>input_sequence_59220
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------------------------------------------------------ATGATGATGGTGGACACGGTCAGCGC
CAGCACCTCCTTCATCGCGCGCCACCCCTTCGACCACCACCGGCCCCAC------CGGACCCTCCTCCACGTCGTCAGCT
GCCGGCCCCTGGCCACGCCCTTCGCGGGCCGCCGCCTCGTGGCCAGAAGGCAGCCGTCGCTTCCTGCGCAGCAGCGGCTC
GCGGACTGGCCCGTCAGGGCGCTCGCGGCGGTGGGGTTCACCAAGGAGGCCGTCCCGCGCAAGGAGTTCCGGGGGATCCC
AGGGGACGGCGACAACGGATTAGGGACCGACGACGACGCCCCCCCAGCGGCGGTACCGTCATGGCCGCCGCGGAACAGGG
CGGACGACCCGAGCCTGCACAACCCGCTGCTGCGCCTCGAGCGCATGGGCTGCGGCTGGGTCGGCGTCATCTTCGAGTGG
GAGGGCGTGGTGGTGGAGGACGACACGCGGCTGGAGCGGCAGGCGTGGCTGACCCTGGCCGAGGAGGAGGGCAAGTCCCC
ACCCCCGGCGTTCGTGCTGCGGCGGGTCGAGGGGATGAAGGCCGAGCACGCGGTCTCCGAGGTGCTCTGCTGGTCCAGGG
ACCCCTCGGAGCTGCGGCGCCTGGCGGCCCGCAAGGAGGAGATCCACGGCGGGTTGCGCGGCGCCGCCAGCCAGATGCGG
GACGGGTCGAGGGAGTTCATGAGCACGCTGGTCAACTACAAGATCCCCCTTGCCGTCGCCTCCACGCGGCCCCGCAAGGC
CGTCGAGGCGGCCATCGAGGCCGTCGGCGCGCGGGGCTTCTTTGACGCCGTCGTGGCCGCGGAGGACGTGTACCGGGGCA
AGCCTGACCCGGAGCTGTTCCTCTACGCCGCGCAGCTGCTGGGATTCATCCCCGAGCGCTGCGTCGTGTTCGGCAACTCC
AACTCCGCCGTGGAGGCCGCGCACGACGCCCGTATGAAGTGCGTCGCCGTCGCGAGCAAGCACCCCGTCTACGAGCTCGG
CGCCGCCGACCTTGTTGTCAAGCGCCTCGATGAGCTGTCCGTGGTTGACCTCAAGAACCTCGCCGACATCGACTCCCCCG
AGTTTGGCATGGAGCCCGAGCCGGAGATGGAGGAGGAGGAGGACGAGGCGCCACCGTCGACCGCCGTGGGAGTCGACGAT
ATATTCTTGTAG--------------------------------------------------------------------
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>chr4D_1_TraesCS4D01G006200
GGCAGAGCCCAAAGTTTTTTTGTTGCAAAGTTTTACTGTTAACGTATGGGTTGCAGACGCGGTTCTTGCCGTTC------
--------CCTTGAGTTACATTATATATTGATTGCGGAGGTGCTCTGGGCC--ATGGATTATAGCCACTCGTAGCATTTT
TAGATTTAATTATGATTATAATAATATATA----AATAATAAAGAAGAAAAGAGGTGGGCAGCCGA---CTGGTAATTCC
TGGGCCGCGGGAGGCGCCACCTCCGCCTCTCGTTCCGGCGACGTGGCGCGCATCGGGCGGGGACTCGTCTCGCCCTCCTC
CTCCACCACCACCACCACGGGAGAAACGGAGAGAGCCAATAGAAAAATCCTCTCTTTCTTTCTATCAATCAATCGCGTGG
AGGAAAAGA-GAG-AAGAAGGAACAAGGAACCCTCTCCGGTTCGTCGCCTGCT--TCCTTCC---CCAATCCTCGCCGCT
TCCCTCCCTCCGTCGCCGGGACGCCACGGTACGGTACGGTGCGC-GCCACCTCTTCCCCACCCCCCTTATCCTCTCCCCT
CCTCTCCCCCCGGAGAGGAACCGACC--------------CAACCGAATCGAATCCAGGGGAGGGGAGGGGCGGCTGTCC
ATCTATACATAGATAGATTGGTCCAAGAATCCCCAAATCGAATCCATCCTCTTTGCTTTGGTTTATTTCTTTCTTTGTTT
ATCCTTCT---------------CGTTGATTAGGAGGAGGATTAGGTGCTCTGTTTTCGTTGCCGCGGTTGGTTCCGCCG
TTGCTCTGTTTTGTTGGCTTCCTGCCATGGATTCTTCTTTACCTTTCCTGT-------------CTTCTTCCTCCCGCGG
ATTGGGTTTCTGGCTTCTGACCGGCTTCCTTCTCCTT-TTCTTCTTCTTGCAGCGTGGAATCAGCGATAAAGCGGAGGAA
TTTGGGCGCAGGAAGGATTTGGCCGGCGGGCTCCGGGATCTGGTCGTTTG-----GTCATTCTTCTTCTTGTTGATTTGA
TCGACTGGTAGGTGGGCGGATCCACAAG---------CAGCGG------CAGCCATGATGATGGTGGACACGGTCAGCGC
CAGCACCTCCTTCATCGCGCGCCACCCCTTCGACCACCACCGGCCCCAC------CGGACCCTCCTCCACGTCGTCAGCT
GCCGGCCCCTGGCCACGCCCTTCGCGGGCCGCCGCCTCGTGGCCAGAAGGCAGCCGTCGCTTCCTGCGCAGCAGCGGCTC
GCGGACTGGCCCGTCAGGGCGCTCGCGGCGGTGGGGTTCACCAAGGAGGCCGTCCCGCGCAAGGAGTTCCGGGGGATCCC
AGGGGACGGCGACAACGGATTAGGGACCGACGACGACGCCCCCCCAGCGGCGGTACCGTCATGGCCGCCGCGGAACAGGG
CGGACGACCCGAGCCTGCACAACCCGCTGCTGCGCCTCGAGCGCATGGGCTGCGGCTGGGTCGGCGTCATCTTCGAGTGG
GAGGGCGTGGTGGTGGAGGACGACACGCGGCTGGAGCGGCAGGCGTGGCTGACCCTGGCCGAGGAGGAGGGCAAGTCCCC
ACCCCCGGCGTTCGTGCTGCGGCGGGTCGAGGGGATGAAGGCCGAGCACGCGGTCTCCGAGGTGCTCTGCTGGTCCAGGG
ACCCCTCGGAGCTGCGGCGCCTGGCGGCCCGCAAGGAGGAGATCCACGGCGGGTTGCGCGGCGCCGCCAGCCAGATGCGG
GACGGGTCGAGGGAGTTCATGAGCACGCTGGTCAACTACAAGATCCCCCTTGCCGTCGCCTCCACGCGGCCCCGCAAGGC
CGTCGAGGCGGCCATCGAGGCCGTCGGCGCGCGGGGCTTCTTTGACGCCGTCGTGGCCGCGGAGGACGTGTACCGGGGCA
AGCCTGACCCGGAGCTGTTCCTCTACGCCGCGCAGCTGCTGGGATTCATCCCCGAGCGCTGCGTCGTGTTCGGCAACTCC
AACTCCGCCGTGGAGGCCGCGCACGACGCCCGTATGAAGTGCGTCGCCGTCGCGAGCAAGCACCCCGTCTACGAGCTCGG
CGCCGCCGACCTTGTTGTCAAGCGCCTCGATGAGCTGTCCGTGGTTGACCTCAAGAACCTCGCCGACATCGACTCCCCCG
AGTTTGGCATGGAGCCCGAGCCGGAGATGGAGGAGGAGGAGGACGAGGCGCCACCGTCGACCGCCGTGGGAGTCGACGAT
ATATTCTTGTAGGAG---ACCCAGGAGCTGCCGGTATGTATGTACATTTGATTTGGAATTGGCCCTTCTCCTGTTGCACA
CGTGTATGATGGATAATTTGCGGTAGCGATCAGGAAGGAAGGAAGGGCTTTATTATCTATCCTTCTAATCCGTGTTAGGT
TGTGTTATGTACATGGAATGTATCTTTAGAACTCACACAAATTGTATATATACTTGGAAAAGAAAAAAGAGGGTACTTGA
TACGTATACGTCAG---TGCATTG-CTTCCAGATGTGGAAGGTGTAATAATTATAACTCAGAAGGAACATATGTTTATTT
GCAGTGAATGG---------------------------------------------------------------------
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----------------------------------------------------------AAAAAC----------------
-----------------------------------AGAATTACATATGTTATCTGCTTGTTGCCTGCTCTGTT-CCTACT
TGGAGCAGCAAAATTGTCTTAGCTTCTTATCATCAGACGAAAACAAATCTTCCACATGTCTCTCGTGTGATGATGTATAT
G---------TATTCCTGTGTGATGATGTGCTGTTGATCAGAATTCTGTTCTTTCTTGCAAGGGTATATTATCAAGATCT
TCCACTGTTGTTTAGAGTTTTGGGGATTCAACAAAATCTTATTTATGTCTGTGTTGTATTTTTGGCAAGAATCTTGAATA
ACCACTGGATTGCATATGATACTTGTTGCCTGCTA-----TATATGTGTTCCTACCTGTAACAGCAATTGTTTTCCCCTA
ATTTATGGAACGAAAAATTCTCCCATTGCTTTGGATCTTGTGGATCGA------ATGGGTATTTATATCTGTATAATTCT
GTGTGATCCGCTGTTAGCTTCATGATGTGATGATGATGCAATGTTGATCAGAATCCAGAATCCTGTAGAGCCAAACTCCA
AACTGAGCAATTGGCCACTGTGATCCTGCTGCTTTGGATGCTCCTAGTTGTGATATGCTTGTGTTTCTTCTGCTCACTGG
CAGTTTTTATGCTGCATGACACTCCTAGTTCATGATGTGGATGGTCTATAGCTCATAGCTCAGAAGATGGATATATGTCT
ATTTAATTTGCAGAAAAA
>chr4A_23
----------------------TTGCAAAGTTTTGCTGTTGACGCATGGGTTGCAGACGCGGTTTTTTCCGGTGGAGCAA
CGGATTTTCCTTGAGTTACATTATATATTGATTGCGTAGGTGGTCTGGACGAGATGGATTATAGCCACTCGTAGCATTTT
TAGATTTAATTATAATTGTAATAATGATATAAATAATAATAAAGAAGGAAAAAGATGGTAGGAAGCCGCCGGGTAATTCC
TGGGCCGCGGGAGGCGCCACCTCCGCCTCTCGTTTGGGCGACGTGGCGCGCATCGGGCGGGGACTCGTCTCGCCTTCCTC
CTCCACCACCACCACCGGACGAGAAACAGAGAGGGCCAATAGAAAAATCCCCTCTTT---TCCATCAATCAATCGCGTGG
AGGAAAAGA-GAGGAAGAAGGAGGAAGGAACCGACGAACCACAAGCTAATCCTCTCCCCTCCGCTCCAATCCTCGCCGCC
TCCCTCGCCGGGACGCT---ACGCCACGGTACGGTACGGTGCGCCGCCTCTTCTTCCCCCTTA-----------TCCCCT
CCCCTCCTCTCGGAGAGGA----ACCGGCCCAACCCAACGCAACCGAATCGAATCCG-----GGGGAGGGGCGGCTGTTC
ATCTATAGATAGATTGATTGGT---------CCCAAATCGA---------------------------------------
ATCCTTCT---------------CGTTGATTAGGAGGAGGATTAGGTGCTCTGTTTTCGTTGCCGCGGTTGGTTCCGCCG
TTGCTCTCTTTTGTTCGCTTCCTGCCATGG-------------TTTCCTGT-------------CTTCTTCCTCCCGCGG
ATTGGGGTTCTGACTCCTGACCGGTCTCCCTC---TCCTTCTTCTTCTTGCAGCGCGGGATCAGCAATAAAGCAGAGGAA
TTTCG---------------GGCGGAGGAGCTCAGGGATCTCGTTGCTCCTTCTTCTACTTCTTCTTCTTGA----TTGA
TCGGCTGGTAGGCGCGCGGGC------CGGGCGGATCCAGCGG------CAGCCATGATGATGGTGGACACGGTCAGCGC
CAGCACCTCCTTCATCGCGCGCCACCCCTTCGACCACCACCGGCCCCGC------CGGACGCTGCTCCACGTCGTCAGCT
GCCGCCCCCTCCGCACGCCCTTCGCGGGCCGCCGTCTCGTGGCCCGGGTGCCCAGGCCGGAGCG------GCAGCGGCTC
GCGGACTGGCCCGTCAGGGCGCTGGCAGCCGTCGGGTTCACCAAGGAGGCCGTCCCGCGGAAGGAGTTCCGGGGGATCCC
CGGGGACGGCGACAACGGATTAAGGACCGACGACGACGCCCCCCCAGCGGCGACGCCGTCCTGGCCACCGCGGAACAGGG
CGGACGACCCCAGCCTGCACAACCCGCTGCTGCGTCTCGAGCGGATGGGCTGTGGCTGGGTCGGCGTCATCTTCGAGTGG
GAGGGCGTGGTGGTGGAGGACGACACGCGGTTGGAGCGGCAGGCGTGGCTGACCCTTGCCGAGGAGGAGAGCAAGTCGCC
GCCGCCCGCGTTCGTCCTCCGGCGGGTCGAGGGGATGAAGGCAGAGCACGCCGTCTCCGAGGTGCTCTGCTGGTCCCGGG
ACCCCTCTGAGCTGCGGCGCCTGGCGGCCCGCAAGGAGGAGATCCATGGCGGGCTCCGCGGCGCCGCCAGCCAGATGCGG
GACGGGTCGAGGGAGTTCATGAGCACGCTGGTCAACTACAAGATCCCCCTCGCCGTCGCCTCCACGAGGCCCCGCAAGGC
CGTGGAGGCGGCCATCGAGGCCGTCGGCGCGCGTGGGTTCTTCGACGCCGTGGTGGCGGCGGAGGACGTGTACCGGGGCA
AGCCCGACCCGGAGCTGTTCCTCTACGCCGCGCAGCTGCTGGGCTTCATCCCCGAGCGCTGCGTCGTGTTCGGCAACTCC
AACTCTGCCGTGGAGGCCGCGCACGACGCCCGCATGAAGTGCGTGGCCGTCGCAAGCAAGCACCCCGTCTACGAGCTCGG
AGCCGCCGACCTTGTTGTGAAGCGGCTCGATGAGCTCTCCATTGTTGACCTCAAGAACCTCGCCGACATCGACTCCCCTG
AGTTTGGCATGGAGCCTGAGCCGGAGATGGAGGAGGAGGAGGACGAGGCGCCACCGTCGACCGCCGTGGGTGTCGACGAT
ATATTCTTGTAGGAGGAGACTCAGGAGCCGCCGGTATGTATGTACATTTGATTTGGG-TTGGCCCTTCTCCTGCTGCACG
TGTGTATGATGGATAATTCATGATAGCGATCAGGAAGGAAGGAAGGGCTTTATTATCTATCCTTCTAATCCGTGTTAGGT
TGTGTTATGTACATGGAATGTATCTTTAGAACTCACACAAACTGTATATATACTTGGAAAAAAAATGGGTACTATATATA
CGTCGGTGCATCTGAACTGCATTACCTTCCTGGTGTGGATGGTGTAATAGCTCAGA---AGAAGGAACATATGTTTATTT
GCAGTGAATAACAGAACTACATATGCTACTTGTTCCTACTTTTGAGCAGTAATCTCGTTCGCTTTAGGTCTTTTATACGA
AACCAAAGAGTCTTGCATTGCTTTTGATTTTGAGGATCCAACGAATATCTATTCCTGCGTGATGATGTTCTGTTGATCGG
AATTCTATAAGACACACTGAACGTTAGTCTCACGGATGGTGGGTCTGTTTGCAAAAGAAAACGCAATGTATTGTTTCCTC
TTTGGTAAAATGAGAAGGTCCTTGTACTCTTTGGAAGAATTACATATGTTAACTGGTTGTTGCCTGCTCTGTTTCCTGCT
TGGAGCAGCAATTTTTTTCGC------TTTTATCTGATGGAAAGAAGTGTTCCAATTGCCTGGGATAGATTTTGTGGGTC
CAATGAGTATTATTCCTGTGTGATGATGTGCTGTTGATCAGAATTATGTTCTTACTTGCAAGGGTATATTATCAAGATCT
CCCATTGTTGTTTACAATTTTGGGGATCCACTGAAATGTTAATCATGTCTGTGGTGTATTCTTAGCTAGAATCCTGAATC
ACGAGTGAATTACACCTGTTACTGCCGCCTGCTATACTAGTATATATTTTCCTACTTGAAACAGGAATTGTTTTCCCTTA
ATTCATGGGACGAAAAGGTCTCCAATTTCTTTGTATTTTCGA-----GGAACCCACAAGTATTTGTATCTGTA--ATTTT
GTGTGAT-------------------------------------------------------------------------
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>chr4B_132
--------------------------------------------------------------------------------
-------------------------------------------------------------------CTCGTAGCATTTT
TAGATTTAATTATAAATTG-----TGATATGAATATGAATAAAGAAGAAGAAAA--GGTAGGAAGCCTCCTGGTAATTCC
TGGGCCGCGGGAGGCGCCACCTCCGCCTCACATTCGGGCGACGTGGCGCGCATCGGGCGGGGACTCGTC-----------
-TCCACCACCACCACCA------------------CCAATAGAAAAATCGA---------TCAATCAATCCATCGCGTGG
AGGAAAAGAAGAG-ACCAAGGAAGAAGGAACCGACGAAGGAAGGAGAAGCTAAGGTCCATCC---CCGATCCTCGCCGCC
TCCGTCGCCGGGACGCC---ACGGTACGATACGGTACGGTGCGT-GCCACCTCTTCT---CCCCTCTCATCCTCTACCCT
CCGCTCCTCTCGGAGAGGA----ACC--------------CGACCGAATCGAATCCAGA-----GGAGGGGCGGCTGTCC
ATCTATAGATAGATAGATTGGTGCAAGAATCCCCAAATCGAATCCATCCTCTTTCCTTTGGT----TTCTTTCTTTGTTT
GTCTGCTAGGCTGCCTGCCTCCCCGTTGATTAGGAGGAGGATTAGGTGCTCTGTTT-CGTCCCCGTGGTTGGTGT--CCG
TTGCTCTGTTTTGTTCGCTTCCTGCCATGG-------------ATTCTTCTTTGCCTTTCCTCCCTTCTTCCTCCCGCGG
ATTGGGTTTCTGAATTCTGACCGGTCTCCTTCTCATCCTTCTTCTTCTTGCAGCGTGGAATCAGCGATAAAGCGGACGAA
TTTCG---------------GGCGGAGGAGCTCAGGGATCTCGTCGTTTG-----CTCCTTCTTCTTCTTGA----TTGA
TCGACCGGTAGGTGGGCGAGGCGAAGGCGGGCGGATCCAGGAGCGGCATCAGCCATGATGATGGTGGACACGGTCAGCGC
CAGCACCTCCTTCATCGCGCGCCACCCCTCCGACCACCACCGGCCCCGCCGGCCGCGGACCCTCCTCCACGTCGTCAGCT
GCCGGCCCCTCGCCACGCCCTTCGCGGGCCGCCGCCTCGTGGCCCGGGTGCCCAGGCCGGAGCG------CCAGCGGCTC
GCGGACTGGCCCGTCAGGGCGCTGGCCGCCGTCGGGTTCACCAAGGAGGCCGTCCCGTGGAAGGAGTTCCGGGGGATCCC
AGGGGACGGCGACAACGGATTAGGGACCGACGACGCCGCACCCCCAGCGGCGGTACCGTCGTGGCCGCCGCGGAACAGGG
CGGACGACCCGAGCCTGCACAACCCGCTGCTCCGGCTGGAGCGCATGGGCTGCGGCTGGGTCGGCGTCATCTTCGAGTGG
GAGGGCGTGGTGGTGGAGGACGACACGCGGCTCGAGCGGCAGGCGTGGCTGACCCTGGCCGAGGAGGAGGGCAAGTCCCC
ACCCCCGGCTTTCGTCCTGCGGCGGGTTGAGGGGATGAAGGCGGAGCACGCGGTCTCCGAGGTGCTCTGCTGGTCCCGGG
ACCCCGCGGAGCTGCGGCGCCTGGCGGCACGCAAGGAGGAGATCCATGGCGGGCTCCGCGGCGCCGCCAGCCAGATGCGG
GATGGGTCGAGGGAGTTCATGAGCACGCTTGTCAACTACAAGATCCCCCTCGCCGTGGCCTCCACAAGGCCCCGCAAGGC
CGTCGAGGCAGCCATTGACGCCGTCGGTGCTCGGGGCTTCTTCGATGCCGTGGTCGCTGCGGAGGACGTGTACCGGGGCA
AGCCCGACCCCGAGCTGTTCCTCTACGCCGCGCAGCTGCTCGGCTTCATCCCCGAGCGCTGCGTCGTGTTCGGCAACTCC
AACTCCGCCGTGGAGGCCGCGCACGACGCCCGTATGAAGTGTGTGGCCGTCGCGAGCAAGCACCCCGTCTATGAGCTCGG
CGCAGCCGACCTGGTGGTCAAGCGGCTCGACGAGCTGTCCGTGGTTGACCTCAAGAACCTCGCCGACATCGACTCCCCCG
AGTTTGGCATGGAGCCCGAGCCGGAGATGGAGGAGGAGGAGGATGAGGCGCCACCATCGACCGCGGTGGGCGTCGACGAT
ATATTCTTGTAGGAGGAGACTCATGAGCCGCCGGTATGTATGTACATTTGATTTGGG-TTGGCCCTTCTCCTGTTGCACA
TTTGTATGATGGATAATTTGCGATAGCGATCAGGAAGGAAGGAAGGGCTT-ATTATCTATCCTTCTAATCTGTGTTAGGT
TGTGTTATGTACATGGAATGTATCTTTAGAACTCACACAAACTGTATATAT----------------------------A
CGTTGGTGCATCTGAACTGCATTG-CTTCCAGATGTGGATGGTGTAATAACTCAGA---AG--GGAACATATGTTTATTT
GCAGTGAATG----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------AAAAGAAAAAAC----------------
-----------------------------------AGAATTACATATGTTAACTGCTTGTTGCCTGCTCTGCTTCCTGCT
TGGAGCAGCAATTCTTTTTGC------TTTTATCAGACGAAAA-AAGTGTTGTAATTGCATTGGATAGATTTTGAGGGTC
CAATGGATATTATTCCTGTGTGATGATGTGCTGTTGATCATGATTATGTTCTTACTTGCATGGGTATATTATCAAGATCT
TCCACTGTTGTTTAGAATTTTGGGGATCCGTCGAAATTTTATTTATGTC-------------------GACCACTGAGTA
ACCACTGTAGTACAGGTGTTACTTGCTGCCTGCTT-------TATATGTTCCTACTTGTTACAGCAATTGTTTTCCCCTA
ATTTACGGAACGGGAAATTCTTGCATTGCTTTGGATTTTGAGGAACCGGAACCGATGAGTATTTATACCTGTA--ATTCT
GTGTGAT-------------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSS------------S-----S---S-------------------S--S---S-S------
------------------------------------S-----S-----S-S-----------------------------
-------------S---S-------SSSSS---------------------S--S---SSS-SS-S--------------
-----------------------------------S--------------------------------------S-----
-----------------SSS-------S-----S----------------S------SSS--S-----------------
-----------------------S--------SS-SSS--SSS-S-SSS-S-------S--------------------S
------S-SSS-S----SSS---------------------------------------S----S--S------------
--S----S-S---------SSSS-----------------------------------SSSS------------------
-------S--------------S-------------------------------S-------SSSS--------------
--------------------------------------------------------------------------------
---------------S--------------SSSSSSSSSSSSS-------------------------------------
------------S-----------SS--------S-S-------------------------------------------
---S-SSSSSSSSSSSSSSS---S-SS-S----S-------S-------------S--S------------SSSSS----
-------------------SS-S-SSSS----------------------------------------------------
-----------------------------------------------S--------------------------------
----------S---------------------------------S-SSS--SSSS-S--SSS-SSSSSSS----------
-----------------------S--S--S--S--------------------------S--------------------
------------------------------------------------------------S-------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
---------------S--------------------------S---------------------------------S---
----------------------------------------------S------S-S------------------------
--------------------------------------------------S---------------S-------------
------------------------------------------S--------S-----S----------------------
----S--------------------------------------S------------------------------------
--------------------------------------------S-----------------------------------
------------------------S-------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------S-------S---------------------------SS----------------------
S---------------------S---------------------------------------------------------
-----------------------------------------S-------------------S---SSS-SSSSSSS-SS-
SSSSSS-S-S--S--------------------------S----------S-SSS-SSS---------------------
----------S---------------------------------------------------------------------
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---------------------------------------------------S-------------------------S--
-----------SS--S-S-SSSSSSSS-S-S------------S--S-S-----SS--S--SSSS-SSSS-SSSSSSSSS
S--------------------------------------------S-------S--------------------------
----------------S----------S--S-S----S---------------S------S--S--S------S------
-------S---S--SS--S------S--------S----------S---------S------------------------
------------------------------------S---S---S-SS---------S---------------SS-----
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_648
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--------------------------------------------------------------------GGGCGGCTGTCC
ATCTATAC------------------------------------------------------------------------
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>reverse_2488
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-------ACGTCAGTGCATTGCTTCCA-----------------------------------------------------
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