>input_sequence_48885
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------------------ATGGAGGCGAACCAAGAGAAGGCTCCGGAGACTGCCACCGGCGGCGACGCCCCGAGGCCGGT
GCGAGCGGTGTGCGTCTTCTGCGGCAGCAGGCCTGGCAACCGGCCGTCCTTCAGCGCCGCCGCCCTCGACCTCGGGAAGC
AACTGGTGAGCCAGTACTTAATTAGAGACACCAGCCAAAGTAGCTAGCTAGCTCGCCGTCAAGCTCTGCCCATGTGGTGC
ATGTCTCGCTGACT----TGGTTCTGGACGGCGCACGTACGTACGCG---TCC-TTTGCAGGTGGAGAGGCAGCTCGATC
TCGTCTACGGCGGCGGCAGCGGCGGCCTGATGGGCCTCGTGTCCAAGGCCGTCCACGACGGCGGCCGCCACGTCCTCGGG
TAAAGTCCTACACGCACTACGCATCTGCTGCTCCTGCAGTGCCTCTCACTTTCTGAGATA---GCTTCCATGGAG---CT
ATAGCTTGCAGTTTTACCATAAATAATCGTCTGGCTGCTTGCTCCTGTGTGCAGGGTCATCCCTAGTGCTCTCCTGCCGG
AAGAGGTAGTGCATGCGCGAATCTCTTCTGCCACC-TACA-----CACATGCATGTCATGTCCTCCCTGCATGATA----
--AACGAAATGTATTGCATG---------TGCTTATTTTTACTGCT--------------ATATATGAAACGTGCTTTTG
AATGTCTACTACGTGCGTACGAGCATTTCCTAGGTGTCAGGGGAGACGTTGGGAGAGGTGAAAGTGGTCAGGGACATGCA
TGAGCGCAAGTCAGAAATGGCAAAACACTCGGACGCCTTCATCGCACTGCCAGGTCACAGACTG--CCACTCATCTTAGC
CACTATGTACTACTCGTGTGTGTGTGTGTGTG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTTGGAAAATGTTGCTAATGTGTGACGTTTAAGGTCGACA
TGACATGATAATAACA---AATCAAGAAGCTTAGA-------AAACGGGTTA---AGTTCTTGCGTTGCGGCTCATTTCT
TGTGTAACATACGTACGTGCAGGCGGATATGGGACGATCGAAGAGCTGCTGGAGATCATAACGTGGGCGCAGCTGGGGAT
CCATAACAAACCTGTAAGCTTGTCGTATTTAACTGCCATTCTGCATTATTCCTACATTCATGTATGTGCCGGGGCCAGTG
ATTGGTTAGCCAGATACTAGTAGTTGTGTGTACATATATGCACTACGTAGGCCCTCGTGCCTGCCCTAATCCTCACGCCG
TTCCTAGCTAGCGAAAGCGAAAGCGAAAACGATGTGTAACTATAATTTGGCAACTTACGTACGGTTG---GTGATGTCTC
GTTGCATTAGGTGGGGCTGCTCAACGTGGACGGCTACTACAACAGCCTGCTTTCGCTGTTCGACAAGGGCGTCGAGGAGG
GCTTCATCGACGACGCGGCGCGCAACATCTTCGTCCTCGCCGACAACGCCGCCGACCTGCTCACCAAGCTCACGGCCGCG
GCGGTGGCGGCCCACGTTGACGACGGCGGCGAC---GACCGCAACGGCACGGCGGCCGCCGGCGTCAAGAGGAAAAGAGG
CTAG----------------------------------------------------------------------------
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>chr4D_1_TraesCS4D01G033800
TTAGCAGGCGATAGTACTGGTGGTCCCTAATGTTAAGCTTAGGTTGAATCTCCAGTATGTGTGTATATATGTCACGTTTC
AGAGAGAAACCAGTGTTGGAATGAAAACATTTTTCTTGATGAGATATGTACAGAGATGATTTTCATGATGCAAGTACGAA
TGTAGAATGCAAGGCTCAATTAGAGTCCCTAGTTGTTTCGTTTGTTAGGTTTAGTCCCTTCACTCAAAACCACGTTATGC
AATAATTTAATCAAATTAAATTAAATCTTATAAAAAACACAGCTAAATCAAAACTTTTCTTTATCATATCCTACCCCTAC
CTAAATCAAATCAAATCCTACCAAAACCTCAACTAAATCAAAGCTTT---TTGCATTTCCCTACCCGTACTCAATCG-TA
TCAAATCTTACCAAAATCACTCAACTGGACCCCTACAGATACGATGGGTGTAAGAGCATCTATAACCAGACCCCATATTT
TTTCCTGTAGCGGACAGCCCAGACAGGGGTTAGAAG-AAAAAAAATCACTCAACTGGACCCCTCAAATTGTCCTCATATA
TCCAAGTTTTCCGTGAACCCTTCCTGTCTCTTTTT-------TTTCTCTCTCTTTATCTTCATCAATCATGTGCATGTGA
CTCCACATGGAAAAAAGTAAGGGACATAACTACATGC-ACAAACAAATGAGGGCTCGGAGCGGACACGTCCGGGG-----
-ATGTATCGGGGATCAAATTAGTTTAGTCCGGTTGTAGATGGTCTAAGGTATATGTCGGACACGATTAATATTGAATTAG
AATATGTATATTAGTAGC--------------------------------------------------------------
----------------------TAC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TTTTATAGCAGGCAAGTTAAGCAACGT---GTGTCTGGTGC
ATAAATAGGCGCCGAGGGGACCTCACAA-------GGGCGCCGTCCTCCATAGCAGCAC-----AGCACACCCACCCTCA
TCTTTAGCTCTGCCGAAGCACAAGCA------CCCACCCTCATCTTGGTCTCTCTATCCGTACGCCTCCCCCGTCCCTCC
CTTCACCGTCCGACACACATGGAGGCGAACCAAGAGAAGGCTCCGGAGACTGCCACCGGCGGCGACGCCCCGAGGCCGGT
GCGAGCGGTGTGCGTCTTCTGCGGCAGCAGGCCTGGCAACCGGCCGTCCTTCAGCGCCGCCGCCCTCGACCTCGGGAAGC
AACTGGTGAGCCAGTACTTAATTAGAGACACCAGCCAAAGTAGCTAGCTAGCTCGCCGTCAAGCTCTGCCCATGTGGTGC
ATGTCTCGCTGACT----TGGTTCTGGACGGCGCACGTACGTACGCG---TCC-TTTGCAGGTGGAGAGGCAGCTCGATC
TCGTCTACGGCGGCGGCAGCGGCGGCCTGATGGGCCTCGTGTCCAAGGCCGTCCACGACGGCGGCCGCCACGTCCTCGGG
TAAAGTCCTACACGCACTACGCATCTGCTGCTCCTGCAGTGCCTCTCACTTTCTGAGATA---GCTTCCATGGAG---CT
ATAGCTTGCAGTTTTACCATAAATAATCGTCTGGCTGCTTGCTCCTGTGTGCAGGGTCATCCCTAGTGCTCTCCTGCCGG
AAGAGGTAGTGCATGCGCGAATCTCTTCTGCCACC-TACA-----CACATGCATGTCATGTCCTCCCTGCATGATA----
--AACGAAATGTATTGCATG---------TGCTTATTTTTACTGCT--------------ATATATGAAACGTGCTTTTG
AATGTCTACTACGTGCGTACGAGCATTTCCTAGGTGTCAGGGGAGACGTTGGGAGAGGTGAAAGTGGTCAGGGACATGCA
TGAGCGCAAGTCAGAAATGGCAAAACACTCGGACGCCTTCATCGCACTGCCAGGTCACAGACTG--CCACTCATCTTAGC
CACTATGTACTACTCGTGTGTGTGTGTGTGTG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTTGGAAAATGTTGCTAATGTGTGACGTTTAAGGTCGACA
TGACATGATAATAACA---AATCAAGAAGCTTAGA-------AAACGGGTTA---AGTTCTTGCGTTGCGGCTCATTTCT
TGTGTAACATACGTACGTGCAGGCGGATATGGGACGATCGAAGAGCTGCTGGAGATCATAACGTGGGCGCAGCTGGGGAT
CCATAACAAACCTGTAAGCTTGTCGTATTTAACTGCCATTCTGCATTATTCCTACATTCATGTATGTGCCGGGGCCAGTG
ATTGGTTAGCCAGATACTAGTAGTTGTGTGTACATATATGCACTACGTAGGCCCTCGTGCCTGCCCTAATCCTCACGCCG
TTCCTAGCTAGCGAAAGCGAAAGCGAAAACGATGTGTAACTATAATTTGGCAACTTACGTACGGTTG---GTGATGTCTC
GTTGCATTAGGTGGGGCTGCTCAACGTGGACGGCTACTACAACAGCCTGCTTTCGCTGTTCGACAAGGGCGTCGAGGAGG
GCTTCATCGACGACGCGGCGCGCAACATCTTCGTCCTCGCCGACAACGCCGCCGACCTGCTCACCAAGCTCACGGCCGCG
GCGGTGGCGGCCCACGTTGACGACGGCGGCGAC---GACCGCAACGGCACGGCGGCCGCCGGCGTCAAGAGGAAAAGAGG
CTAGCTGACTAGCTAGCAGCT-------GGTCCCTGCCCGTCGTCGTGTAGCTTCGTCTTCGTCAAGCTTACAATGTTCT
ACTATCTATTAGCTCTG-------AAATAAT---CTTCTTCAGGCATGTAATATCGAGCGTTCCCTAACCC---TAATAT
TCCGTGGCTAGCACAAAGTATGCATGCTTCAATGCTCCGTAATTAAGCACAAGTGTACAAGTGTACGGGTGCTGGAGTTG
TACCTTGCAGCGCAGCA-GTCGTACCATCGCGTTGTACTCTTCCCACCTACTAATATTTTATGTTTTCTGGCTACGATAT
TAATGTGCACAGTCATGTCAGCAGCACACAGCGCACTCGTT-C---GTATCAGGTACGCCTAGTACAGCTTGCCGTGCAT
CTCGTAAAATGAAAGTAAAAGATGGGCGCGAACCATATATACC---------CTCTCACTTGGACCCACAAGCTT--GAG
CATCTACAACTATGATTTCCTCGTCTGGGGCCCTATACGTCCGGGGCAGTGACCATATGCCCGCACCCAAATTCATACTC
CCTCCGTCCGTAAATACTTGTCATCAAAATGATTAAAAAATGATGTATCTAGACGTATTTTAGTTCTAGATACAATCTTT
TTTATTTATTTTAATGACAAGTATTTTCGGACGGAGGGAGTACAAAACATGCAGAGGTAGATCATGGCAACATAGAAATA
TAGAGCACACTCGGGCATAGATCCACATCTATATCTATATCTATATAAAAAGACTCAAAGGGGCAGATCCAATTAATCTC
GGCCATCAAATCATATCAATCCAACGACCTAGACTGCTCCAATGTCGAGCGCTCAACACGTTTAGCGTGCAGTTAATTTC
ATGCAAAATATAGTGCTAATCACATAATAACACGCAAATAATATCCTACTTAATATCCACATGCACTTAATATACTTTCA
AATTAACGTGCATTACACGTACAAATTGACTAGTAACACCCAAAAGACATAGTTAAACATTTCACCCAGAAGGCATAGTT
>chr4B_1
TTAGCAGGCGATAGTACTGGTTGTCCCTAATGTTA-GCTTGGGTAGAATCTCCTGTATGTG----TATATGCCACGTTTC
AGAGAGAAACCAGTGTTGGAACGAAAACATTTTTCTCGATGAGATATATGCAGAGTTAATATTCATGATGCAAGTACGAA
TGTACA-------GCTCAATTAGAGTCCCAAGTTGTTTCGTTTGTTAGGTTTAGTCCCTTCACTCAAAACCACATTCTGC
AATAATTTAATCAGATTAAATTAAACCTGATAAAAAACACAGCTAAATCAAAACTTTTCTTTATCTTCTCCTACCCATAC
CTAAATCAAATCAAATCCTACCAAAACCTCAACTAAATCGAAGCTTTTCCTTGCATTTCCCTACCCATACTCAAATCATA
TCAAATCTTACCAAAATTTAG----------------GATATGATGGGTGTAAGAGCATCTACAACCGGGCCCCATA-TT
TTTCCTGTAGCGGACAGCCCAGACAGGGGAGGGAAGAAAAAAAAAGCTCTCAACCGGATCCCTCAAATTGTCCTCATATG
TCCATGTTTTCCGTGAACCCTTTCTCTCTTTGTTTTTTTTTCTTTCTCTCTATTTATCTTCACCAATCATGTGCATGTGA
CTGGAAAT-GAAAATAGTAAGGGGCATAGCTGCATGAAACAAACAAATGAGGTCGCGGAGCGGACACGTCTCAGGGGATG
TATATATCGGGGATCAAATTAGGTTAGTCCGAATGTAGATGGTCTAAGGTATACGACGGTCACGATTAATATTGA---AG
GATATGTATATTACTAGCTACTCCCTCCGTTTCAATTTACTCGTCGTGTTTTTAGTTCACATTTGAACTAAAACCACGAC
GAGTAAATCGGGAGGGAGGGAGTAC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TTTTATAGCAGGCAAGGTAAGCAACGT---CTGTGTGGTGC
ATAAATAGGCGCCGAGGGGACCTCACAACTCACAAGGGCGCCGTCCTCCATAGCAGCACAGCACAGCACACCCACCCTCA
TCTTTAGCTCTGCCGAAGCACAAGCA------CCCACCCTCATCTTGGTCTCTCTATCCGTACGCCTCCCTCATCCCTCC
CTTCACCTCCGAT---ACATGGAGGCGAACCAGGAGAAGGCTCCGGAGACTGCCAGCGGCGGCGACGCCCCGAGGCCTGT
GCGAGCGGTGTGCGTCTTCTGCGGCAGCCGGCCTGGCAACCAGCCGTCCTTCAGCGCCGCCGCCCTCGACCTCGGGAAGC
AACTGGTGAG-----------------ACACCAACCAAAATAGC----TAGCTAGCCGTCAAGCTCTGCCCATGTGGTGC
ATGTCCCGCTGACATGCATGGTTCTCGACGGCGCACGCACGTACGCG---TCCTTTTGCAGGTGGAGAGGCAGCTCGATC
TCGTCTACGGCGGCGGCAGCGGCGGCCTGATGGGACTCGTGTCCAAGGCCGTCCACGACGGCGGCCGCCACGTCCTCGGG
TAAAGTCCTGCAGTACGC---------------------TGCCTCTCACTCTCTGAGATAC-AGCTTCCATGGAG---CT
ATAGCTTGCAGTTTTACCATGAATAATGGTCTGGCTGGCCGCTCCTGTGTGCAGGGTCATCCCTAGTGCTCTCCTGCCGG
AAGAGGTAGTGCATGCGCGAATCTCTTCTGCCACCGTACACTAGACACATACATGTCCTGCTCTCCCTGCAGCATCTGCA
TGAACGAAATGCATGCATATGCATGTGCTTGATTATTTTTACTTCTAGT-----------ATATATGAAACGTGTTTTTG
AATATCTACTACGTGCGTACGAGCATTTCCTAGGTGTCAGGGGAGACGTTGGGAGAGGTGAAAGTGGTGAGGGACATGCA
TGAGCGCAAGTCAGAAATGGCAAAACACTCGGACGCCTTCATCGCCCTGCCAGGTCACAGACTGCCCCACTCATCTTAGC
CACTATGGACTACTCGTGTGTGTGT-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------T---TGTGTTTCTTGGAAAATGTTGCTAAGCCAA-ACGTTTAAGGTCGACA
TGACATGATAATAACA---AATCAAGAAAGAAGCTTAGTAGTAAACGGGTGA---AGTTCTTGCGTTGCGGCTCATTTCT
TGTGTGACGTACCTGCGTGCAGGCGGATATGGGACGATCGAAGAGCTGCTGGAGATCATAACGTGGGCGCAGCTGGGGAT
CCATAACAAACCTGTAAGCTTGTCGTATTTAACTGCAATTCTGCATTATTCCTACATTAATGTATGTGCCGGGGCCAGTG
ATTGGTTAGCCAGATACTA---GTTGTGTGTACATATATGTG-TACGTAGGCCCTCGTGCCTGCCCTAATCCTCACGCCG
TTCCTAGCTAGCTC-------AGCGAAAGCGATGTGTAACTAACCAATGGCAACTTACGTACGGTTGTTGGTGATGTCTC
GTTGCATTAGGTGGGCCTGCTCAACGTGGACGGCTACTACAACAGCCTGCTTTCGCTGTTCGACAAGGGCGTCGAGGAGG
GCTTCATCGACGACGCCGCGCGCAACATCTTCGTCCTCGCCGACAACGCCGCCGACCTGCTCACCAAGCTTACGGCCGCG
GCGGTGGCGGCCCACGCTGACGACGGCGGCGGCGAGGACCGCAACGGCACGGCGGCCGCCGGCGCCAAGAGGAAAAGAGG
CTAGCTGACTAGCGAGCACCGAGCAGCAGGTCCCTGCCCGTCGTCGTGTAGCTTCGTCTTCGTCAAG-------------
---ATCTATTAGCTCTC-------AAATAATCTGCTTCTTCATGCATGTAATATCGAGCGTGCCCTAACCCTAATAATAT
TCCGTGGCTAGCACAAAGTATGCATGCTTCAATGCTCCGTAATTAAGCACAAGTGTACAAGTGTACGGGTGTTGGAGTTG
TACCTTACAGCGCAGCGGGTCGTACCATCGCGTTGTACTCTTCCCACCCAC---TATTTTATGTTTTCTGACTACGATAT
TAATGTGCACAGTCATGTCAGCAGAACACAGCGCACTCGTTTCGTAGTACCACGTACACCTAGTACAGCATGCCGTGCAG
CTGGCAAAATGAAAACAAAAGATAGGCGCGA---------ACC---------CTCTCACATGGACCCACAAGCTTCTGAG
CATCTACAACCATGGTTGCGTAATCCGGTGCCCTACACGTACG-------------------------------------
--------------------------------------------------------------------------------
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>chr4A_1
TTAGCAGGCGATAGTATTGGTGGTCCCTAATGTTA-GCTTAGGTAGAATCTCCTGTGTGTG----TATATGTCACATTTC
AGAGAGGAACCTGTGTTGGAACGAAAACATTTTTCTTGATGAGATATATACAGAGATGATTTTCATGATGCGAGTACGAA
TGTACAATGCAAGGCTCAATTAGAGTACCTAGTTGGTTCGTTTGTTAGGTTTAGTCCCTTCACTCAAAACCACGTTCTGC
AATAATTTAGTCAAATTAAA----------------------CTAAATCAAAGCTTTTCTTTATCTTCTCCTATCCGTAC
CTAAATCAAATCAAATCCTACCAAAACCTCAACTAAATCAAAATTTTTCCTTACATTTCCCTACCCATACTTAAATCATA
TCAAATCTTACCAAAATATAG----------------GATATGATTGGTGTAAGAACATCTATAACCGGACCTCATA-TT
TT-------GCGGACAGCCCGGACAGGGGAGAGAATAAGAAAAAATCACTCAACCGGACTCCTGAAATTGTCCTCATATG
TCCAAGTTCTCCGTGAACCATTTCTCTCCTTGTTTTTGTCCT----TCTCTCTTTACCATCACCAATCATGTGCATGTGT
CTAGACATGG----------------------------------AAATGAGGGTTCGGAGCGGACACGTCCGGGG-----
-ATGTACCGGGGATCAAATTAGTTTAGTCCGGCTGTAGATGGTCTAAGGTATATGACTT---------ATATTGAATTAG
AATATGTATATTAGTAGCGAAAGTGCTATTGTGAGCTCGAGCTCACAGGCTCCCTTTGCTACAGTACACACGAAAAAATA
TTTAAATAGTTCAAAAAAATCTGAATTTTTTTGGCTACAAACATTGATATCTTTTTCACATGCGTGCAAAATTTCATGAA
AAAATGACATTCATGCAGGTCTCGGAAAAAAAGACAAAATCGATGCTCCAAAATGTATCCAAAAACAGTTTTTTTGGAGC
ATGATTTTTTTTTTGCCGGGACCTCCACAAATGTCATTTCATTACGAAAATTGGTACGCATGTAGAAAAAACATCAAAGT
TTCTTGACAAATAATTTCAGATTTTGTTGAATTGTTTTACTATTTTTTCTGATGTTACTGTTCATCCGTGATCACTGGTG
ACCGGGATCAATTCCTCCGTGTCCTATTAGTAGCTACTTTTATACAGCAGGCAAGTTAAGCAACAACGCCTGTCTGGTGC
ATAAATAGGCGGCGAGGGGAC-------CTCACAAGGGCGCCGTCCTCCATAGCAGCACAGCACA-----CCCACCCTCA
TCTTCAGCTCTGCCGAAGCACAAGCAGAAGCACCCACCCTCATCTTGGTCTCTCTATCCGTACGCCTCCCTCACCCCTCC
CTTCACCGCCCGAC--ACATGGAGGCGAACCAGGAGAAGGCTCCGGGGACTGCCACCGGCGGCGACGCCCCGAGGCCGGT
GCGAGCGGTGTGCGTCTTCTGCGGCAGCAGGCCTGGCAACCGGCCGTCCTTCAGCGCGGCCGCCCTCGACCTCGGGAAGC
AACTGGTG---------------------------------AGC----TAGCTAGCCGTCAAGCTCTGCCCATGTGGTGC
ATGTCTCGCTAACT----TGGTTCTCGACGGCGCACGTACGCATCCTTAATCCTTTTGCAGGTTGAGCGGCAGCTCGATC
TCGTCTACGGCGGCGGCAGCGGCGGCCTGATGGGCCTCGTGTCCAAGGCCGTCCACGACGGCGGCCGCCACGTCCTCGGG
TAAAGTCCTACACTGCGCAT-------------CTACAGTGCCTCTCACTCTCTGAGATACTAGCTTCCATGGTGGAACT
ATAGCTTGCAGTTTTGCCATAAATAATCGTCTGGCTGGCTGCTCCTGTGTGCAGGGTCATCCCTAGTGCTCTCCTGCCGG
AAGAGGTAGTGCATGCGCGAATCTCTTCTGCCACCGTACA-----CACATACATGTCCTGCTCTCCCTGCATTATCTGCA
TGAACGAAATGCATGCATGTTCC------TGATTATTTTAACTTCTAGTAATATACTATGATATATGAAACGTGTTTTTG
AATGT---------GCGTACGAGTCTTTCCTAGGTGTCAGGGGAGACGTTGGGAGAGGTGAAAGTGGTCAGGGACATGCA
TGAGCGCAAGTCAGAAATGGCAAAACACTCGGACGCCTTCATCGCCCTGCCAGGTCACAGACTGT--CACTGATCTTAGC
CACTGCGTGCTACTCATGCGTGTGTGCGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTGTGTGTGTGTGTGTGTGT---TGAGTTTCTTGGAAAATGTTGGTAATGTGTGAAGTTAGCCAAACGTT
CAAGGTCGATACATGGAGTAATCAAGAATCTTAGA-------AGGCGGGTTAATGAGTTCTTGCGTTGCTGCTCATTGCT
TGTGTAACGTACGTACGTGCAGGCGGATATGGGACGATCGAAGAGCTGCTGGAGATCATAACGTGGGCGCAGCTGGGGAT
CCATAACAAACCTGTAAGCTTGTCGCATTTAACTGCCATTCTGCATTCTTCCTACA-TAATGTATGTGCCGGGGCCAGTG
ATTGGTTAGGCAGATACTAGTG-----GTGTATACATATGTA-TACGTAGGCCCTCG----TGCCCTAATCCTCACGCCG
TTCCT-GCTAGCTC-------AACGAAAACGATGTGTAACTAA----TGGCAACTTACGTGCGGTTGGTGATGATGTCTC
GTTGCATTAGGTGGGGCTGCTCAACGTGGACGGCTACTACAACAGCCTGCTTTCGCTGTTCGACAAGGGCGTCGAGGAGG
GCTTCATCGACGACGCGGCGCGCAACATCTTCGTCCTCGCCGACAACGCCTCCGAGCTGCTCACCAAGCTCACGGCCCAT
CTTG---------ACGACGCCGGCGGCAGCGAC---GACCGCAACGGCATGGCAGCCGCCGGCGTCAAGAGGAAAAGAGG
CTAGCTGACTAGCTAG---CGAGCAGCAGGTCCCTGCCCTTCGTCGTGTAGCTTCGTCTTCGTCAAGCTTACTAAGTTCT
ATCTATTGCTAGCTCTTATTAAATAAATAAT---CTTCTTCATGCATGTAATATCGAGCGTTCCCTAACCCTAA---TAT
TCCGTGGCAAGCACAAAGTATGCATGCTTCAATGCTCCGTAATTAAGCACAAGTGTACAAGCGTACGGGTGCTGGAGTTG
TACCTTGCAGCGCAGCAA-TCGTACCATCGCGTTGTACTCTTCCCACCTA---ATATTTTATGTCTTCTGGCTACGATAT
TAATGTGCACAGTCATGTCAGCAGCACACAGCGCACTCGTTTC---GTACCACGTACACCTAGTACAGCTTGCCGTGCGT
CTCGCAAAATGAAAGCAAAAGATAGGCGCGA---------ACCATTTATACCCTCTCACATGGACCCACAAGCTTCTGAG
CATCTACAACCATGGTTGCCTAATCTGG----------------------------------------------------
--------------------------------------------------------------------------------
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>SNPs
-----------------------------------S--------S--------S-------SSSS---------------
---------------------S-------------------------S--------------------------------
----S-----------------------------------------------------------------------S---
-------------------------S--S------------------------------------S-S--------S---
------------------------------------------------------------------S-------SSS---
-----------------SSSSSSSSSSSSSSSSSSSS----S-------------------------S---------S--
-----------------------------SS-----------------------S------------------------S
----------------------S--S---S-S------------------------------S-----------------
--SS----------S--------S----S--S----S-------------------------------------------
--------------------------------S----------------------S---S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S-S-------
--------S-----SS----------------S-----------------------------------------------
--------------------------------------------------------------------------------
----------SSSSSSSSSSSSSSSSS------S-----S----SSSS-----S--------------------------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
-------------SSSSS-SSSSSSSSSSSSSS--S--------------S-----------------------------
-------------------------------------SS-----------------------------------------
--------------------------------------------------S------S--SS----------S--S----
-----------S--SSSSSS-----------S-----------S------------------------------S-----
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------SSS-----------------------------------------------
----------------------------S---------------------------------------------------
--------S-----------------------------------------------------------------------
----------------------------------------------------------S---------------------
---------------------S------------------S-S-------------------------------------
------------SSSSSSSSS---------------------SSSSS---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
------------------S-S---------------------------------------------------S-S-----
-SS-------------S-------------------------S-------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------SS---------------------------
-------------------------------------------------S--S----S----------------------
----S----------S-------S-------SSSSSSSSS-------------------S--------------------
----------S---S--S---SS-----S------S----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_590
--------------------------------------------------------------------------------
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----------CCGTGAACCCTTCCTGTCTC--------------------------------------------------
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>reverse_3056
--------------------------------------------------------------------------------
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---------------AGCGAAAGCGAAAACGATGT---------------------------------------------
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>forward_1856
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------CGGG
TAAAGTCCTACACGCA----------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3912
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TTCATACTC
CCTCCGTCCGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
