0.00 45.59 3.77
808 812 0.469144 GGACAAAAGTGGAGGCCCAA 60.469 55.000 0.00 0.00 45.59 4.12
809 813 1.152830 GGACAAAAGTGGAGGCCCA 59.847 57.895 0.00 0.00 40.95 5.36
810 814 1.971695 CGGACAAAAGTGGAGGCCC 60.972 63.158 0.00 0.00 0.00 5.80
811 815 2.626780 GCGGACAAAAGTGGAGGCC 61.627 63.158 0.00 0.00 0.00 5.19
812 816 2.954611 GCGGACAAAAGTGGAGGC 59.045 61.111 0.00 0.00 0.00 4.70
813 817 2.966309 GCGCGGACAAAAGTGGAGG 61.966 63.158 8.83 0.00 0.00 4.30
814 818 2.556287 GCGCGGACAAAAGTGGAG 59.444 61.111 8.83 0.00 0.00 3.86
815 819 2.975799 GGCGCGGACAAAAGTGGA 60.976 61.111 8.83 0.00 0.00 4.02
816 820 4.383602 CGGCGCGGACAAAAGTGG 62.384 66.667 9.72 0.00 0.00 4.00
817 821 3.342627 TCGGCGCGGACAAAAGTG 61.343 61.111 14.27 0.00 0.00 3.16
818 822 3.343421 GTCGGCGCGGACAAAAGT 61.343 61.111 34.74 0.00 36.91 2.66
819 823 4.084888 GGTCGGCGCGGACAAAAG 62.085 66.667 38.05 8.95 38.70 2.27
829 833 3.496131 CATCGGTTTGGGTCGGCG 61.496 66.667 0.00 0.00 0.00 6.46
830 834 3.810896 GCATCGGTTTGGGTCGGC 61.811 66.667 0.00 0.00 0.00 5.54
831 835 2.359354 TGCATCGGTTTGGGTCGG 60.359 61.111 0.00 0.00 0.00 4.79
832 836 1.375396 TCTGCATCGGTTTGGGTCG 60.375 57.895 0.00 0.00 0.00 4.79
833 837 0.605319 TGTCTGCATCGGTTTGGGTC 60.605 55.000 0.00 0.00 0.00 4.46
834 838 0.606401 CTGTCTGCATCGGTTTGGGT 60.606 55.000 0.00 0.00 0.00 4.51
835 839 0.321564 TCTGTCTGCATCGGTTTGGG 60.322 55.000 0.00 0.00 0.00 4.12
836 840 0.798776 GTCTGTCTGCATCGGTTTGG 59.201 55.000 0.00 0.00 0.00 3.28
837 841 1.511850 TGTCTGTCTGCATCGGTTTG 58.488 50.000 0.00 0.00 0.00 2.93
838 842 2.254546 TTGTCTGTCTGCATCGGTTT 57.745 45.000 0.00 0.00 0.00 3.27
839 843 2.254546 TTTGTCTGTCTGCATCGGTT 57.745 45.000 0.00 0.00 0.00 4.44
840 844 2.254546 TTTTGTCTGTCTGCATCGGT 57.745 45.000 0.00 0.00 0.00 4.69
841 845 2.159476 CCATTTTGTCTGTCTGCATCGG 60.159 50.000 0.00 0.00 0.00 4.18
842 846 2.159476 CCCATTTTGTCTGTCTGCATCG 60.159 50.000 0.00 0.00 0.00 3.84
843 847 2.821969 ACCCATTTTGTCTGTCTGCATC 59.178 45.455 0.00 0.00 0.00 3.91
844 848 2.821969 GACCCATTTTGTCTGTCTGCAT 59.178 45.455 0.00 0.00 0.00 3.96
845 849 2.229792 GACCCATTTTGTCTGTCTGCA 58.770 47.619 0.00 0.00 0.00 4.41
846 850 2.229792 TGACCCATTTTGTCTGTCTGC 58.770 47.619 0.00 0.00 33.83 4.26
847 851 3.441572 GGATGACCCATTTTGTCTGTCTG 59.558 47.826 0.00 0.00 33.83 3.51
848 852 3.690460 GGATGACCCATTTTGTCTGTCT 58.310 45.455 0.00 0.00 33.83 3.41
862 866 1.106285 GCAACTCCAATGGGATGACC 58.894 55.000 0.00 0.00 43.91 4.02
863 867 2.019984 GAGCAACTCCAATGGGATGAC 58.980 52.381 0.00 0.00 43.91 3.06
864 868 1.918262 AGAGCAACTCCAATGGGATGA 59.082 47.619 0.00 0.00 43.91 2.92
865 869 2.431954 AGAGCAACTCCAATGGGATG 57.568 50.000 0.00 0.00 43.91 3.51
866 870 3.372025 GGTTAGAGCAACTCCAATGGGAT 60.372 47.826 0.00 0.00 43.91 3.85
867 871 2.026262 GGTTAGAGCAACTCCAATGGGA 60.026 50.000 0.00 0.00 42.28 4.37
868 872 2.290896 TGGTTAGAGCAACTCCAATGGG 60.291 50.000 0.00 0.00 37.30 4.00
869 873 3.071874 TGGTTAGAGCAACTCCAATGG 57.928 47.619 0.00 0.00 37.30 3.16
870 874 4.576463 GGTATGGTTAGAGCAACTCCAATG 59.424 45.833 0.00 0.00 37.30 2.82
871 875 4.385310 GGGTATGGTTAGAGCAACTCCAAT 60.385 45.833 0.00 0.00 37.30 3.16
872 876 3.054655 GGGTATGGTTAGAGCAACTCCAA 60.055 47.826 0.00 0.00 37.30 3.53
873 877 2.504175 GGGTATGGTTAGAGCAACTCCA 59.496 50.000 0.00 0.00 37.30 3.86
874 878 2.504175 TGGGTATGGTTAGAGCAACTCC 59.496 50.000 0.00 0.00 37.30 3.85
875 879 3.055385 TGTGGGTATGGTTAGAGCAACTC 60.055 47.826 0.00 0.00 37.30 3.01
876 880 2.910319 TGTGGGTATGGTTAGAGCAACT 59.090 45.455 0.00 0.00 37.30 3.16
877 881 3.343941 TGTGGGTATGGTTAGAGCAAC 57.656 47.619 0.00 0.00 36.32 4.17
878 882 3.371487 CCATGTGGGTATGGTTAGAGCAA 60.371 47.826 0.00 0.00 42.16 3.91
879 883 2.172505 CCATGTGGGTATGGTTAGAGCA 59.827 50.000 0.00 0.00 42.16 4.26
880 884 2.851195 CCATGTGGGTATGGTTAGAGC 58.149 52.381 0.00 0.00 42.16 4.09
911 915 0.759346 GTCCTATCCTGGCCAATCGT 59.241 55.000 7.01 0.00 0.00 3.73
912 916 0.758734 TGTCCTATCCTGGCCAATCG 59.241 55.000 7.01 0.00 0.00 3.34
947 951 0.654683 GAGCGCTGATTGTGATGGAC 59.345 55.000 18.48 0.00 0.00 4.02
962 966 1.243902 GTGGAGGAGATAGGAGAGCG 58.756 60.000 0.00 0.00 0.00 5.03
1090 1094 1.813513 CTGGAAAACGACAGCAGGAT 58.186 50.000 0.00 0.00 0.00 3.24
1113 1117 2.016393 TAGCCGCCGTTGATCTCCTG 62.016 60.000 0.00 0.00 0.00 3.86
1134 1138 2.646175 CGTGGAGAGGCGGAGGAAA 61.646 63.158 0.00 0.00 0.00 3.13
1240 1244 1.923204 CGACAGGATGCTTCTTCTTCG 59.077 52.381 0.00 0.00 42.53 3.79
1304 1308 0.249398 AATCCACCGTTCCGAAGAGG 59.751 55.000 1.95 1.95 42.97 3.69
1317 1321 1.372087 CTGCGGGCTCAAGAATCCAC 61.372 60.000 0.00 0.00 0.00 4.02
1364 1368 9.477484 ACTACTTATTACGGATGATCATTTGTC 57.523 33.333 10.14 0.00 0.00 3.18
1381 1385 7.270047 TGTTAATTCCTGCGCTACTACTTATT 58.730 34.615 9.73 0.60 0.00 1.40
1498 1588 2.260481 GGGAGAACAAGAATCGACGAC 58.740 52.381 0.00 0.00 0.00 4.34
1762 1883 1.346722 GTTCCCGTCCTTCTTCTCCAA 59.653 52.381 0.00 0.00 0.00 3.53
1794 1915 0.603707 CGTTGGTGCTGTCCATGTCT 60.604 55.000 0.00 0.00 37.33 3.41
1941 2063 1.068402 CGCATTGAATCAAGTGTGCCA 60.068 47.619 12.66 0.00 0.00 4.92
1946 2068 4.083324 AGTGTAACCGCATTGAATCAAGTG 60.083 41.667 1.10 1.96 37.80 3.16
1947 2069 4.072131 AGTGTAACCGCATTGAATCAAGT 58.928 39.130 1.10 0.00 37.80 3.16
1948 2070 4.437390 GGAGTGTAACCGCATTGAATCAAG 60.437 45.833 1.10 0.00 37.80 3.02
1949 2071 3.438781 GGAGTGTAACCGCATTGAATCAA 59.561 43.478 0.00 0.00 37.80 2.57
1950 2072 3.006940 GGAGTGTAACCGCATTGAATCA 58.993 45.455 0.00 0.00 37.80 2.57
1951 2073 3.006940 TGGAGTGTAACCGCATTGAATC 58.993 45.455 0.00 0.00 37.80 2.52
2040 2164 5.106830 GGTACCACTGAACTTAATTTGACGG 60.107 44.000 7.15 0.00 0.00 4.79
2144 2268 9.755122 ATTGTTAAAATATAGAATAGGGGAGCC 57.245 33.333 0.00 0.00 0.00 4.70
2206 2335 5.064558 TCATTCAACATTGCTTGCCAAAAT 58.935 33.333 0.00 0.00 36.92 1.82
2212 2346 5.407387 ACTCAAATCATTCAACATTGCTTGC 59.593 36.000 0.00 0.00 0.00 4.01
2263 2402 4.095483 CAGTCAGTTCAAATGGCTACATCC 59.905 45.833 0.00 0.00 35.94 3.51
2371 2510 5.528690 TGTGGTTTTTCTGAAGAGAGTGATG 59.471 40.000 0.00 0.00 0.00 3.07
2383 3190 4.555511 GCTCTGCTTAGTGTGGTTTTTCTG 60.556 45.833 0.00 0.00 0.00 3.02
2442 3250 2.667418 CTGTGCTGGGAGGGACAG 59.333 66.667 2.16 2.16 45.92 3.51
2444 3252 2.985456 CTCTGTGCTGGGAGGGAC 59.015 66.667 0.00 0.00 0.00 4.46
2470 3278 0.385751 TCTGTATCTGCTGCTACCGC 59.614 55.000 0.00 0.00 0.00 5.68
2498 3306 2.291741 GGTTGATTGCATCTTCCCGATC 59.708 50.000 0.00 0.00 0.00 3.69
2517 3325 9.790297 ATACACTCTTTCCTCATATATATGGGT 57.210 33.333 19.16 3.55 32.21 4.51
2526 3334 8.851145 GTGATAGTCATACACTCTTTCCTCATA 58.149 37.037 0.00 0.00 36.43 2.15
2527 3335 7.563188 AGTGATAGTCATACACTCTTTCCTCAT 59.437 37.037 0.00 0.00 40.19 2.90
2528 3336 6.892456 AGTGATAGTCATACACTCTTTCCTCA 59.108 38.462 0.00 0.00 40.19 3.86
2529 3337 7.341445 AGTGATAGTCATACACTCTTTCCTC 57.659 40.000 0.00 0.00 40.19 3.71
2530 3338 7.726033 AAGTGATAGTCATACACTCTTTCCT 57.274 36.000 0.00 0.00 42.81 3.36
2531 3339 8.467598 TGTAAGTGATAGTCATACACTCTTTCC 58.532 37.037 0.00 0.00 42.81 3.13
2532 3340 9.291664 GTGTAAGTGATAGTCATACACTCTTTC 57.708 37.037 12.93 0.00 42.81 2.62
2533 3341 8.251721 GGTGTAAGTGATAGTCATACACTCTTT 58.748 37.037 16.88 0.00 40.25 2.52
2534 3342 7.396339 TGGTGTAAGTGATAGTCATACACTCTT 59.604 37.037 16.88 4.57 40.25 2.85
2535 3343 6.890268 TGGTGTAAGTGATAGTCATACACTCT 59.110 38.462 16.88 0.00 40.25 3.24
2536 3344 7.096884 TGGTGTAAGTGATAGTCATACACTC 57.903 40.000 16.88 11.14 40.25 3.51
2537 3345 6.405953 GCTGGTGTAAGTGATAGTCATACACT 60.406 42.308 16.88 0.00 40.25 3.55
2538 3346 5.749109 GCTGGTGTAAGTGATAGTCATACAC 59.251 44.000 12.23 12.23 39.93 2.90
2539 3347 5.449999 CGCTGGTGTAAGTGATAGTCATACA 60.450 44.000 0.00 0.00 0.00 2.29
2540 3348 4.976731 CGCTGGTGTAAGTGATAGTCATAC 59.023 45.833 0.00 0.00 0.00 2.39
2545 3353 2.176889 ACCGCTGGTGTAAGTGATAGT 58.823 47.619 0.00 0.00 32.98 2.12
2554 3362 0.250510 TGATTGCAACCGCTGGTGTA 60.251 50.000 0.00 0.00 39.64 2.90
2556 3364 1.210931 CTGATTGCAACCGCTGGTG 59.789 57.895 0.00 0.00 39.64 4.17
2601 3420 2.239907 GAGGAGAGGCTACATTGGGTTT 59.760 50.000 0.00 0.00 0.00 3.27
2608 3427 0.757188 CGGTGGAGGAGAGGCTACAT 60.757 60.000 0.00 0.00 0.00 2.29
2612 3431 2.043450 CTCGGTGGAGGAGAGGCT 60.043 66.667 0.00 0.00 36.61 4.58
2655 3474 2.307098 CAGTTCATCTCCTTTCCCTGGT 59.693 50.000 0.00 0.00 0.00 4.00
2658 3477 4.171234 TCTTCAGTTCATCTCCTTTCCCT 58.829 43.478 0.00 0.00 0.00 4.20
2666 3485 4.183101 CCTGAGCTTCTTCAGTTCATCTC 58.817 47.826 0.00 0.00 41.53 2.75
2681 3500 1.001503 CAGACCTCCTCCCTGAGCT 59.998 63.158 0.00 0.00 0.00 4.09
2682 3501 2.063378 CCAGACCTCCTCCCTGAGC 61.063 68.421 0.00 0.00 0.00 4.26
2692 3511 2.544726 CGGAAGCAAACCAGACCTC 58.455 57.895 0.00 0.00 0.00 3.85
2693 3512 4.800554 CGGAAGCAAACCAGACCT 57.199 55.556 0.00 0.00 0.00 3.85
2712 3531 3.502211 CGCTCTCTCTCCCTTCTCTTATC 59.498 52.174 0.00 0.00 0.00 1.75
2725 3544 1.603172 CCACGAAAACACGCTCTCTCT 60.603 52.381 0.00 0.00 36.70 3.10
2734 3553 0.604511 ACCGGGATCCACGAAAACAC 60.605 55.000 20.20 0.00 0.00 3.32
2757 3576 1.873591 CACTCACCAACTTCCTTTCCG 59.126 52.381 0.00 0.00 0.00 4.30
2766 3585 4.558226 TGATAATCAGCACTCACCAACT 57.442 40.909 0.00 0.00 0.00 3.16
2768 3587 4.019411 TCCTTGATAATCAGCACTCACCAA 60.019 41.667 0.00 0.00 0.00 3.67
2772 3591 4.033009 TCCTCCTTGATAATCAGCACTCA 58.967 43.478 0.00 0.00 0.00 3.41
2775 3594 4.775236 ACTTCCTCCTTGATAATCAGCAC 58.225 43.478 0.00 0.00 0.00 4.40
2778 3597 5.012561 CCCCTACTTCCTCCTTGATAATCAG 59.987 48.000 0.00 0.00 0.00 2.90
2797 3616 0.397254 GCTCTCCAGCAGTACCCCTA 60.397 60.000 0.00 0.00 46.06 3.53
2798 3617 1.687493 GCTCTCCAGCAGTACCCCT 60.687 63.158 0.00 0.00 46.06 4.79
2799 3618 2.904131 GCTCTCCAGCAGTACCCC 59.096 66.667 0.00 0.00 46.06 4.95
2845 3687 2.031333 GTGGAAGTGTCTAGTTCGACGT 60.031 50.000 0.00 0.00 35.96 4.34
2989 3892 0.309922 CACTTGCCAGCACAGTCTTG 59.690 55.000 0.00 0.00 0.00 3.02
2990 3893 1.450531 GCACTTGCCAGCACAGTCTT 61.451 55.000 0.00 0.00 34.31 3.01
3022 3925 7.543359 TTTGAAAGGTAAGGTACACTAGCTA 57.457 36.000 5.81 0.00 35.05 3.32
3052 3955 1.062440 TGATGCGCTATTTTGCACTCG 59.938 47.619 9.73 0.00 45.07 4.18
3053 3956 2.830772 TGATGCGCTATTTTGCACTC 57.169 45.000 9.73 0.00 45.07 3.51
3079 3982 0.102120 CCTGAGACGGAGACTGCATC 59.898 60.000 0.00 0.00 29.49 3.91
3163 4066 5.048782 TGTGAATAACATGTTCCTTGAGCAC 60.049 40.000 15.85 14.07 32.36 4.40
3177 4080 3.375610 AGCGTGTGTTTGTGTGAATAACA 59.624 39.130 0.00 0.00 36.04 2.41
3180 4083 5.736486 TTTAGCGTGTGTTTGTGTGAATA 57.264 34.783 0.00 0.00 0.00 1.75
3186 4089 4.086327 CGTGAAATTTAGCGTGTGTTTGTG 60.086 41.667 0.00 0.00 0.00 3.33
3217 4120 5.936956 GCAAAAATTGTATGGGTTGGATCAA 59.063 36.000 0.00 0.00 0.00 2.57
3223 4126 5.008415 TGCTTTGCAAAAATTGTATGGGTTG 59.992 36.000 13.84 0.00 34.76 3.77
3266 4169 4.633565 GGCATCTCCTTTACTTCTGTCAAG 59.366 45.833 0.00 0.00 0.00 3.02
3271 4209 6.599244 TGTATTTGGCATCTCCTTTACTTCTG 59.401 38.462 0.00 0.00 35.26 3.02
3283 4221 3.424703 ACACAGCTTGTATTTGGCATCT 58.575 40.909 0.00 0.00 36.32 2.90
3305 4243 5.903764 TGAATTGCTTGAAATGTTTTCCG 57.096 34.783 0.00 0.00 0.00 4.30
3327 4265 6.238759 GCCAGTCTGACACTAGTTTTGAAAAT 60.239 38.462 10.88 0.00 32.21 1.82
3387 4328 9.507329 TTTCTTCTTTGTCAGCTCTGTTATAAT 57.493 29.630 0.00 0.00 0.00 1.28
3432 4373 5.133941 TCCTCTGTAGAGCGTTTAGATCAT 58.866 41.667 3.34 0.00 40.75 2.45
3453 4394 4.404715 TCCCATAGTGTAGCTGTTACTTCC 59.595 45.833 0.00 0.00 33.23 3.46
3454 4395 5.593679 TCCCATAGTGTAGCTGTTACTTC 57.406 43.478 0.00 0.00 33.23 3.01
3469 4410 4.217118 GCTGGCAATTGTTAGATCCCATAG 59.783 45.833 7.40 0.00 0.00 2.23
3470 4411 4.144297 GCTGGCAATTGTTAGATCCCATA 58.856 43.478 7.40 0.00 0.00 2.74
3471 4412 2.961062 GCTGGCAATTGTTAGATCCCAT 59.039 45.455 7.40 0.00 0.00 4.00
3472 4413 2.378038 GCTGGCAATTGTTAGATCCCA 58.622 47.619 7.40 3.06 0.00 4.37
3473 4414 1.334869 CGCTGGCAATTGTTAGATCCC 59.665 52.381 7.40 0.00 0.00 3.85
3474 4415 1.268743 GCGCTGGCAATTGTTAGATCC 60.269 52.381 7.40 0.00 39.62 3.36
3475 4416 2.111041 GCGCTGGCAATTGTTAGATC 57.889 50.000 7.40 0.00 39.62 2.75
3486 4427 2.132517 CACATTTCTGTGCGCTGGCA 62.133 55.000 9.73 4.23 45.79 4.92
3496 4437 1.538512 CACACTGGGCTCACATTTCTG 59.461 52.381 0.00 0.00 0.00 3.02
3512 4453 9.036980 ACCTATCCTATGAACCTTATATCACAC 57.963 37.037 0.00 0.00 0.00 3.82
3521 4462 9.261035 CTGTGATATACCTATCCTATGAACCTT 57.739 37.037 0.00 0.00 34.03 3.50
3555 4496 3.416156 ACATCTCTTTCCCTGCAAGTTC 58.584 45.455 0.00 0.00 0.00 3.01
3569 4510 5.424573 TCTCATTTCCTGTGATGACATCTCT 59.575 40.000 16.25 0.00 0.00 3.10
3580 4521 3.881089 TGCATGCTATCTCATTTCCTGTG 59.119 43.478 20.33 0.00 0.00 3.66
3581 4522 4.160642 TGCATGCTATCTCATTTCCTGT 57.839 40.909 20.33 0.00 0.00 4.00
3596 4537 3.593096 TCATAGGATTCGAGATGCATGC 58.407 45.455 11.82 11.82 0.00 4.06
3645 4586 8.150945 CAGGAAAATAAGCATTAGCCTAGACTA 58.849 37.037 0.00 0.00 43.56 2.59
3712 4669 3.201045 ACCTCTTAGGCCTCATTTCCTTC 59.799 47.826 9.68 0.00 39.63 3.46
3736 4693 4.776837 TCATAACAATCCCATTTGTTGCCT 59.223 37.500 11.66 0.00 46.43 4.75
3804 4761 6.925165 CCATGCATTGTTTATAACCCATTCTC 59.075 38.462 0.00 0.00 0.00 2.87
3805 4762 6.383726 ACCATGCATTGTTTATAACCCATTCT 59.616 34.615 0.00 0.00 0.00 2.40
3806 4763 6.581712 ACCATGCATTGTTTATAACCCATTC 58.418 36.000 0.00 0.00 0.00 2.67
3807 4764 6.383726 AGACCATGCATTGTTTATAACCCATT 59.616 34.615 4.71 0.00 0.00 3.16
3808 4765 5.898972 AGACCATGCATTGTTTATAACCCAT 59.101 36.000 4.71 0.00 0.00 4.00
3809 4766 5.268387 AGACCATGCATTGTTTATAACCCA 58.732 37.500 4.71 0.00 0.00 4.51
3810 4767 5.852282 AGACCATGCATTGTTTATAACCC 57.148 39.130 4.71 0.00 0.00 4.11
3811 4768 7.328277 TGTAGACCATGCATTGTTTATAACC 57.672 36.000 4.71 0.00 0.00 2.85
3812 4769 7.067008 ACCTGTAGACCATGCATTGTTTATAAC 59.933 37.037 4.71 0.00 0.00 1.89
3813 4770 7.116075 ACCTGTAGACCATGCATTGTTTATAA 58.884 34.615 4.71 0.00 0.00 0.98
3814 4771 6.658849 ACCTGTAGACCATGCATTGTTTATA 58.341 36.000 4.71 1.75 0.00 0.98
3815 4772 5.509498 ACCTGTAGACCATGCATTGTTTAT 58.491 37.500 4.71 0.00 0.00 1.40
3816 4773 4.917385 ACCTGTAGACCATGCATTGTTTA 58.083 39.130 4.71 0.92 0.00 2.01
3817 4774 3.766545 ACCTGTAGACCATGCATTGTTT 58.233 40.909 4.71 1.95 0.00 2.83
3818 4775 3.439857 ACCTGTAGACCATGCATTGTT 57.560 42.857 4.71 0.00 0.00 2.83
3819 4776 3.084039 CAACCTGTAGACCATGCATTGT 58.916 45.455 2.50 2.50 0.00 2.71
3820 4777 3.346315 TCAACCTGTAGACCATGCATTG 58.654 45.455 0.00 0.00 0.00 2.82
3821 4778 3.719268 TCAACCTGTAGACCATGCATT 57.281 42.857 0.00 0.00 0.00 3.56
3822 4779 3.347216 GTTCAACCTGTAGACCATGCAT 58.653 45.455 0.00 0.00 0.00 3.96
3823 4780 2.552155 GGTTCAACCTGTAGACCATGCA 60.552 50.000 0.00 0.00 34.73 3.96
3824 4781 2.084546 GGTTCAACCTGTAGACCATGC 58.915 52.381 0.00 0.00 34.73 4.06
3825 4782 2.305927 AGGGTTCAACCTGTAGACCATG 59.694 50.000 6.51 0.00 40.04 3.66
3826 4783 2.632537 AGGGTTCAACCTGTAGACCAT 58.367 47.619 6.51 0.00 40.04 3.55
3827 4784 2.112279 AGGGTTCAACCTGTAGACCA 57.888 50.000 6.51 0.00 40.04 4.02
3828 4785 3.836562 TCTTAGGGTTCAACCTGTAGACC 59.163 47.826 6.51 0.00 42.02 3.85
3829 4786 4.527427 AGTCTTAGGGTTCAACCTGTAGAC 59.473 45.833 19.43 19.43 44.94 2.59
3830 4787 4.527038 CAGTCTTAGGGTTCAACCTGTAGA 59.473 45.833 6.51 3.89 42.02 2.59
3831 4788 4.322801 CCAGTCTTAGGGTTCAACCTGTAG 60.323 50.000 6.51 1.44 42.02 2.74
3832 4789 3.581332 CCAGTCTTAGGGTTCAACCTGTA 59.419 47.826 6.51 0.00 42.02 2.74
3833 4790 2.372172 CCAGTCTTAGGGTTCAACCTGT 59.628 50.000 6.51 0.00 42.02 4.00
3834 4791 2.876079 GCCAGTCTTAGGGTTCAACCTG 60.876 54.545 6.51 0.00 42.02 4.00
3835 4792 1.351350 GCCAGTCTTAGGGTTCAACCT 59.649 52.381 6.51 0.00 44.75 3.50
3836 4793 1.613520 GGCCAGTCTTAGGGTTCAACC 60.614 57.143 0.00 0.00 37.60 3.77
3837 4794 1.073284 TGGCCAGTCTTAGGGTTCAAC 59.927 52.381 0.00 0.00 0.00 3.18
3838 4795 1.440618 TGGCCAGTCTTAGGGTTCAA 58.559 50.000 0.00 0.00 0.00 2.69
3839 4796 1.440618 TTGGCCAGTCTTAGGGTTCA 58.559 50.000 5.11 0.00 0.00 3.18
3840 4797 2.557056 GTTTTGGCCAGTCTTAGGGTTC 59.443 50.000 5.11 0.00 0.00 3.62
3841 4798 2.177016 AGTTTTGGCCAGTCTTAGGGTT 59.823 45.455 5.11 0.00 0.00 4.11
3842 4799 1.780919 AGTTTTGGCCAGTCTTAGGGT 59.219 47.619 5.11 0.00 0.00 4.34
3843 4800 2.162681 CAGTTTTGGCCAGTCTTAGGG 58.837 52.381 5.11 0.00 0.00 3.53
3844 4801 2.863809 ACAGTTTTGGCCAGTCTTAGG 58.136 47.619 5.11 0.00 0.00 2.69
3845 4802 5.245531 TCATACAGTTTTGGCCAGTCTTAG 58.754 41.667 5.11 0.00 0.00 2.18
3846 4803 5.012664 TCTCATACAGTTTTGGCCAGTCTTA 59.987 40.000 5.11 0.00 0.00 2.10
3847 4804 4.074970 CTCATACAGTTTTGGCCAGTCTT 58.925 43.478 5.11 0.00 0.00 3.01
3848 4805 3.327757 TCTCATACAGTTTTGGCCAGTCT 59.672 43.478 5.11 2.82 0.00 3.24
3849 4806 3.674997 TCTCATACAGTTTTGGCCAGTC 58.325 45.455 5.11 0.11 0.00 3.51
3850 4807 3.788227 TCTCATACAGTTTTGGCCAGT 57.212 42.857 5.11 2.01 0.00 4.00
3851 4808 4.142315 CCATTCTCATACAGTTTTGGCCAG 60.142 45.833 5.11 0.00 0.00 4.85
3852 4809 3.763360 CCATTCTCATACAGTTTTGGCCA 59.237 43.478 0.00 0.00 0.00 5.36
3853 4810 3.131046 CCCATTCTCATACAGTTTTGGCC 59.869 47.826 0.00 0.00 0.00 5.36
3854 4811 3.429410 GCCCATTCTCATACAGTTTTGGC 60.429 47.826 0.00 0.00 0.00 4.52
3855 4812 3.763360 TGCCCATTCTCATACAGTTTTGG 59.237 43.478 0.00 0.00 0.00 3.28
3856 4813 5.587388 ATGCCCATTCTCATACAGTTTTG 57.413 39.130 0.00 0.00 0.00 2.44
3857 4814 7.902920 ATAATGCCCATTCTCATACAGTTTT 57.097 32.000 0.00 0.00 32.50 2.43
3858 4815 8.995027 TTATAATGCCCATTCTCATACAGTTT 57.005 30.769 0.00 0.00 32.50 2.66
3859 4816 8.850156 GTTTATAATGCCCATTCTCATACAGTT 58.150 33.333 0.00 0.00 32.50 3.16
3860 4817 7.998383 TGTTTATAATGCCCATTCTCATACAGT 59.002 33.333 0.00 0.00 32.50 3.55
3861 4818 8.394971 TGTTTATAATGCCCATTCTCATACAG 57.605 34.615 0.00 0.00 32.50 2.74
3862 4819 8.759481 TTGTTTATAATGCCCATTCTCATACA 57.241 30.769 0.00 0.00 32.50 2.29
3863 4820 9.630098 CATTGTTTATAATGCCCATTCTCATAC 57.370 33.333 0.00 0.00 31.96 2.39
3887 4844 3.347216 GTTCAACCTGTAGACCATGCAT 58.653 45.455 0.00 0.00 0.00 3.96
3888 4845 2.552155 GGTTCAACCTGTAGACCATGCA 60.552 50.000 0.00 0.00 34.73 3.96
3896 4853 4.322801 CCAGTCTTAGGGTTCAACCTGTAG 60.323 50.000 6.51 1.44 42.02 2.74
3917 4874 1.365633 GTGCATTCGGTTTTGGCCA 59.634 52.632 0.00 0.00 0.00 5.36
3919 4876 0.037419 ATGGTGCATTCGGTTTTGGC 60.037 50.000 0.00 0.00 0.00 4.52
3920 4877 3.584406 TTATGGTGCATTCGGTTTTGG 57.416 42.857 0.00 0.00 0.00 3.28
3921 4878 4.143137 GCTTTTATGGTGCATTCGGTTTTG 60.143 41.667 0.00 0.00 0.00 2.44
3926 4883 2.937469 TGCTTTTATGGTGCATTCGG 57.063 45.000 0.00 0.00 0.00 4.30
3929 4886 4.276058 AGCTTTGCTTTTATGGTGCATT 57.724 36.364 0.00 0.00 33.89 3.56
3982 4939 7.610580 AGAGCATTTTCTACCTAGATTAGCT 57.389 36.000 0.00 0.00 32.86 3.32
4005 4962 3.392882 CTTTGGCCTTTTGGTGCTTTAG 58.607 45.455 3.32 0.00 42.99 1.85
4088 5059 6.570672 AAGATATCATGCATGTTGTCATCC 57.429 37.500 26.59 11.19 31.15 3.51
4116 5123 9.146586 AGATTAGTGATCTCTCTGCTAGAAATT 57.853 33.333 0.00 0.00 41.31 1.82
4126 5133 3.320541 CCGCCAAGATTAGTGATCTCTCT 59.679 47.826 0.00 0.00 44.41 3.10
4194 5202 2.189594 TCATGCTTCTGTTCCTGTGG 57.810 50.000 0.00 0.00 0.00 4.17
4200 5208 6.026513 GCTTTGTAGATTCATGCTTCTGTTC 58.973 40.000 7.31 0.95 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.