Multiple sequence alignment - TraesCS4D01G006200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G006200 chr4D 100.000 3152 0 0 1 3152 3405528 3402377 0.000000e+00 5821.0
1 TraesCS4D01G006200 chr4D 80.769 156 12 10 264 407 3415629 3415480 4.300000e-19 106.0
2 TraesCS4D01G006200 chr4D 83.471 121 11 4 524 644 3410345 3410234 1.550000e-18 104.0
3 TraesCS4D01G006200 chr4D 90.141 71 1 2 1 70 3410423 3410358 1.560000e-13 87.9
4 TraesCS4D01G006200 chr4B 86.454 2510 170 77 457 2901 6139614 6142018 0.000000e+00 2595.0
5 TraesCS4D01G006200 chr4B 86.364 176 20 4 132 305 6139333 6139506 4.150000e-44 189.0
6 TraesCS4D01G006200 chr4A 89.407 1822 131 33 676 2483 601356430 601358203 0.000000e+00 2239.0
7 TraesCS4D01G006200 chr4A 81.903 641 59 31 23 626 601355807 601356427 3.650000e-134 488.0
8 TraesCS4D01G006200 chr4A 77.951 449 71 17 2471 2901 601358454 601358892 4.030000e-64 255.0
9 TraesCS4D01G006200 chr2B 94.241 191 9 2 2964 3152 574791703 574791893 1.110000e-74 291.0
10 TraesCS4D01G006200 chr2B 94.624 186 7 3 2964 3147 685097221 685097405 5.150000e-73 285.0
11 TraesCS4D01G006200 chr2B 79.545 176 22 7 484 658 648910473 648910635 2.570000e-21 113.0
12 TraesCS4D01G006200 chr1D 94.241 191 9 2 2964 3152 39656940 39657130 1.110000e-74 291.0
13 TraesCS4D01G006200 chr1D 93.717 191 10 2 2964 3152 5743488 5743298 5.150000e-73 285.0
14 TraesCS4D01G006200 chr1D 93.717 191 10 2 2964 3152 120851268 120851078 5.150000e-73 285.0
15 TraesCS4D01G006200 chr5D 93.717 191 10 2 2964 3152 507902139 507901949 5.150000e-73 285.0
16 TraesCS4D01G006200 chr5D 93.194 191 11 2 2964 3152 444010537 444010347 2.390000e-71 279.0
17 TraesCS4D01G006200 chr5D 100.000 28 0 0 286 313 45362375 45362402 6.000000e-03 52.8
18 TraesCS4D01G006200 chr2D 93.684 190 11 1 2964 3152 577523077 577523266 1.850000e-72 283.0
19 TraesCS4D01G006200 chr2D 93.194 191 11 2 2964 3152 131966682 131966492 2.390000e-71 279.0
20 TraesCS4D01G006200 chr2D 93.548 62 4 0 2723 2784 577522371 577522432 3.350000e-15 93.5
21 TraesCS4D01G006200 chr3D 80.000 175 23 4 484 658 539500535 539500373 5.520000e-23 119.0
22 TraesCS4D01G006200 chr6A 78.409 176 24 6 484 658 74428878 74428716 5.560000e-18 102.0
23 TraesCS4D01G006200 chr6D 78.947 133 18 5 1741 1873 210749977 210750099 7.250000e-12 82.4
24 TraesCS4D01G006200 chr7D 95.652 46 2 0 2472 2517 46917838 46917793 1.210000e-09 75.0
25 TraesCS4D01G006200 chr7A 95.652 46 2 0 2472 2517 561781271 561781316 1.210000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G006200 chr4D 3402377 3405528 3151 True 5821 5821 100.000 1 3152 1 chr4D.!!$R1 3151
1 TraesCS4D01G006200 chr4B 6139333 6142018 2685 False 1392 2595 86.409 132 2901 2 chr4B.!!$F1 2769
2 TraesCS4D01G006200 chr4A 601355807 601358892 3085 False 994 2239 83.087 23 2901 3 chr4A.!!$F1 2878

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
602 648 0.037232 GGGCGGCTGTCCATCTATAC 60.037 60.0 12.53 0.0 40.65 1.47 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2384 2488 0.534877 TGGAAGCAATGCACTGACGT 60.535 50.0 8.35 0.0 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 6.380190 TGTTGCAAAGTTTTACTGTTAACGT 58.620 32.000 0.00 4.87 0.00 3.99
64 65 3.723348 GGGTTGCAGACGCGGTTC 61.723 66.667 12.47 0.00 42.97 3.62
67 68 1.082756 GTTGCAGACGCGGTTCTTG 60.083 57.895 12.47 1.96 42.97 3.02
108 123 6.094048 ACATTATATATTGATTGCGGAGGTGC 59.906 38.462 10.80 0.00 0.00 5.01
114 129 3.335356 ATTGCGGAGGTGCTCTGGG 62.335 63.158 0.00 0.00 37.35 4.45
199 220 5.984695 AATAAAGAAGAAAAGAGGTGGGC 57.015 39.130 0.00 0.00 0.00 5.36
200 221 3.312736 AAAGAAGAAAAGAGGTGGGCA 57.687 42.857 0.00 0.00 0.00 5.36
202 223 0.884514 GAAGAAAAGAGGTGGGCAGC 59.115 55.000 0.00 0.00 0.00 5.25
203 224 0.540597 AAGAAAAGAGGTGGGCAGCC 60.541 55.000 1.26 1.26 0.00 4.85
205 226 2.748058 GAAAAGAGGTGGGCAGCCGA 62.748 60.000 5.00 0.00 0.00 5.54
252 276 3.069318 ACCTCCGCCTCTCGTTCC 61.069 66.667 0.00 0.00 36.19 3.62
314 338 2.113139 CTCCACCACCACCACCAC 59.887 66.667 0.00 0.00 0.00 4.16
315 339 3.825160 CTCCACCACCACCACCACG 62.825 68.421 0.00 0.00 0.00 4.94
316 340 4.947147 CCACCACCACCACCACGG 62.947 72.222 0.00 0.00 42.50 4.94
324 348 1.959226 CACCACCACGGGAGAAACG 60.959 63.158 0.00 0.00 40.22 3.60
330 354 1.248785 CCACGGGAGAAACGGAGAGA 61.249 60.000 0.00 0.00 35.23 3.10
347 371 5.686124 CGGAGAGAGCCAATAGAAAAATCCT 60.686 44.000 0.00 0.00 0.00 3.24
354 378 7.555914 AGAGCCAATAGAAAAATCCTCTCTTTC 59.444 37.037 0.00 0.00 0.00 2.62
355 379 7.409358 AGCCAATAGAAAAATCCTCTCTTTCT 58.591 34.615 2.26 2.26 41.21 2.52
356 380 7.892771 AGCCAATAGAAAAATCCTCTCTTTCTT 59.107 33.333 1.98 0.00 39.50 2.52
398 424 5.221742 TGGAGGAAAAGAGAGAAGAAGGAAC 60.222 44.000 0.00 0.00 0.00 3.62
407 433 3.073209 AGAGAAGAAGGAACAAGGAACCC 59.927 47.826 0.00 0.00 0.00 4.11
408 434 3.056832 AGAAGAAGGAACAAGGAACCCT 58.943 45.455 0.00 0.00 33.87 4.34
410 436 2.707554 AGAAGGAACAAGGAACCCTCT 58.292 47.619 0.00 0.00 30.89 3.69
411 437 2.640332 AGAAGGAACAAGGAACCCTCTC 59.360 50.000 0.00 0.00 30.89 3.20
412 438 1.363246 AGGAACAAGGAACCCTCTCC 58.637 55.000 0.00 0.00 30.89 3.71
415 441 0.767060 AACAAGGAACCCTCTCCGGT 60.767 55.000 0.00 0.00 40.75 5.28
421 447 2.633509 AACCCTCTCCGGTTCGTCG 61.634 63.158 0.00 0.00 42.71 5.12
422 448 4.493747 CCCTCTCCGGTTCGTCGC 62.494 72.222 0.00 0.00 0.00 5.19
423 449 4.493747 CCTCTCCGGTTCGTCGCC 62.494 72.222 0.00 0.00 0.00 5.54
425 451 3.685214 CTCTCCGGTTCGTCGCCTG 62.685 68.421 0.00 0.00 0.00 4.85
431 459 2.048127 GTTCGTCGCCTGCTTCCT 60.048 61.111 0.00 0.00 0.00 3.36
513 545 3.339093 CACCTCTTCCCCACCCCC 61.339 72.222 0.00 0.00 0.00 5.40
531 563 0.871024 CCCTTATCCTCTCCCCTCCT 59.129 60.000 0.00 0.00 0.00 3.69
536 568 1.376249 ATCCTCTCCCCTCCTCTCCC 61.376 65.000 0.00 0.00 0.00 4.30
538 570 3.036959 TCTCCCCTCCTCTCCCCC 61.037 72.222 0.00 0.00 0.00 5.40
573 619 1.299541 CCAACCGAATCGAATCCAGG 58.700 55.000 3.36 0.00 0.00 4.45
574 620 1.299541 CAACCGAATCGAATCCAGGG 58.700 55.000 3.36 0.00 0.00 4.45
575 621 0.180406 AACCGAATCGAATCCAGGGG 59.820 55.000 3.36 0.00 0.00 4.79
576 622 0.689745 ACCGAATCGAATCCAGGGGA 60.690 55.000 3.36 0.00 35.55 4.81
602 648 0.037232 GGGCGGCTGTCCATCTATAC 60.037 60.000 12.53 0.00 40.65 1.47
649 695 4.037208 CCCAAATCGAATCCATCCTCTTTG 59.963 45.833 0.00 0.00 0.00 2.77
657 703 3.243359 TCCATCCTCTTTGCTTTGGTT 57.757 42.857 0.00 0.00 0.00 3.67
658 704 3.575805 TCCATCCTCTTTGCTTTGGTTT 58.424 40.909 0.00 0.00 0.00 3.27
659 705 4.735369 TCCATCCTCTTTGCTTTGGTTTA 58.265 39.130 0.00 0.00 0.00 2.01
660 706 5.332743 TCCATCCTCTTTGCTTTGGTTTAT 58.667 37.500 0.00 0.00 0.00 1.40
755 816 1.199624 GCCGTTGCTCTGTTTTGTTG 58.800 50.000 0.00 0.00 33.53 3.33
774 835 3.509517 GCTTCCTGCCATGGATTCT 57.490 52.632 18.40 0.00 35.83 2.40
775 836 1.772836 GCTTCCTGCCATGGATTCTT 58.227 50.000 18.40 0.00 35.83 2.52
776 837 1.680207 GCTTCCTGCCATGGATTCTTC 59.320 52.381 18.40 0.00 35.83 2.87
777 838 2.686118 GCTTCCTGCCATGGATTCTTCT 60.686 50.000 18.40 0.00 35.83 2.85
778 839 3.629087 CTTCCTGCCATGGATTCTTCTT 58.371 45.455 18.40 0.00 35.83 2.52
779 840 3.744940 TCCTGCCATGGATTCTTCTTT 57.255 42.857 18.40 0.00 0.00 2.52
780 841 4.860802 TCCTGCCATGGATTCTTCTTTA 57.139 40.909 18.40 0.00 0.00 1.85
781 842 4.526970 TCCTGCCATGGATTCTTCTTTAC 58.473 43.478 18.40 0.00 0.00 2.01
782 843 3.633986 CCTGCCATGGATTCTTCTTTACC 59.366 47.826 18.40 0.00 0.00 2.85
819 893 2.406616 CCGCGGATTGGGTTTCTGG 61.407 63.158 24.07 0.00 0.00 3.86
831 905 1.302511 TTTCTGGCTTCTGACCGGC 60.303 57.895 0.00 0.00 33.23 6.13
832 906 1.768684 TTTCTGGCTTCTGACCGGCT 61.769 55.000 0.00 0.00 33.23 5.52
841 915 1.219393 CTGACCGGCTTCCTTCTCC 59.781 63.158 0.00 0.00 0.00 3.71
843 917 0.836400 TGACCGGCTTCCTTCTCCTT 60.836 55.000 0.00 0.00 0.00 3.36
889 964 2.614057 AGCGATAAAGCGGAGGAATTTG 59.386 45.455 0.00 0.00 43.00 2.32
891 966 2.290641 CGATAAAGCGGAGGAATTTGGG 59.709 50.000 0.00 0.00 0.00 4.12
892 967 1.470051 TAAAGCGGAGGAATTTGGGC 58.530 50.000 0.00 0.00 0.00 5.36
893 968 1.595093 AAAGCGGAGGAATTTGGGCG 61.595 55.000 0.00 0.00 0.00 6.13
894 969 4.193334 GCGGAGGAATTTGGGCGC 62.193 66.667 0.00 0.00 0.00 6.53
895 970 2.749839 CGGAGGAATTTGGGCGCA 60.750 61.111 10.83 0.00 0.00 6.09
896 971 2.764314 CGGAGGAATTTGGGCGCAG 61.764 63.158 10.83 0.00 0.00 5.18
897 972 2.418083 GGAGGAATTTGGGCGCAGG 61.418 63.158 10.83 0.00 0.00 4.85
898 973 1.378514 GAGGAATTTGGGCGCAGGA 60.379 57.895 10.83 0.00 0.00 3.86
899 974 0.965363 GAGGAATTTGGGCGCAGGAA 60.965 55.000 10.83 0.00 0.00 3.36
900 975 0.967380 AGGAATTTGGGCGCAGGAAG 60.967 55.000 10.83 0.00 0.00 3.46
901 976 1.512694 GAATTTGGGCGCAGGAAGG 59.487 57.895 10.83 0.00 0.00 3.46
902 977 0.965363 GAATTTGGGCGCAGGAAGGA 60.965 55.000 10.83 0.00 0.00 3.36
903 978 0.324645 AATTTGGGCGCAGGAAGGAT 60.325 50.000 10.83 0.00 0.00 3.24
904 979 0.324645 ATTTGGGCGCAGGAAGGATT 60.325 50.000 10.83 0.00 0.00 3.01
905 980 0.541764 TTTGGGCGCAGGAAGGATTT 60.542 50.000 10.83 0.00 0.00 2.17
909 984 3.068729 GCGCAGGAAGGATTTGGCC 62.069 63.158 0.30 0.00 0.00 5.36
911 986 2.418083 GCAGGAAGGATTTGGCCGG 61.418 63.158 0.00 0.00 0.00 6.13
912 987 2.043953 AGGAAGGATTTGGCCGGC 60.044 61.111 21.18 21.18 0.00 6.13
914 989 3.518068 GAAGGATTTGGCCGGCGG 61.518 66.667 24.35 24.35 0.00 6.13
936 1016 1.449601 CCGGGATCTGGTCGTTTGG 60.450 63.158 0.00 0.00 0.00 3.28
939 1019 0.323629 GGGATCTGGTCGTTTGGTCA 59.676 55.000 0.00 0.00 0.00 4.02
952 1032 5.007724 GTCGTTTGGTCATTCTTCTTCTTGT 59.992 40.000 0.00 0.00 0.00 3.16
953 1033 5.588648 TCGTTTGGTCATTCTTCTTCTTGTT 59.411 36.000 0.00 0.00 0.00 2.83
954 1034 5.682862 CGTTTGGTCATTCTTCTTCTTGTTG 59.317 40.000 0.00 0.00 0.00 3.33
955 1035 6.458206 CGTTTGGTCATTCTTCTTCTTGTTGA 60.458 38.462 0.00 0.00 0.00 3.18
956 1036 7.428826 GTTTGGTCATTCTTCTTCTTGTTGAT 58.571 34.615 0.00 0.00 0.00 2.57
980 1060 2.682494 GACTGGTAGGTGGGCGGA 60.682 66.667 0.00 0.00 0.00 5.54
981 1061 2.040606 ACTGGTAGGTGGGCGGAT 59.959 61.111 0.00 0.00 0.00 4.18
983 1063 2.766651 TGGTAGGTGGGCGGATCC 60.767 66.667 0.00 0.00 0.00 3.36
1161 1262 4.008933 AGAAGGCAGCCGTCGCTT 62.009 61.111 20.28 1.90 45.55 4.68
1542 1643 2.506472 GTCGAGGGGATGAAGGCC 59.494 66.667 0.00 0.00 0.00 5.19
1576 1677 2.527624 AGGTGCTCTGCTGGTCCA 60.528 61.111 0.00 0.00 0.00 4.02
1633 1734 4.779733 AGGAGATCCACGGCGGGT 62.780 66.667 13.24 0.00 38.89 5.28
1635 1736 2.511600 GAGATCCACGGCGGGTTG 60.512 66.667 13.24 0.00 34.36 3.77
1710 1811 2.576648 GGTCAACTACAAGATCCCCCTT 59.423 50.000 0.00 0.00 0.00 3.95
1791 1892 2.677979 GGGCTTCTTTGACGCCGTC 61.678 63.158 10.96 10.96 46.12 4.79
1824 1925 4.029809 GTGTACCGGGGCAAGCCT 62.030 66.667 6.32 0.00 36.10 4.58
1944 2045 2.514013 CGCCCGTATGAAGTGCGTC 61.514 63.158 0.00 0.00 40.33 5.19
2004 2105 1.082756 CGACCTTGTTGTCAAGCGC 60.083 57.895 0.00 0.00 46.74 5.92
2157 2261 6.370994 TCGACGATATATTCTTGTAGGAGACC 59.629 42.308 0.00 0.00 0.00 3.85
2165 2269 0.413832 TTGTAGGAGACCCAGGAGCT 59.586 55.000 0.00 0.00 33.88 4.09
2193 2297 7.227711 CCGGTATGTATGTACATTTGATTTGGA 59.772 37.037 14.77 0.00 43.99 3.53
2194 2298 8.616942 CGGTATGTATGTACATTTGATTTGGAA 58.383 33.333 14.77 0.00 43.99 3.53
2217 2321 1.518903 GCCCTTCTCCTGTTGCACAC 61.519 60.000 0.00 0.00 0.00 3.82
2239 2343 4.213270 ACGTGTATGATGGATAATTTGCGG 59.787 41.667 0.00 0.00 0.00 5.69
2386 2490 6.551385 AAGAGGGTACTTGATACGTATACG 57.449 41.667 23.24 23.24 46.33 3.06
2463 2571 8.706492 AACATATGTTTATTTGCAGTGAATGG 57.294 30.769 15.47 0.00 33.93 3.16
2511 2878 1.055849 TGTTGCCTGCTCTGTTCCTA 58.944 50.000 0.00 0.00 0.00 2.94
2526 2893 2.949177 TCCTACTTGGAGCAGCAAAA 57.051 45.000 0.00 0.00 40.56 2.44
2529 2896 3.507233 TCCTACTTGGAGCAGCAAAATTG 59.493 43.478 0.00 0.00 40.56 2.32
2531 2898 3.375782 ACTTGGAGCAGCAAAATTGTC 57.624 42.857 0.00 0.00 0.00 3.18
2533 2900 3.385755 ACTTGGAGCAGCAAAATTGTCTT 59.614 39.130 0.00 0.00 0.00 3.01
2534 2901 4.584325 ACTTGGAGCAGCAAAATTGTCTTA 59.416 37.500 0.00 0.00 0.00 2.10
2535 2902 4.771590 TGGAGCAGCAAAATTGTCTTAG 57.228 40.909 0.00 0.00 0.00 2.18
2536 2903 3.057315 TGGAGCAGCAAAATTGTCTTAGC 60.057 43.478 0.00 0.00 0.00 3.09
2537 2904 3.192212 GGAGCAGCAAAATTGTCTTAGCT 59.808 43.478 0.00 0.00 0.00 3.32
2538 2905 4.321527 GGAGCAGCAAAATTGTCTTAGCTT 60.322 41.667 0.00 0.00 0.00 3.74
2539 2906 4.802999 AGCAGCAAAATTGTCTTAGCTTC 58.197 39.130 0.00 0.00 0.00 3.86
2540 2907 4.522022 AGCAGCAAAATTGTCTTAGCTTCT 59.478 37.500 0.00 0.00 0.00 2.85
2542 2909 6.207417 AGCAGCAAAATTGTCTTAGCTTCTTA 59.793 34.615 0.00 0.00 0.00 2.10
2544 2911 7.219726 GCAGCAAAATTGTCTTAGCTTCTTATC 59.780 37.037 0.00 0.00 0.00 1.75
2557 2924 6.654793 AGCTTCTTATCATCAGACGAAAAC 57.345 37.500 0.00 0.00 0.00 2.43
2560 2927 7.173218 AGCTTCTTATCATCAGACGAAAACAAA 59.827 33.333 0.00 0.00 0.00 2.83
2562 2929 9.483062 CTTCTTATCATCAGACGAAAACAAATC 57.517 33.333 0.00 0.00 0.00 2.17
2568 2935 5.418310 TCAGACGAAAACAAATCTTCCAC 57.582 39.130 0.00 0.00 0.00 4.02
2569 2936 4.878971 TCAGACGAAAACAAATCTTCCACA 59.121 37.500 0.00 0.00 0.00 4.17
2572 2939 5.299279 AGACGAAAACAAATCTTCCACATGT 59.701 36.000 0.00 0.00 0.00 3.21
2575 2942 5.853282 CGAAAACAAATCTTCCACATGTCTC 59.147 40.000 0.00 0.00 0.00 3.36
2576 2943 6.293626 CGAAAACAAATCTTCCACATGTCTCT 60.294 38.462 0.00 0.00 0.00 3.10
2577 2944 6.566197 AAACAAATCTTCCACATGTCTCTC 57.434 37.500 0.00 0.00 0.00 3.20
2578 2945 4.248859 ACAAATCTTCCACATGTCTCTCG 58.751 43.478 0.00 0.00 0.00 4.04
2580 2947 3.516981 ATCTTCCACATGTCTCTCGTG 57.483 47.619 0.00 0.00 38.86 4.35
2581 2948 2.239400 TCTTCCACATGTCTCTCGTGT 58.761 47.619 0.00 0.00 45.91 4.49
2588 2955 3.778618 ACATGTCTCTCGTGTGATGATG 58.221 45.455 0.00 8.66 43.67 3.07
2589 2956 3.194329 ACATGTCTCTCGTGTGATGATGT 59.806 43.478 0.00 9.51 43.67 3.06
2590 2957 4.399303 ACATGTCTCTCGTGTGATGATGTA 59.601 41.667 11.97 0.00 43.67 2.29
2591 2958 5.068329 ACATGTCTCTCGTGTGATGATGTAT 59.932 40.000 11.97 0.00 43.67 2.29
2592 2959 6.263168 ACATGTCTCTCGTGTGATGATGTATA 59.737 38.462 11.97 0.00 43.67 1.47
2593 2960 6.884280 TGTCTCTCGTGTGATGATGTATAT 57.116 37.500 0.00 0.00 0.00 0.86
2594 2961 6.672147 TGTCTCTCGTGTGATGATGTATATG 58.328 40.000 0.00 0.00 0.00 1.78
2630 3006 5.556355 TGATGTGCTGTTGATCAGAATTC 57.444 39.130 0.00 0.00 46.27 2.17
2638 3014 6.263842 TGCTGTTGATCAGAATTCTGTTCTTT 59.736 34.615 31.87 17.25 46.27 2.52
2681 3057 6.931281 TCAAGATCTTCCACTGTTGTTTAGAG 59.069 38.462 4.57 0.00 0.00 2.43
2692 3068 5.897250 ACTGTTGTTTAGAGTTTTGGGGATT 59.103 36.000 0.00 0.00 0.00 3.01
2695 3071 6.381420 TGTTGTTTAGAGTTTTGGGGATTCAA 59.619 34.615 0.00 0.00 0.00 2.69
2697 3073 5.894393 TGTTTAGAGTTTTGGGGATTCAACA 59.106 36.000 0.00 0.00 0.00 3.33
2702 3078 6.524734 AGAGTTTTGGGGATTCAACAAAATC 58.475 36.000 15.92 14.07 43.39 2.17
2731 3107 4.991153 TGTCTGTGTTGTATTTTTGGCA 57.009 36.364 0.00 0.00 0.00 4.92
2738 3114 6.815089 TGTGTTGTATTTTTGGCAAGAATCT 58.185 32.000 18.06 0.92 0.00 2.40
2752 3128 5.393461 GGCAAGAATCTTGAATAACCACTGG 60.393 44.000 25.54 0.00 0.00 4.00
2756 3132 7.636150 AGAATCTTGAATAACCACTGGATTG 57.364 36.000 0.71 0.00 0.00 2.67
2759 3135 5.263599 TCTTGAATAACCACTGGATTGCAT 58.736 37.500 0.71 0.00 0.00 3.96
2760 3136 6.422333 TCTTGAATAACCACTGGATTGCATA 58.578 36.000 0.71 0.00 0.00 3.14
2763 3139 6.363882 TGAATAACCACTGGATTGCATATGA 58.636 36.000 6.97 0.00 0.00 2.15
2770 3146 5.766670 CCACTGGATTGCATATGATACTTGT 59.233 40.000 6.97 0.00 0.00 3.16
2779 3155 4.756642 GCATATGATACTTGTTGCCTGCTA 59.243 41.667 6.97 0.00 0.00 3.49
2785 3166 8.728337 ATGATACTTGTTGCCTGCTATATATG 57.272 34.615 0.00 0.00 0.00 1.78
2795 3176 5.046591 TGCCTGCTATATATGTGTTCCTACC 60.047 44.000 0.00 0.00 0.00 3.18
2856 3237 5.349061 AAATTCTCCCATTGCTTTGGATC 57.651 39.130 7.03 0.00 39.25 3.36
2860 3241 3.094572 CTCCCATTGCTTTGGATCTTGT 58.905 45.455 7.03 0.00 39.25 3.16
2864 3245 3.449737 CCATTGCTTTGGATCTTGTGGAT 59.550 43.478 0.00 0.00 39.25 3.41
2904 3291 5.289595 TCTGTATAATTCTGTGTGATCCGC 58.710 41.667 0.00 0.00 0.00 5.54
2905 3292 5.069119 TCTGTATAATTCTGTGTGATCCGCT 59.931 40.000 0.00 0.00 0.00 5.52
2906 3293 5.049828 TGTATAATTCTGTGTGATCCGCTG 58.950 41.667 0.00 0.00 0.00 5.18
2907 3294 2.479566 AATTCTGTGTGATCCGCTGT 57.520 45.000 0.00 0.00 0.00 4.40
2908 3295 2.479566 ATTCTGTGTGATCCGCTGTT 57.520 45.000 0.00 0.00 0.00 3.16
2909 3296 3.610040 ATTCTGTGTGATCCGCTGTTA 57.390 42.857 0.00 0.00 0.00 2.41
2910 3297 2.654749 TCTGTGTGATCCGCTGTTAG 57.345 50.000 0.00 0.00 0.00 2.34
2911 3298 1.002366 CTGTGTGATCCGCTGTTAGC 58.998 55.000 0.00 0.00 38.02 3.09
2912 3299 0.608130 TGTGTGATCCGCTGTTAGCT 59.392 50.000 0.00 0.00 39.60 3.32
2913 3300 1.001974 TGTGTGATCCGCTGTTAGCTT 59.998 47.619 0.00 0.00 39.60 3.74
2914 3301 1.661112 GTGTGATCCGCTGTTAGCTTC 59.339 52.381 0.00 0.00 39.60 3.86
2915 3302 1.275010 TGTGATCCGCTGTTAGCTTCA 59.725 47.619 0.00 0.00 39.60 3.02
2916 3303 2.093500 TGTGATCCGCTGTTAGCTTCAT 60.093 45.455 0.00 0.00 39.60 2.57
2917 3304 2.286294 GTGATCCGCTGTTAGCTTCATG 59.714 50.000 0.00 0.00 39.60 3.07
2918 3305 2.168313 TGATCCGCTGTTAGCTTCATGA 59.832 45.455 0.00 0.00 39.60 3.07
2919 3306 2.988010 TCCGCTGTTAGCTTCATGAT 57.012 45.000 0.00 0.00 39.60 2.45
2920 3307 2.554142 TCCGCTGTTAGCTTCATGATG 58.446 47.619 0.00 0.00 39.60 3.07
2921 3308 2.093500 TCCGCTGTTAGCTTCATGATGT 60.093 45.455 10.05 0.90 39.60 3.06
2922 3309 2.031314 CCGCTGTTAGCTTCATGATGTG 59.969 50.000 10.05 0.00 39.60 3.21
2923 3310 2.931969 CGCTGTTAGCTTCATGATGTGA 59.068 45.455 10.05 0.00 39.60 3.58
2924 3311 3.558829 CGCTGTTAGCTTCATGATGTGAT 59.441 43.478 10.05 0.00 39.60 3.06
2925 3312 4.552184 CGCTGTTAGCTTCATGATGTGATG 60.552 45.833 10.05 0.00 39.60 3.07
2926 3313 4.573607 GCTGTTAGCTTCATGATGTGATGA 59.426 41.667 10.05 0.00 38.45 2.92
2927 3314 5.238868 GCTGTTAGCTTCATGATGTGATGAT 59.761 40.000 10.05 0.00 38.45 2.45
2928 3315 6.613755 TGTTAGCTTCATGATGTGATGATG 57.386 37.500 10.05 0.00 36.54 3.07
2929 3316 6.350906 TGTTAGCTTCATGATGTGATGATGA 58.649 36.000 10.05 0.00 36.54 2.92
2930 3317 6.996282 TGTTAGCTTCATGATGTGATGATGAT 59.004 34.615 10.05 0.00 32.99 2.45
2931 3318 5.948992 AGCTTCATGATGTGATGATGATG 57.051 39.130 10.05 0.00 32.99 3.07
2932 3319 4.216472 AGCTTCATGATGTGATGATGATGC 59.784 41.667 12.79 12.79 46.62 3.91
2933 3320 4.023193 GCTTCATGATGTGATGATGATGCA 60.023 41.667 14.67 0.00 46.03 3.96
2934 3321 5.507315 GCTTCATGATGTGATGATGATGCAA 60.507 40.000 14.67 0.00 46.03 4.08
2935 3322 6.648879 TTCATGATGTGATGATGATGCAAT 57.351 33.333 0.00 0.00 32.99 3.56
2936 3323 6.012658 TCATGATGTGATGATGATGCAATG 57.987 37.500 0.00 0.00 27.74 2.82
2937 3324 5.534654 TCATGATGTGATGATGATGCAATGT 59.465 36.000 0.00 0.00 27.74 2.71
2938 3325 5.845391 TGATGTGATGATGATGCAATGTT 57.155 34.783 0.00 0.00 0.00 2.71
2939 3326 5.587289 TGATGTGATGATGATGCAATGTTG 58.413 37.500 0.00 0.00 0.00 3.33
2940 3327 5.358442 TGATGTGATGATGATGCAATGTTGA 59.642 36.000 0.00 0.00 0.00 3.18
2941 3328 5.845391 TGTGATGATGATGCAATGTTGAT 57.155 34.783 0.00 0.00 0.00 2.57
2942 3329 5.827666 TGTGATGATGATGCAATGTTGATC 58.172 37.500 0.00 0.00 0.00 2.92
2943 3330 5.358442 TGTGATGATGATGCAATGTTGATCA 59.642 36.000 0.00 0.00 33.00 2.92
2944 3331 5.915196 GTGATGATGATGCAATGTTGATCAG 59.085 40.000 0.00 0.00 32.45 2.90
2945 3332 5.825679 TGATGATGATGCAATGTTGATCAGA 59.174 36.000 0.00 0.00 32.45 3.27
2946 3333 6.320164 TGATGATGATGCAATGTTGATCAGAA 59.680 34.615 0.00 0.00 32.45 3.02
2947 3334 6.709018 TGATGATGCAATGTTGATCAGAAT 57.291 33.333 0.00 0.00 32.45 2.40
2948 3335 6.735130 TGATGATGCAATGTTGATCAGAATC 58.265 36.000 0.00 0.00 32.45 2.52
2949 3336 5.509716 TGATGCAATGTTGATCAGAATCC 57.490 39.130 0.00 0.00 0.00 3.01
2950 3337 4.951094 TGATGCAATGTTGATCAGAATCCA 59.049 37.500 0.00 0.00 0.00 3.41
2951 3338 4.976224 TGCAATGTTGATCAGAATCCAG 57.024 40.909 0.00 0.00 0.00 3.86
2952 3339 4.591929 TGCAATGTTGATCAGAATCCAGA 58.408 39.130 0.00 0.00 0.00 3.86
2953 3340 5.011586 TGCAATGTTGATCAGAATCCAGAA 58.988 37.500 0.00 0.00 0.00 3.02
2954 3341 5.655090 TGCAATGTTGATCAGAATCCAGAAT 59.345 36.000 0.00 0.00 0.00 2.40
2955 3342 6.183360 TGCAATGTTGATCAGAATCCAGAATC 60.183 38.462 0.00 0.00 0.00 2.52
2956 3343 6.735145 GCAATGTTGATCAGAATCCAGAATCC 60.735 42.308 0.00 0.00 0.00 3.01
2957 3344 5.705397 TGTTGATCAGAATCCAGAATCCT 57.295 39.130 0.00 0.00 0.00 3.24
2958 3345 5.434408 TGTTGATCAGAATCCAGAATCCTG 58.566 41.667 0.00 0.00 40.09 3.86
2959 3346 5.045359 TGTTGATCAGAATCCAGAATCCTGT 60.045 40.000 0.00 0.00 38.74 4.00
2960 3347 6.156775 TGTTGATCAGAATCCAGAATCCTGTA 59.843 38.462 0.00 0.00 38.74 2.74
2961 3348 6.416631 TGATCAGAATCCAGAATCCTGTAG 57.583 41.667 0.00 0.00 38.74 2.74
2962 3349 6.138967 TGATCAGAATCCAGAATCCTGTAGA 58.861 40.000 0.00 0.00 38.74 2.59
2963 3350 6.267242 TGATCAGAATCCAGAATCCTGTAGAG 59.733 42.308 0.00 0.00 38.74 2.43
2964 3351 4.343526 TCAGAATCCAGAATCCTGTAGAGC 59.656 45.833 0.00 0.00 38.74 4.09
2965 3352 3.645687 AGAATCCAGAATCCTGTAGAGCC 59.354 47.826 0.00 0.00 38.74 4.70
2966 3353 2.550277 TCCAGAATCCTGTAGAGCCA 57.450 50.000 0.00 0.00 38.74 4.75
2967 3354 2.832838 TCCAGAATCCTGTAGAGCCAA 58.167 47.619 0.00 0.00 38.74 4.52
2968 3355 3.181329 TCCAGAATCCTGTAGAGCCAAA 58.819 45.455 0.00 0.00 38.74 3.28
2969 3356 3.055094 TCCAGAATCCTGTAGAGCCAAAC 60.055 47.826 0.00 0.00 38.74 2.93
2970 3357 3.054802 CCAGAATCCTGTAGAGCCAAACT 60.055 47.826 0.00 0.00 38.74 2.66
2971 3358 4.187694 CAGAATCCTGTAGAGCCAAACTC 58.812 47.826 0.00 0.00 39.43 3.01
2972 3359 4.921337 CAGAATCCTGTAGAGCCAAACTCC 60.921 50.000 0.00 0.00 39.70 3.85
2973 3360 7.317159 CAGAATCCTGTAGAGCCAAACTCCA 62.317 48.000 0.00 0.00 39.70 3.86
2974 3361 8.702252 CAGAATCCTGTAGAGCCAAACTCCAA 62.702 46.154 0.00 0.00 39.70 3.53
2981 3368 1.268079 GAGCCAAACTCCAAACTGAGC 59.732 52.381 0.00 0.00 39.75 4.26
2982 3369 1.032014 GCCAAACTCCAAACTGAGCA 58.968 50.000 0.00 0.00 35.72 4.26
2983 3370 1.408702 GCCAAACTCCAAACTGAGCAA 59.591 47.619 0.00 0.00 35.72 3.91
2984 3371 2.036346 GCCAAACTCCAAACTGAGCAAT 59.964 45.455 0.00 0.00 35.72 3.56
2985 3372 3.493176 GCCAAACTCCAAACTGAGCAATT 60.493 43.478 0.00 0.00 35.72 2.32
2986 3373 4.053295 CCAAACTCCAAACTGAGCAATTG 58.947 43.478 0.00 0.00 35.72 2.32
2987 3374 4.053295 CAAACTCCAAACTGAGCAATTGG 58.947 43.478 7.72 6.06 43.97 3.16
2988 3375 1.615392 ACTCCAAACTGAGCAATTGGC 59.385 47.619 7.72 0.00 42.65 4.52
2989 3376 0.968405 TCCAAACTGAGCAATTGGCC 59.032 50.000 7.72 0.00 46.50 5.36
2990 3377 0.680618 CCAAACTGAGCAATTGGCCA 59.319 50.000 0.00 0.00 46.50 5.36
2991 3378 1.606224 CCAAACTGAGCAATTGGCCAC 60.606 52.381 3.88 0.00 46.50 5.01
2992 3379 1.342174 CAAACTGAGCAATTGGCCACT 59.658 47.619 3.88 0.00 46.50 4.00
2993 3380 0.963962 AACTGAGCAATTGGCCACTG 59.036 50.000 3.88 7.40 46.50 3.66
2994 3381 0.178981 ACTGAGCAATTGGCCACTGT 60.179 50.000 3.88 0.00 46.50 3.55
2995 3382 0.242825 CTGAGCAATTGGCCACTGTG 59.757 55.000 3.88 4.82 46.50 3.66
2996 3383 0.178995 TGAGCAATTGGCCACTGTGA 60.179 50.000 3.88 0.00 46.50 3.58
2997 3384 1.180029 GAGCAATTGGCCACTGTGAT 58.820 50.000 3.88 1.50 46.50 3.06
2998 3385 1.133790 GAGCAATTGGCCACTGTGATC 59.866 52.381 3.88 8.60 46.50 2.92
2999 3386 0.174162 GCAATTGGCCACTGTGATCC 59.826 55.000 3.88 10.40 36.11 3.36
3000 3387 1.843368 CAATTGGCCACTGTGATCCT 58.157 50.000 3.88 0.00 0.00 3.24
3001 3388 1.475280 CAATTGGCCACTGTGATCCTG 59.525 52.381 3.88 1.61 0.00 3.86
3002 3389 0.682209 ATTGGCCACTGTGATCCTGC 60.682 55.000 3.88 3.33 0.00 4.85
3003 3390 1.782201 TTGGCCACTGTGATCCTGCT 61.782 55.000 3.88 0.00 0.00 4.24
3004 3391 1.748122 GGCCACTGTGATCCTGCTG 60.748 63.158 9.86 0.00 0.00 4.41
3005 3392 2.404995 GCCACTGTGATCCTGCTGC 61.405 63.158 9.86 0.00 0.00 5.25
3006 3393 1.298993 CCACTGTGATCCTGCTGCT 59.701 57.895 9.86 0.00 0.00 4.24
3007 3394 0.322277 CCACTGTGATCCTGCTGCTT 60.322 55.000 9.86 0.00 0.00 3.91
3008 3395 1.531423 CACTGTGATCCTGCTGCTTT 58.469 50.000 0.32 0.00 0.00 3.51
3009 3396 1.199327 CACTGTGATCCTGCTGCTTTG 59.801 52.381 0.32 0.00 0.00 2.77
3010 3397 0.809385 CTGTGATCCTGCTGCTTTGG 59.191 55.000 0.00 0.80 0.00 3.28
3011 3398 0.401356 TGTGATCCTGCTGCTTTGGA 59.599 50.000 0.00 6.63 0.00 3.53
3012 3399 1.005097 TGTGATCCTGCTGCTTTGGAT 59.995 47.619 17.41 17.41 42.65 3.41
3013 3400 1.404391 GTGATCCTGCTGCTTTGGATG 59.596 52.381 20.62 0.00 40.33 3.51
3014 3401 0.384669 GATCCTGCTGCTTTGGATGC 59.615 55.000 20.62 12.00 40.33 3.91
3015 3402 0.033405 ATCCTGCTGCTTTGGATGCT 60.033 50.000 16.94 0.64 38.96 3.79
3016 3403 0.679002 TCCTGCTGCTTTGGATGCTC 60.679 55.000 0.00 0.00 0.00 4.26
3017 3404 1.664321 CCTGCTGCTTTGGATGCTCC 61.664 60.000 0.00 0.00 36.96 4.70
3018 3405 0.680280 CTGCTGCTTTGGATGCTCCT 60.680 55.000 0.00 0.00 37.46 3.69
3019 3406 0.620030 TGCTGCTTTGGATGCTCCTA 59.380 50.000 0.00 0.00 37.46 2.94
3020 3407 1.307097 GCTGCTTTGGATGCTCCTAG 58.693 55.000 0.00 0.00 37.46 3.02
3021 3408 1.407989 GCTGCTTTGGATGCTCCTAGT 60.408 52.381 0.00 0.00 37.46 2.57
3022 3409 2.943199 GCTGCTTTGGATGCTCCTAGTT 60.943 50.000 0.00 0.00 37.46 2.24
3023 3410 2.681848 CTGCTTTGGATGCTCCTAGTTG 59.318 50.000 4.21 0.00 37.46 3.16
3024 3411 2.040278 TGCTTTGGATGCTCCTAGTTGT 59.960 45.455 4.21 0.00 37.46 3.32
3025 3412 2.421424 GCTTTGGATGCTCCTAGTTGTG 59.579 50.000 4.21 0.00 37.46 3.33
3026 3413 3.869912 GCTTTGGATGCTCCTAGTTGTGA 60.870 47.826 4.21 0.00 37.46 3.58
3027 3414 4.521146 CTTTGGATGCTCCTAGTTGTGAT 58.479 43.478 4.21 0.00 37.46 3.06
3028 3415 5.674525 CTTTGGATGCTCCTAGTTGTGATA 58.325 41.667 4.21 0.00 37.46 2.15
3029 3416 5.894298 TTGGATGCTCCTAGTTGTGATAT 57.106 39.130 4.21 0.00 37.46 1.63
3030 3417 5.219343 TGGATGCTCCTAGTTGTGATATG 57.781 43.478 4.21 0.00 37.46 1.78
3031 3418 3.999663 GGATGCTCCTAGTTGTGATATGC 59.000 47.826 0.00 0.00 32.53 3.14
3032 3419 4.262808 GGATGCTCCTAGTTGTGATATGCT 60.263 45.833 0.00 0.00 32.53 3.79
3033 3420 4.760530 TGCTCCTAGTTGTGATATGCTT 57.239 40.909 0.00 0.00 0.00 3.91
3034 3421 4.445453 TGCTCCTAGTTGTGATATGCTTG 58.555 43.478 0.00 0.00 0.00 4.01
3035 3422 4.080919 TGCTCCTAGTTGTGATATGCTTGT 60.081 41.667 0.00 0.00 0.00 3.16
3036 3423 4.272018 GCTCCTAGTTGTGATATGCTTGTG 59.728 45.833 0.00 0.00 0.00 3.33
3037 3424 5.420725 TCCTAGTTGTGATATGCTTGTGT 57.579 39.130 0.00 0.00 0.00 3.72
3038 3425 5.804639 TCCTAGTTGTGATATGCTTGTGTT 58.195 37.500 0.00 0.00 0.00 3.32
3039 3426 6.237901 TCCTAGTTGTGATATGCTTGTGTTT 58.762 36.000 0.00 0.00 0.00 2.83
3040 3427 6.371548 TCCTAGTTGTGATATGCTTGTGTTTC 59.628 38.462 0.00 0.00 0.00 2.78
3041 3428 6.372659 CCTAGTTGTGATATGCTTGTGTTTCT 59.627 38.462 0.00 0.00 0.00 2.52
3042 3429 6.639632 AGTTGTGATATGCTTGTGTTTCTT 57.360 33.333 0.00 0.00 0.00 2.52
3043 3430 6.672147 AGTTGTGATATGCTTGTGTTTCTTC 58.328 36.000 0.00 0.00 0.00 2.87
3044 3431 6.488006 AGTTGTGATATGCTTGTGTTTCTTCT 59.512 34.615 0.00 0.00 0.00 2.85
3045 3432 6.245115 TGTGATATGCTTGTGTTTCTTCTG 57.755 37.500 0.00 0.00 0.00 3.02
3046 3433 5.091431 GTGATATGCTTGTGTTTCTTCTGC 58.909 41.667 0.00 0.00 0.00 4.26
3047 3434 5.005740 TGATATGCTTGTGTTTCTTCTGCT 58.994 37.500 0.00 0.00 0.00 4.24
3048 3435 3.911661 ATGCTTGTGTTTCTTCTGCTC 57.088 42.857 0.00 0.00 0.00 4.26
3049 3436 2.642427 TGCTTGTGTTTCTTCTGCTCA 58.358 42.857 0.00 0.00 0.00 4.26
3050 3437 2.355756 TGCTTGTGTTTCTTCTGCTCAC 59.644 45.455 0.00 0.00 0.00 3.51
3051 3438 2.615912 GCTTGTGTTTCTTCTGCTCACT 59.384 45.455 0.00 0.00 0.00 3.41
3052 3439 3.547613 GCTTGTGTTTCTTCTGCTCACTG 60.548 47.826 0.00 0.00 0.00 3.66
3053 3440 2.564771 TGTGTTTCTTCTGCTCACTGG 58.435 47.619 0.00 0.00 0.00 4.00
3054 3441 1.265365 GTGTTTCTTCTGCTCACTGGC 59.735 52.381 0.00 0.00 0.00 4.85
3055 3442 1.134128 TGTTTCTTCTGCTCACTGGCA 60.134 47.619 0.00 0.00 40.15 4.92
3064 3451 3.921119 TGCTCACTGGCAGTTTTTATG 57.079 42.857 19.43 5.75 37.29 1.90
3065 3452 2.030007 TGCTCACTGGCAGTTTTTATGC 60.030 45.455 19.43 15.21 43.09 3.14
3066 3453 2.229784 GCTCACTGGCAGTTTTTATGCT 59.770 45.455 19.43 0.00 43.35 3.79
3067 3454 3.829948 CTCACTGGCAGTTTTTATGCTG 58.170 45.455 19.43 3.33 43.35 4.41
3076 3463 4.801891 CAGTTTTTATGCTGCATGACACT 58.198 39.130 24.59 16.69 0.00 3.55
3077 3464 4.855388 CAGTTTTTATGCTGCATGACACTC 59.145 41.667 24.59 10.53 0.00 3.51
3078 3465 4.082571 AGTTTTTATGCTGCATGACACTCC 60.083 41.667 24.59 6.87 0.00 3.85
3079 3466 3.354948 TTTATGCTGCATGACACTCCT 57.645 42.857 24.59 0.00 0.00 3.69
3080 3467 4.486125 TTTATGCTGCATGACACTCCTA 57.514 40.909 24.59 0.00 0.00 2.94
3081 3468 2.616634 ATGCTGCATGACACTCCTAG 57.383 50.000 15.44 0.00 0.00 3.02
3082 3469 1.269958 TGCTGCATGACACTCCTAGT 58.730 50.000 0.00 0.00 0.00 2.57
3083 3470 1.625315 TGCTGCATGACACTCCTAGTT 59.375 47.619 0.00 0.00 0.00 2.24
3084 3471 2.275318 GCTGCATGACACTCCTAGTTC 58.725 52.381 0.00 0.00 0.00 3.01
3085 3472 2.354103 GCTGCATGACACTCCTAGTTCA 60.354 50.000 0.00 0.00 0.00 3.18
3086 3473 3.681034 GCTGCATGACACTCCTAGTTCAT 60.681 47.826 0.00 0.00 31.17 2.57
3087 3474 3.865446 TGCATGACACTCCTAGTTCATG 58.135 45.455 18.02 18.02 41.36 3.07
3088 3475 3.515104 TGCATGACACTCCTAGTTCATGA 59.485 43.478 22.33 0.00 41.18 3.07
3089 3476 4.162888 TGCATGACACTCCTAGTTCATGAT 59.837 41.667 22.33 0.00 41.18 2.45
3090 3477 4.510711 GCATGACACTCCTAGTTCATGATG 59.489 45.833 22.33 0.00 41.18 3.07
3091 3478 5.668471 CATGACACTCCTAGTTCATGATGT 58.332 41.667 17.74 0.00 41.18 3.06
3092 3479 5.077134 TGACACTCCTAGTTCATGATGTG 57.923 43.478 0.00 0.86 0.00 3.21
3093 3480 4.081476 TGACACTCCTAGTTCATGATGTGG 60.081 45.833 0.00 0.00 0.00 4.17
3094 3481 4.096681 ACACTCCTAGTTCATGATGTGGA 58.903 43.478 0.00 1.83 0.00 4.02
3095 3482 4.718774 ACACTCCTAGTTCATGATGTGGAT 59.281 41.667 0.00 0.00 0.00 3.41
3096 3483 5.055144 CACTCCTAGTTCATGATGTGGATG 58.945 45.833 0.00 0.86 0.00 3.51
3097 3484 4.102210 ACTCCTAGTTCATGATGTGGATGG 59.898 45.833 0.00 0.00 0.00 3.51
3098 3485 4.040047 TCCTAGTTCATGATGTGGATGGT 58.960 43.478 0.00 0.00 0.00 3.55
3099 3486 4.101585 TCCTAGTTCATGATGTGGATGGTC 59.898 45.833 0.00 0.00 0.00 4.02
3100 3487 4.102210 CCTAGTTCATGATGTGGATGGTCT 59.898 45.833 0.00 0.00 0.00 3.85
3101 3488 5.305386 CCTAGTTCATGATGTGGATGGTCTA 59.695 44.000 0.00 0.00 0.00 2.59
3102 3489 5.901413 AGTTCATGATGTGGATGGTCTAT 57.099 39.130 0.00 0.00 0.00 1.98
3103 3490 7.179160 CCTAGTTCATGATGTGGATGGTCTATA 59.821 40.741 0.00 0.00 0.00 1.31
3104 3491 7.002250 AGTTCATGATGTGGATGGTCTATAG 57.998 40.000 0.00 0.00 0.00 1.31
3105 3492 5.411831 TCATGATGTGGATGGTCTATAGC 57.588 43.478 0.00 0.00 0.00 2.97
3106 3493 5.089434 TCATGATGTGGATGGTCTATAGCT 58.911 41.667 0.00 0.00 0.00 3.32
3107 3494 5.186603 TCATGATGTGGATGGTCTATAGCTC 59.813 44.000 0.00 0.00 0.00 4.09
3108 3495 4.482990 TGATGTGGATGGTCTATAGCTCA 58.517 43.478 0.00 0.00 0.00 4.26
3109 3496 5.089434 TGATGTGGATGGTCTATAGCTCAT 58.911 41.667 0.00 7.17 0.00 2.90
3110 3497 6.256053 TGATGTGGATGGTCTATAGCTCATA 58.744 40.000 0.00 0.00 0.00 2.15
3111 3498 6.379417 TGATGTGGATGGTCTATAGCTCATAG 59.621 42.308 0.00 0.00 38.42 2.23
3112 3499 4.464244 TGTGGATGGTCTATAGCTCATAGC 59.536 45.833 0.00 0.00 42.84 2.97
3125 3512 4.540359 GCTCATAGCTCAGAAGATGGAT 57.460 45.455 0.00 0.00 38.45 3.41
3126 3513 5.657826 GCTCATAGCTCAGAAGATGGATA 57.342 43.478 0.00 0.00 38.45 2.59
3127 3514 6.224665 GCTCATAGCTCAGAAGATGGATAT 57.775 41.667 0.00 0.00 38.45 1.63
3128 3515 7.345422 GCTCATAGCTCAGAAGATGGATATA 57.655 40.000 0.00 0.00 38.45 0.86
3129 3516 7.954835 GCTCATAGCTCAGAAGATGGATATAT 58.045 38.462 0.00 0.00 38.45 0.86
3130 3517 7.868922 GCTCATAGCTCAGAAGATGGATATATG 59.131 40.741 0.00 0.00 38.45 1.78
3131 3518 8.835550 TCATAGCTCAGAAGATGGATATATGT 57.164 34.615 0.00 0.00 0.00 2.29
3132 3519 8.911965 TCATAGCTCAGAAGATGGATATATGTC 58.088 37.037 0.00 0.00 0.00 3.06
3133 3520 8.916062 CATAGCTCAGAAGATGGATATATGTCT 58.084 37.037 0.00 0.00 0.00 3.41
3136 3523 9.491406 AGCTCAGAAGATGGATATATGTCTATT 57.509 33.333 0.00 0.00 0.00 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 9.865484 GTTAACAGTAAAACTTTGCAACAAAAA 57.135 25.926 0.00 0.00 0.00 1.94
17 18 8.215132 CGTTAACAGTAAAACTTTGCAACAAAA 58.785 29.630 0.00 0.00 0.00 2.44
18 19 7.381678 ACGTTAACAGTAAAACTTTGCAACAAA 59.618 29.630 0.00 0.00 0.00 2.83
19 20 6.862090 ACGTTAACAGTAAAACTTTGCAACAA 59.138 30.769 0.00 0.00 0.00 2.83
20 21 6.380190 ACGTTAACAGTAAAACTTTGCAACA 58.620 32.000 0.00 0.00 0.00 3.33
21 22 6.858104 ACGTTAACAGTAAAACTTTGCAAC 57.142 33.333 0.00 0.00 0.00 4.17
34 35 3.071479 CTGCAACCCATACGTTAACAGT 58.929 45.455 6.39 7.30 30.26 3.55
40 41 1.296056 GCGTCTGCAACCCATACGTT 61.296 55.000 0.00 0.00 43.48 3.99
44 45 2.125310 CCGCGTCTGCAACCCATA 60.125 61.111 4.92 0.00 42.97 2.74
64 65 1.804748 GTAACTCAAGGGAACGGCAAG 59.195 52.381 0.00 0.00 0.00 4.01
67 68 2.109425 ATGTAACTCAAGGGAACGGC 57.891 50.000 0.00 0.00 0.00 5.68
102 117 2.124403 CATGGCCCAGAGCACCTC 60.124 66.667 0.00 0.00 46.50 3.85
108 123 2.996631 GCTATAATCCATGGCCCAGAG 58.003 52.381 6.96 2.62 35.17 3.35
114 129 2.289694 ACGAGTGGCTATAATCCATGGC 60.290 50.000 6.96 0.00 40.28 4.40
116 131 4.177026 GCTACGAGTGGCTATAATCCATG 58.823 47.826 4.29 0.00 35.81 3.66
173 190 8.531982 GCCCACCTCTTTTCTTCTTTATTATTT 58.468 33.333 0.00 0.00 0.00 1.40
191 212 4.767255 CAGTCGGCTGCCCACCTC 62.767 72.222 14.12 0.00 35.77 3.85
194 215 2.536997 ATTACCAGTCGGCTGCCCAC 62.537 60.000 12.68 11.24 41.26 4.61
198 219 0.107654 AGGAATTACCAGTCGGCTGC 60.108 55.000 12.68 0.00 41.26 5.25
199 220 1.656652 CAGGAATTACCAGTCGGCTG 58.343 55.000 10.88 10.88 42.04 4.85
200 221 0.541863 CCAGGAATTACCAGTCGGCT 59.458 55.000 0.00 0.00 42.04 5.52
202 223 0.463833 GCCCAGGAATTACCAGTCGG 60.464 60.000 0.00 0.00 42.04 4.79
203 224 0.463833 GGCCCAGGAATTACCAGTCG 60.464 60.000 0.00 0.00 42.04 4.18
205 226 1.607612 CGGCCCAGGAATTACCAGT 59.392 57.895 0.00 0.00 42.04 4.00
291 315 2.294078 GGTGGTGGTGGAGGAGGAG 61.294 68.421 0.00 0.00 0.00 3.69
314 338 1.139947 GCTCTCTCCGTTTCTCCCG 59.860 63.158 0.00 0.00 0.00 5.14
315 339 1.258445 TGGCTCTCTCCGTTTCTCCC 61.258 60.000 0.00 0.00 0.00 4.30
316 340 0.608640 TTGGCTCTCTCCGTTTCTCC 59.391 55.000 0.00 0.00 0.00 3.71
324 348 5.689835 AGGATTTTTCTATTGGCTCTCTCC 58.310 41.667 0.00 0.00 0.00 3.71
330 354 7.409358 AGAAAGAGAGGATTTTTCTATTGGCT 58.591 34.615 0.00 0.00 38.88 4.75
347 371 7.043125 CGCGATTGATTGATAGAAAGAAAGAGA 60.043 37.037 0.00 0.00 0.00 3.10
354 378 4.507756 TCCACGCGATTGATTGATAGAAAG 59.492 41.667 15.93 0.00 0.00 2.62
355 379 4.438148 TCCACGCGATTGATTGATAGAAA 58.562 39.130 15.93 0.00 0.00 2.52
356 380 4.051237 CTCCACGCGATTGATTGATAGAA 58.949 43.478 15.93 0.00 0.00 2.10
359 383 2.364002 TCCTCCACGCGATTGATTGATA 59.636 45.455 15.93 0.00 0.00 2.15
398 424 3.807368 ACCGGAGAGGGTTCCTTG 58.193 61.111 9.46 0.00 46.96 3.61
407 433 3.441290 AGGCGACGAACCGGAGAG 61.441 66.667 9.46 0.00 0.00 3.20
408 434 3.744719 CAGGCGACGAACCGGAGA 61.745 66.667 9.46 0.00 0.00 3.71
412 438 3.479269 GAAGCAGGCGACGAACCG 61.479 66.667 0.00 0.00 0.00 4.44
415 441 1.374252 GAAGGAAGCAGGCGACGAA 60.374 57.895 0.00 0.00 0.00 3.85
416 442 2.261671 GAAGGAAGCAGGCGACGA 59.738 61.111 0.00 0.00 0.00 4.20
417 443 2.815647 GGAAGGAAGCAGGCGACG 60.816 66.667 0.00 0.00 0.00 5.12
419 445 3.717294 GGGGAAGGAAGCAGGCGA 61.717 66.667 0.00 0.00 0.00 5.54
421 447 1.000866 ATTGGGGAAGGAAGCAGGC 59.999 57.895 0.00 0.00 0.00 4.85
422 448 0.396278 GGATTGGGGAAGGAAGCAGG 60.396 60.000 0.00 0.00 0.00 4.85
423 449 0.627986 AGGATTGGGGAAGGAAGCAG 59.372 55.000 0.00 0.00 0.00 4.24
425 451 0.464554 CGAGGATTGGGGAAGGAAGC 60.465 60.000 0.00 0.00 0.00 3.86
431 459 4.483243 GCGGCGAGGATTGGGGAA 62.483 66.667 12.98 0.00 0.00 3.97
468 499 3.439540 TACCGTACCGTGGCGTCC 61.440 66.667 0.00 0.00 0.00 4.79
469 500 2.202479 GTACCGTACCGTGGCGTC 60.202 66.667 0.00 0.00 0.00 5.19
513 545 1.792651 AGAGGAGGGGAGAGGATAAGG 59.207 57.143 0.00 0.00 0.00 2.69
516 548 1.462426 GGAGAGGAGGGGAGAGGATA 58.538 60.000 0.00 0.00 0.00 2.59
536 568 3.459063 GTCGGTTCCTCTCCGGGG 61.459 72.222 0.00 0.00 46.82 5.73
538 570 3.459063 GGGTCGGTTCCTCTCCGG 61.459 72.222 0.00 0.00 46.82 5.14
548 580 1.818959 TTCGATTCGGTTGGGTCGGT 61.819 55.000 6.18 0.00 35.01 4.69
549 581 0.461339 ATTCGATTCGGTTGGGTCGG 60.461 55.000 6.18 0.00 35.01 4.79
550 582 0.928229 GATTCGATTCGGTTGGGTCG 59.072 55.000 6.18 0.00 35.55 4.79
551 583 1.296727 GGATTCGATTCGGTTGGGTC 58.703 55.000 6.18 0.00 0.00 4.46
602 648 7.108847 GGGATTCTTGGACCAATCTATCTATG 58.891 42.308 7.54 0.00 30.85 2.23
617 663 3.319122 GGATTCGATTTGGGGATTCTTGG 59.681 47.826 0.00 0.00 0.00 3.61
659 705 9.067986 ACGAGAAGGATAAACAAAGAAAGAAAT 57.932 29.630 0.00 0.00 0.00 2.17
660 706 8.446599 ACGAGAAGGATAAACAAAGAAAGAAA 57.553 30.769 0.00 0.00 0.00 2.52
770 831 7.750655 AGAAGACAGGAAAGGTAAAGAAGAAT 58.249 34.615 0.00 0.00 0.00 2.40
771 832 7.138054 AGAAGACAGGAAAGGTAAAGAAGAA 57.862 36.000 0.00 0.00 0.00 2.52
772 833 6.749036 AGAAGACAGGAAAGGTAAAGAAGA 57.251 37.500 0.00 0.00 0.00 2.87
773 834 6.428465 GGAAGAAGACAGGAAAGGTAAAGAAG 59.572 42.308 0.00 0.00 0.00 2.85
774 835 6.101296 AGGAAGAAGACAGGAAAGGTAAAGAA 59.899 38.462 0.00 0.00 0.00 2.52
775 836 5.607171 AGGAAGAAGACAGGAAAGGTAAAGA 59.393 40.000 0.00 0.00 0.00 2.52
776 837 5.870706 AGGAAGAAGACAGGAAAGGTAAAG 58.129 41.667 0.00 0.00 0.00 1.85
777 838 5.221864 GGAGGAAGAAGACAGGAAAGGTAAA 60.222 44.000 0.00 0.00 0.00 2.01
778 839 4.286291 GGAGGAAGAAGACAGGAAAGGTAA 59.714 45.833 0.00 0.00 0.00 2.85
779 840 3.838903 GGAGGAAGAAGACAGGAAAGGTA 59.161 47.826 0.00 0.00 0.00 3.08
780 841 2.640332 GGAGGAAGAAGACAGGAAAGGT 59.360 50.000 0.00 0.00 0.00 3.50
781 842 2.026729 GGGAGGAAGAAGACAGGAAAGG 60.027 54.545 0.00 0.00 0.00 3.11
782 843 2.354203 CGGGAGGAAGAAGACAGGAAAG 60.354 54.545 0.00 0.00 0.00 2.62
819 893 1.003233 AAGGAAGCCGGTCAGAAGC 60.003 57.895 1.90 0.00 0.00 3.86
831 905 6.293900 GCAAGAAGAAGAAAAGGAGAAGGAAG 60.294 42.308 0.00 0.00 0.00 3.46
832 906 5.532779 GCAAGAAGAAGAAAAGGAGAAGGAA 59.467 40.000 0.00 0.00 0.00 3.36
841 915 3.294943 CACGCTGCAAGAAGAAGAAAAG 58.705 45.455 0.00 0.00 34.07 2.27
843 917 1.603802 CCACGCTGCAAGAAGAAGAAA 59.396 47.619 0.00 0.00 34.07 2.52
889 964 2.418083 CCAAATCCTTCCTGCGCCC 61.418 63.158 4.18 0.00 0.00 6.13
891 966 2.491621 GCCAAATCCTTCCTGCGC 59.508 61.111 0.00 0.00 0.00 6.09
892 967 2.764314 CGGCCAAATCCTTCCTGCG 61.764 63.158 2.24 0.00 0.00 5.18
893 968 2.418083 CCGGCCAAATCCTTCCTGC 61.418 63.158 2.24 0.00 0.00 4.85
894 969 2.418083 GCCGGCCAAATCCTTCCTG 61.418 63.158 18.11 0.00 0.00 3.86
895 970 2.043953 GCCGGCCAAATCCTTCCT 60.044 61.111 18.11 0.00 0.00 3.36
896 971 3.518068 CGCCGGCCAAATCCTTCC 61.518 66.667 23.46 0.00 0.00 3.46
897 972 3.518068 CCGCCGGCCAAATCCTTC 61.518 66.667 23.46 0.00 0.00 3.46
914 989 3.917760 CGACCAGATCCCGGAGCC 61.918 72.222 0.73 0.00 0.00 4.70
919 994 0.739813 GACCAAACGACCAGATCCCG 60.740 60.000 0.00 0.00 0.00 5.14
927 1002 4.065789 AGAAGAAGAATGACCAAACGACC 58.934 43.478 0.00 0.00 0.00 4.79
936 1016 9.339492 GATCAAATCAACAAGAAGAAGAATGAC 57.661 33.333 0.00 0.00 0.00 3.06
939 1019 8.233190 GTCGATCAAATCAACAAGAAGAAGAAT 58.767 33.333 0.00 0.00 0.00 2.40
952 1032 4.503910 CACCTACCAGTCGATCAAATCAA 58.496 43.478 0.00 0.00 0.00 2.57
953 1033 3.118775 CCACCTACCAGTCGATCAAATCA 60.119 47.826 0.00 0.00 0.00 2.57
954 1034 3.458189 CCACCTACCAGTCGATCAAATC 58.542 50.000 0.00 0.00 0.00 2.17
955 1035 2.170607 CCCACCTACCAGTCGATCAAAT 59.829 50.000 0.00 0.00 0.00 2.32
956 1036 1.553248 CCCACCTACCAGTCGATCAAA 59.447 52.381 0.00 0.00 0.00 2.69
985 1065 4.492160 CATGGCTGCCGCTGCTTG 62.492 66.667 20.06 14.39 38.71 4.01
986 1066 4.728110 TCATGGCTGCCGCTGCTT 62.728 61.111 20.06 7.20 38.71 3.91
987 1067 4.501285 ATCATGGCTGCCGCTGCT 62.501 61.111 20.06 2.87 38.71 4.24
988 1068 4.266070 CATCATGGCTGCCGCTGC 62.266 66.667 14.98 13.48 36.09 5.25
1212 1313 2.035783 GCCTCCTTGGTGAACCCC 59.964 66.667 0.00 0.00 38.35 4.95
1239 1340 1.527370 GATCCCCCGGAACTCCTTG 59.473 63.158 0.73 0.00 34.34 3.61
1797 1898 4.824166 CGGTACACGTCCTCCGCG 62.824 72.222 0.00 0.00 41.42 6.46
1863 1964 2.109799 CAGCGCTCGGGGATGAAT 59.890 61.111 7.13 0.00 33.81 2.57
2004 2105 1.226802 CACGGACAGCTCATCGAGG 60.227 63.158 6.18 0.00 0.00 4.63
2130 2231 7.118101 GTCTCCTACAAGAATATATCGTCGACT 59.882 40.741 14.70 0.00 0.00 4.18
2157 2261 1.399744 TACATACCGGCAGCTCCTGG 61.400 60.000 0.00 0.00 35.52 4.45
2165 2269 5.024785 TCAAATGTACATACATACCGGCA 57.975 39.130 9.21 0.00 45.55 5.69
2193 2297 1.928868 CAACAGGAGAAGGGCCAATT 58.071 50.000 6.18 0.00 0.00 2.32
2194 2298 0.613012 GCAACAGGAGAAGGGCCAAT 60.613 55.000 6.18 0.00 0.00 3.16
2217 2321 4.213270 ACCGCAAATTATCCATCATACACG 59.787 41.667 0.00 0.00 0.00 4.49
2239 2343 2.032620 TCCTTCCTTCCTGATCGCTAC 58.967 52.381 0.00 0.00 0.00 3.58
2362 2466 6.963796 CGTATACGTATCAAGTACCCTCTTT 58.036 40.000 17.16 0.00 34.11 2.52
2363 2467 6.551385 CGTATACGTATCAAGTACCCTCTT 57.449 41.667 17.16 0.00 34.11 2.85
2379 2483 2.193447 AGCAATGCACTGACGTATACG 58.807 47.619 23.24 23.24 46.33 3.06
2380 2484 3.001330 GGAAGCAATGCACTGACGTATAC 59.999 47.826 8.35 0.00 0.00 1.47
2381 2485 3.194861 GGAAGCAATGCACTGACGTATA 58.805 45.455 8.35 0.00 0.00 1.47
2382 2486 2.009774 GGAAGCAATGCACTGACGTAT 58.990 47.619 8.35 0.00 0.00 3.06
2384 2488 0.534877 TGGAAGCAATGCACTGACGT 60.535 50.000 8.35 0.00 0.00 4.34
2386 2490 1.527034 TCTGGAAGCAATGCACTGAC 58.473 50.000 8.35 0.00 0.00 3.51
2389 2493 1.816835 CACATCTGGAAGCAATGCACT 59.183 47.619 8.35 0.00 0.00 4.40
2429 2537 8.461222 TGCAAATAAACATATGTTCCTTCTGAG 58.539 33.333 21.02 8.26 37.25 3.35
2430 2538 8.347004 TGCAAATAAACATATGTTCCTTCTGA 57.653 30.769 21.02 2.15 37.25 3.27
2431 2539 8.246180 ACTGCAAATAAACATATGTTCCTTCTG 58.754 33.333 21.02 14.83 37.25 3.02
2511 2878 2.961062 AGACAATTTTGCTGCTCCAAGT 59.039 40.909 0.00 0.00 0.00 3.16
2525 2892 9.323985 GTCTGATGATAAGAAGCTAAGACAATT 57.676 33.333 0.00 0.00 33.41 2.32
2526 2893 7.651304 CGTCTGATGATAAGAAGCTAAGACAAT 59.349 37.037 0.00 0.00 32.89 2.71
2529 2896 6.730175 TCGTCTGATGATAAGAAGCTAAGAC 58.270 40.000 0.00 0.00 0.00 3.01
2531 2898 7.993821 TTTCGTCTGATGATAAGAAGCTAAG 57.006 36.000 0.00 0.00 0.00 2.18
2533 2900 7.320399 TGTTTTCGTCTGATGATAAGAAGCTA 58.680 34.615 0.00 0.00 0.00 3.32
2534 2901 6.166279 TGTTTTCGTCTGATGATAAGAAGCT 58.834 36.000 0.00 0.00 0.00 3.74
2535 2902 6.408858 TGTTTTCGTCTGATGATAAGAAGC 57.591 37.500 0.00 0.00 0.00 3.86
2536 2903 9.483062 GATTTGTTTTCGTCTGATGATAAGAAG 57.517 33.333 10.73 0.00 0.00 2.85
2537 2904 9.219603 AGATTTGTTTTCGTCTGATGATAAGAA 57.780 29.630 8.02 8.02 0.00 2.52
2538 2905 8.777865 AGATTTGTTTTCGTCTGATGATAAGA 57.222 30.769 0.00 0.00 0.00 2.10
2539 2906 9.483062 GAAGATTTGTTTTCGTCTGATGATAAG 57.517 33.333 0.00 0.00 0.00 1.73
2540 2907 8.450964 GGAAGATTTGTTTTCGTCTGATGATAA 58.549 33.333 0.00 0.00 0.00 1.75
2542 2909 6.430925 TGGAAGATTTGTTTTCGTCTGATGAT 59.569 34.615 0.00 0.00 0.00 2.45
2544 2911 5.853282 GTGGAAGATTTGTTTTCGTCTGATG 59.147 40.000 0.00 0.00 0.00 3.07
2557 2924 4.092529 CACGAGAGACATGTGGAAGATTTG 59.907 45.833 1.15 0.00 0.00 2.32
2560 2927 2.828520 ACACGAGAGACATGTGGAAGAT 59.171 45.455 1.15 0.00 37.92 2.40
2562 2929 2.029918 TCACACGAGAGACATGTGGAAG 60.030 50.000 1.15 0.00 43.21 3.46
2568 2935 3.778618 ACATCATCACACGAGAGACATG 58.221 45.455 0.00 0.00 0.00 3.21
2569 2936 5.781210 ATACATCATCACACGAGAGACAT 57.219 39.130 0.00 0.00 0.00 3.06
2572 2939 6.884280 ACATATACATCATCACACGAGAGA 57.116 37.500 0.00 0.00 0.00 3.10
2575 2942 8.246871 AGGAATACATATACATCATCACACGAG 58.753 37.037 0.00 0.00 0.00 4.18
2576 2943 8.028938 CAGGAATACATATACATCATCACACGA 58.971 37.037 0.00 0.00 0.00 4.35
2577 2944 7.814587 ACAGGAATACATATACATCATCACACG 59.185 37.037 0.00 0.00 0.00 4.49
2578 2945 8.929746 CACAGGAATACATATACATCATCACAC 58.070 37.037 0.00 0.00 0.00 3.82
2580 2947 8.929746 CACACAGGAATACATATACATCATCAC 58.070 37.037 0.00 0.00 0.00 3.06
2581 2948 8.869109 TCACACAGGAATACATATACATCATCA 58.131 33.333 0.00 0.00 0.00 3.07
2582 2949 9.881649 ATCACACAGGAATACATATACATCATC 57.118 33.333 0.00 0.00 0.00 2.92
2583 2950 9.662947 CATCACACAGGAATACATATACATCAT 57.337 33.333 0.00 0.00 0.00 2.45
2585 2952 9.881649 ATCATCACACAGGAATACATATACATC 57.118 33.333 0.00 0.00 0.00 3.06
2586 2953 9.662947 CATCATCACACAGGAATACATATACAT 57.337 33.333 0.00 0.00 0.00 2.29
2587 2954 8.650490 ACATCATCACACAGGAATACATATACA 58.350 33.333 0.00 0.00 0.00 2.29
2588 2955 8.929746 CACATCATCACACAGGAATACATATAC 58.070 37.037 0.00 0.00 0.00 1.47
2589 2956 7.603784 GCACATCATCACACAGGAATACATATA 59.396 37.037 0.00 0.00 0.00 0.86
2590 2957 6.429078 GCACATCATCACACAGGAATACATAT 59.571 38.462 0.00 0.00 0.00 1.78
2591 2958 5.759763 GCACATCATCACACAGGAATACATA 59.240 40.000 0.00 0.00 0.00 2.29
2592 2959 4.577693 GCACATCATCACACAGGAATACAT 59.422 41.667 0.00 0.00 0.00 2.29
2593 2960 3.940852 GCACATCATCACACAGGAATACA 59.059 43.478 0.00 0.00 0.00 2.29
2594 2961 4.034858 CAGCACATCATCACACAGGAATAC 59.965 45.833 0.00 0.00 0.00 1.89
2630 3006 7.396540 AATATACCCTTGCAAGAAAGAACAG 57.603 36.000 28.05 8.01 0.00 3.16
2638 3014 8.884323 AGATCTTGATAATATACCCTTGCAAGA 58.116 33.333 28.05 8.51 42.90 3.02
2681 3057 8.846943 ATAAGATTTTGTTGAATCCCCAAAAC 57.153 30.769 8.61 5.01 39.90 2.43
2725 3101 6.267471 AGTGGTTATTCAAGATTCTTGCCAAA 59.733 34.615 19.53 10.65 0.00 3.28
2728 3104 5.393461 CCAGTGGTTATTCAAGATTCTTGCC 60.393 44.000 19.53 14.88 0.00 4.52
2731 3107 7.363268 GCAATCCAGTGGTTATTCAAGATTCTT 60.363 37.037 9.54 0.00 0.00 2.52
2738 3114 6.832900 TCATATGCAATCCAGTGGTTATTCAA 59.167 34.615 9.54 0.00 0.00 2.69
2752 3128 6.147581 CAGGCAACAAGTATCATATGCAATC 58.852 40.000 0.00 0.00 41.41 2.67
2756 3132 3.567164 AGCAGGCAACAAGTATCATATGC 59.433 43.478 0.00 0.00 41.41 3.14
2759 3135 9.822185 CATATATAGCAGGCAACAAGTATCATA 57.178 33.333 0.00 0.00 41.41 2.15
2760 3136 8.324306 ACATATATAGCAGGCAACAAGTATCAT 58.676 33.333 0.00 0.00 41.41 2.45
2763 3139 7.453393 ACACATATATAGCAGGCAACAAGTAT 58.547 34.615 0.00 0.00 41.41 2.12
2770 3146 5.567037 AGGAACACATATATAGCAGGCAA 57.433 39.130 0.00 0.00 0.00 4.52
2779 3155 7.070696 TGCTGTTACAGGTAGGAACACATATAT 59.929 37.037 14.63 0.00 31.21 0.86
2785 3166 3.396260 TGCTGTTACAGGTAGGAACAC 57.604 47.619 14.63 0.00 31.21 3.32
2856 3237 8.792830 ATATAAATACCCATTCGATCCACAAG 57.207 34.615 0.00 0.00 0.00 3.16
2860 3241 8.146053 ACAGATATAAATACCCATTCGATCCA 57.854 34.615 0.00 0.00 0.00 3.41
2887 3274 3.610040 ACAGCGGATCACACAGAATTA 57.390 42.857 0.00 0.00 0.00 1.40
2888 3275 2.479566 ACAGCGGATCACACAGAATT 57.520 45.000 0.00 0.00 0.00 2.17
2901 3288 4.231260 TCACATCATGAAGCTAACAGCGG 61.231 47.826 0.00 0.00 38.30 5.52
2902 3289 2.931969 TCACATCATGAAGCTAACAGCG 59.068 45.455 0.00 0.00 38.30 5.18
2903 3290 4.573607 TCATCACATCATGAAGCTAACAGC 59.426 41.667 0.00 0.00 41.93 4.40
2904 3291 6.482308 TCATCATCACATCATGAAGCTAACAG 59.518 38.462 0.00 0.00 41.93 3.16
2905 3292 6.350906 TCATCATCACATCATGAAGCTAACA 58.649 36.000 0.00 0.00 41.93 2.41
2906 3293 6.856135 TCATCATCACATCATGAAGCTAAC 57.144 37.500 0.00 0.00 41.93 2.34
2907 3294 6.072673 GCATCATCATCACATCATGAAGCTAA 60.073 38.462 0.00 0.00 41.93 3.09
2908 3295 5.411669 GCATCATCATCACATCATGAAGCTA 59.588 40.000 0.00 0.00 41.93 3.32
2909 3296 4.216472 GCATCATCATCACATCATGAAGCT 59.784 41.667 0.00 0.00 41.93 3.74
2910 3297 4.023193 TGCATCATCATCACATCATGAAGC 60.023 41.667 0.00 0.00 41.93 3.86
2911 3298 5.689383 TGCATCATCATCACATCATGAAG 57.311 39.130 0.00 0.00 41.93 3.02
2912 3299 6.040391 ACATTGCATCATCATCACATCATGAA 59.960 34.615 0.00 0.00 41.93 2.57
2913 3300 5.534654 ACATTGCATCATCATCACATCATGA 59.465 36.000 0.00 0.00 43.13 3.07
2914 3301 5.772521 ACATTGCATCATCATCACATCATG 58.227 37.500 0.00 0.00 0.00 3.07
2915 3302 6.040391 TCAACATTGCATCATCATCACATCAT 59.960 34.615 0.00 0.00 0.00 2.45
2916 3303 5.358442 TCAACATTGCATCATCATCACATCA 59.642 36.000 0.00 0.00 0.00 3.07
2917 3304 5.827666 TCAACATTGCATCATCATCACATC 58.172 37.500 0.00 0.00 0.00 3.06
2918 3305 5.845391 TCAACATTGCATCATCATCACAT 57.155 34.783 0.00 0.00 0.00 3.21
2919 3306 5.358442 TGATCAACATTGCATCATCATCACA 59.642 36.000 0.00 0.00 0.00 3.58
2920 3307 5.827666 TGATCAACATTGCATCATCATCAC 58.172 37.500 0.00 0.00 0.00 3.06
2921 3308 5.825679 TCTGATCAACATTGCATCATCATCA 59.174 36.000 0.00 0.00 30.31 3.07
2922 3309 6.313744 TCTGATCAACATTGCATCATCATC 57.686 37.500 0.00 0.00 30.31 2.92
2923 3310 6.709018 TTCTGATCAACATTGCATCATCAT 57.291 33.333 0.00 0.00 30.31 2.45
2924 3311 6.238925 GGATTCTGATCAACATTGCATCATCA 60.239 38.462 0.00 2.20 33.77 3.07
2925 3312 6.150318 GGATTCTGATCAACATTGCATCATC 58.850 40.000 0.00 4.06 33.77 2.92
2926 3313 5.596772 TGGATTCTGATCAACATTGCATCAT 59.403 36.000 0.00 0.00 33.77 2.45
2927 3314 4.951094 TGGATTCTGATCAACATTGCATCA 59.049 37.500 0.00 6.58 33.77 3.07
2928 3315 5.298527 TCTGGATTCTGATCAACATTGCATC 59.701 40.000 0.00 0.00 33.77 3.91
2929 3316 5.198207 TCTGGATTCTGATCAACATTGCAT 58.802 37.500 0.00 0.00 33.77 3.96
2930 3317 4.591929 TCTGGATTCTGATCAACATTGCA 58.408 39.130 0.00 0.00 33.77 4.08
2931 3318 5.571784 TTCTGGATTCTGATCAACATTGC 57.428 39.130 0.00 0.00 33.77 3.56
2932 3319 6.546403 AGGATTCTGGATTCTGATCAACATTG 59.454 38.462 0.00 0.00 33.77 2.82
2933 3320 6.546403 CAGGATTCTGGATTCTGATCAACATT 59.454 38.462 0.00 0.00 43.12 2.71
2934 3321 6.062749 CAGGATTCTGGATTCTGATCAACAT 58.937 40.000 0.00 0.00 43.12 2.71
2935 3322 5.045359 ACAGGATTCTGGATTCTGATCAACA 60.045 40.000 11.34 0.00 43.12 3.33
2936 3323 5.435291 ACAGGATTCTGGATTCTGATCAAC 58.565 41.667 11.34 0.00 43.12 3.18
2937 3324 5.705397 ACAGGATTCTGGATTCTGATCAA 57.295 39.130 11.34 0.00 43.12 2.57
2938 3325 6.138967 TCTACAGGATTCTGGATTCTGATCA 58.861 40.000 11.34 0.00 43.12 2.92
2939 3326 6.662865 TCTACAGGATTCTGGATTCTGATC 57.337 41.667 11.34 0.00 43.12 2.92
2940 3327 5.011943 GCTCTACAGGATTCTGGATTCTGAT 59.988 44.000 11.34 0.00 43.12 2.90
2941 3328 4.343526 GCTCTACAGGATTCTGGATTCTGA 59.656 45.833 11.34 0.00 43.12 3.27
2942 3329 4.502950 GGCTCTACAGGATTCTGGATTCTG 60.503 50.000 5.84 2.45 45.51 3.02
2943 3330 3.645687 GGCTCTACAGGATTCTGGATTCT 59.354 47.826 5.84 0.00 44.99 2.40
2944 3331 3.389329 TGGCTCTACAGGATTCTGGATTC 59.611 47.826 5.84 0.00 44.99 2.52
2945 3332 3.387962 TGGCTCTACAGGATTCTGGATT 58.612 45.455 5.84 0.00 44.99 3.01
2946 3333 3.051940 TGGCTCTACAGGATTCTGGAT 57.948 47.619 5.84 0.00 44.99 3.41
2947 3334 2.550277 TGGCTCTACAGGATTCTGGA 57.450 50.000 5.84 0.00 44.99 3.86
2948 3335 3.054802 AGTTTGGCTCTACAGGATTCTGG 60.055 47.826 5.84 0.00 44.99 3.86
2949 3336 4.187694 GAGTTTGGCTCTACAGGATTCTG 58.812 47.826 0.00 0.00 42.37 3.02
2950 3337 3.198853 GGAGTTTGGCTCTACAGGATTCT 59.801 47.826 0.00 0.00 43.62 2.40
2951 3338 3.055094 TGGAGTTTGGCTCTACAGGATTC 60.055 47.826 0.00 0.00 43.62 2.52
2952 3339 2.912956 TGGAGTTTGGCTCTACAGGATT 59.087 45.455 0.00 0.00 43.62 3.01
2953 3340 2.551270 TGGAGTTTGGCTCTACAGGAT 58.449 47.619 0.00 0.00 43.62 3.24
2954 3341 2.024176 TGGAGTTTGGCTCTACAGGA 57.976 50.000 0.00 0.00 43.62 3.86
2955 3342 2.814336 GTTTGGAGTTTGGCTCTACAGG 59.186 50.000 0.00 0.00 43.62 4.00
2956 3343 3.499918 CAGTTTGGAGTTTGGCTCTACAG 59.500 47.826 0.00 0.00 43.62 2.74
2957 3344 3.135712 TCAGTTTGGAGTTTGGCTCTACA 59.864 43.478 0.00 0.00 43.62 2.74
2958 3345 3.740115 TCAGTTTGGAGTTTGGCTCTAC 58.260 45.455 0.00 0.00 43.62 2.59
2959 3346 3.807209 GCTCAGTTTGGAGTTTGGCTCTA 60.807 47.826 0.00 0.00 43.62 2.43
2960 3347 2.856222 CTCAGTTTGGAGTTTGGCTCT 58.144 47.619 0.00 0.00 43.62 4.09
2961 3348 1.268079 GCTCAGTTTGGAGTTTGGCTC 59.732 52.381 0.00 0.00 43.39 4.70
2962 3349 1.322442 GCTCAGTTTGGAGTTTGGCT 58.678 50.000 0.00 0.00 37.24 4.75
2963 3350 1.032014 TGCTCAGTTTGGAGTTTGGC 58.968 50.000 0.00 0.00 37.24 4.52
2964 3351 4.053295 CAATTGCTCAGTTTGGAGTTTGG 58.947 43.478 0.00 0.00 37.24 3.28
2965 3352 4.053295 CCAATTGCTCAGTTTGGAGTTTG 58.947 43.478 0.00 0.00 42.02 2.93
2966 3353 3.493176 GCCAATTGCTCAGTTTGGAGTTT 60.493 43.478 14.16 0.00 42.02 2.66
2967 3354 2.036346 GCCAATTGCTCAGTTTGGAGTT 59.964 45.455 14.16 0.00 42.02 3.01
2968 3355 1.615392 GCCAATTGCTCAGTTTGGAGT 59.385 47.619 14.16 0.00 42.02 3.85
2969 3356 1.067354 GGCCAATTGCTCAGTTTGGAG 60.067 52.381 0.00 0.00 42.02 3.86
2970 3357 0.968405 GGCCAATTGCTCAGTTTGGA 59.032 50.000 0.00 0.00 42.02 3.53
2971 3358 0.680618 TGGCCAATTGCTCAGTTTGG 59.319 50.000 0.61 8.46 42.28 3.28
2972 3359 1.342174 AGTGGCCAATTGCTCAGTTTG 59.658 47.619 7.24 0.00 40.92 2.93
2973 3360 1.342174 CAGTGGCCAATTGCTCAGTTT 59.658 47.619 7.24 0.00 40.92 2.66
2974 3361 0.963962 CAGTGGCCAATTGCTCAGTT 59.036 50.000 7.24 0.00 40.92 3.16
2975 3362 0.178981 ACAGTGGCCAATTGCTCAGT 60.179 50.000 7.24 0.00 40.92 3.41
2976 3363 0.242825 CACAGTGGCCAATTGCTCAG 59.757 55.000 7.24 0.00 40.92 3.35
2977 3364 0.178995 TCACAGTGGCCAATTGCTCA 60.179 50.000 7.24 0.00 40.92 4.26
2978 3365 1.133790 GATCACAGTGGCCAATTGCTC 59.866 52.381 7.24 5.26 40.92 4.26
2979 3366 1.180029 GATCACAGTGGCCAATTGCT 58.820 50.000 7.24 0.00 40.92 3.91
2980 3367 0.174162 GGATCACAGTGGCCAATTGC 59.826 55.000 7.24 0.00 40.16 3.56
2981 3368 1.475280 CAGGATCACAGTGGCCAATTG 59.525 52.381 7.24 12.43 0.00 2.32
2982 3369 1.843368 CAGGATCACAGTGGCCAATT 58.157 50.000 7.24 0.00 0.00 2.32
2983 3370 0.682209 GCAGGATCACAGTGGCCAAT 60.682 55.000 7.24 1.65 0.00 3.16
2984 3371 1.303561 GCAGGATCACAGTGGCCAA 60.304 57.895 7.24 0.00 0.00 4.52
2985 3372 2.226315 AGCAGGATCACAGTGGCCA 61.226 57.895 0.00 0.00 0.00 5.36
2986 3373 1.748122 CAGCAGGATCACAGTGGCC 60.748 63.158 0.00 0.00 0.00 5.36
2987 3374 2.404995 GCAGCAGGATCACAGTGGC 61.405 63.158 0.00 0.00 0.00 5.01
2988 3375 0.322277 AAGCAGCAGGATCACAGTGG 60.322 55.000 0.00 0.00 0.00 4.00
2989 3376 1.199327 CAAAGCAGCAGGATCACAGTG 59.801 52.381 0.00 0.00 0.00 3.66
2990 3377 1.531423 CAAAGCAGCAGGATCACAGT 58.469 50.000 0.00 0.00 0.00 3.55
2991 3378 0.809385 CCAAAGCAGCAGGATCACAG 59.191 55.000 0.00 0.00 0.00 3.66
2992 3379 0.401356 TCCAAAGCAGCAGGATCACA 59.599 50.000 0.00 0.00 0.00 3.58
2993 3380 1.404391 CATCCAAAGCAGCAGGATCAC 59.596 52.381 10.25 0.00 40.07 3.06
2994 3381 1.758936 CATCCAAAGCAGCAGGATCA 58.241 50.000 10.25 0.00 40.07 2.92
2995 3382 0.384669 GCATCCAAAGCAGCAGGATC 59.615 55.000 10.25 4.15 40.07 3.36
2996 3383 0.033405 AGCATCCAAAGCAGCAGGAT 60.033 50.000 7.94 7.94 42.71 3.24
2997 3384 0.679002 GAGCATCCAAAGCAGCAGGA 60.679 55.000 3.99 3.99 35.59 3.86
2998 3385 1.807886 GAGCATCCAAAGCAGCAGG 59.192 57.895 0.00 0.00 0.00 4.85
3010 3397 4.892433 AGCATATCACAACTAGGAGCATC 58.108 43.478 0.00 0.00 0.00 3.91
3011 3398 4.970860 AGCATATCACAACTAGGAGCAT 57.029 40.909 0.00 0.00 0.00 3.79
3012 3399 4.080919 ACAAGCATATCACAACTAGGAGCA 60.081 41.667 0.00 0.00 0.00 4.26
3013 3400 4.272018 CACAAGCATATCACAACTAGGAGC 59.728 45.833 0.00 0.00 0.00 4.70
3014 3401 5.423015 ACACAAGCATATCACAACTAGGAG 58.577 41.667 0.00 0.00 0.00 3.69
3015 3402 5.420725 ACACAAGCATATCACAACTAGGA 57.579 39.130 0.00 0.00 0.00 2.94
3016 3403 6.372659 AGAAACACAAGCATATCACAACTAGG 59.627 38.462 0.00 0.00 0.00 3.02
3017 3404 7.369803 AGAAACACAAGCATATCACAACTAG 57.630 36.000 0.00 0.00 0.00 2.57
3018 3405 7.661437 AGAAGAAACACAAGCATATCACAACTA 59.339 33.333 0.00 0.00 0.00 2.24
3019 3406 6.488006 AGAAGAAACACAAGCATATCACAACT 59.512 34.615 0.00 0.00 0.00 3.16
3020 3407 6.580041 CAGAAGAAACACAAGCATATCACAAC 59.420 38.462 0.00 0.00 0.00 3.32
3021 3408 6.671190 CAGAAGAAACACAAGCATATCACAA 58.329 36.000 0.00 0.00 0.00 3.33
3022 3409 5.335113 GCAGAAGAAACACAAGCATATCACA 60.335 40.000 0.00 0.00 0.00 3.58
3023 3410 5.091431 GCAGAAGAAACACAAGCATATCAC 58.909 41.667 0.00 0.00 0.00 3.06
3024 3411 5.005740 AGCAGAAGAAACACAAGCATATCA 58.994 37.500 0.00 0.00 0.00 2.15
3025 3412 5.122869 TGAGCAGAAGAAACACAAGCATATC 59.877 40.000 0.00 0.00 0.00 1.63
3026 3413 5.005740 TGAGCAGAAGAAACACAAGCATAT 58.994 37.500 0.00 0.00 0.00 1.78
3027 3414 4.214119 GTGAGCAGAAGAAACACAAGCATA 59.786 41.667 0.00 0.00 0.00 3.14
3028 3415 3.004106 GTGAGCAGAAGAAACACAAGCAT 59.996 43.478 0.00 0.00 0.00 3.79
3029 3416 2.355756 GTGAGCAGAAGAAACACAAGCA 59.644 45.455 0.00 0.00 0.00 3.91
3030 3417 2.615912 AGTGAGCAGAAGAAACACAAGC 59.384 45.455 0.00 0.00 34.47 4.01
3031 3418 3.003068 CCAGTGAGCAGAAGAAACACAAG 59.997 47.826 0.00 0.00 34.47 3.16
3032 3419 2.945008 CCAGTGAGCAGAAGAAACACAA 59.055 45.455 0.00 0.00 34.47 3.33
3033 3420 2.564771 CCAGTGAGCAGAAGAAACACA 58.435 47.619 0.00 0.00 34.47 3.72
3034 3421 1.265365 GCCAGTGAGCAGAAGAAACAC 59.735 52.381 0.00 0.00 0.00 3.32
3035 3422 1.134128 TGCCAGTGAGCAGAAGAAACA 60.134 47.619 2.57 0.00 38.00 2.83
3036 3423 1.597742 TGCCAGTGAGCAGAAGAAAC 58.402 50.000 2.57 0.00 38.00 2.78
3044 3431 2.030007 GCATAAAAACTGCCAGTGAGCA 60.030 45.455 0.00 6.20 41.46 4.26
3045 3432 2.229784 AGCATAAAAACTGCCAGTGAGC 59.770 45.455 0.00 0.00 40.56 4.26
3046 3433 3.829948 CAGCATAAAAACTGCCAGTGAG 58.170 45.455 0.00 0.00 40.56 3.51
3047 3434 3.921119 CAGCATAAAAACTGCCAGTGA 57.079 42.857 0.00 0.00 40.56 3.41
3054 3441 4.801891 AGTGTCATGCAGCATAAAAACTG 58.198 39.130 7.82 0.00 36.96 3.16
3055 3442 4.082571 GGAGTGTCATGCAGCATAAAAACT 60.083 41.667 7.82 9.85 0.00 2.66
3056 3443 4.082571 AGGAGTGTCATGCAGCATAAAAAC 60.083 41.667 7.82 4.91 0.00 2.43
3057 3444 4.081406 AGGAGTGTCATGCAGCATAAAAA 58.919 39.130 7.82 0.00 0.00 1.94
3058 3445 3.689347 AGGAGTGTCATGCAGCATAAAA 58.311 40.909 7.82 0.00 0.00 1.52
3059 3446 3.354948 AGGAGTGTCATGCAGCATAAA 57.645 42.857 7.82 0.00 0.00 1.40
3060 3447 3.452264 ACTAGGAGTGTCATGCAGCATAA 59.548 43.478 7.82 0.00 0.00 1.90
3061 3448 3.033909 ACTAGGAGTGTCATGCAGCATA 58.966 45.455 7.82 0.00 0.00 3.14
3062 3449 1.836166 ACTAGGAGTGTCATGCAGCAT 59.164 47.619 0.52 0.52 0.00 3.79
3063 3450 1.269958 ACTAGGAGTGTCATGCAGCA 58.730 50.000 0.00 0.00 0.00 4.41
3064 3451 2.275318 GAACTAGGAGTGTCATGCAGC 58.725 52.381 0.00 0.00 0.00 5.25
3065 3452 3.599730 TGAACTAGGAGTGTCATGCAG 57.400 47.619 0.00 0.00 0.00 4.41
3066 3453 3.515104 TCATGAACTAGGAGTGTCATGCA 59.485 43.478 17.61 0.00 40.03 3.96
3067 3454 4.128925 TCATGAACTAGGAGTGTCATGC 57.871 45.455 17.61 0.00 40.03 4.06
3068 3455 5.522824 CACATCATGAACTAGGAGTGTCATG 59.477 44.000 0.00 16.94 40.69 3.07
3069 3456 5.396101 CCACATCATGAACTAGGAGTGTCAT 60.396 44.000 0.00 0.00 31.17 3.06
3070 3457 4.081476 CCACATCATGAACTAGGAGTGTCA 60.081 45.833 0.00 0.00 0.00 3.58
3071 3458 4.160439 TCCACATCATGAACTAGGAGTGTC 59.840 45.833 0.00 0.00 0.00 3.67
3072 3459 4.096681 TCCACATCATGAACTAGGAGTGT 58.903 43.478 0.00 0.00 0.00 3.55
3073 3460 4.743057 TCCACATCATGAACTAGGAGTG 57.257 45.455 0.00 0.75 0.00 3.51
3074 3461 4.102210 CCATCCACATCATGAACTAGGAGT 59.898 45.833 0.00 0.00 0.00 3.85
3075 3462 4.102210 ACCATCCACATCATGAACTAGGAG 59.898 45.833 0.00 0.00 0.00 3.69
3076 3463 4.040047 ACCATCCACATCATGAACTAGGA 58.960 43.478 0.00 5.75 0.00 2.94
3077 3464 4.102210 AGACCATCCACATCATGAACTAGG 59.898 45.833 0.00 0.00 0.00 3.02
3078 3465 5.287674 AGACCATCCACATCATGAACTAG 57.712 43.478 0.00 0.00 0.00 2.57
3079 3466 7.310052 GCTATAGACCATCCACATCATGAACTA 60.310 40.741 3.21 0.00 0.00 2.24
3080 3467 5.901413 ATAGACCATCCACATCATGAACT 57.099 39.130 0.00 0.00 0.00 3.01
3081 3468 5.641209 GCTATAGACCATCCACATCATGAAC 59.359 44.000 3.21 0.00 0.00 3.18
3082 3469 5.545335 AGCTATAGACCATCCACATCATGAA 59.455 40.000 3.21 0.00 0.00 2.57
3083 3470 5.089434 AGCTATAGACCATCCACATCATGA 58.911 41.667 3.21 0.00 0.00 3.07
3084 3471 5.046807 TGAGCTATAGACCATCCACATCATG 60.047 44.000 3.21 0.00 0.00 3.07
3085 3472 5.089434 TGAGCTATAGACCATCCACATCAT 58.911 41.667 3.21 0.00 0.00 2.45
3086 3473 4.482990 TGAGCTATAGACCATCCACATCA 58.517 43.478 3.21 0.00 0.00 3.07
3087 3474 5.674052 ATGAGCTATAGACCATCCACATC 57.326 43.478 3.21 0.00 0.00 3.06
3088 3475 5.128499 GCTATGAGCTATAGACCATCCACAT 59.872 44.000 3.21 0.00 41.10 3.21
3089 3476 4.464244 GCTATGAGCTATAGACCATCCACA 59.536 45.833 3.21 0.00 41.10 4.17
3090 3477 5.004922 GCTATGAGCTATAGACCATCCAC 57.995 47.826 3.21 0.00 41.10 4.02
3104 3491 4.540359 ATCCATCTTCTGAGCTATGAGC 57.460 45.455 0.00 0.00 42.84 4.26
3105 3492 8.916062 ACATATATCCATCTTCTGAGCTATGAG 58.084 37.037 0.00 0.00 0.00 2.90
3106 3493 8.835550 ACATATATCCATCTTCTGAGCTATGA 57.164 34.615 0.00 0.00 0.00 2.15
3107 3494 8.916062 AGACATATATCCATCTTCTGAGCTATG 58.084 37.037 0.00 0.00 0.00 2.23
3110 3497 9.491406 AATAGACATATATCCATCTTCTGAGCT 57.509 33.333 0.00 0.00 0.00 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.