Multiple sequence alignment - TraesCS4D01G033800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G033800 chr4D 100.000 3537 0 0 1 3537 15452024 15448488 0.000000e+00 6532
1 TraesCS4D01G033800 chr4D 94.355 248 14 0 3245 3492 488271339 488271092 7.160000e-102 381
2 TraesCS4D01G033800 chr4D 94.024 251 13 2 3242 3491 101017615 101017864 2.580000e-101 379
3 TraesCS4D01G033800 chr4B 89.074 1199 58 23 1855 3020 25945786 25944628 0.000000e+00 1421
4 TraesCS4D01G033800 chr4B 88.511 1088 35 34 800 1842 25946813 25945771 0.000000e+00 1234
5 TraesCS4D01G033800 chr4B 86.496 822 59 26 1 803 25947682 25946894 0.000000e+00 856
6 TraesCS4D01G033800 chr4B 92.188 128 10 0 3053 3180 20719256 20719383 7.800000e-42 182
7 TraesCS4D01G033800 chr4B 90.580 138 11 2 3046 3182 446339210 446339074 7.800000e-42 182
8 TraesCS4D01G033800 chr4A 89.057 1188 61 37 1846 3005 585210992 585212138 0.000000e+00 1410
9 TraesCS4D01G033800 chr4A 86.988 684 45 23 1188 1843 585210025 585210692 0.000000e+00 730
10 TraesCS4D01G033800 chr4A 93.600 375 11 4 790 1153 585209655 585210027 6.680000e-152 547
11 TraesCS4D01G033800 chr4A 83.385 650 47 23 1 641 585208535 585209132 2.400000e-151 545
12 TraesCS4D01G033800 chr4A 93.511 262 16 1 3244 3505 615435279 615435019 4.280000e-104 388
13 TraesCS4D01G033800 chr4A 90.625 128 3 3 672 799 585209130 585209248 1.020000e-35 161
14 TraesCS4D01G033800 chr4A 83.478 115 11 3 310 422 54385381 54385273 2.250000e-17 100
15 TraesCS4D01G033800 chr2D 95.181 249 12 0 3244 3492 541547536 541547288 9.200000e-106 394
16 TraesCS4D01G033800 chr2D 87.742 155 13 6 3052 3204 119228818 119228968 3.630000e-40 176
17 TraesCS4D01G033800 chr6B 94.758 248 13 0 3244 3491 347227148 347227395 1.540000e-103 387
18 TraesCS4D01G033800 chr2B 94.694 245 13 0 3247 3491 135101416 135101660 7.160000e-102 381
19 TraesCS4D01G033800 chr2B 93.307 254 17 0 3238 3491 5367449 5367702 3.330000e-100 375
20 TraesCS4D01G033800 chr2B 91.852 135 11 0 3052 3186 572324575 572324709 4.660000e-44 189
21 TraesCS4D01G033800 chr2B 89.116 147 13 3 3047 3191 608218461 608218606 2.810000e-41 180
22 TraesCS4D01G033800 chr3D 93.023 258 18 0 3235 3492 269465493 269465750 9.270000e-101 377
23 TraesCS4D01G033800 chr1D 92.748 262 16 3 3242 3502 491746010 491745751 3.330000e-100 375
24 TraesCS4D01G033800 chr1D 87.234 94 9 3 323 413 482224772 482224679 1.740000e-18 104
25 TraesCS4D01G033800 chr1B 93.130 131 5 4 3053 3181 377840535 377840407 4.660000e-44 189
26 TraesCS4D01G033800 chr5B 92.424 132 8 2 3049 3179 616648530 616648660 1.680000e-43 187
27 TraesCS4D01G033800 chr5A 90.780 141 12 1 3053 3192 385546016 385545876 1.680000e-43 187
28 TraesCS4D01G033800 chr7A 90.141 142 9 5 3041 3179 43444563 43444702 2.810000e-41 180


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G033800 chr4D 15448488 15452024 3536 True 6532.000000 6532 100.000 1 3537 1 chr4D.!!$R1 3536
1 TraesCS4D01G033800 chr4B 25944628 25947682 3054 True 1170.333333 1421 88.027 1 3020 3 chr4B.!!$R2 3019
2 TraesCS4D01G033800 chr4A 585208535 585212138 3603 False 678.600000 1410 88.731 1 3005 5 chr4A.!!$F1 3004

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
584 590 0.037232 CCGTGAACCCTTCCTGTCTC 60.037 60.0 0.0 0.0 0.0 3.36 F
1389 1856 0.244450 CGGGTAAAGTCCTACACGCA 59.756 55.0 0.0 0.0 41.4 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2234 3056 0.865769 ACATCGTTTTCGCTTTCGCT 59.134 45.0 0.0 0.0 43.73 4.93 R
3048 3912 0.033796 ACGGACGGAGGGAGTATGAA 60.034 55.0 0.0 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.095809 AGTACTGGTGGTCCCTAATGTTAA 58.904 41.667 0.00 0.00 0.00 2.01
44 45 5.252164 TGGTCCCTAATGTTAAGCTTAGGTT 59.748 40.000 16.42 1.39 41.57 3.50
53 54 6.121776 TGTTAAGCTTAGGTTGAATCTCCA 57.878 37.500 6.24 0.00 0.00 3.86
61 62 6.620877 TTAGGTTGAATCTCCAGTATGTGT 57.379 37.500 0.00 0.00 0.00 3.72
62 63 4.836825 AGGTTGAATCTCCAGTATGTGTG 58.163 43.478 0.00 0.00 0.00 3.82
63 64 4.287067 AGGTTGAATCTCCAGTATGTGTGT 59.713 41.667 0.00 0.00 0.00 3.72
64 65 5.483937 AGGTTGAATCTCCAGTATGTGTGTA 59.516 40.000 0.00 0.00 0.00 2.90
164 165 6.588348 TTCATGATGCAAGTACGAATGTAG 57.412 37.500 0.00 0.00 0.00 2.74
236 237 3.118334 TCCCTTCACTCAAAACCACGTTA 60.118 43.478 0.00 0.00 0.00 3.18
316 317 9.642343 AAACTTTTCTTTATCATATCCTACCCC 57.358 33.333 0.00 0.00 0.00 4.95
383 387 2.673893 GCTTTTTGCATTTCCCTACCCG 60.674 50.000 0.00 0.00 42.31 5.28
391 395 3.433173 GCATTTCCCTACCCGTACTCAAT 60.433 47.826 0.00 0.00 0.00 2.57
392 396 4.377897 CATTTCCCTACCCGTACTCAATC 58.622 47.826 0.00 0.00 0.00 2.67
393 397 1.683943 TCCCTACCCGTACTCAATCG 58.316 55.000 0.00 0.00 0.00 3.34
416 421 8.786826 TCGTATCAAATCTTACCAAAATCACT 57.213 30.769 0.00 0.00 0.00 3.41
417 422 8.879759 TCGTATCAAATCTTACCAAAATCACTC 58.120 33.333 0.00 0.00 0.00 3.51
418 423 8.664798 CGTATCAAATCTTACCAAAATCACTCA 58.335 33.333 0.00 0.00 0.00 3.41
421 426 8.463930 TCAAATCTTACCAAAATCACTCAACT 57.536 30.769 0.00 0.00 0.00 3.16
422 427 8.352201 TCAAATCTTACCAAAATCACTCAACTG 58.648 33.333 0.00 0.00 0.00 3.16
423 428 6.824305 ATCTTACCAAAATCACTCAACTGG 57.176 37.500 0.00 0.00 0.00 4.00
424 429 5.935945 TCTTACCAAAATCACTCAACTGGA 58.064 37.500 0.00 0.00 0.00 3.86
425 430 5.763204 TCTTACCAAAATCACTCAACTGGAC 59.237 40.000 0.00 0.00 0.00 4.02
426 431 3.222603 ACCAAAATCACTCAACTGGACC 58.777 45.455 0.00 0.00 0.00 4.46
427 432 2.558359 CCAAAATCACTCAACTGGACCC 59.442 50.000 0.00 0.00 0.00 4.46
428 433 2.558359 CAAAATCACTCAACTGGACCCC 59.442 50.000 0.00 0.00 0.00 4.95
429 434 1.747444 AATCACTCAACTGGACCCCT 58.253 50.000 0.00 0.00 0.00 4.79
430 435 2.642171 ATCACTCAACTGGACCCCTA 57.358 50.000 0.00 0.00 0.00 3.53
431 436 1.640917 TCACTCAACTGGACCCCTAC 58.359 55.000 0.00 0.00 0.00 3.18
432 437 1.132977 TCACTCAACTGGACCCCTACA 60.133 52.381 0.00 0.00 0.00 2.74
437 442 3.371965 TCAACTGGACCCCTACAGATAC 58.628 50.000 0.00 0.00 38.09 2.24
473 478 5.353986 AGCATCTATAACCAGACCCCATAT 58.646 41.667 0.00 0.00 0.00 1.78
554 560 5.073144 GGACCCCTCAAATTGTCCTCATATA 59.927 44.000 3.70 0.00 43.16 0.86
577 583 2.034179 CCAAGTTTTCCGTGAACCCTTC 59.966 50.000 0.00 0.00 0.00 3.46
580 586 1.607148 GTTTTCCGTGAACCCTTCCTG 59.393 52.381 0.00 0.00 0.00 3.86
584 590 0.037232 CCGTGAACCCTTCCTGTCTC 60.037 60.000 0.00 0.00 0.00 3.36
586 592 1.344763 CGTGAACCCTTCCTGTCTCTT 59.655 52.381 0.00 0.00 0.00 2.85
630 643 4.334481 TCATCAATCATGTGCATGTGACTC 59.666 41.667 11.38 0.00 39.72 3.36
631 644 3.011818 TCAATCATGTGCATGTGACTCC 58.988 45.455 11.38 0.00 39.72 3.85
664 677 7.625828 AAAAGTAAGGGACATAACTACATGC 57.374 36.000 0.00 0.00 0.00 4.06
733 753 5.434408 GGGATCAAATTAGTTTAGTCCGGT 58.566 41.667 0.00 0.00 33.84 5.28
756 776 7.039923 CGGTTGTAGATGGTCTAAGGTATATGT 60.040 40.741 0.00 0.00 29.58 2.29
760 780 5.888901 AGATGGTCTAAGGTATATGTCGGA 58.111 41.667 0.00 0.00 0.00 4.55
829 1270 1.925946 GCAGGCAAGTTAAGCAACGTG 60.926 52.381 0.00 0.00 44.15 4.49
972 1431 1.228367 TCTATCCGTACGCCTCCCC 60.228 63.158 10.49 0.00 0.00 4.81
990 1449 2.995574 CGTCCCTCCCTTCACCGT 60.996 66.667 0.00 0.00 0.00 4.83
996 1455 2.203523 TCCCTTCACCGTCCGACA 60.204 61.111 0.00 0.00 0.00 4.35
997 1456 2.048503 CCCTTCACCGTCCGACAC 60.049 66.667 0.00 0.00 0.00 3.67
1014 1473 0.888736 CACACATGGAGGCGAACCAA 60.889 55.000 0.00 0.00 40.93 3.67
1152 1611 2.328099 CGGGAAGCAACTGGTGAGC 61.328 63.158 0.00 0.00 0.00 4.26
1153 1612 1.973812 GGGAAGCAACTGGTGAGCC 60.974 63.158 0.00 0.00 0.00 4.70
1154 1613 1.228245 GGAAGCAACTGGTGAGCCA 60.228 57.895 0.00 0.00 43.73 4.75
1168 1627 6.222038 TGGTGAGCCAGTACTTAATTAGAG 57.778 41.667 0.00 0.00 40.46 2.43
1175 1634 6.043411 GCCAGTACTTAATTAGAGACACCAG 58.957 44.000 0.00 0.00 0.00 4.00
1181 1640 5.940470 ACTTAATTAGAGACACCAGCCAAAG 59.060 40.000 2.84 0.00 0.00 2.77
1186 1645 1.002544 GAGACACCAGCCAAAGTAGCT 59.997 52.381 0.00 0.00 42.70 3.32
1187 1646 2.233922 GAGACACCAGCCAAAGTAGCTA 59.766 50.000 0.00 0.00 38.95 3.32
1188 1647 2.234908 AGACACCAGCCAAAGTAGCTAG 59.765 50.000 0.00 0.00 38.95 3.42
1189 1648 1.339151 ACACCAGCCAAAGTAGCTAGC 60.339 52.381 6.62 6.62 38.95 3.42
1243 1706 1.269778 TGTCTCGCTGACTTGGTTCTG 60.270 52.381 9.20 0.00 45.54 3.02
1388 1855 0.527565 TCGGGTAAAGTCCTACACGC 59.472 55.000 0.62 0.00 46.10 5.34
1389 1856 0.244450 CGGGTAAAGTCCTACACGCA 59.756 55.000 0.00 0.00 41.40 5.24
1390 1857 1.718396 GGGTAAAGTCCTACACGCAC 58.282 55.000 0.00 0.00 0.00 5.34
1391 1858 1.274447 GGGTAAAGTCCTACACGCACT 59.726 52.381 0.00 0.00 0.00 4.40
1393 1860 3.505836 GGTAAAGTCCTACACGCACTAC 58.494 50.000 0.00 0.00 0.00 2.73
1403 1870 3.001067 CGCACTACGCATCTGCTG 58.999 61.111 0.09 0.00 42.60 4.41
1485 1958 3.815401 ACCATAAATAATCGTCTGGCTGC 59.185 43.478 0.00 0.00 0.00 5.25
1486 1959 4.067896 CCATAAATAATCGTCTGGCTGCT 58.932 43.478 0.00 0.00 0.00 4.24
1572 2051 2.079158 CTTCTGCCACCTACACACATG 58.921 52.381 0.00 0.00 0.00 3.21
1579 2058 2.425539 CACCTACACACATGCATGTCA 58.574 47.619 29.23 13.50 39.39 3.58
1594 2073 0.253894 TGTCATGTCCTCCCTGCATG 59.746 55.000 0.00 0.00 40.76 4.06
1597 2076 2.369860 GTCATGTCCTCCCTGCATGATA 59.630 50.000 9.24 0.00 46.82 2.15
1607 2092 4.269183 TCCCTGCATGATAAACGAAATGT 58.731 39.130 0.00 0.00 0.00 2.71
1610 2095 6.545666 TCCCTGCATGATAAACGAAATGTATT 59.454 34.615 0.00 0.00 0.00 1.89
1611 2096 6.638063 CCCTGCATGATAAACGAAATGTATTG 59.362 38.462 0.00 0.00 0.00 1.90
1612 2097 6.142798 CCTGCATGATAAACGAAATGTATTGC 59.857 38.462 0.00 0.00 0.00 3.56
1613 2098 6.558909 TGCATGATAAACGAAATGTATTGCA 58.441 32.000 0.00 0.00 0.00 4.08
1614 2099 7.201835 TGCATGATAAACGAAATGTATTGCAT 58.798 30.769 0.00 0.00 40.03 3.96
1615 2100 7.167801 TGCATGATAAACGAAATGTATTGCATG 59.832 33.333 0.00 0.00 37.96 4.06
1618 2112 6.471841 TGATAAACGAAATGTATTGCATGTGC 59.528 34.615 0.00 0.00 37.96 4.57
1630 2124 8.686397 TGTATTGCATGTGCTTATTTTTACTG 57.314 30.769 6.55 0.00 42.66 2.74
1647 2155 9.878599 ATTTTTACTGCTATATATGAAACGTGC 57.121 29.630 0.00 0.00 0.00 5.34
1778 2286 3.699955 CTCGGACGCCTTCATCGCA 62.700 63.158 0.00 0.00 0.00 5.10
1837 2347 2.684374 TGTACTACTCGTGTGTGTGTGT 59.316 45.455 0.00 0.00 0.00 3.72
1862 2671 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1863 2672 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1864 2673 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2117 2939 6.016024 TGCCATTCTGCATTATTCCTACATTC 60.016 38.462 0.00 0.00 36.04 2.67
2160 2982 7.014326 CAGTGATTGGTTAGCCAGATACTAGTA 59.986 40.741 4.77 4.77 46.91 1.82
2181 3003 9.181805 CTAGTAGTTGTGTGTACATATATGCAC 57.818 37.037 12.79 10.70 36.53 4.57
2231 3053 2.353607 CGCCGTTCCTAGCTAGCG 60.354 66.667 15.74 13.06 37.39 4.26
2232 3054 2.831366 CGCCGTTCCTAGCTAGCGA 61.831 63.158 15.74 11.09 46.03 4.93
2233 3055 1.436336 GCCGTTCCTAGCTAGCGAA 59.564 57.895 15.74 16.04 0.00 4.70
2234 3056 0.179119 GCCGTTCCTAGCTAGCGAAA 60.179 55.000 15.74 6.32 0.00 3.46
2235 3057 1.841450 CCGTTCCTAGCTAGCGAAAG 58.159 55.000 15.74 18.83 0.00 2.62
2261 3083 6.476243 AAAGCGAAAACGATGTGTAACTAT 57.524 33.333 0.00 0.00 38.04 2.12
2262 3084 7.461807 CGAAAGCGAAAACGATGTGTAACTATA 60.462 37.037 0.00 0.00 40.82 1.31
2263 3085 7.585286 AAGCGAAAACGATGTGTAACTATAA 57.415 32.000 0.00 0.00 38.04 0.98
2264 3086 7.766219 AGCGAAAACGATGTGTAACTATAAT 57.234 32.000 0.00 0.00 38.04 1.28
2265 3087 8.193250 AGCGAAAACGATGTGTAACTATAATT 57.807 30.769 0.00 0.00 38.04 1.40
2598 3433 3.305964 CTTCGTCTTCGTCAAGCTTACA 58.694 45.455 0.00 0.00 38.33 2.41
2600 3435 3.909430 TCGTCTTCGTCAAGCTTACAAT 58.091 40.909 0.00 0.00 38.33 2.71
2607 3442 6.365247 TCTTCGTCAAGCTTACAATGTTCTAC 59.635 38.462 0.00 0.00 0.00 2.59
2608 3443 5.779922 TCGTCAAGCTTACAATGTTCTACT 58.220 37.500 0.00 0.00 0.00 2.57
2803 3652 2.824341 CGTTGTACTCTTCCCACCTACT 59.176 50.000 0.00 0.00 0.00 2.57
2804 3653 4.012374 CGTTGTACTCTTCCCACCTACTA 58.988 47.826 0.00 0.00 0.00 1.82
2877 3730 1.071019 CACAGCGCACTCGTTCGTAT 61.071 55.000 11.47 0.00 38.14 3.06
2880 3733 0.523546 AGCGCACTCGTTCGTATCAG 60.524 55.000 11.47 0.00 38.14 2.90
2912 3765 3.121030 GCTTGCCGTGCATCTCGT 61.121 61.111 0.00 0.00 38.76 4.18
2923 3776 4.142902 CCGTGCATCTCGTAAAATGAAAGT 60.143 41.667 0.00 0.00 0.00 2.66
2939 3792 1.816074 AAGTAAAAGATGGGCGCGAA 58.184 45.000 12.10 0.00 0.00 4.70
2940 3793 1.084289 AGTAAAAGATGGGCGCGAAC 58.916 50.000 12.10 0.74 0.00 3.95
2941 3794 0.098200 GTAAAAGATGGGCGCGAACC 59.902 55.000 12.10 12.47 0.00 3.62
2942 3795 0.321741 TAAAAGATGGGCGCGAACCA 60.322 50.000 22.43 22.43 43.22 3.67
2958 3820 4.463186 GCGAACCATATATACCCTCTCACT 59.537 45.833 0.00 0.00 0.00 3.41
2987 3851 3.750130 CACAAGCTTGAGCATCTACAACT 59.250 43.478 32.50 2.30 45.16 3.16
2991 3855 5.604758 AGCTTGAGCATCTACAACTATGA 57.395 39.130 5.70 0.00 45.16 2.15
2994 3858 7.052873 AGCTTGAGCATCTACAACTATGATTT 58.947 34.615 5.70 0.00 45.16 2.17
2998 3862 7.212976 TGAGCATCTACAACTATGATTTCCTC 58.787 38.462 0.00 0.00 34.92 3.71
2999 3863 6.219473 AGCATCTACAACTATGATTTCCTCG 58.781 40.000 0.00 0.00 0.00 4.63
3005 3869 4.122776 CAACTATGATTTCCTCGTCTGGG 58.877 47.826 0.00 0.00 0.00 4.45
3012 3876 2.122813 CCTCGTCTGGGGCCCTAT 60.123 66.667 25.93 0.00 0.00 2.57
3017 3881 1.803366 CGTCTGGGGCCCTATACGTC 61.803 65.000 30.41 11.07 0.00 4.34
3020 3884 3.308705 GGGGCCCTATACGTCCGG 61.309 72.222 24.38 0.00 0.00 5.14
3021 3885 3.308705 GGGCCCTATACGTCCGGG 61.309 72.222 17.04 11.31 41.06 5.73
3022 3886 3.308705 GGCCCTATACGTCCGGGG 61.309 72.222 15.90 14.61 41.64 5.73
3024 3888 2.522436 CCCTATACGTCCGGGGCA 60.522 66.667 0.00 0.00 34.22 5.36
3025 3889 2.571216 CCCTATACGTCCGGGGCAG 61.571 68.421 0.00 0.00 34.22 4.85
3026 3890 1.831286 CCTATACGTCCGGGGCAGT 60.831 63.158 0.00 0.09 0.00 4.40
3027 3891 1.362717 CTATACGTCCGGGGCAGTG 59.637 63.158 0.00 0.00 0.00 3.66
3028 3892 1.076850 TATACGTCCGGGGCAGTGA 60.077 57.895 0.00 0.00 0.00 3.41
3029 3893 1.386525 TATACGTCCGGGGCAGTGAC 61.387 60.000 0.00 0.00 0.00 3.67
3032 3896 3.717294 GTCCGGGGCAGTGACCAT 61.717 66.667 19.21 0.00 27.52 3.55
3033 3897 2.039787 TCCGGGGCAGTGACCATA 59.960 61.111 19.21 0.00 27.52 2.74
3034 3898 1.383943 TCCGGGGCAGTGACCATAT 60.384 57.895 19.21 0.00 27.52 1.78
3035 3899 1.227943 CCGGGGCAGTGACCATATG 60.228 63.158 19.21 2.85 27.52 1.78
3036 3900 1.893808 CGGGGCAGTGACCATATGC 60.894 63.158 19.21 0.00 39.25 3.14
3039 3903 3.736483 GCAGTGACCATATGCCCG 58.264 61.111 0.00 0.00 33.81 6.13
3040 3904 2.546494 GCAGTGACCATATGCCCGC 61.546 63.158 0.00 0.00 33.81 6.13
3041 3905 1.153188 CAGTGACCATATGCCCGCA 60.153 57.895 0.00 0.00 0.00 5.69
3042 3906 1.153168 AGTGACCATATGCCCGCAC 60.153 57.895 0.00 2.68 0.00 5.34
3043 3907 2.186826 GTGACCATATGCCCGCACC 61.187 63.158 0.00 0.00 0.00 5.01
3044 3908 2.594592 GACCATATGCCCGCACCC 60.595 66.667 0.00 0.00 0.00 4.61
3045 3909 3.414136 GACCATATGCCCGCACCCA 62.414 63.158 0.00 0.00 0.00 4.51
3046 3910 2.123939 CCATATGCCCGCACCCAA 60.124 61.111 0.00 0.00 0.00 4.12
3047 3911 1.756172 CCATATGCCCGCACCCAAA 60.756 57.895 0.00 0.00 0.00 3.28
3048 3912 1.114722 CCATATGCCCGCACCCAAAT 61.115 55.000 0.00 0.00 0.00 2.32
3049 3913 0.752054 CATATGCCCGCACCCAAATT 59.248 50.000 0.00 0.00 0.00 1.82
3050 3914 1.039856 ATATGCCCGCACCCAAATTC 58.960 50.000 0.00 0.00 0.00 2.17
3051 3915 0.323816 TATGCCCGCACCCAAATTCA 60.324 50.000 0.00 0.00 0.00 2.57
3052 3916 0.977108 ATGCCCGCACCCAAATTCAT 60.977 50.000 0.00 0.00 0.00 2.57
3053 3917 0.323816 TGCCCGCACCCAAATTCATA 60.324 50.000 0.00 0.00 0.00 2.15
3054 3918 0.102300 GCCCGCACCCAAATTCATAC 59.898 55.000 0.00 0.00 0.00 2.39
3055 3919 1.762708 CCCGCACCCAAATTCATACT 58.237 50.000 0.00 0.00 0.00 2.12
3056 3920 1.676006 CCCGCACCCAAATTCATACTC 59.324 52.381 0.00 0.00 0.00 2.59
3057 3921 1.676006 CCGCACCCAAATTCATACTCC 59.324 52.381 0.00 0.00 0.00 3.85
3058 3922 1.676006 CGCACCCAAATTCATACTCCC 59.324 52.381 0.00 0.00 0.00 4.30
3059 3923 2.683742 CGCACCCAAATTCATACTCCCT 60.684 50.000 0.00 0.00 0.00 4.20
3060 3924 2.952310 GCACCCAAATTCATACTCCCTC 59.048 50.000 0.00 0.00 0.00 4.30
3061 3925 3.555966 CACCCAAATTCATACTCCCTCC 58.444 50.000 0.00 0.00 0.00 4.30
3062 3926 2.172717 ACCCAAATTCATACTCCCTCCG 59.827 50.000 0.00 0.00 0.00 4.63
3063 3927 2.172717 CCCAAATTCATACTCCCTCCGT 59.827 50.000 0.00 0.00 0.00 4.69
3064 3928 3.467803 CCAAATTCATACTCCCTCCGTC 58.532 50.000 0.00 0.00 0.00 4.79
3065 3929 3.467803 CAAATTCATACTCCCTCCGTCC 58.532 50.000 0.00 0.00 0.00 4.79
3066 3930 1.329256 ATTCATACTCCCTCCGTCCG 58.671 55.000 0.00 0.00 0.00 4.79
3067 3931 0.033796 TTCATACTCCCTCCGTCCGT 60.034 55.000 0.00 0.00 0.00 4.69
3068 3932 0.839277 TCATACTCCCTCCGTCCGTA 59.161 55.000 0.00 0.00 0.00 4.02
3069 3933 1.212688 TCATACTCCCTCCGTCCGTAA 59.787 52.381 0.00 0.00 0.00 3.18
3070 3934 2.026641 CATACTCCCTCCGTCCGTAAA 58.973 52.381 0.00 0.00 0.00 2.01
3071 3935 2.442236 TACTCCCTCCGTCCGTAAAT 57.558 50.000 0.00 0.00 0.00 1.40
3072 3936 2.442236 ACTCCCTCCGTCCGTAAATA 57.558 50.000 0.00 0.00 0.00 1.40
3073 3937 2.027385 ACTCCCTCCGTCCGTAAATAC 58.973 52.381 0.00 0.00 0.00 1.89
3074 3938 2.305009 CTCCCTCCGTCCGTAAATACT 58.695 52.381 0.00 0.00 0.00 2.12
3075 3939 2.692041 CTCCCTCCGTCCGTAAATACTT 59.308 50.000 0.00 0.00 0.00 2.24
3076 3940 2.428171 TCCCTCCGTCCGTAAATACTTG 59.572 50.000 0.00 0.00 0.00 3.16
3077 3941 2.167075 CCCTCCGTCCGTAAATACTTGT 59.833 50.000 0.00 0.00 0.00 3.16
3078 3942 3.442100 CCTCCGTCCGTAAATACTTGTC 58.558 50.000 0.00 0.00 0.00 3.18
3079 3943 3.119388 CCTCCGTCCGTAAATACTTGTCA 60.119 47.826 0.00 0.00 0.00 3.58
3080 3944 4.441079 CCTCCGTCCGTAAATACTTGTCAT 60.441 45.833 0.00 0.00 0.00 3.06
3081 3945 4.675510 TCCGTCCGTAAATACTTGTCATC 58.324 43.478 0.00 0.00 0.00 2.92
3082 3946 4.158209 TCCGTCCGTAAATACTTGTCATCA 59.842 41.667 0.00 0.00 0.00 3.07
3083 3947 4.865925 CCGTCCGTAAATACTTGTCATCAA 59.134 41.667 0.00 0.00 0.00 2.57
3084 3948 5.349270 CCGTCCGTAAATACTTGTCATCAAA 59.651 40.000 0.00 0.00 32.87 2.69
3085 3949 6.128499 CCGTCCGTAAATACTTGTCATCAAAA 60.128 38.462 0.00 0.00 32.87 2.44
3086 3950 7.413657 CCGTCCGTAAATACTTGTCATCAAAAT 60.414 37.037 0.00 0.00 32.87 1.82
3087 3951 7.425309 CGTCCGTAAATACTTGTCATCAAAATG 59.575 37.037 0.00 0.00 32.87 2.32
3088 3952 8.447833 GTCCGTAAATACTTGTCATCAAAATGA 58.552 33.333 0.00 0.00 39.63 2.57
3089 3953 9.173021 TCCGTAAATACTTGTCATCAAAATGAT 57.827 29.630 0.00 0.00 43.62 2.45
3090 3954 9.787532 CCGTAAATACTTGTCATCAAAATGATT 57.212 29.630 0.00 0.00 43.62 2.57
3169 4033 8.889849 ATTTTAATGACAAGTATTTTCGGACG 57.110 30.769 0.00 0.00 0.00 4.79
3170 4034 4.939509 AATGACAAGTATTTTCGGACGG 57.060 40.909 0.00 0.00 0.00 4.79
3171 4035 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
3172 4036 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
3173 4037 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3174 4038 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3175 4039 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
3176 4040 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
3177 4041 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
3178 4042 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
3179 4043 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
3180 4044 0.251297 TTTCGGACGGAGGGAGTACA 60.251 55.000 0.00 0.00 0.00 2.90
3181 4045 0.251297 TTCGGACGGAGGGAGTACAA 60.251 55.000 0.00 0.00 0.00 2.41
3182 4046 0.251297 TCGGACGGAGGGAGTACAAA 60.251 55.000 0.00 0.00 0.00 2.83
3183 4047 0.604578 CGGACGGAGGGAGTACAAAA 59.395 55.000 0.00 0.00 0.00 2.44
3184 4048 1.670967 CGGACGGAGGGAGTACAAAAC 60.671 57.143 0.00 0.00 0.00 2.43
3185 4049 1.345415 GGACGGAGGGAGTACAAAACA 59.655 52.381 0.00 0.00 0.00 2.83
3186 4050 2.027469 GGACGGAGGGAGTACAAAACAT 60.027 50.000 0.00 0.00 0.00 2.71
3187 4051 3.000727 GACGGAGGGAGTACAAAACATG 58.999 50.000 0.00 0.00 0.00 3.21
3188 4052 1.737793 CGGAGGGAGTACAAAACATGC 59.262 52.381 0.00 0.00 0.00 4.06
3189 4053 2.790433 GGAGGGAGTACAAAACATGCA 58.210 47.619 0.00 0.00 0.00 3.96
3190 4054 2.749621 GGAGGGAGTACAAAACATGCAG 59.250 50.000 0.00 0.00 0.00 4.41
3191 4055 3.559171 GGAGGGAGTACAAAACATGCAGA 60.559 47.826 0.00 0.00 0.00 4.26
3192 4056 3.679389 AGGGAGTACAAAACATGCAGAG 58.321 45.455 0.00 0.00 0.00 3.35
3193 4057 2.749621 GGGAGTACAAAACATGCAGAGG 59.250 50.000 0.00 0.00 0.00 3.69
3194 4058 3.412386 GGAGTACAAAACATGCAGAGGT 58.588 45.455 0.00 0.00 0.00 3.85
3195 4059 4.564821 GGGAGTACAAAACATGCAGAGGTA 60.565 45.833 0.00 0.00 0.00 3.08
3196 4060 4.631813 GGAGTACAAAACATGCAGAGGTAG 59.368 45.833 0.00 0.00 0.00 3.18
3197 4061 5.479306 GAGTACAAAACATGCAGAGGTAGA 58.521 41.667 0.00 0.00 0.00 2.59
3198 4062 6.054860 AGTACAAAACATGCAGAGGTAGAT 57.945 37.500 0.00 0.00 0.00 1.98
3199 4063 6.109359 AGTACAAAACATGCAGAGGTAGATC 58.891 40.000 0.00 0.00 0.00 2.75
3200 4064 4.910195 ACAAAACATGCAGAGGTAGATCA 58.090 39.130 0.00 0.00 0.00 2.92
3201 4065 5.503927 ACAAAACATGCAGAGGTAGATCAT 58.496 37.500 0.00 0.00 0.00 2.45
3202 4066 5.356190 ACAAAACATGCAGAGGTAGATCATG 59.644 40.000 0.00 0.00 40.07 3.07
3203 4067 3.766068 ACATGCAGAGGTAGATCATGG 57.234 47.619 0.00 0.00 38.92 3.66
3204 4068 2.224475 ACATGCAGAGGTAGATCATGGC 60.224 50.000 0.00 0.00 38.92 4.40
3205 4069 1.499368 TGCAGAGGTAGATCATGGCA 58.501 50.000 0.00 0.00 0.00 4.92
3206 4070 1.839354 TGCAGAGGTAGATCATGGCAA 59.161 47.619 0.00 0.00 0.00 4.52
3207 4071 2.216898 GCAGAGGTAGATCATGGCAAC 58.783 52.381 0.00 0.00 0.00 4.17
3225 4089 6.591001 TGGCAACATAGAAATATAGAGCACA 58.409 36.000 0.00 0.00 46.17 4.57
3226 4090 6.483307 TGGCAACATAGAAATATAGAGCACAC 59.517 38.462 0.00 0.00 46.17 3.82
3227 4091 6.708054 GGCAACATAGAAATATAGAGCACACT 59.292 38.462 0.00 0.00 0.00 3.55
3228 4092 7.095439 GGCAACATAGAAATATAGAGCACACTC 60.095 40.741 0.00 0.00 43.82 3.51
3236 4100 4.427394 GAGCACACTCGGGCATAG 57.573 61.111 0.00 0.00 32.04 2.23
3237 4101 1.816537 GAGCACACTCGGGCATAGA 59.183 57.895 0.00 0.00 32.04 1.98
3238 4102 0.390860 GAGCACACTCGGGCATAGAT 59.609 55.000 0.00 0.00 32.04 1.98
3239 4103 0.390860 AGCACACTCGGGCATAGATC 59.609 55.000 0.00 0.00 0.00 2.75
3240 4104 0.601311 GCACACTCGGGCATAGATCC 60.601 60.000 0.00 0.00 0.00 3.36
3241 4105 0.752658 CACACTCGGGCATAGATCCA 59.247 55.000 0.00 0.00 0.00 3.41
3242 4106 0.753262 ACACTCGGGCATAGATCCAC 59.247 55.000 0.00 0.00 0.00 4.02
3243 4107 0.752658 CACTCGGGCATAGATCCACA 59.247 55.000 0.00 0.00 0.00 4.17
3244 4108 1.345741 CACTCGGGCATAGATCCACAT 59.654 52.381 0.00 0.00 0.00 3.21
3245 4109 1.620819 ACTCGGGCATAGATCCACATC 59.379 52.381 0.00 0.00 0.00 3.06
3246 4110 1.898472 CTCGGGCATAGATCCACATCT 59.102 52.381 0.00 0.00 42.48 2.90
3247 4111 3.092301 CTCGGGCATAGATCCACATCTA 58.908 50.000 0.00 0.00 44.29 1.98
3249 4113 4.867086 TCGGGCATAGATCCACATCTATA 58.133 43.478 4.53 0.00 46.65 1.31
3250 4114 5.458595 TCGGGCATAGATCCACATCTATAT 58.541 41.667 4.53 0.00 46.65 0.86
3251 4115 5.536538 TCGGGCATAGATCCACATCTATATC 59.463 44.000 4.53 1.37 46.65 1.63
3252 4116 5.538053 CGGGCATAGATCCACATCTATATCT 59.462 44.000 4.53 0.00 46.65 1.98
3253 4117 6.717084 CGGGCATAGATCCACATCTATATCTA 59.283 42.308 4.53 0.00 46.65 1.98
3254 4118 7.395772 CGGGCATAGATCCACATCTATATCTAT 59.604 40.741 4.53 0.00 46.65 1.98
3255 4119 9.760926 GGGCATAGATCCACATCTATATCTATA 57.239 37.037 4.53 0.00 46.65 1.31
3280 4144 8.926092 ATCTATATAAAAAGACTCAAAGGGGC 57.074 34.615 0.00 0.00 0.00 5.80
3281 4145 7.867921 TCTATATAAAAAGACTCAAAGGGGCA 58.132 34.615 0.00 0.00 0.00 5.36
3282 4146 7.993183 TCTATATAAAAAGACTCAAAGGGGCAG 59.007 37.037 0.00 0.00 0.00 4.85
3283 4147 3.312736 AAAAAGACTCAAAGGGGCAGA 57.687 42.857 0.00 0.00 0.00 4.26
3284 4148 3.532641 AAAAGACTCAAAGGGGCAGAT 57.467 42.857 0.00 0.00 0.00 2.90
3285 4149 2.797177 AAGACTCAAAGGGGCAGATC 57.203 50.000 0.00 0.00 0.00 2.75
3286 4150 0.915364 AGACTCAAAGGGGCAGATCC 59.085 55.000 0.00 0.00 0.00 3.36
3287 4151 0.620556 GACTCAAAGGGGCAGATCCA 59.379 55.000 0.00 0.00 36.21 3.41
3288 4152 1.004745 GACTCAAAGGGGCAGATCCAA 59.995 52.381 0.00 0.00 36.21 3.53
3289 4153 1.642762 ACTCAAAGGGGCAGATCCAAT 59.357 47.619 0.00 0.00 36.21 3.16
3290 4154 2.043526 ACTCAAAGGGGCAGATCCAATT 59.956 45.455 0.00 0.00 36.21 2.32
3291 4155 3.269381 ACTCAAAGGGGCAGATCCAATTA 59.731 43.478 0.00 0.00 36.21 1.40
3292 4156 4.264352 ACTCAAAGGGGCAGATCCAATTAA 60.264 41.667 0.00 0.00 36.21 1.40
3293 4157 4.882559 TCAAAGGGGCAGATCCAATTAAT 58.117 39.130 0.00 0.00 36.21 1.40
3294 4158 4.895297 TCAAAGGGGCAGATCCAATTAATC 59.105 41.667 0.00 0.00 36.21 1.75
3295 4159 4.821532 AAGGGGCAGATCCAATTAATCT 57.178 40.909 0.00 0.00 36.21 2.40
3296 4160 4.379302 AGGGGCAGATCCAATTAATCTC 57.621 45.455 0.62 0.00 36.21 2.75
3297 4161 3.077359 GGGGCAGATCCAATTAATCTCG 58.923 50.000 0.62 0.00 36.21 4.04
3298 4162 3.077359 GGGCAGATCCAATTAATCTCGG 58.923 50.000 0.62 0.00 36.21 4.63
3299 4163 2.485814 GGCAGATCCAATTAATCTCGGC 59.514 50.000 0.62 2.99 31.05 5.54
3300 4164 2.485814 GCAGATCCAATTAATCTCGGCC 59.514 50.000 0.00 0.00 31.05 6.13
3301 4165 3.743521 CAGATCCAATTAATCTCGGCCA 58.256 45.455 2.24 0.00 31.05 5.36
3302 4166 4.330250 CAGATCCAATTAATCTCGGCCAT 58.670 43.478 2.24 0.00 31.05 4.40
3303 4167 4.394300 CAGATCCAATTAATCTCGGCCATC 59.606 45.833 2.24 0.00 31.05 3.51
3304 4168 3.855255 TCCAATTAATCTCGGCCATCA 57.145 42.857 2.24 0.00 0.00 3.07
3305 4169 4.163441 TCCAATTAATCTCGGCCATCAA 57.837 40.909 2.24 0.00 0.00 2.57
3306 4170 4.531854 TCCAATTAATCTCGGCCATCAAA 58.468 39.130 2.24 0.00 0.00 2.69
3307 4171 5.139727 TCCAATTAATCTCGGCCATCAAAT 58.860 37.500 2.24 0.00 0.00 2.32
3308 4172 5.241506 TCCAATTAATCTCGGCCATCAAATC 59.758 40.000 2.24 0.00 0.00 2.17
3309 4173 5.009911 CCAATTAATCTCGGCCATCAAATCA 59.990 40.000 2.24 0.00 0.00 2.57
3310 4174 6.294899 CCAATTAATCTCGGCCATCAAATCAT 60.295 38.462 2.24 0.00 0.00 2.45
3311 4175 7.094248 CCAATTAATCTCGGCCATCAAATCATA 60.094 37.037 2.24 0.00 0.00 2.15
3312 4176 8.464404 CAATTAATCTCGGCCATCAAATCATAT 58.536 33.333 2.24 0.00 0.00 1.78
3313 4177 7.615582 TTAATCTCGGCCATCAAATCATATC 57.384 36.000 2.24 0.00 0.00 1.63
3314 4178 4.622260 TCTCGGCCATCAAATCATATCA 57.378 40.909 2.24 0.00 0.00 2.15
3315 4179 4.971939 TCTCGGCCATCAAATCATATCAA 58.028 39.130 2.24 0.00 0.00 2.57
3316 4180 5.563592 TCTCGGCCATCAAATCATATCAAT 58.436 37.500 2.24 0.00 0.00 2.57
3317 4181 5.645067 TCTCGGCCATCAAATCATATCAATC 59.355 40.000 2.24 0.00 0.00 2.67
3318 4182 4.701651 TCGGCCATCAAATCATATCAATCC 59.298 41.667 2.24 0.00 0.00 3.01
3319 4183 4.460034 CGGCCATCAAATCATATCAATCCA 59.540 41.667 2.24 0.00 0.00 3.41
3320 4184 5.047872 CGGCCATCAAATCATATCAATCCAA 60.048 40.000 2.24 0.00 0.00 3.53
3321 4185 6.161381 GGCCATCAAATCATATCAATCCAAC 58.839 40.000 0.00 0.00 0.00 3.77
3322 4186 5.860182 GCCATCAAATCATATCAATCCAACG 59.140 40.000 0.00 0.00 0.00 4.10
3323 4187 6.294120 GCCATCAAATCATATCAATCCAACGA 60.294 38.462 0.00 0.00 0.00 3.85
3324 4188 7.080099 CCATCAAATCATATCAATCCAACGAC 58.920 38.462 0.00 0.00 0.00 4.34
3325 4189 6.618287 TCAAATCATATCAATCCAACGACC 57.382 37.500 0.00 0.00 0.00 4.79
3326 4190 6.356556 TCAAATCATATCAATCCAACGACCT 58.643 36.000 0.00 0.00 0.00 3.85
3327 4191 7.505258 TCAAATCATATCAATCCAACGACCTA 58.495 34.615 0.00 0.00 0.00 3.08
3328 4192 7.657354 TCAAATCATATCAATCCAACGACCTAG 59.343 37.037 0.00 0.00 0.00 3.02
3329 4193 6.918067 ATCATATCAATCCAACGACCTAGA 57.082 37.500 0.00 0.00 0.00 2.43
3330 4194 6.085555 TCATATCAATCCAACGACCTAGAC 57.914 41.667 0.00 0.00 0.00 2.59
3331 4195 5.833667 TCATATCAATCCAACGACCTAGACT 59.166 40.000 0.00 0.00 0.00 3.24
3332 4196 3.868757 TCAATCCAACGACCTAGACTG 57.131 47.619 0.00 0.00 0.00 3.51
3333 4197 2.094182 TCAATCCAACGACCTAGACTGC 60.094 50.000 0.00 0.00 0.00 4.40
3334 4198 1.853963 ATCCAACGACCTAGACTGCT 58.146 50.000 0.00 0.00 0.00 4.24
3335 4199 1.174783 TCCAACGACCTAGACTGCTC 58.825 55.000 0.00 0.00 0.00 4.26
3336 4200 0.173708 CCAACGACCTAGACTGCTCC 59.826 60.000 0.00 0.00 0.00 4.70
3337 4201 0.888619 CAACGACCTAGACTGCTCCA 59.111 55.000 0.00 0.00 0.00 3.86
3338 4202 1.272490 CAACGACCTAGACTGCTCCAA 59.728 52.381 0.00 0.00 0.00 3.53
3339 4203 1.853963 ACGACCTAGACTGCTCCAAT 58.146 50.000 0.00 0.00 0.00 3.16
3340 4204 1.478510 ACGACCTAGACTGCTCCAATG 59.521 52.381 0.00 0.00 0.00 2.82
3341 4205 1.478510 CGACCTAGACTGCTCCAATGT 59.521 52.381 0.00 0.00 0.00 2.71
3342 4206 2.480416 CGACCTAGACTGCTCCAATGTC 60.480 54.545 0.00 0.00 0.00 3.06
3343 4207 1.478510 ACCTAGACTGCTCCAATGTCG 59.521 52.381 0.00 0.00 36.01 4.35
3344 4208 1.751351 CCTAGACTGCTCCAATGTCGA 59.249 52.381 0.00 0.00 36.01 4.20
3345 4209 2.223688 CCTAGACTGCTCCAATGTCGAG 60.224 54.545 0.00 0.00 36.01 4.04
3349 4213 2.510238 GCTCCAATGTCGAGCGCT 60.510 61.111 11.27 11.27 43.04 5.92
3350 4214 2.520904 GCTCCAATGTCGAGCGCTC 61.521 63.158 27.64 27.64 43.04 5.03
3351 4215 1.153765 CTCCAATGTCGAGCGCTCA 60.154 57.895 34.69 18.66 0.00 4.26
3352 4216 0.737367 CTCCAATGTCGAGCGCTCAA 60.737 55.000 34.69 17.41 0.00 3.02
3353 4217 1.014044 TCCAATGTCGAGCGCTCAAC 61.014 55.000 34.69 28.50 0.00 3.18
3354 4218 1.291184 CCAATGTCGAGCGCTCAACA 61.291 55.000 31.47 31.47 0.00 3.33
3355 4219 0.179240 CAATGTCGAGCGCTCAACAC 60.179 55.000 31.93 24.81 0.00 3.32
3356 4220 1.617755 AATGTCGAGCGCTCAACACG 61.618 55.000 31.93 20.44 0.00 4.49
3357 4221 2.729862 GTCGAGCGCTCAACACGT 60.730 61.111 34.69 0.00 0.00 4.49
3358 4222 2.027024 TCGAGCGCTCAACACGTT 59.973 55.556 34.69 0.00 0.00 3.99
3359 4223 1.590525 TCGAGCGCTCAACACGTTT 60.591 52.632 34.69 0.00 0.00 3.60
3360 4224 0.318022 TCGAGCGCTCAACACGTTTA 60.318 50.000 34.69 4.78 0.00 2.01
3361 4225 0.091344 CGAGCGCTCAACACGTTTAG 59.909 55.000 34.69 12.34 0.00 1.85
3362 4226 0.179248 GAGCGCTCAACACGTTTAGC 60.179 55.000 31.91 6.11 36.68 3.09
3377 4241 4.459606 CGTTTAGCGTGCAGTTAATTTCA 58.540 39.130 0.00 0.00 35.54 2.69
3378 4242 5.086058 CGTTTAGCGTGCAGTTAATTTCAT 58.914 37.500 0.00 0.00 35.54 2.57
3379 4243 5.002468 CGTTTAGCGTGCAGTTAATTTCATG 59.998 40.000 0.00 0.00 35.54 3.07
3380 4244 2.867429 AGCGTGCAGTTAATTTCATGC 58.133 42.857 6.69 6.69 40.63 4.06
3381 4245 2.228582 AGCGTGCAGTTAATTTCATGCA 59.771 40.909 15.07 7.58 45.82 3.96
3399 4263 9.734620 TTTCATGCAAAATATAGTGCTAATCAC 57.265 29.630 10.84 0.00 45.98 3.06
3412 4276 6.043327 GTGCTAATCACATAATAACACGCA 57.957 37.500 0.00 0.00 44.98 5.24
3413 4277 6.482835 GTGCTAATCACATAATAACACGCAA 58.517 36.000 0.00 0.00 44.98 4.85
3414 4278 6.964370 GTGCTAATCACATAATAACACGCAAA 59.036 34.615 0.00 0.00 44.98 3.68
3415 4279 7.643764 GTGCTAATCACATAATAACACGCAAAT 59.356 33.333 0.00 0.00 44.98 2.32
3416 4280 8.831550 TGCTAATCACATAATAACACGCAAATA 58.168 29.630 0.00 0.00 0.00 1.40
3417 4281 9.658475 GCTAATCACATAATAACACGCAAATAA 57.342 29.630 0.00 0.00 0.00 1.40
3442 4306 9.672673 AATATCCTACTTAATATCCACATGCAC 57.327 33.333 0.00 0.00 0.00 4.57
3443 4307 6.747414 TCCTACTTAATATCCACATGCACT 57.253 37.500 0.00 0.00 0.00 4.40
3444 4308 7.136822 TCCTACTTAATATCCACATGCACTT 57.863 36.000 0.00 0.00 0.00 3.16
3445 4309 8.257602 TCCTACTTAATATCCACATGCACTTA 57.742 34.615 0.00 0.00 0.00 2.24
3446 4310 8.710239 TCCTACTTAATATCCACATGCACTTAA 58.290 33.333 0.00 0.00 0.00 1.85
3447 4311 9.507329 CCTACTTAATATCCACATGCACTTAAT 57.493 33.333 0.00 0.00 0.00 1.40
3456 4320 8.978874 ATCCACATGCACTTAATATACTTTCA 57.021 30.769 0.00 0.00 0.00 2.69
3457 4321 8.800370 TCCACATGCACTTAATATACTTTCAA 57.200 30.769 0.00 0.00 0.00 2.69
3458 4322 9.237187 TCCACATGCACTTAATATACTTTCAAA 57.763 29.630 0.00 0.00 0.00 2.69
3474 4338 7.617533 ACTTTCAAATTAACGTGCATTACAC 57.382 32.000 0.00 0.00 46.45 2.90
3486 4350 5.968251 GTGCATTACACGTACAAATTGAC 57.032 39.130 0.00 0.00 40.07 3.18
3487 4351 5.685841 GTGCATTACACGTACAAATTGACT 58.314 37.500 0.00 0.00 40.07 3.41
3488 4352 6.823531 GTGCATTACACGTACAAATTGACTA 58.176 36.000 0.00 0.00 40.07 2.59
3489 4353 6.953743 GTGCATTACACGTACAAATTGACTAG 59.046 38.462 0.00 0.00 40.07 2.57
3490 4354 6.647481 TGCATTACACGTACAAATTGACTAGT 59.353 34.615 0.00 0.00 0.00 2.57
3491 4355 7.813627 TGCATTACACGTACAAATTGACTAGTA 59.186 33.333 0.00 0.00 0.00 1.82
3492 4356 8.649841 GCATTACACGTACAAATTGACTAGTAA 58.350 33.333 0.00 3.15 0.00 2.24
3493 4357 9.947897 CATTACACGTACAAATTGACTAGTAAC 57.052 33.333 0.00 0.00 0.00 2.50
3494 4358 9.695526 ATTACACGTACAAATTGACTAGTAACA 57.304 29.630 0.00 0.00 0.00 2.41
3495 4359 7.398834 ACACGTACAAATTGACTAGTAACAC 57.601 36.000 0.00 0.00 0.00 3.32
3496 4360 6.421801 ACACGTACAAATTGACTAGTAACACC 59.578 38.462 0.00 0.00 0.00 4.16
3497 4361 5.928264 ACGTACAAATTGACTAGTAACACCC 59.072 40.000 0.00 0.00 0.00 4.61
3498 4362 5.927689 CGTACAAATTGACTAGTAACACCCA 59.072 40.000 0.00 0.00 0.00 4.51
3499 4363 6.424509 CGTACAAATTGACTAGTAACACCCAA 59.575 38.462 0.00 0.00 0.00 4.12
3500 4364 7.041916 CGTACAAATTGACTAGTAACACCCAAA 60.042 37.037 0.00 0.00 0.00 3.28
3501 4365 7.648039 ACAAATTGACTAGTAACACCCAAAA 57.352 32.000 0.00 0.00 0.00 2.44
3502 4366 7.712797 ACAAATTGACTAGTAACACCCAAAAG 58.287 34.615 0.00 0.00 0.00 2.27
3503 4367 7.558444 ACAAATTGACTAGTAACACCCAAAAGA 59.442 33.333 0.00 0.00 0.00 2.52
3504 4368 7.506328 AATTGACTAGTAACACCCAAAAGAC 57.494 36.000 0.00 0.00 0.00 3.01
3505 4369 5.617528 TGACTAGTAACACCCAAAAGACA 57.382 39.130 0.00 0.00 0.00 3.41
3506 4370 6.182507 TGACTAGTAACACCCAAAAGACAT 57.817 37.500 0.00 0.00 0.00 3.06
3507 4371 7.305813 TGACTAGTAACACCCAAAAGACATA 57.694 36.000 0.00 0.00 0.00 2.29
3508 4372 7.383687 TGACTAGTAACACCCAAAAGACATAG 58.616 38.462 0.00 0.00 0.00 2.23
3509 4373 7.015877 TGACTAGTAACACCCAAAAGACATAGT 59.984 37.037 0.00 0.00 0.00 2.12
3510 4374 7.742767 ACTAGTAACACCCAAAAGACATAGTT 58.257 34.615 0.00 0.00 0.00 2.24
3511 4375 8.873144 ACTAGTAACACCCAAAAGACATAGTTA 58.127 33.333 0.00 0.00 0.00 2.24
3512 4376 9.715121 CTAGTAACACCCAAAAGACATAGTTAA 57.285 33.333 0.00 0.00 0.00 2.01
3513 4377 8.983702 AGTAACACCCAAAAGACATAGTTAAA 57.016 30.769 0.00 0.00 0.00 1.52
3514 4378 8.843262 AGTAACACCCAAAAGACATAGTTAAAC 58.157 33.333 0.00 0.00 0.00 2.01
3515 4379 7.648039 AACACCCAAAAGACATAGTTAAACA 57.352 32.000 0.00 0.00 0.00 2.83
3516 4380 7.833285 ACACCCAAAAGACATAGTTAAACAT 57.167 32.000 0.00 0.00 0.00 2.71
3517 4381 8.245195 ACACCCAAAAGACATAGTTAAACATT 57.755 30.769 0.00 0.00 0.00 2.71
3518 4382 8.700973 ACACCCAAAAGACATAGTTAAACATTT 58.299 29.630 0.00 0.00 0.00 2.32
3519 4383 9.191995 CACCCAAAAGACATAGTTAAACATTTC 57.808 33.333 0.00 0.00 0.00 2.17
3520 4384 8.919145 ACCCAAAAGACATAGTTAAACATTTCA 58.081 29.630 0.00 0.00 0.00 2.69
3521 4385 9.191995 CCCAAAAGACATAGTTAAACATTTCAC 57.808 33.333 0.00 0.00 0.00 3.18
3522 4386 9.191995 CCAAAAGACATAGTTAAACATTTCACC 57.808 33.333 0.00 0.00 0.00 4.02
3523 4387 9.191995 CAAAAGACATAGTTAAACATTTCACCC 57.808 33.333 0.00 0.00 0.00 4.61
3524 4388 8.472007 AAAGACATAGTTAAACATTTCACCCA 57.528 30.769 0.00 0.00 0.00 4.51
3525 4389 7.687941 AGACATAGTTAAACATTTCACCCAG 57.312 36.000 0.00 0.00 0.00 4.45
3526 4390 7.458397 AGACATAGTTAAACATTTCACCCAGA 58.542 34.615 0.00 0.00 0.00 3.86
3527 4391 7.942341 AGACATAGTTAAACATTTCACCCAGAA 59.058 33.333 0.00 0.00 0.00 3.02
3528 4392 8.110860 ACATAGTTAAACATTTCACCCAGAAG 57.889 34.615 0.00 0.00 37.57 2.85
3529 4393 7.176690 ACATAGTTAAACATTTCACCCAGAAGG 59.823 37.037 0.00 0.00 43.78 3.46
3530 4394 4.280929 AGTTAAACATTTCACCCAGAAGGC 59.719 41.667 0.00 0.00 40.58 4.35
3531 4395 2.380064 AACATTTCACCCAGAAGGCA 57.620 45.000 0.00 0.00 40.58 4.75
3532 4396 2.610438 ACATTTCACCCAGAAGGCAT 57.390 45.000 0.00 0.00 40.58 4.40
3533 4397 3.737559 ACATTTCACCCAGAAGGCATA 57.262 42.857 0.00 0.00 40.58 3.14
3534 4398 3.624777 ACATTTCACCCAGAAGGCATAG 58.375 45.455 0.00 0.00 40.58 2.23
3535 4399 3.010584 ACATTTCACCCAGAAGGCATAGT 59.989 43.478 0.00 0.00 40.58 2.12
3536 4400 3.806949 TTTCACCCAGAAGGCATAGTT 57.193 42.857 0.00 0.00 40.58 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 5.426833 ACATACTGGAGATTCAACCTAAGCT 59.573 40.000 0.00 0.00 0.00 3.74
53 54 9.459640 GAAACGTGACATATATACACACATACT 57.540 33.333 16.83 2.36 34.69 2.12
61 62 8.446599 TCTCTCTGAAACGTGACATATATACA 57.553 34.615 0.00 0.00 0.00 2.29
62 63 9.731819 TTTCTCTCTGAAACGTGACATATATAC 57.268 33.333 0.00 0.00 39.50 1.47
127 128 7.255491 TGCATCATGAAAATCATCTCTGTAC 57.745 36.000 0.00 0.00 34.28 2.90
164 165 4.036144 GGACTCTAATTGAGCCTTGCATTC 59.964 45.833 0.00 0.00 46.41 2.67
305 306 9.059023 GATTTGATTTAGGTAGGGGTAGGATAT 57.941 37.037 0.00 0.00 0.00 1.63
307 308 6.855061 TGATTTGATTTAGGTAGGGGTAGGAT 59.145 38.462 0.00 0.00 0.00 3.24
316 317 9.627123 TGGTAGGATTTGATTTGATTTAGGTAG 57.373 33.333 0.00 0.00 0.00 3.18
383 387 8.867112 TGGTAAGATTTGATACGATTGAGTAC 57.133 34.615 0.00 0.00 0.00 2.73
391 395 8.786826 AGTGATTTTGGTAAGATTTGATACGA 57.213 30.769 0.00 0.00 0.00 3.43
392 396 8.664798 TGAGTGATTTTGGTAAGATTTGATACG 58.335 33.333 0.00 0.00 0.00 3.06
413 418 1.276421 CTGTAGGGGTCCAGTTGAGTG 59.724 57.143 0.00 0.00 0.00 3.51
414 419 1.149288 TCTGTAGGGGTCCAGTTGAGT 59.851 52.381 0.00 0.00 0.00 3.41
415 420 1.938585 TCTGTAGGGGTCCAGTTGAG 58.061 55.000 0.00 0.00 0.00 3.02
416 421 2.642171 ATCTGTAGGGGTCCAGTTGA 57.358 50.000 0.00 0.00 0.00 3.18
417 422 2.100916 CGTATCTGTAGGGGTCCAGTTG 59.899 54.545 0.00 0.00 0.00 3.16
418 423 2.024655 TCGTATCTGTAGGGGTCCAGTT 60.025 50.000 0.00 0.00 0.00 3.16
419 424 1.567649 TCGTATCTGTAGGGGTCCAGT 59.432 52.381 0.00 0.00 0.00 4.00
420 425 2.359981 TCGTATCTGTAGGGGTCCAG 57.640 55.000 0.00 0.00 0.00 3.86
421 426 2.594131 CATCGTATCTGTAGGGGTCCA 58.406 52.381 0.00 0.00 0.00 4.02
422 427 1.893801 CCATCGTATCTGTAGGGGTCC 59.106 57.143 0.00 0.00 0.00 4.46
423 428 1.893801 CCCATCGTATCTGTAGGGGTC 59.106 57.143 0.00 0.00 32.59 4.46
424 429 1.219724 ACCCATCGTATCTGTAGGGGT 59.780 52.381 0.00 0.00 42.33 4.95
425 430 1.618837 CACCCATCGTATCTGTAGGGG 59.381 57.143 0.00 0.00 40.64 4.79
426 431 2.317040 ACACCCATCGTATCTGTAGGG 58.683 52.381 0.00 0.00 42.07 3.53
427 432 4.825634 TCTTACACCCATCGTATCTGTAGG 59.174 45.833 0.00 0.00 0.00 3.18
428 433 5.563085 GCTCTTACACCCATCGTATCTGTAG 60.563 48.000 0.00 0.00 0.00 2.74
429 434 4.277672 GCTCTTACACCCATCGTATCTGTA 59.722 45.833 0.00 0.00 0.00 2.74
430 435 3.068307 GCTCTTACACCCATCGTATCTGT 59.932 47.826 0.00 0.00 0.00 3.41
431 436 3.068165 TGCTCTTACACCCATCGTATCTG 59.932 47.826 0.00 0.00 0.00 2.90
432 437 3.296854 TGCTCTTACACCCATCGTATCT 58.703 45.455 0.00 0.00 0.00 1.98
437 442 2.898729 AGATGCTCTTACACCCATCG 57.101 50.000 0.00 0.00 39.16 3.84
554 560 2.158519 AGGGTTCACGGAAAACTTGGAT 60.159 45.455 0.00 0.00 0.00 3.41
610 623 3.011818 GGAGTCACATGCACATGATTGA 58.988 45.455 17.19 8.48 41.20 2.57
642 655 6.113411 GTGCATGTAGTTATGTCCCTTACTT 58.887 40.000 0.00 0.00 0.00 2.24
651 664 7.656412 TCATTTGTTTGTGCATGTAGTTATGT 58.344 30.769 0.00 0.00 0.00 2.29
656 669 4.022068 CCCTCATTTGTTTGTGCATGTAGT 60.022 41.667 0.00 0.00 0.00 2.73
659 672 2.548493 GCCCTCATTTGTTTGTGCATGT 60.548 45.455 0.00 0.00 0.00 3.21
664 677 1.068333 CCGAGCCCTCATTTGTTTGTG 60.068 52.381 0.00 0.00 0.00 3.33
733 753 7.176165 CCGACATATACCTTAGACCATCTACAA 59.824 40.741 0.00 0.00 0.00 2.41
829 1270 2.287915 CGCCTATTTATGCACCAGACAC 59.712 50.000 0.00 0.00 0.00 3.67
972 1431 3.771160 CGGTGAAGGGAGGGACGG 61.771 72.222 0.00 0.00 0.00 4.79
974 1433 2.657066 GGACGGTGAAGGGAGGGAC 61.657 68.421 0.00 0.00 0.00 4.46
990 1449 2.662596 GCCTCCATGTGTGTCGGA 59.337 61.111 0.00 0.00 0.00 4.55
996 1455 0.606401 CTTGGTTCGCCTCCATGTGT 60.606 55.000 0.00 0.00 38.36 3.72
997 1456 0.321564 TCTTGGTTCGCCTCCATGTG 60.322 55.000 0.00 0.00 38.36 3.21
1014 1473 0.682855 CAGTCTCCGGAGCCTTCTCT 60.683 60.000 27.39 13.55 39.31 3.10
1152 1611 6.043411 GCTGGTGTCTCTAATTAAGTACTGG 58.957 44.000 0.00 0.00 0.00 4.00
1153 1612 6.043411 GGCTGGTGTCTCTAATTAAGTACTG 58.957 44.000 0.00 0.00 0.00 2.74
1154 1613 5.720041 TGGCTGGTGTCTCTAATTAAGTACT 59.280 40.000 0.00 0.00 0.00 2.73
1155 1614 5.974108 TGGCTGGTGTCTCTAATTAAGTAC 58.026 41.667 0.00 0.00 0.00 2.73
1156 1615 6.614694 TTGGCTGGTGTCTCTAATTAAGTA 57.385 37.500 0.00 0.00 0.00 2.24
1157 1616 5.499004 TTGGCTGGTGTCTCTAATTAAGT 57.501 39.130 0.00 0.00 0.00 2.24
1158 1617 5.940470 ACTTTGGCTGGTGTCTCTAATTAAG 59.060 40.000 0.00 0.00 0.00 1.85
1159 1618 5.876357 ACTTTGGCTGGTGTCTCTAATTAA 58.124 37.500 0.00 0.00 0.00 1.40
1160 1619 5.499004 ACTTTGGCTGGTGTCTCTAATTA 57.501 39.130 0.00 0.00 0.00 1.40
1161 1620 4.373156 ACTTTGGCTGGTGTCTCTAATT 57.627 40.909 0.00 0.00 0.00 1.40
1162 1621 4.624125 GCTACTTTGGCTGGTGTCTCTAAT 60.624 45.833 0.00 0.00 0.00 1.73
1163 1622 3.306780 GCTACTTTGGCTGGTGTCTCTAA 60.307 47.826 0.00 0.00 0.00 2.10
1164 1623 2.233922 GCTACTTTGGCTGGTGTCTCTA 59.766 50.000 0.00 0.00 0.00 2.43
1165 1624 1.002544 GCTACTTTGGCTGGTGTCTCT 59.997 52.381 0.00 0.00 0.00 3.10
1166 1625 1.002544 AGCTACTTTGGCTGGTGTCTC 59.997 52.381 0.00 0.00 38.73 3.36
1167 1626 1.059913 AGCTACTTTGGCTGGTGTCT 58.940 50.000 0.00 0.00 38.73 3.41
1168 1627 2.622436 CTAGCTACTTTGGCTGGTGTC 58.378 52.381 0.00 0.00 40.52 3.67
1186 1645 1.728069 CTTGACGGCGAGCTAGCTA 59.272 57.895 19.38 0.00 37.29 3.32
1187 1646 2.492090 CTTGACGGCGAGCTAGCT 59.508 61.111 19.45 19.45 37.29 3.32
1188 1647 3.258290 GCTTGACGGCGAGCTAGC 61.258 66.667 24.03 18.31 46.18 3.42
1387 1854 2.705826 GCAGCAGATGCGTAGTGC 59.294 61.111 0.00 4.83 46.99 4.40
1403 1870 2.125188 GAGAGGCACTGCAGGAGC 60.125 66.667 19.93 20.62 41.55 4.70
1404 1871 1.079266 GTGAGAGGCACTGCAGGAG 60.079 63.158 19.93 11.42 44.27 3.69
1405 1872 3.063526 GTGAGAGGCACTGCAGGA 58.936 61.111 19.93 0.00 44.27 3.86
1424 1891 3.070734 GCTCCATGGAAGCTATCTCAGAA 59.929 47.826 17.00 0.00 0.00 3.02
1572 2051 1.099879 GCAGGGAGGACATGACATGC 61.100 60.000 15.49 8.15 0.00 4.06
1579 2058 3.745480 CGTTTATCATGCAGGGAGGACAT 60.745 47.826 0.00 0.00 0.00 3.06
1582 2061 2.115427 TCGTTTATCATGCAGGGAGGA 58.885 47.619 0.00 0.00 0.00 3.71
1583 2062 2.620251 TCGTTTATCATGCAGGGAGG 57.380 50.000 0.00 0.00 0.00 4.30
1594 2073 6.692681 AGCACATGCAATACATTTCGTTTATC 59.307 34.615 6.64 0.00 45.16 1.75
1597 2076 4.808558 AGCACATGCAATACATTTCGTTT 58.191 34.783 6.64 0.00 45.16 3.60
1607 2092 7.546358 AGCAGTAAAAATAAGCACATGCAATA 58.454 30.769 6.64 0.00 45.16 1.90
1610 2095 5.389859 AGCAGTAAAAATAAGCACATGCA 57.610 34.783 6.64 0.00 45.16 3.96
1630 2124 8.895845 CATTCAAAAGCACGTTTCATATATAGC 58.104 33.333 0.00 0.00 0.00 2.97
1647 2155 4.384846 ACGCACGTAGTAGACATTCAAAAG 59.615 41.667 0.00 0.00 41.61 2.27
1778 2286 1.750930 CAGTCTGTGACCTGGCAGT 59.249 57.895 14.43 1.17 34.57 4.40
1837 2347 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1862 2671 5.445806 GCAACATTTTCCAAGAAACACACAC 60.446 40.000 0.00 0.00 0.00 3.82
1863 2672 4.629200 GCAACATTTTCCAAGAAACACACA 59.371 37.500 0.00 0.00 0.00 3.72
1864 2673 4.869861 AGCAACATTTTCCAAGAAACACAC 59.130 37.500 0.00 0.00 0.00 3.82
1937 2749 5.936686 AGAACTTAACCCGTTTTCTAAGC 57.063 39.130 0.00 0.00 0.00 3.09
1987 2809 1.731433 ATCCGCCTGCACGTACGTAT 61.731 55.000 22.34 5.34 0.00 3.06
2117 2939 2.906897 GGCCCCGGCACATACATG 60.907 66.667 8.23 0.00 44.11 3.21
2160 2982 6.695713 CGTAGTGCATATATGTACACACAACT 59.304 38.462 28.53 13.45 44.40 3.16
2179 3001 1.432251 CACGAGGGCCTACGTAGTG 59.568 63.158 23.85 16.88 45.73 2.74
2181 3003 2.412112 GCACGAGGGCCTACGTAG 59.588 66.667 23.85 15.92 40.76 3.51
2231 3053 2.013286 TCGTTTTCGCTTTCGCTTTC 57.987 45.000 0.00 0.00 43.73 2.62
2232 3054 2.286772 ACATCGTTTTCGCTTTCGCTTT 60.287 40.909 0.00 0.00 43.73 3.51
2233 3055 1.263217 ACATCGTTTTCGCTTTCGCTT 59.737 42.857 0.00 0.00 43.73 4.68
2234 3056 0.865769 ACATCGTTTTCGCTTTCGCT 59.134 45.000 0.00 0.00 43.73 4.93
2235 3057 0.967803 CACATCGTTTTCGCTTTCGC 59.032 50.000 0.00 0.00 43.73 4.70
2236 3058 2.294479 ACACATCGTTTTCGCTTTCG 57.706 45.000 0.00 0.00 43.73 3.46
2237 3059 4.769215 AGTTACACATCGTTTTCGCTTTC 58.231 39.130 0.00 0.00 43.73 2.62
2238 3060 4.806342 AGTTACACATCGTTTTCGCTTT 57.194 36.364 0.00 0.00 43.73 3.51
2239 3061 7.585286 TTATAGTTACACATCGTTTTCGCTT 57.415 32.000 0.00 0.00 43.73 4.68
2638 3483 2.412089 GGAACGCTCGATATTACATGCC 59.588 50.000 0.00 0.00 0.00 4.40
2880 3733 1.801765 GCAAGCTGTACTAGGCGTACC 60.802 57.143 0.00 0.00 46.36 3.34
2885 3738 1.084370 CACGGCAAGCTGTACTAGGC 61.084 60.000 6.16 0.00 33.65 3.93
2912 3765 6.096695 GCGCCCATCTTTTACTTTCATTTTA 58.903 36.000 0.00 0.00 0.00 1.52
2923 3776 0.321741 TGGTTCGCGCCCATCTTTTA 60.322 50.000 12.56 0.00 0.00 1.52
2931 3784 1.648504 GGTATATATGGTTCGCGCCC 58.351 55.000 0.00 4.13 0.00 6.13
2939 3792 5.780793 GTCCAAGTGAGAGGGTATATATGGT 59.219 44.000 0.00 0.00 0.00 3.55
2940 3793 5.187967 GGTCCAAGTGAGAGGGTATATATGG 59.812 48.000 0.00 0.00 0.00 2.74
2941 3794 5.187967 GGGTCCAAGTGAGAGGGTATATATG 59.812 48.000 0.00 0.00 0.00 1.78
2942 3795 5.162760 TGGGTCCAAGTGAGAGGGTATATAT 60.163 44.000 0.00 0.00 0.00 0.86
2943 3796 4.171243 TGGGTCCAAGTGAGAGGGTATATA 59.829 45.833 0.00 0.00 0.00 0.86
2944 3797 3.051341 TGGGTCCAAGTGAGAGGGTATAT 60.051 47.826 0.00 0.00 0.00 0.86
2945 3798 2.316677 TGGGTCCAAGTGAGAGGGTATA 59.683 50.000 0.00 0.00 0.00 1.47
2946 3799 1.080498 TGGGTCCAAGTGAGAGGGTAT 59.920 52.381 0.00 0.00 0.00 2.73
2947 3800 0.490017 TGGGTCCAAGTGAGAGGGTA 59.510 55.000 0.00 0.00 0.00 3.69
2958 3820 0.823356 GCTCAAGCTTGTGGGTCCAA 60.823 55.000 25.19 3.24 38.21 3.53
2987 3851 1.416401 GCCCCAGACGAGGAAATCATA 59.584 52.381 0.00 0.00 0.00 2.15
2991 3855 2.680370 GGGCCCCAGACGAGGAAAT 61.680 63.158 12.23 0.00 0.00 2.17
2994 3858 1.365894 TATAGGGCCCCAGACGAGGA 61.366 60.000 21.43 0.00 0.00 3.71
2998 3862 1.803366 GACGTATAGGGCCCCAGACG 61.803 65.000 31.57 31.57 33.51 4.18
2999 3863 1.470165 GGACGTATAGGGCCCCAGAC 61.470 65.000 21.43 12.51 0.00 3.51
3005 3869 3.308705 CCCCGGACGTATAGGGCC 61.309 72.222 0.73 7.29 43.74 5.80
3012 3876 3.376078 GTCACTGCCCCGGACGTA 61.376 66.667 0.73 0.00 0.00 3.57
3017 3881 1.227943 CATATGGTCACTGCCCCGG 60.228 63.158 0.00 0.00 0.00 5.73
3022 3886 2.546494 GCGGGCATATGGTCACTGC 61.546 63.158 4.56 0.00 35.16 4.40
3023 3887 1.153188 TGCGGGCATATGGTCACTG 60.153 57.895 4.56 0.00 0.00 3.66
3024 3888 1.153168 GTGCGGGCATATGGTCACT 60.153 57.895 4.56 0.00 0.00 3.41
3025 3889 2.186826 GGTGCGGGCATATGGTCAC 61.187 63.158 4.56 1.66 0.00 3.67
3026 3890 2.191908 GGTGCGGGCATATGGTCA 59.808 61.111 4.56 0.00 0.00 4.02
3027 3891 2.594592 GGGTGCGGGCATATGGTC 60.595 66.667 4.56 0.00 0.00 4.02
3028 3892 2.506884 TTTGGGTGCGGGCATATGGT 62.507 55.000 4.56 0.00 0.00 3.55
3029 3893 1.114722 ATTTGGGTGCGGGCATATGG 61.115 55.000 4.56 0.00 0.00 2.74
3030 3894 0.752054 AATTTGGGTGCGGGCATATG 59.248 50.000 0.00 0.00 0.00 1.78
3031 3895 1.039856 GAATTTGGGTGCGGGCATAT 58.960 50.000 0.00 0.00 0.00 1.78
3032 3896 0.323816 TGAATTTGGGTGCGGGCATA 60.324 50.000 0.00 0.00 0.00 3.14
3033 3897 0.977108 ATGAATTTGGGTGCGGGCAT 60.977 50.000 0.00 0.00 0.00 4.40
3034 3898 0.323816 TATGAATTTGGGTGCGGGCA 60.324 50.000 0.00 0.00 0.00 5.36
3035 3899 0.102300 GTATGAATTTGGGTGCGGGC 59.898 55.000 0.00 0.00 0.00 6.13
3036 3900 1.676006 GAGTATGAATTTGGGTGCGGG 59.324 52.381 0.00 0.00 0.00 6.13
3037 3901 1.676006 GGAGTATGAATTTGGGTGCGG 59.324 52.381 0.00 0.00 0.00 5.69
3038 3902 1.676006 GGGAGTATGAATTTGGGTGCG 59.324 52.381 0.00 0.00 0.00 5.34
3039 3903 2.952310 GAGGGAGTATGAATTTGGGTGC 59.048 50.000 0.00 0.00 0.00 5.01
3040 3904 3.555966 GGAGGGAGTATGAATTTGGGTG 58.444 50.000 0.00 0.00 0.00 4.61
3041 3905 2.172717 CGGAGGGAGTATGAATTTGGGT 59.827 50.000 0.00 0.00 0.00 4.51
3042 3906 2.172717 ACGGAGGGAGTATGAATTTGGG 59.827 50.000 0.00 0.00 0.00 4.12
3043 3907 3.467803 GACGGAGGGAGTATGAATTTGG 58.532 50.000 0.00 0.00 0.00 3.28
3044 3908 3.467803 GGACGGAGGGAGTATGAATTTG 58.532 50.000 0.00 0.00 0.00 2.32
3045 3909 2.102588 CGGACGGAGGGAGTATGAATTT 59.897 50.000 0.00 0.00 0.00 1.82
3046 3910 1.687123 CGGACGGAGGGAGTATGAATT 59.313 52.381 0.00 0.00 0.00 2.17
3047 3911 1.329256 CGGACGGAGGGAGTATGAAT 58.671 55.000 0.00 0.00 0.00 2.57
3048 3912 0.033796 ACGGACGGAGGGAGTATGAA 60.034 55.000 0.00 0.00 0.00 2.57
3049 3913 0.839277 TACGGACGGAGGGAGTATGA 59.161 55.000 0.00 0.00 0.00 2.15
3050 3914 1.683943 TTACGGACGGAGGGAGTATG 58.316 55.000 0.00 0.00 0.00 2.39
3051 3915 2.442236 TTTACGGACGGAGGGAGTAT 57.558 50.000 0.00 0.00 0.00 2.12
3052 3916 2.442236 ATTTACGGACGGAGGGAGTA 57.558 50.000 0.00 0.00 0.00 2.59
3053 3917 2.027385 GTATTTACGGACGGAGGGAGT 58.973 52.381 0.00 0.00 0.00 3.85
3054 3918 2.305009 AGTATTTACGGACGGAGGGAG 58.695 52.381 0.00 0.00 0.00 4.30
3055 3919 2.428171 CAAGTATTTACGGACGGAGGGA 59.572 50.000 0.00 0.00 0.00 4.20
3056 3920 2.167075 ACAAGTATTTACGGACGGAGGG 59.833 50.000 0.00 0.00 0.00 4.30
3057 3921 3.119388 TGACAAGTATTTACGGACGGAGG 60.119 47.826 0.00 0.00 0.00 4.30
3058 3922 4.100707 TGACAAGTATTTACGGACGGAG 57.899 45.455 0.00 0.00 0.00 4.63
3059 3923 4.158209 TGATGACAAGTATTTACGGACGGA 59.842 41.667 0.00 0.00 0.00 4.69
3060 3924 4.426416 TGATGACAAGTATTTACGGACGG 58.574 43.478 0.00 0.00 0.00 4.79
3061 3925 6.397831 TTTGATGACAAGTATTTACGGACG 57.602 37.500 0.00 0.00 37.32 4.79
3062 3926 8.447833 TCATTTTGATGACAAGTATTTACGGAC 58.552 33.333 0.00 0.00 37.32 4.79
3063 3927 8.554835 TCATTTTGATGACAAGTATTTACGGA 57.445 30.769 0.00 0.00 37.32 4.69
3064 3928 9.787532 AATCATTTTGATGACAAGTATTTACGG 57.212 29.630 0.00 0.00 37.15 4.02
3143 4007 9.976255 CGTCCGAAAATACTTGTCATTAAAATA 57.024 29.630 0.00 0.00 0.00 1.40
3144 4008 7.966204 CCGTCCGAAAATACTTGTCATTAAAAT 59.034 33.333 0.00 0.00 0.00 1.82
3145 4009 7.172875 TCCGTCCGAAAATACTTGTCATTAAAA 59.827 33.333 0.00 0.00 0.00 1.52
3146 4010 6.649973 TCCGTCCGAAAATACTTGTCATTAAA 59.350 34.615 0.00 0.00 0.00 1.52
3147 4011 6.164876 TCCGTCCGAAAATACTTGTCATTAA 58.835 36.000 0.00 0.00 0.00 1.40
3148 4012 5.722263 TCCGTCCGAAAATACTTGTCATTA 58.278 37.500 0.00 0.00 0.00 1.90
3149 4013 4.571919 TCCGTCCGAAAATACTTGTCATT 58.428 39.130 0.00 0.00 0.00 2.57
3150 4014 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
3151 4015 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
3152 4016 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3153 4017 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3154 4018 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3155 4019 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
3156 4020 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
3157 4021 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
3158 4022 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
3159 4023 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
3160 4024 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
3161 4025 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
3162 4026 0.251297 TTGTACTCCCTCCGTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
3163 4027 0.251297 TTTGTACTCCCTCCGTCCGA 60.251 55.000 0.00 0.00 0.00 4.55
3164 4028 0.604578 TTTTGTACTCCCTCCGTCCG 59.395 55.000 0.00 0.00 0.00 4.79
3165 4029 1.345415 TGTTTTGTACTCCCTCCGTCC 59.655 52.381 0.00 0.00 0.00 4.79
3166 4030 2.825861 TGTTTTGTACTCCCTCCGTC 57.174 50.000 0.00 0.00 0.00 4.79
3167 4031 2.874457 GCATGTTTTGTACTCCCTCCGT 60.874 50.000 0.00 0.00 0.00 4.69
3168 4032 1.737793 GCATGTTTTGTACTCCCTCCG 59.262 52.381 0.00 0.00 0.00 4.63
3169 4033 2.749621 CTGCATGTTTTGTACTCCCTCC 59.250 50.000 0.00 0.00 0.00 4.30
3170 4034 3.674997 TCTGCATGTTTTGTACTCCCTC 58.325 45.455 0.00 0.00 0.00 4.30
3171 4035 3.560025 CCTCTGCATGTTTTGTACTCCCT 60.560 47.826 0.00 0.00 0.00 4.20
3172 4036 2.749621 CCTCTGCATGTTTTGTACTCCC 59.250 50.000 0.00 0.00 0.00 4.30
3173 4037 3.412386 ACCTCTGCATGTTTTGTACTCC 58.588 45.455 0.00 0.00 0.00 3.85
3174 4038 5.479306 TCTACCTCTGCATGTTTTGTACTC 58.521 41.667 0.00 0.00 0.00 2.59
3175 4039 5.483685 TCTACCTCTGCATGTTTTGTACT 57.516 39.130 0.00 0.00 0.00 2.73
3176 4040 5.874810 TGATCTACCTCTGCATGTTTTGTAC 59.125 40.000 0.00 0.00 0.00 2.90
3177 4041 6.048732 TGATCTACCTCTGCATGTTTTGTA 57.951 37.500 0.00 0.00 0.00 2.41
3178 4042 4.910195 TGATCTACCTCTGCATGTTTTGT 58.090 39.130 0.00 0.00 0.00 2.83
3179 4043 5.220989 CCATGATCTACCTCTGCATGTTTTG 60.221 44.000 0.00 0.00 35.71 2.44
3180 4044 4.885907 CCATGATCTACCTCTGCATGTTTT 59.114 41.667 0.00 0.00 35.71 2.43
3181 4045 4.458397 CCATGATCTACCTCTGCATGTTT 58.542 43.478 0.00 0.00 35.71 2.83
3182 4046 3.746751 GCCATGATCTACCTCTGCATGTT 60.747 47.826 0.00 0.00 35.71 2.71
3183 4047 2.224475 GCCATGATCTACCTCTGCATGT 60.224 50.000 0.00 0.00 35.71 3.21
3184 4048 2.224450 TGCCATGATCTACCTCTGCATG 60.224 50.000 0.00 0.00 36.87 4.06
3185 4049 2.052468 TGCCATGATCTACCTCTGCAT 58.948 47.619 0.00 0.00 0.00 3.96
3186 4050 1.499368 TGCCATGATCTACCTCTGCA 58.501 50.000 0.00 0.00 0.00 4.41
3187 4051 2.216898 GTTGCCATGATCTACCTCTGC 58.783 52.381 0.00 0.00 0.00 4.26
3188 4052 3.548745 TGTTGCCATGATCTACCTCTG 57.451 47.619 0.00 0.00 0.00 3.35
3189 4053 5.150715 TCTATGTTGCCATGATCTACCTCT 58.849 41.667 0.00 0.00 32.29 3.69
3190 4054 5.474578 TCTATGTTGCCATGATCTACCTC 57.525 43.478 0.00 0.00 32.29 3.85
3191 4055 5.894298 TTCTATGTTGCCATGATCTACCT 57.106 39.130 0.00 0.00 32.29 3.08
3192 4056 8.798859 ATATTTCTATGTTGCCATGATCTACC 57.201 34.615 0.00 0.00 32.29 3.18
3195 4059 9.887629 CTCTATATTTCTATGTTGCCATGATCT 57.112 33.333 0.00 0.00 32.29 2.75
3196 4060 8.610896 GCTCTATATTTCTATGTTGCCATGATC 58.389 37.037 0.00 0.00 32.29 2.92
3197 4061 8.105197 TGCTCTATATTTCTATGTTGCCATGAT 58.895 33.333 0.00 0.00 32.29 2.45
3198 4062 7.388776 GTGCTCTATATTTCTATGTTGCCATGA 59.611 37.037 0.00 0.00 32.29 3.07
3199 4063 7.173735 TGTGCTCTATATTTCTATGTTGCCATG 59.826 37.037 0.00 0.00 32.29 3.66
3200 4064 7.173907 GTGTGCTCTATATTTCTATGTTGCCAT 59.826 37.037 0.00 0.00 34.97 4.40
3201 4065 6.483307 GTGTGCTCTATATTTCTATGTTGCCA 59.517 38.462 0.00 0.00 0.00 4.92
3202 4066 6.708054 AGTGTGCTCTATATTTCTATGTTGCC 59.292 38.462 0.00 0.00 0.00 4.52
3203 4067 7.358765 CGAGTGTGCTCTATATTTCTATGTTGC 60.359 40.741 0.00 0.00 39.53 4.17
3204 4068 7.115520 CCGAGTGTGCTCTATATTTCTATGTTG 59.884 40.741 0.00 0.00 39.53 3.33
3205 4069 7.148641 CCGAGTGTGCTCTATATTTCTATGTT 58.851 38.462 0.00 0.00 39.53 2.71
3206 4070 6.294787 CCCGAGTGTGCTCTATATTTCTATGT 60.295 42.308 0.00 0.00 39.53 2.29
3207 4071 6.096036 CCCGAGTGTGCTCTATATTTCTATG 58.904 44.000 0.00 0.00 39.53 2.23
3208 4072 5.336849 GCCCGAGTGTGCTCTATATTTCTAT 60.337 44.000 0.00 0.00 39.53 1.98
3209 4073 4.022242 GCCCGAGTGTGCTCTATATTTCTA 60.022 45.833 0.00 0.00 39.53 2.10
3210 4074 3.243907 GCCCGAGTGTGCTCTATATTTCT 60.244 47.826 0.00 0.00 39.53 2.52
3211 4075 3.060602 GCCCGAGTGTGCTCTATATTTC 58.939 50.000 0.00 0.00 39.53 2.17
3212 4076 2.434336 TGCCCGAGTGTGCTCTATATTT 59.566 45.455 0.00 0.00 39.53 1.40
3213 4077 2.039418 TGCCCGAGTGTGCTCTATATT 58.961 47.619 0.00 0.00 39.53 1.28
3214 4078 1.704641 TGCCCGAGTGTGCTCTATAT 58.295 50.000 0.00 0.00 39.53 0.86
3215 4079 1.704641 ATGCCCGAGTGTGCTCTATA 58.295 50.000 0.00 0.00 39.53 1.31
3216 4080 1.615883 CTATGCCCGAGTGTGCTCTAT 59.384 52.381 0.00 0.00 39.53 1.98
3217 4081 1.032794 CTATGCCCGAGTGTGCTCTA 58.967 55.000 0.00 0.00 39.53 2.43
3218 4082 0.684479 TCTATGCCCGAGTGTGCTCT 60.684 55.000 0.00 0.00 39.53 4.09
3219 4083 0.390860 ATCTATGCCCGAGTGTGCTC 59.609 55.000 0.00 0.00 38.35 4.26
3220 4084 0.390860 GATCTATGCCCGAGTGTGCT 59.609 55.000 0.00 0.00 0.00 4.40
3221 4085 0.601311 GGATCTATGCCCGAGTGTGC 60.601 60.000 0.00 0.00 0.00 4.57
3222 4086 0.752658 TGGATCTATGCCCGAGTGTG 59.247 55.000 0.00 0.00 0.00 3.82
3223 4087 0.753262 GTGGATCTATGCCCGAGTGT 59.247 55.000 0.00 0.00 0.00 3.55
3224 4088 0.752658 TGTGGATCTATGCCCGAGTG 59.247 55.000 0.00 0.00 0.00 3.51
3225 4089 1.620819 GATGTGGATCTATGCCCGAGT 59.379 52.381 0.00 0.00 0.00 4.18
3226 4090 1.898472 AGATGTGGATCTATGCCCGAG 59.102 52.381 0.00 0.00 37.15 4.63
3227 4091 2.015456 AGATGTGGATCTATGCCCGA 57.985 50.000 0.00 0.00 37.15 5.14
3228 4092 5.538053 AGATATAGATGTGGATCTATGCCCG 59.462 44.000 12.79 0.00 46.96 6.13
3229 4093 6.992664 AGATATAGATGTGGATCTATGCCC 57.007 41.667 12.79 4.45 46.96 5.36
3255 4119 8.502738 TGCCCCTTTGAGTCTTTTTATATAGAT 58.497 33.333 0.00 0.00 0.00 1.98
3256 4120 7.867921 TGCCCCTTTGAGTCTTTTTATATAGA 58.132 34.615 0.00 0.00 0.00 1.98
3257 4121 7.993183 TCTGCCCCTTTGAGTCTTTTTATATAG 59.007 37.037 0.00 0.00 0.00 1.31
3258 4122 7.867921 TCTGCCCCTTTGAGTCTTTTTATATA 58.132 34.615 0.00 0.00 0.00 0.86
3259 4123 6.731467 TCTGCCCCTTTGAGTCTTTTTATAT 58.269 36.000 0.00 0.00 0.00 0.86
3260 4124 6.134535 TCTGCCCCTTTGAGTCTTTTTATA 57.865 37.500 0.00 0.00 0.00 0.98
3261 4125 4.998051 TCTGCCCCTTTGAGTCTTTTTAT 58.002 39.130 0.00 0.00 0.00 1.40
3262 4126 4.447138 TCTGCCCCTTTGAGTCTTTTTA 57.553 40.909 0.00 0.00 0.00 1.52
3263 4127 3.312736 TCTGCCCCTTTGAGTCTTTTT 57.687 42.857 0.00 0.00 0.00 1.94
3264 4128 3.425659 GATCTGCCCCTTTGAGTCTTTT 58.574 45.455 0.00 0.00 0.00 2.27
3265 4129 2.291217 GGATCTGCCCCTTTGAGTCTTT 60.291 50.000 0.00 0.00 0.00 2.52
3266 4130 1.283321 GGATCTGCCCCTTTGAGTCTT 59.717 52.381 0.00 0.00 0.00 3.01
3267 4131 0.915364 GGATCTGCCCCTTTGAGTCT 59.085 55.000 0.00 0.00 0.00 3.24
3268 4132 0.620556 TGGATCTGCCCCTTTGAGTC 59.379 55.000 0.00 0.00 34.97 3.36
3269 4133 1.075601 TTGGATCTGCCCCTTTGAGT 58.924 50.000 0.00 0.00 34.97 3.41
3270 4134 2.449137 ATTGGATCTGCCCCTTTGAG 57.551 50.000 0.00 0.00 34.97 3.02
3271 4135 2.925966 AATTGGATCTGCCCCTTTGA 57.074 45.000 0.00 0.00 34.97 2.69
3272 4136 4.897670 AGATTAATTGGATCTGCCCCTTTG 59.102 41.667 5.62 0.00 32.79 2.77
3273 4137 5.143369 GAGATTAATTGGATCTGCCCCTTT 58.857 41.667 9.96 0.00 34.13 3.11
3274 4138 4.734266 GAGATTAATTGGATCTGCCCCTT 58.266 43.478 9.96 0.00 34.13 3.95
3275 4139 3.244700 CGAGATTAATTGGATCTGCCCCT 60.245 47.826 9.96 0.00 34.13 4.79
3276 4140 3.077359 CGAGATTAATTGGATCTGCCCC 58.923 50.000 9.96 0.00 34.13 5.80
3277 4141 3.077359 CCGAGATTAATTGGATCTGCCC 58.923 50.000 9.96 0.00 34.13 5.36
3278 4142 2.485814 GCCGAGATTAATTGGATCTGCC 59.514 50.000 9.96 0.00 34.13 4.85
3279 4143 2.485814 GGCCGAGATTAATTGGATCTGC 59.514 50.000 9.96 8.37 34.13 4.26
3280 4144 3.743521 TGGCCGAGATTAATTGGATCTG 58.256 45.455 9.96 4.52 34.13 2.90
3281 4145 4.042062 TGATGGCCGAGATTAATTGGATCT 59.958 41.667 0.00 6.01 36.60 2.75
3282 4146 4.326826 TGATGGCCGAGATTAATTGGATC 58.673 43.478 0.00 0.00 0.00 3.36
3283 4147 4.371624 TGATGGCCGAGATTAATTGGAT 57.628 40.909 0.00 0.00 0.00 3.41
3284 4148 3.855255 TGATGGCCGAGATTAATTGGA 57.145 42.857 0.00 0.00 0.00 3.53
3285 4149 4.916983 TTTGATGGCCGAGATTAATTGG 57.083 40.909 0.00 0.00 0.00 3.16
3286 4150 6.075762 TGATTTGATGGCCGAGATTAATTG 57.924 37.500 0.00 0.00 0.00 2.32
3287 4151 6.906157 ATGATTTGATGGCCGAGATTAATT 57.094 33.333 0.00 0.00 0.00 1.40
3288 4152 7.830697 TGATATGATTTGATGGCCGAGATTAAT 59.169 33.333 0.00 0.00 0.00 1.40
3289 4153 7.167535 TGATATGATTTGATGGCCGAGATTAA 58.832 34.615 0.00 0.00 0.00 1.40
3290 4154 6.710278 TGATATGATTTGATGGCCGAGATTA 58.290 36.000 0.00 0.00 0.00 1.75
3291 4155 5.563592 TGATATGATTTGATGGCCGAGATT 58.436 37.500 0.00 0.00 0.00 2.40
3292 4156 5.169992 TGATATGATTTGATGGCCGAGAT 57.830 39.130 0.00 0.00 0.00 2.75
3293 4157 4.622260 TGATATGATTTGATGGCCGAGA 57.378 40.909 0.00 0.00 0.00 4.04
3294 4158 5.163683 GGATTGATATGATTTGATGGCCGAG 60.164 44.000 0.00 0.00 0.00 4.63
3295 4159 4.701651 GGATTGATATGATTTGATGGCCGA 59.298 41.667 0.00 0.00 0.00 5.54
3296 4160 4.460034 TGGATTGATATGATTTGATGGCCG 59.540 41.667 0.00 0.00 0.00 6.13
3297 4161 5.988310 TGGATTGATATGATTTGATGGCC 57.012 39.130 0.00 0.00 0.00 5.36
3298 4162 5.860182 CGTTGGATTGATATGATTTGATGGC 59.140 40.000 0.00 0.00 0.00 4.40
3299 4163 7.080099 GTCGTTGGATTGATATGATTTGATGG 58.920 38.462 0.00 0.00 0.00 3.51
3300 4164 7.040892 AGGTCGTTGGATTGATATGATTTGATG 60.041 37.037 0.00 0.00 0.00 3.07
3301 4165 7.000472 AGGTCGTTGGATTGATATGATTTGAT 59.000 34.615 0.00 0.00 0.00 2.57
3302 4166 6.356556 AGGTCGTTGGATTGATATGATTTGA 58.643 36.000 0.00 0.00 0.00 2.69
3303 4167 6.624352 AGGTCGTTGGATTGATATGATTTG 57.376 37.500 0.00 0.00 0.00 2.32
3304 4168 7.657761 GTCTAGGTCGTTGGATTGATATGATTT 59.342 37.037 0.00 0.00 0.00 2.17
3305 4169 7.015682 AGTCTAGGTCGTTGGATTGATATGATT 59.984 37.037 0.00 0.00 0.00 2.57
3306 4170 6.495181 AGTCTAGGTCGTTGGATTGATATGAT 59.505 38.462 0.00 0.00 0.00 2.45
3307 4171 5.833667 AGTCTAGGTCGTTGGATTGATATGA 59.166 40.000 0.00 0.00 0.00 2.15
3308 4172 5.923114 CAGTCTAGGTCGTTGGATTGATATG 59.077 44.000 0.00 0.00 0.00 1.78
3309 4173 5.509840 GCAGTCTAGGTCGTTGGATTGATAT 60.510 44.000 0.00 0.00 0.00 1.63
3310 4174 4.202121 GCAGTCTAGGTCGTTGGATTGATA 60.202 45.833 0.00 0.00 0.00 2.15
3311 4175 3.430929 GCAGTCTAGGTCGTTGGATTGAT 60.431 47.826 0.00 0.00 0.00 2.57
3312 4176 2.094182 GCAGTCTAGGTCGTTGGATTGA 60.094 50.000 0.00 0.00 0.00 2.57
3313 4177 2.093973 AGCAGTCTAGGTCGTTGGATTG 60.094 50.000 0.00 0.00 0.00 2.67
3314 4178 2.166664 GAGCAGTCTAGGTCGTTGGATT 59.833 50.000 0.00 0.00 0.00 3.01
3315 4179 1.751924 GAGCAGTCTAGGTCGTTGGAT 59.248 52.381 0.00 0.00 0.00 3.41
3316 4180 1.174783 GAGCAGTCTAGGTCGTTGGA 58.825 55.000 0.00 0.00 0.00 3.53
3317 4181 0.173708 GGAGCAGTCTAGGTCGTTGG 59.826 60.000 0.00 0.00 36.90 3.77
3318 4182 0.888619 TGGAGCAGTCTAGGTCGTTG 59.111 55.000 0.00 0.00 36.90 4.10
3319 4183 1.629043 TTGGAGCAGTCTAGGTCGTT 58.371 50.000 0.00 0.00 36.90 3.85
3320 4184 1.478510 CATTGGAGCAGTCTAGGTCGT 59.521 52.381 0.00 0.00 36.90 4.34
3321 4185 1.478510 ACATTGGAGCAGTCTAGGTCG 59.521 52.381 0.00 0.00 36.90 4.79
3322 4186 2.480416 CGACATTGGAGCAGTCTAGGTC 60.480 54.545 0.00 0.00 35.36 3.85
3323 4187 1.478510 CGACATTGGAGCAGTCTAGGT 59.521 52.381 0.00 0.00 0.00 3.08
3324 4188 1.751351 TCGACATTGGAGCAGTCTAGG 59.249 52.381 0.00 0.00 0.00 3.02
3325 4189 3.077229 CTCGACATTGGAGCAGTCTAG 57.923 52.381 0.00 0.00 0.00 2.43
3333 4197 0.737367 TTGAGCGCTCGACATTGGAG 60.737 55.000 30.75 0.00 34.62 3.86
3334 4198 1.014044 GTTGAGCGCTCGACATTGGA 61.014 55.000 40.41 17.90 42.27 3.53
3335 4199 1.291184 TGTTGAGCGCTCGACATTGG 61.291 55.000 42.95 0.00 46.09 3.16
3336 4200 2.153039 TGTTGAGCGCTCGACATTG 58.847 52.632 42.95 0.00 46.09 2.82
3337 4201 4.673403 TGTTGAGCGCTCGACATT 57.327 50.000 42.95 9.77 46.09 2.71
3340 4204 1.818221 AAACGTGTTGAGCGCTCGAC 61.818 55.000 39.44 39.44 42.86 4.20
3341 4205 0.318022 TAAACGTGTTGAGCGCTCGA 60.318 50.000 30.75 27.40 0.00 4.04
3342 4206 0.091344 CTAAACGTGTTGAGCGCTCG 59.909 55.000 30.75 21.89 0.00 5.03
3343 4207 0.179248 GCTAAACGTGTTGAGCGCTC 60.179 55.000 30.42 30.42 37.32 5.03
3344 4208 1.860078 GCTAAACGTGTTGAGCGCT 59.140 52.632 11.27 11.27 37.32 5.92
3345 4209 4.417240 GCTAAACGTGTTGAGCGC 57.583 55.556 6.34 0.00 37.32 5.92
3356 4220 5.220024 GCATGAAATTAACTGCACGCTAAAC 60.220 40.000 0.00 0.00 34.77 2.01
3357 4221 4.856487 GCATGAAATTAACTGCACGCTAAA 59.144 37.500 0.00 0.00 34.77 1.85
3358 4222 4.083057 TGCATGAAATTAACTGCACGCTAA 60.083 37.500 0.00 0.00 39.54 3.09
3359 4223 3.438434 TGCATGAAATTAACTGCACGCTA 59.562 39.130 0.00 0.00 39.54 4.26
3360 4224 2.228582 TGCATGAAATTAACTGCACGCT 59.771 40.909 0.00 0.00 39.54 5.07
3361 4225 2.594321 TGCATGAAATTAACTGCACGC 58.406 42.857 0.00 0.00 39.54 5.34
3362 4226 5.573296 TTTTGCATGAAATTAACTGCACG 57.427 34.783 0.00 0.00 43.74 5.34
3373 4237 9.734620 GTGATTAGCACTATATTTTGCATGAAA 57.265 29.630 0.00 0.00 44.27 2.69
3390 4254 6.670077 TTGCGTGTTATTATGTGATTAGCA 57.330 33.333 0.00 0.00 0.00 3.49
3391 4255 9.658475 TTATTTGCGTGTTATTATGTGATTAGC 57.342 29.630 0.00 0.00 0.00 3.09
3416 4280 9.672673 GTGCATGTGGATATTAAGTAGGATATT 57.327 33.333 0.00 0.00 0.00 1.28
3417 4281 9.051259 AGTGCATGTGGATATTAAGTAGGATAT 57.949 33.333 0.00 0.00 0.00 1.63
3418 4282 8.435931 AGTGCATGTGGATATTAAGTAGGATA 57.564 34.615 0.00 0.00 0.00 2.59
3419 4283 7.321717 AGTGCATGTGGATATTAAGTAGGAT 57.678 36.000 0.00 0.00 0.00 3.24
3420 4284 6.747414 AGTGCATGTGGATATTAAGTAGGA 57.253 37.500 0.00 0.00 0.00 2.94
3421 4285 8.902540 TTAAGTGCATGTGGATATTAAGTAGG 57.097 34.615 0.00 0.00 0.00 3.18
3431 4295 8.978874 TGAAAGTATATTAAGTGCATGTGGAT 57.021 30.769 0.00 0.00 0.00 3.41
3432 4296 8.800370 TTGAAAGTATATTAAGTGCATGTGGA 57.200 30.769 0.00 0.00 0.00 4.02
3448 4312 9.337091 GTGTAATGCACGTTAATTTGAAAGTAT 57.663 29.630 0.00 0.00 38.45 2.12
3449 4313 8.716619 GTGTAATGCACGTTAATTTGAAAGTA 57.283 30.769 0.00 0.00 38.45 2.24
3450 4314 7.617533 GTGTAATGCACGTTAATTTGAAAGT 57.382 32.000 0.00 0.00 38.45 2.66
3464 4328 5.685841 AGTCAATTTGTACGTGTAATGCAC 58.314 37.500 0.00 0.00 44.36 4.57
3465 4329 5.933187 AGTCAATTTGTACGTGTAATGCA 57.067 34.783 0.00 0.00 0.00 3.96
3466 4330 7.057149 ACTAGTCAATTTGTACGTGTAATGC 57.943 36.000 0.00 0.00 0.00 3.56
3467 4331 9.947897 GTTACTAGTCAATTTGTACGTGTAATG 57.052 33.333 0.00 0.00 0.00 1.90
3468 4332 9.695526 TGTTACTAGTCAATTTGTACGTGTAAT 57.304 29.630 0.00 0.00 0.00 1.89
3469 4333 8.967218 GTGTTACTAGTCAATTTGTACGTGTAA 58.033 33.333 0.00 0.00 0.00 2.41
3470 4334 7.594758 GGTGTTACTAGTCAATTTGTACGTGTA 59.405 37.037 0.00 0.00 0.00 2.90
3471 4335 6.421801 GGTGTTACTAGTCAATTTGTACGTGT 59.578 38.462 0.00 2.27 0.00 4.49
3472 4336 6.128742 GGGTGTTACTAGTCAATTTGTACGTG 60.129 42.308 0.00 0.00 0.00 4.49
3473 4337 5.928264 GGGTGTTACTAGTCAATTTGTACGT 59.072 40.000 0.00 0.00 0.00 3.57
3474 4338 5.927689 TGGGTGTTACTAGTCAATTTGTACG 59.072 40.000 0.00 0.00 0.00 3.67
3475 4339 7.733402 TTGGGTGTTACTAGTCAATTTGTAC 57.267 36.000 0.00 0.00 0.00 2.90
3476 4340 8.749026 TTTTGGGTGTTACTAGTCAATTTGTA 57.251 30.769 0.00 0.00 0.00 2.41
3477 4341 7.558444 TCTTTTGGGTGTTACTAGTCAATTTGT 59.442 33.333 0.00 0.00 0.00 2.83
3478 4342 7.860872 GTCTTTTGGGTGTTACTAGTCAATTTG 59.139 37.037 0.00 0.00 0.00 2.32
3479 4343 7.558444 TGTCTTTTGGGTGTTACTAGTCAATTT 59.442 33.333 0.00 0.00 0.00 1.82
3480 4344 7.057894 TGTCTTTTGGGTGTTACTAGTCAATT 58.942 34.615 0.00 0.00 0.00 2.32
3481 4345 6.597562 TGTCTTTTGGGTGTTACTAGTCAAT 58.402 36.000 0.00 0.00 0.00 2.57
3482 4346 5.991861 TGTCTTTTGGGTGTTACTAGTCAA 58.008 37.500 0.00 0.00 0.00 3.18
3483 4347 5.617528 TGTCTTTTGGGTGTTACTAGTCA 57.382 39.130 0.00 0.00 0.00 3.41
3484 4348 7.384477 ACTATGTCTTTTGGGTGTTACTAGTC 58.616 38.462 0.00 0.00 0.00 2.59
3485 4349 7.312415 ACTATGTCTTTTGGGTGTTACTAGT 57.688 36.000 0.00 0.00 0.00 2.57
3486 4350 9.715121 TTAACTATGTCTTTTGGGTGTTACTAG 57.285 33.333 0.00 0.00 0.00 2.57
3488 4352 8.843262 GTTTAACTATGTCTTTTGGGTGTTACT 58.157 33.333 0.00 0.00 0.00 2.24
3489 4353 8.623030 TGTTTAACTATGTCTTTTGGGTGTTAC 58.377 33.333 0.00 0.00 0.00 2.50
3490 4354 8.749026 TGTTTAACTATGTCTTTTGGGTGTTA 57.251 30.769 0.00 0.00 0.00 2.41
3491 4355 7.648039 TGTTTAACTATGTCTTTTGGGTGTT 57.352 32.000 0.00 0.00 0.00 3.32
3492 4356 7.833285 ATGTTTAACTATGTCTTTTGGGTGT 57.167 32.000 0.00 0.00 0.00 4.16
3493 4357 9.191995 GAAATGTTTAACTATGTCTTTTGGGTG 57.808 33.333 0.00 0.00 0.00 4.61
3494 4358 8.919145 TGAAATGTTTAACTATGTCTTTTGGGT 58.081 29.630 0.00 0.00 0.00 4.51
3495 4359 9.191995 GTGAAATGTTTAACTATGTCTTTTGGG 57.808 33.333 0.00 0.00 0.00 4.12
3496 4360 9.191995 GGTGAAATGTTTAACTATGTCTTTTGG 57.808 33.333 0.00 0.00 0.00 3.28
3497 4361 9.191995 GGGTGAAATGTTTAACTATGTCTTTTG 57.808 33.333 0.00 0.00 0.00 2.44
3498 4362 8.919145 TGGGTGAAATGTTTAACTATGTCTTTT 58.081 29.630 0.00 0.00 0.00 2.27
3499 4363 8.472007 TGGGTGAAATGTTTAACTATGTCTTT 57.528 30.769 0.00 0.00 0.00 2.52
3500 4364 7.942341 TCTGGGTGAAATGTTTAACTATGTCTT 59.058 33.333 0.00 0.00 0.00 3.01
3501 4365 7.458397 TCTGGGTGAAATGTTTAACTATGTCT 58.542 34.615 0.00 0.00 0.00 3.41
3502 4366 7.681939 TCTGGGTGAAATGTTTAACTATGTC 57.318 36.000 0.00 0.00 0.00 3.06
3503 4367 7.176690 CCTTCTGGGTGAAATGTTTAACTATGT 59.823 37.037 0.00 0.00 33.79 2.29
3504 4368 7.538575 CCTTCTGGGTGAAATGTTTAACTATG 58.461 38.462 0.00 0.00 33.79 2.23
3505 4369 6.152831 GCCTTCTGGGTGAAATGTTTAACTAT 59.847 38.462 0.00 0.00 37.43 2.12
3506 4370 5.475564 GCCTTCTGGGTGAAATGTTTAACTA 59.524 40.000 0.00 0.00 37.43 2.24
3507 4371 4.280929 GCCTTCTGGGTGAAATGTTTAACT 59.719 41.667 0.00 0.00 37.43 2.24
3508 4372 4.038642 TGCCTTCTGGGTGAAATGTTTAAC 59.961 41.667 0.00 0.00 37.43 2.01
3509 4373 4.219115 TGCCTTCTGGGTGAAATGTTTAA 58.781 39.130 0.00 0.00 37.43 1.52
3510 4374 3.838565 TGCCTTCTGGGTGAAATGTTTA 58.161 40.909 0.00 0.00 37.43 2.01
3511 4375 2.676748 TGCCTTCTGGGTGAAATGTTT 58.323 42.857 0.00 0.00 37.43 2.83
3512 4376 2.380064 TGCCTTCTGGGTGAAATGTT 57.620 45.000 0.00 0.00 37.43 2.71
3513 4377 2.610438 ATGCCTTCTGGGTGAAATGT 57.390 45.000 0.00 0.00 37.43 2.71
3514 4378 3.624777 ACTATGCCTTCTGGGTGAAATG 58.375 45.455 0.00 0.00 37.43 2.32
3515 4379 4.322057 AACTATGCCTTCTGGGTGAAAT 57.678 40.909 0.00 0.00 37.43 2.17
3516 4380 3.806949 AACTATGCCTTCTGGGTGAAA 57.193 42.857 0.00 0.00 37.43 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.