>input_sequence_35208
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-------------------------------------------AGCCTCTCCACCTGAGCAACACAAGAATTTTATCCGC
TTAACTGCTGCCCGTCGCAAATGGAGGCAGCGGCAGCAGCGGCTAGCTCCTCTATCCTGCTGTCGTTTTCCAGCCCCAGG
AGATCAACGGCGGCTACTTTCCTCCGCCTCTCCACGGCGTCGCCTCGCATCACGTGCTCCGCCACACAGCAGCTTCCCCT
CGCTGCACCATGGTTGTTAACCGCCGAAAAGAGCAGCACTAGACGAAGAAGAAGCATCCTGTCGTTGAGGTGCTCCTCCG
CCGCCGCCGGCAGCCCGTCGGCCGTCGCCTCTTCGGAACGGTGGATTCTTGAGCCCGCAGGTCCGTCTCTCTCCCTGTCT
AACAATTGACAAATGATCATCCGTAA------------------------------------------------------
-------------------------------TAAGTAGTAGCGCAGGAATTAA-CATCGCCGCTGGTTTCAGGAGACGGC
GACTGGAAACACATCGGCTACCGCGTCGCCCGGCCCGGCGCCATCGAGATCGCCTCAGTACGCGCTCGTCGTC-------
-----GATTCTTGTTCTCCCGTTCATGCTGATCATGTACATTTTGCAACAAAAAATACAAAAGTGTTGGTGATGGTAAGC
ATGACAGGCATCTTGTTCATCTCAGGAAGCGATGACCGTGGGACGAGTTCCGGAGAACGCCG----------CCCCGTCG
CGACAGGTGATCGATCTCTTCTCTTGGGTGTTTCGTTTTAGTCAAGGCGTCTGGTTCGCTGGTGATCTGAGAGTCTCTGA
GCTGC------TG---CTGCAGTTTCTGGGGTGCACGCTCGGTTGGAGAAGAAGGACGGGAACCTGGTGGTCACAGACAT
GGACAGCACCAACGGCACCTACGTCAACGAGAGGAAGCTGGTGCCGGGATTCCCGGTTGCCGTCCAACCCGGGAGCCTCC
TCATCTTTGGTACTATACTGTACCT-CCCTTTGCGTTCACTTCTCACTATTGATCAAAATGCTGGCACACTTG--ATTCA
ATGCGGTTACACTCCATGCTTACTTAATCCTCTCGGTTAAAATGCTGGCATACTCTTTCAACCAAAATGCCTCCCCGATT
AAACCGTCAAATTAAGTTCAGTGGTACCCCTAAAATTTCTCCTCCCTATCTCAAAAACCCAGGACTCTCCAAATAAGATT
CTGCACTAAAATTTGTTCAATTCTAGTGGCTCCCCTATTCTATATTTTAACAATATGTTGTA-----GATTGCTGTGATG
GCAAACAATTTTTTA-----TTTTGGCAAGCAATG-----TTGAATGATTTGAGTTGGAGTGAAGCACAATAAGCCGTTG
GGGATGTAGCCATTTGAACTGACTGTAACCGCTTCAAATGGTAGTTATAGGAATACAGTCACAAGCAACAACAAACAATA
AGAAACCGGTACATATATCAAGCAAATTCCATCACT--------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------CTCTTCAGAAAAACCA
CACTAAGCAGAGCAATGAGTTTTATCCTCCCTGCAAACACACAT-CCCCCTGTCCCTCCCAGCACAGAGCAGAGCACGCG
GTAGCAGCAGATACAGATAATTAGCGATCGGGAAGATGCAATCAACCCATATATATGAGGAAAGAGTGTATGACTATCAC
TTACACCAGCGGTTGCAATCAGCCCAAATC-----------GCAGCAAACAGGCATAACAAACCCAATGTAGCCTCTCCT
CCACCGAGCCCTTTCTCTCAATCTCACCGCCGCACCAGGGAAAGGAGATGAACTGAAGAAGCTCAGGGAGGAGGTCTGGT
TTGCTTCCGCGATAAGAGAAGGGAGAGAGAGCGTGTTTTCGTGGATCCCGGTAAACGGAAAGGAAGTTGGTGAGTGCTGA
TTATCAAGGAGGAAGTAGGGGTACTGCTGGAGAGCG-----------------------TTGTGCACTTCTAGCAGAGTT
TTTTGCACGTCGAACTA------------------------------GACACTTCCACTGCACTACGTG-----------
--------------------CTTTTGACGAATTGCTTCTGTCGCAGGTGACATCCACTTGGCAATGTTTCGGGTGAGGAA
GACAATCGTCGATGTGCCAGCCGAGGCCACCAAAGATGACCAGCAGGAAGCCAAGACTGTGCTGGCAAGTGCAGTTCAAG
AAACTAGCTAGTGTACCTTACCTTTCAAAATAAGCGAGTGCAAAATAGCGCATCATGGTAAGATGCAGTCTCCGTCTCAG
GATCGACGAAATATGTAGCTAGGCAGAAATAGCATGTACGAGTAAAGAGTAACTTGCAACATGTCGTGCTCAAGGAACAT
GTTATTCACACAAACACACGCTAAATTTCACGCCAAAGCTTGATCCAACCCATACAATTTTTGCAAAGCATAGGCAGACT
GTTTCTGCC-----------------------------------TTGACA------------------------------
--------------------------------------------------------------------------------
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>chr4D_1_TraesCS4D01G122800
GTAATAAATATGGACCACCTAACGACGACTACAAATAATGAAGCAAGCCGAAGAAGTGCCATCATTGCCCTCCCTCATTG
GAGTTGAGCAAACCTTATAGTAAACAGTCAGAAAATCGTCATGTTAAAATCTAACAGACCAGCACACCACAACAAAGACG
TTGAACCTAACAAAAATAAAAGAGCGGGTGGAGCACATCCT---AAAGGCCATCAGAGGACGGCGGGCTGTAGGCGTTGT
TGTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGTGTATTCGAGAAAAAAGAACAGCGGCACAAACGGGAGGAGTAAACCTAATCGTT
AGGATGCTAGAGATGCCCTTAATACAAGGCTATTCCTGGTGATAGAGTCAATTAATCAGGTTCGTAATTCTGCGTTCTAC
TATAAGGAAAAACAATTGTCGAAGGATTTTTTTTAATTGAGTTGGATGGCCTACAGATGGGAACGCGGCGGACGACGAGG
AGACGAGCCGACACATTTCAGACGCAATTTTGGACCGAAAATGAGTCGGCGCGGATGCCAGGCGGACGAGAATTGGATTT
GGGTCGGCGCGTTGGGCCTCCACTTTTGTCCGCGCCGACCCAAACCGATGCAGACAGACAAAATGGGTCATCCCATTGGA
GTTGCTCTAACCATACCCACATGGTAGCAAGCACACGATTGGCCAGGATAGGACATTTGGACACCTGCCAGTCCATCACA
ATCAGCGCTCTCCTATCTCCTCCACCCTCCCTAAGGAGGACACAGCCTCTCCACCTGAGCAACACAAGAATTTTATCCGC
TTAACTGCTGCCCGTCGCAAATGGAGGCAGCGGCAGCAGCGGCTAGCTCCTCTATCCTGCTGTCGTTTTCCAGCCCCAGG
AGATCAACGGCGGCTACTTTCCTCCGCCTCTCCACGGCGTCGCCTCGCATCACGTGCTCCGCCACACAGCAGCTTCCCCT
CGCTGCACCATGGTTGTTAACCGCCGAAAAGAGCAGCACTAGACGAAGAAGAAGCATCCTGTCGTTGAGGTGCTCCTCCG
CCGCCGCCGGCAGCCCGTCGGCCGTCGCCTCTTCGGAACGGTGGATTCTTGAGCCCGCAGGTCCGTCTCTCTCCCTGTCT
AACAATTGACAAATGATCATCCGTAA------------------------------------------------------
-------------------------------TAAGTAGTAGCGCAGGAATTAA-CATCGCCGCTGGTTTCAGGAGACGGC
GACTGGAAACACATCGGCTACCGCGTCGCCCGGCCCGGCGCCATCGAGATCGCCTCAGTACGCGCTCGTCGTC-------
-----GATTCTTGTTCTCCCGTTCATGCTGATCATGTACATTTTGCAACAAAAAATACAAAAGTGTTGGTGATGGTAAGC
ATGACAGGCATCTTGTTCATCTCAGGAAGCGATGACCGTGGGACGAGTTCCGGAGAACGCCG----------CCCCGTCG
CGACAGGTGATCGATCTCTTCTCTTGGGTGTTTCGTTTTAGTCAAGGCGTCTGGTTCGCTGGTGATCTGAGAGTCTCTGA
GCTGC------TG---CTGCAGTTTCTGGGGTGCACGCTCGGTTGGAGAAGAAGGACGGGAACCTGGTGGTCACAGACAT
GGACAGCACCAACGGCACCTACGTCAACGAGAGGAAGCTGGTGCCGGGATTCCCGGTTGCCGTCCAACCCGGGAGCCTCC
TCATCTTTGGTACTATACTGTACCT-CCCTTTGCGTTCACTTCTCACTATTGATCAAAATGCTGGCACACTTG--ATTCA
ATGCGGTTACACTCCATGCTTACTTAATCCTCTCGGTTAAAATGCTGGCATACTCTTTCAACCAAAATGCCTCCCCGATT
AAACCGTCAAATTAAGTTCAGTGGTACCCCTAAAATTTCTCCTCCCTATCTCAAAAACCCAGGACTCTCCAAATAAGATT
CTGCACTAAAATTTGTTCAATTCTAGTGGCTCCCCTATTCTATATTTTAACAATATGTTGTA-----GATTGCTGTGATG
GCAAACAATTTTTTA-----TTTTGGCAAGCAATG-----TTGAATGATTTGAGTTGGAGTGAAGCACAATAAGCCGTTG
GGGATGTAGCCATTTGAACTGACTGTAACCGCTTCAAATGGTAGTTATAGGAATACAGTCACAAGCAACAACAAACAATA
AGAAACCGGTACATATATCAAGCAAATTCCATCACT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------CTCTTCAGAAAAACCA
CACTAAGCAGAGCAATGAGTTTTATCCTCCCTGCAAACACACAT-CCCCCTGTCCCTCCCAGCACAGAGCAGAGCACGCG
GTAGCAGCAGATACAGATAATTAGCGATCGGGAAGATGCAATCAACCCATATATATGAGGAAAGAGTGTATGACTATCAC
TTACACCAGCGGTTGCAATCAGCCCAAATC-----------GCAGCAAACAGGCATAACAAACCCAATGTAGCCTCTCCT
CCACCGAGCCCTTTCTCTCAATCTCACCGCCGCACCAGGGAAAGGAGATGAACTGAAGAAGCTCAGGGAGGAGGTCTGGT
TTGCTTCCGCGATAAGAGAAGGGAGAGAGAGCGTGTTTTCGTGGATCCCGGTAAACGGAAAGGAAGTTGGTGAGTGCTGA
TTATCAAGGAGGAAGTAGGGGTACTGCTGGAGAGCG-----------------------TTGTGCACTTCTAGCAGAGTT
TTTTGCACGTCGAACTA------------------------------GACACTTCCACTGCACTACGTG-----------
--------------------CTTTTGACGAATTGCTTCTGTCGCAGGTGACATCCACTTGGCAATGTTTCGGGTGAGGAA
GACAATCGTCGATGTGCCAGCCGAGGCCACCAAAGATGACCAGCAGGAAGCCAAGACTGTGCTGGCAAGTGCAGTTCAAG
AAACTAGCTAGTGTACCTTACCTTTCAAAATAAGCGAGTGCAAAATAGCGCATCATGGTAAGATGCAGTCTCCGTCTCAG
GATCGACGAAATATGTAGCTAGGCAGAAATAGCATGTACGAGTAAAGAGTAACTTGCAACATGTCGTGCTCAAGGAACAT
GTTATTCACACAAACACACGCTAAATTTCACGCCAAAGCTTGATCCAACCCATACAATTTTTGCAAAGCATAGGCAGACT
GTTTCTGCC-----------------------------------TTGACAGAAGTAAAGGAGATGCCAAATACAAGCTGT
GTCGGAAAACATTTCAAGCAATTCATTTTCAAAACTAGTGTCAGACTGGCATTATA---AACAACACGTAATCTACAGAT
AAAATAGATTATAACAGAGCTGACAAAGAAGAAAATGCTGGTCAGCTCTTCAATGATCTAAACGCTCTACAGAGGAAGTA
ACAGCTACACTATGGGATCTAACAATTGCCAGCGCACAGAAATGTGAGCCCAGTGTGATATAAGGTTCATAGGATAGGTA
TATCACAGGAATAGAGAACTTGCAGGGAAAGAGATGTCATCACAGGAAATGAGATAGCATGCATCTCGAATCCTATGATT
AGGAATAGGAAATAATATTTTCCATTAGTCTAGGCTAATGCTTATTTTCCTGTGAAATAATTCCTG--------------
--TATATTCCTACAAACCAAAGGGCTCTGAAGGAAATGAGGCCTAAGAGGTAAGGCAACAAATGGGATTGTTATGATTGG
TTTCTCTCCACAGAGATGAAGTAACAATCAACTACTGTATGAGAATGGGTTATAAACAATGCATGGTCTACAGGTTGAAC
CCTAAGACTGGCCAAAACTGTATGAGAATGGGCATTATAAACAATGCATGGTCTACAGGTTGAACCCTAAGACTGGCCAA
AACCGAATGCACCATAAAAGCAAAGCTACCCAAGAGACATGAGGAAATGCTGACCCTCAGCTAATCTAGGTAGAAAATGC
TCTAAAGCACCAAAAGGCCAAAGCACAAGGC------ACTGGGTCATGAATCGCTATAACCAA--------GAAAGATAT
ACATCATATTAGCATCAAGGATGACAACA---TGCATGATATCTTA---------------------------------T
ACAATTTCTAGCAGAGAGATCACTAATCTTGGCGGTGGATACAGATAAATAGCAGAACCAAACTA-TAAGAAACTGTAAG
ACCACAGGAACAGAAGCATGAATCTACAAAGCTACTAGCAGCCTAGGGGCATGTTTGATTTATATACCTCCAAACTGCAT
>chr4A_1
GTAATAAATATGAACCACCTAAGAT-GACTACAAATAGTGAAGCAAGCCGAAGACGTGCCATCATCGCCCTCCCTCATTT
AAGTTGAGCAAACCTTTTAGTAAACAGTCAGAAAATCGTCATGTTAAGATCTAGCAGACCGGTGCACCACAACAAAGACG
TTGAACTTAACAAAAATAAGAGAGCGGGTGGGGCACATCCCAAAAAAGGCCATCAAAGGACGGCAGCATGGAT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GGGAGGAGTAAACCCAATCGCC
AGGGTGCTAGAGATACCCCTAATATAAGGCTATTCATGGTGATA--GTCAATTAACCAGGTTCTAATTCTA-------AC
TATAATGAAAAACAATTGTCGACGGATTTTTTTTTAAATGAGG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TAACCATACCCACATGGTAGCAAGCAC--GATTGGCCAGGATAGGACATTTGGACACTTGCCAATCCATCACA
ATCAGAGCTCTCCTATCTCCTCCACCTCCCGTGAGGAGGAGACAGCCTCTCCACCTGAGCAACACAAGAATTTTATCCGC
TTAACTGCTGCCCGTCGCAAATGGAGGCAGCGGCAGCAGCGGCTAGCTCCTCTGTCCTGCTGTCATTTTCCAGCCCGGGG
AGATCAACGGCGGCTACCTTCCTCCGCCTCTCCACGGCGTCGCCTCGCATCACATGCTCCGCCACACAGCAGCTTCCCCT
CGCTGCGCCATGGTTGTTAACCTCCGACAAGAGCAGCAGC---AGAAGAAGAAGCATCTTGTCGCTGAGGTGCTCCTCCG
CTTCCACCGGCAGCCCGTCGGCCGTCGTCTCTTCGGAACGATGGATTCTTGAGCCCGCAGGTCCGTCTCTCTCCCTGTCT
GAC-ATTAACAAATGACCATCCGTGA------------------------------------------------------
-------------------------------TAAGTAGCGCATGAATTATCGAGCATCGCCGCTGGTTTCAGGAGACGGC
GACTGGAAACACATCGGCTACCGCGTCGCTCGGCCCGGCGCCATGGAGATCGCCTCCGTACGTGCTCTTCGTC-------
-----GATTCCTGTTCTCCCGTTCGTGCTGATCATGTACATTTTGCAACAAAAAATACAAAAGTGTTGGTGATGGTAAGC
ATGACAGGCGTCCTGTTCATCTCAGGAAGCGATAACCGTGGGACGAGTTCCGGAGAACGCCGACGTCGTCATCCCCGTCG
CGACAGGTGATCGATCTCTTCTCTTGGGTGTTTCGTTTTAGTCAAGGCGTCTGGTTTGCTGGTGATCTGAGAGTCTCTGA
GCTGCCGCTGCTG---CTGCAGTTTCTGGGGTGCACGCTCGGCTGGAGAAGAAGGACGGGAACCTGGTGGTCACGGACAT
GGACAGCACCAACGGCACCTACGTCAACGAGAGGAAGCTGGTGCCCGGATTCCCGGTTGCCGTCCAACCCGGGAGCCTCC
TCATCTTCGGTACTA--------CTCCCCTTTGCGTTCACTTCTCACTATTGATCAAAATGCCGGCAGCACACTTATTCA
GTGCGGTTACACTCCATGCTTACTTAATCCTCTCAGTTAAAATGCTGGCATACTCTTTCAACCAAAATGCCTCCCCGATT
AAATCGTCAAATAAAGTTCAGTGGTACCCCTAAAATTTCTCCTCCCTATCTCAAAAACCCAGGACTCTCCTAGTAAGATT
CAGAACAAAAATTTGTTCAATTCTAGTAGTTCCCCTATTCTATATTTTAACAATATGTTGTACAGTAGATTGCTGTGATG
GAAAACATTTTTTTTATATTTTTTGCCAAGCAATGAAAAATTGAATAAATTGAGTTGGAGTGAAGCACAATAAGCCGTTG
CAGATGTAGCCATTTGAACTGACTGTAACCGCTTCAAATGGTAGTTATAGGAATACAGTCACAAGCAACAACAAACAATA
AGAAACCGGTACATATATCAAGCAAATTCTATCACTTTCACTTTTTTCTCGAAACGGAGGTAAAAGATTTGCCTCATCTA
TTAAATAAGGAGAGTTAGGCCTCTTTTGATTCATAGGATAGGATTAGGAATTTTATAGGAAACGAGATGTCATTTGGTTG
ACACCAAAGGAATTTTTTCATTGAGTCTAGCCTCATTTTTATTTTCCTATGAAATGTGAAGGATATGAACCAATCCTATG
TAGGAATAGGAATCTATTCCTATGAACCAAAGGACTCTAAAGGAAAAAAATCCTATAAGAATCCTATCCTCTAAAATTCC
TATAAAATTCCTTCAAACCAAAGGAGGCCTAGAGTTTTACATAACCCCCTACACACAAGCCGCATGAAACTTGCTCGCAC
AAAATTACAGTCCAAGTTTCTTTGCGCCAGGAGAAACCAATAACTTTGCTTCTTCAAGAATGGATCTAAGAACAGGTGGT
GGAGCAAAGTTTTGACGAAACACTCTAGCTTTCCGCTCGTTCCAAACGGTCCACAAGATAAGCATGGTGAGGAAGGCCAT
GGCATGTCAGTTTGGCTGTCTGTTATTGGTTTTTTTGCCCCACCGCTCATTGACAGATTCATCAAGATGCCACCCAGAGG
TGTTGATCTGAGCTAGCCCAAGCTTCTCGATGATAGATATCCTAAGCGTGTGCCGACACTTTCTCTCTTTAGAAAAACCA
CACTAAGCAGAGCAATGAGTTTTATCCTCCCTGCAAACACACAT-CCCCTT-TCCCTCCCAGCACAGAGCAGAGCACACG
GTAGCAGCAGATACAGATAATTAGCAATTGGTTAGATGCAATTAGCCCTTATA---------------TATGGCTATCAC
TAAGACCAGCGGTTGCAGTCAGCACAAATCGCTAACTATCAGCAGCAAACAGGCATAACTAACCCACCGTGGCCTCTCCT
CCACCGAGCCCTTTCTGTCAATCTCACCGCCGCCCCGGGGAAAGAAGATGAACTGAAGACACTCAGGGAGCGGGTCGGGT
TTGCTTCCGCAATAAGAGAAGGGGGAGAGAGCATGTTTTCATGGAGCCCGGTAAATGGAAAGGAGGCTGGGGAATGTTGA
TTATCAAGGAGGAAG---CGGAACTGCTGGAGATCA-----------------------TTGTGCACTTCTAGCAGAGTT
TTTTGCTCGTCGAACTA------------------------------GACATTTTCACTGCACTACGTGCATTTGAGTTT
GACACTTTCACTACACTACTCTTTTGACGAATTGCTTCTATCTCAGGTGACATCCACTTGGCAATGTTTCGGGTGAGGAA
GGAGATTGTCGATGTGCCAGCCAAGGCCACCAAAGATGACCAGCAGGAATCTGAGACTGTGCTGGCAAGTGCAGTTCAAG
AAACAAGCTAGTGTACCTTACCTTTCAAAATAAGG--GTGCAAAATAGTGCATCATGGTAATATACAGTCTCCGTCTCTG
GATCGACAAAATATGTAGCTAGGCAGAAATAGCTTGCGAGTA--------------------------------------
----------------------------------------------AACCCATACAATTTTTGCAAAGCATAGGCAGATT
GTTTCTGCTTTATCAATGTCCAACAACCATGGAATGGCAAACGGGACAGAGCC---------------AATACAAGCTGT
GTTGGAAAGCATTTCAAGCAATTCGTTTTCAAAACTAGTGTCAGACTGGCATTATA---AACA---CGTAATCTACAGAT
AAAATAGGTTATAACAGAGCTGACAAAGAAGGAAATGCTGGTCAGCTCTTCAGTGATCTAAATGCTCT------------
--------------------------------------GAAATGTGAGCCCGCTATAATATCAGGTTCATAGAATAGGTA
TATCACAGGAATACAAAACTTGCAGGGAATGAGATGCCATTGCAGGAGATGAGATGACATGTATCTCAAATCCTATGATT
AGGAATAGGAAATAATATTTTCCATGAGTCTAGGCTAATGCTTATTTTCCTGTGAAATAATTCCTGTCTATGAATAGGAA
TGTATATTCCTACAAACCAAAGGGCTCTAAAGGAAATGAGGCCTAAGAGGTAGGGCAACAAATGGGATTGTTAGGATTGG
TTTCTCTCCACACAGATGAAGTAACACTCAACTACTGTATC---------------------------------------
------------------------AGAATGG-------------------------------------------------
--------GCACCATAAAAGCAAACCTACCGAAGAGACACGAGGAAATGCTGACCCTTTGCTAATCTAGGTAGAAAATGC
TTTAAAGCACCAAAAGGCCAAAGCACAAGGCGCATAAACTGGGTCATGAATCGCCGAATCACCATAACTGGGAAAGATAT
ACATCATATTAGCATCAATGATGACAACAACATGCATGATATCTTA---------------------------------T
ACGATTTCTAGCGGACAGATCACTAATCTTGGCGGTGGATACAGATAAATAGCAGAACCAAACTATTAAGAAACTGTAAG
ATCACAGCAACAGAAGCATGAATCTACAAAGCTACTAGCAGCCTAGGGGCATGTTTGATTTATATACCTCCAAACTGC--
>chr4B_885
--------------------------------------------------------------------------------
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-------TAACCATACCCACATGGTAGCAAGCAC--GATTGGCCAGGATAGGACATTTGGACACCTGCCAATCCATCACA
ATCAGAGCTCTCCTATCTCCTCCACCCTCCGTGGGGAGGACACAGCCTCTCCACCTGAGCAACACAAGAATTTTATCCGC
TTAACTGCTGCCCGTCGCAAATGGAGGCAGCGGCAGCAGCGGCTAGTTCCTCTGTCCTGCTGTCGTTTTCCAGCCCGAGG
AGATCAACGGCGGCTACCTTCCTCCGCCTCTCCACGGCGTCGCCTCGCATCACGTGCTCCGCCACACAGCAGCTTCCCCT
CGCTGCACCATGGTTGTCAGCCGCCGAAAAGAGCAGCACTAGAAGAAGAAGCAGCATCCTGTCGTTAAGGTGCTCCTCGG
CCGCCACCGGCAGCCCGTCGGCCGTTGTCTCTTCAGAACGATGGATTCTTGAGCCCGCAGGTCCGTCTCTCTCCCTGTCC
AACAATTCACAAATGATCATCCTCCATCTCAAAATAAGTGTCTCAACTTTGTATTAATTCTAATACAAAGTTGTATTAAG
CTTAAGACATTTATTTTGGAAGCAGAGGAAGTAAGTAGTAGCGCCGGAATTAA-CATCGCCGCTGGTTTCAGGGGACGGC
GACTGGAAACACATCGGCTACCGCGTCGCCCGCCCCGGCGCCATCGAGATCGCATCCGTACGTGCTCTTCGTCGTCGCGA
CAAACGACTCTTGTTCCCCCGTTCATGCTGATCCTGTACATTT-GCAACGAAAAATAAAAGGCTGTTGGTGACGGCAAGC
ATGACAGGCATCTTGTTCATCTCAGGAAGCGATGACCGTGGGACGAGTTCCGGAGAACGCCGACGTCGTCATCCCCGTCG
CAACAGGTGATCCATCTCTTCTCTTGGGTGTTTCGTCTTAGTCAAGGCGTCTGGTTCGCTGGTGATCTGAGAGTCTCTGA
GCTGCTCCTGCTGCTGCTGCAGTTTCTGGGGTGCACGCTCGGCTGGAGAAGAAGGACGGGAACCTGGTGGTCACGGACAT
GGACAGCACCAACGGCACCTACGTCAACGAGAGGAAGCTGGTACCGGGATTCCCGGTCGCCGTCCAACCCGGGAGCCTCC
TCATCTTCGGTACTATACTGTACCTCCCTTTTGCGTTCACTTCTCACTATTGATCAAAATGCCGGCAGCACACTTACTCA
ATGCGGTTACACTCCATGCTTACTTAATCCTCTCGGTTAAAATGCTGGCATACTCTTTCGACCAAAATGCCTCCCCGATT
AAATCGTCAAATGAAGTTCAGTAGTACCCCTAAAATTTCTCCTCCCTATCTCAAAAACCCAGGACTCTCCAAATAAGATT
CAGCACTAAAATTTGTTCAATCCTAGTAGCTCCCCTATTCTATATTTTAACAATATATACGTTGC-AGGTTGCTGTGATG
AAAAACAATCTTTTGATATTTTGCG--AAGCAATGCAAAATTGAATGATATGATTTGGAGTGAAGCACAATAAGCCGTTG
GAGATGTAGCCATTTGAACTAACTGTGACCGCTTCAAATGTTAGTTATAGGAATACAGCCACAAGCAACAACAAACAATA
AGAAACCGGTACATATATCTAGCAAATTGTAT------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------CACTTTCTCCCTTTAGAAAAGGCA
CACTAAGCAGAGCAATTAAATTTATCCTCCCTGCAAGCACACACACCCCTA-TCCCTCCCAGCACAGAGCAGAGCACACG
GTAGCAGCAGATGCAGATAATTGGCAATCGGGAAGATGCAATCAGC----------------------------------
----ACCAGCTGTTGCAATCGGCCCAAATCGCCAACTATCAGCAGAAAACAGGCATAACTAACCCACTGTGGCCTCTCCT
TCACCGAGCCCTTTCTCTCAATCTAGG-----------------------------------------------------
--------------------------------------------------------------------------------
------AGGAAGTAG---GGGAATTGCTGGAGAGCGTTGTGCACTTCTAGCAGAGTTTGTTGTGCACTTCTAGCAGAGTT
TTTTGCTCGTCAAACTAAACTTTCACTGGACTACGTGCTTTTAAGTTGACACTTTCACTGCACTATGTG-----------
--------------------CTTTTGACGAATTGCTTCTGTCGCAGGTGACATCCACTTGGCAATGTTTCGGGTGAGGAA
GACAATCGTCGATGTGGCAGCCGAGGCCACCAAAGATGACCAGCAGGAAGCTGAGACTGTGCTGGCAAGTGCAGTTCAAG
AAACAAGCTAGTCTACCTTACCTTTCAAAATAAG--AGTGCAAAATAGTGCATCATGGTAATATGCAGTCCCCGTCTCAG
GATCAACGAAATATGTAGCTAGGCAGAAATAGCATGTACGAGTAAAGAGTAACTTGCAACATGTCATGCTCAAGGAACAG
GTCATTCAAACAAACACACGCTAAATTTCACGCCAAAGCCTGATCTGACCCATACAATTTTTGCAAAACATAGGCAGACT
GTTTCTGCTTTGTCAATGTCCAACGACCATGGAATGGCAAACCGTTGAGAGAAGTAAAGGCGATGCCA------------
----GAAAACATTTCAAACAATTCGTTTGCAAAACTAGCGTCAGACTGGCATCATAAACAACA---CGTAATCTACAGAT
GAAATAGGTTATAAAAGAGCTGACAAAGAAGGAAATGCTGGTCAGCTCTTCAGTGATCTAAACGCTCTACAGAC-AAGTA
ACAGCTACAAGGG----TCTAACAATAGCCAGCGCATAGAAATGTGAGTCCACTGTAATATCAGGTTCATAGGATAGGTA
TATCACAGGAATAGAAAACT-GCAGGGAATTAGATGTCATTGCAGGAAATGAGATAACATGTATCTCGAATCCTATGATT
AGGAATAGGAAATAATATTTTCCATGAGTCTAGGCTAATTCTTATTTTCCTGTGAAATAATTCCTGTCTATGAATAGAAT
TATATATTCCTACAAACCAAAGGGCTCTAAATGAAATGAGGCCTAAGAGGTATGGCAACAAATGGGATTGTTAGGATTGG
TTTCTCTCCACAGATG------AACAATCAACTACTGTATC---------------------------------------
------------------------AGAATGGACATTATAAACATCGCATGGT-TACAGGTTGAACCCTAAGACGGCT-AA
AATCGGATGCACCATAAAAGCAAAGCTGCCCAAGAGACGTGAGGAAATGCTGACCCTCTGCTACTCTAGGTAGAAAATGC
TTTAAAGCACCAAAAGGCCAAAGCGCAAGGCCCATAAACTGGGTCATGAATCGCTAAATCGCCATAACTGGGAAAGATAT
ACATCATATTAGCATCAATGATGACAACA---TCCATTCGAGGGACAAGCTTGGAACAAGCTTTTCCGGACGGAGGGAGT
ATGATTTCTAGCGCAGAGATCACTAATCTTGGCAGTGGATACAGATAAATAGCGGAACCAAAACTATAAGAAACTGTAAG
ATCACAGCAACAGAAGCATGAATCTACAAAGCTACTAGCAGCCTAGGGGCATGTTTGATTTATATACCTCCAAACTGCA-
>SNPs
------------S---------SSSS-----------S----------------S----------S-------------S
S---------------S------------------------------S-----S------S-SS----------------
------S------------S-----------S--------S--------------S--------S-SS--S-SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S-----SS
---S----------S---S-----S----------S--------SS---------S-------SS-S-SSSSSSSSSS--
-----S----------------S-----------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS---------------------------SS----------------------------------S---------
-----S------------------------S-S-----------------------------------------------
-----------------------------------------------------S----------------------S---
-----------------S--------------------------------------------------------------
-------------------------------------------S------------------------------------
-----S---------------------S------------S---------------------------------------
-------S----------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----S----S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------S-----
--------------------------------------------------------------------------------
-------S------------------------------------------------------S----SSSSSS-------
--------------------------------------------------------------------------------
---S--------S-------------------------------------------------------------------
-S-------------------------S----------------------------------------------------
-S------------S----------S------------------------------------------------------
-S------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------------------------------------S-S-------------------------S--
-------------------------S------------------S---S----SSSSSSSSSSSSSSS----S-------
-S-S-------------------------------------------------------S------S---S---------
---------------------------------S--S-------S--------------SS---------SS----S---
----------S------------S--------S-------S----S---------S--------S-S---S--S--S---
---------------SSS---S----------------------------------------------------------
------S-----------------------------------------------S-------------------------
--------------------------------------------------------------------------------
---------------------------------------------------SS---------------------------
----S-----------------------------SS------------S------------S------------------
-----------------------------------------------------------------S-------------S
--S-----S------------------------------S-----S----------------------------------
--------S---------------------------------------S-----------S-------------------
--S---------------------S--------------------------------------SSS--------------
-------S-----------------------S--------------------S--------------------SS-----
---------SSSSSSSS---------S---------S---------------S---S----S------------------
---------------S-------------S----------SS--------------S----S------------------
-------------------------S------------------------------------------------------
----------------------------S-----------------------S--------------------S------
----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS-------S-----------SS-------S--------------------S-SSS--
--S--S----------------------------------------------------S---------------------
-S------------------------------------------------------S-S-SSS-----------------
------------------S-------------------------------------------------------------
--S---------S-------------------------------------------------------------------
-S-----S-----------------------------------------------------------------------S
>forward_702
--------------------------------------------------------------------------------
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------------------------------------------TGGATGGCCTACAGATGGGA------------------
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>reverse_3362
--------------------------------------------------------------------------------
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-TACACCAGCGGTTGCAATCA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_809
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------GAATTGGATTT
GGGTCGGCG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3616
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---------------TAGGGGTACTGCTGGAGAGC---------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>forward_991
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CCTATCTCCTCCACCCTCCC-------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3617
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----------------AGGGGTACTGCTGGAGAGC---------------------------------------------
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>forward_3420
--------------------------------------------------------------------------------
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----------------------------------------CGCAGCAAACAGGCATAACA--------------------
--------------------------------------------------------------------------------
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>reverse_4876
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---------------------------------------------------------------------------GCCAA
AACCGAATGCACCAT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
