Multiple sequence alignment - TraesCS4B01G319800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G319800 chr4B 100.000 2720 0 0 1 2720 610561208 610563927 0.000000e+00 5024
1 TraesCS4B01G319800 chr4B 100.000 88 0 0 2946 3033 610564153 610564240 2.420000e-36 163
2 TraesCS4B01G319800 chr4B 94.624 93 4 1 2549 2641 52568510 52568601 3.150000e-30 143
3 TraesCS4B01G319800 chr4B 84.138 145 14 7 1674 1815 610562830 610562968 6.820000e-27 132
4 TraesCS4B01G319800 chr4D 87.686 2355 129 61 1 2251 481546512 481548809 0.000000e+00 2593
5 TraesCS4B01G319800 chr4D 94.624 93 4 1 2549 2641 22555098 22555189 3.150000e-30 143
6 TraesCS4B01G319800 chr4D 96.154 78 3 0 2956 3033 481548883 481548960 8.830000e-26 128
7 TraesCS4B01G319800 chr4D 82.759 145 16 7 1674 1815 481548174 481548312 1.480000e-23 121
8 TraesCS4B01G319800 chr5A 91.281 1124 43 24 1187 2262 661149379 661148263 0.000000e+00 1482
9 TraesCS4B01G319800 chr5A 84.591 636 45 20 473 1079 661150095 661149484 1.570000e-162 582
10 TraesCS4B01G319800 chr5A 83.168 404 33 11 25 411 661150487 661150102 1.350000e-88 337
11 TraesCS4B01G319800 chr5A 83.784 148 9 9 1677 1815 661148910 661148769 3.170000e-25 126
12 TraesCS4B01G319800 chr1B 95.638 298 13 0 2259 2556 520830764 520830467 2.120000e-131 479
13 TraesCS4B01G319800 chr1B 95.745 94 3 1 2549 2642 520830770 520830862 1.880000e-32 150
14 TraesCS4B01G319800 chr6B 95.254 295 14 0 2259 2553 113785862 113786156 4.580000e-128 468
15 TraesCS4B01G319800 chr6B 95.960 99 3 1 2549 2647 113785856 113785759 3.130000e-35 159
16 TraesCS4B01G319800 chr5B 94.667 300 15 1 2259 2558 466967517 466967219 5.920000e-127 464
17 TraesCS4B01G319800 chr5B 91.667 300 25 0 2259 2558 555211738 555211439 1.680000e-112 416
18 TraesCS4B01G319800 chr5B 94.737 95 3 2 2549 2642 466967523 466967616 2.440000e-31 147
19 TraesCS4B01G319800 chr5B 95.402 87 3 1 2553 2639 555211747 555211832 1.470000e-28 137
20 TraesCS4B01G319800 chr5D 93.333 300 20 0 2259 2558 10502979 10502680 7.720000e-121 444
21 TraesCS4B01G319800 chr5D 91.000 300 27 0 2259 2558 97250080 97250379 3.640000e-109 405
22 TraesCS4B01G319800 chr5D 96.809 94 2 1 2549 2642 10502985 10503077 4.050000e-34 156
23 TraesCS4B01G319800 chr2B 90.333 300 29 0 2259 2558 542250704 542251003 7.880000e-106 394
24 TraesCS4B01G319800 chr2B 88.333 300 35 0 2259 2558 542236132 542236431 7.990000e-96 361
25 TraesCS4B01G319800 chr2B 94.624 93 4 1 2549 2641 542236126 542236035 3.150000e-30 143
26 TraesCS4B01G319800 chr2B 94.624 93 4 1 2549 2641 542250698 542250607 3.150000e-30 143
27 TraesCS4B01G319800 chr2A 90.333 300 29 0 2259 2558 84188845 84188546 7.880000e-106 394


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G319800 chr4B 610561208 610564240 3032 False 1773.000000 5024 94.712667 1 3033 3 chr4B.!!$F2 3032
1 TraesCS4B01G319800 chr4D 481546512 481548960 2448 False 947.333333 2593 88.866333 1 3033 3 chr4D.!!$F2 3032
2 TraesCS4B01G319800 chr5A 661148263 661150487 2224 True 631.750000 1482 85.706000 25 2262 4 chr5A.!!$R1 2237

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
197 221 0.179108 AGATAAAGCGAGCGTGACCC 60.179 55.0 0.00 0.0 0.0 4.46 F
345 377 0.317269 CAGCGGCAACACAAACAGAG 60.317 55.0 1.45 0.0 0.0 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1170 1307 0.24636 CAGGCAGTGTATGACCGACA 59.754 55.0 0.0 0.0 37.86 4.35 R
2268 2456 0.03582 GCACCCTGGATGTAACCGAA 60.036 55.0 0.0 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.327244 CCGACCGAGCGTACTAGC 59.673 66.667 0.00 0.00 37.41 3.42
138 160 4.657824 CAGACACGAACCGGCGGT 62.658 66.667 28.83 28.83 37.65 5.68
174 198 1.437986 CCGGGAATCGACCTCTCAC 59.562 63.158 0.00 0.00 42.43 3.51
176 200 1.374343 CGGGAATCGACCTCTCACGA 61.374 60.000 4.74 0.00 42.43 4.35
177 201 0.815734 GGGAATCGACCTCTCACGAA 59.184 55.000 0.00 0.00 41.65 3.85
197 221 0.179108 AGATAAAGCGAGCGTGACCC 60.179 55.000 0.00 0.00 0.00 4.46
225 249 4.927782 GGTCACGCACAGCCCACA 62.928 66.667 0.00 0.00 0.00 4.17
339 371 3.286751 GAGGCAGCGGCAACACAA 61.287 61.111 11.88 0.00 43.71 3.33
340 372 2.832661 AGGCAGCGGCAACACAAA 60.833 55.556 11.88 0.00 43.71 2.83
344 376 1.726865 CAGCGGCAACACAAACAGA 59.273 52.632 1.45 0.00 0.00 3.41
345 377 0.317269 CAGCGGCAACACAAACAGAG 60.317 55.000 1.45 0.00 0.00 3.35
346 378 1.008538 GCGGCAACACAAACAGAGG 60.009 57.895 0.00 0.00 0.00 3.69
347 379 1.444119 GCGGCAACACAAACAGAGGA 61.444 55.000 0.00 0.00 0.00 3.71
348 380 0.588252 CGGCAACACAAACAGAGGAG 59.412 55.000 0.00 0.00 0.00 3.69
349 381 0.954452 GGCAACACAAACAGAGGAGG 59.046 55.000 0.00 0.00 0.00 4.30
352 384 2.498167 CAACACAAACAGAGGAGGAGG 58.502 52.381 0.00 0.00 0.00 4.30
353 385 2.103153 ACACAAACAGAGGAGGAGGA 57.897 50.000 0.00 0.00 0.00 3.71
354 386 2.625639 ACACAAACAGAGGAGGAGGAT 58.374 47.619 0.00 0.00 0.00 3.24
356 392 1.912043 ACAAACAGAGGAGGAGGATGG 59.088 52.381 0.00 0.00 0.00 3.51
365 401 4.996434 GGAGGATGGGCGCGATGG 62.996 72.222 12.10 0.00 0.00 3.51
385 421 2.203806 GGGAGAAACCGGAGAGGAG 58.796 63.158 9.46 0.00 45.00 3.69
388 424 0.458260 GAGAAACCGGAGAGGAGCTC 59.542 60.000 9.46 4.71 45.00 4.09
512 564 0.597377 CTGTACTGTGCGCACTGTGA 60.597 55.000 44.13 33.32 42.27 3.58
624 682 6.150307 ACATCCACGTCAGACAGATATAGATC 59.850 42.308 0.41 0.00 0.00 2.75
629 687 7.225734 CCACGTCAGACAGATATAGATCGATAT 59.774 40.741 7.94 7.94 37.15 1.63
635 693 9.435688 CAGACAGATATAGATCGATATAGAGGG 57.564 40.741 8.17 0.00 37.15 4.30
636 694 8.100791 AGACAGATATAGATCGATATAGAGGGC 58.899 40.741 8.17 0.00 37.15 5.19
637 695 7.750655 ACAGATATAGATCGATATAGAGGGCA 58.249 38.462 8.17 0.00 37.15 5.36
638 696 7.663905 ACAGATATAGATCGATATAGAGGGCAC 59.336 40.741 8.17 0.00 37.15 5.01
689 751 1.432270 GCTAGCTAGCCACCAAAGCG 61.432 60.000 31.67 0.00 43.39 4.68
786 852 3.075283 TCACCAATTCCCTTTGCCTCTTA 59.925 43.478 0.00 0.00 0.00 2.10
795 861 2.762327 CCTTTGCCTCTTATGTGCCATT 59.238 45.455 0.00 0.00 0.00 3.16
825 891 1.080705 GTGACACGCTCGCCTAACT 60.081 57.895 0.00 0.00 0.00 2.24
826 892 1.071567 GTGACACGCTCGCCTAACTC 61.072 60.000 0.00 0.00 0.00 3.01
833 899 4.124351 TCGCCTAACTCCCGCACG 62.124 66.667 0.00 0.00 0.00 5.34
835 901 4.752879 GCCTAACTCCCGCACGCA 62.753 66.667 0.00 0.00 0.00 5.24
836 902 2.813908 CCTAACTCCCGCACGCAC 60.814 66.667 0.00 0.00 0.00 5.34
897 987 1.149101 ATTCCCACACACCCTCACTT 58.851 50.000 0.00 0.00 0.00 3.16
898 988 1.809133 TTCCCACACACCCTCACTTA 58.191 50.000 0.00 0.00 0.00 2.24
899 989 1.348064 TCCCACACACCCTCACTTAG 58.652 55.000 0.00 0.00 0.00 2.18
906 996 1.827969 ACACCCTCACTTAGCTAGCTG 59.172 52.381 27.68 13.96 0.00 4.24
930 1020 2.158608 CCCATTATTCTCACCTGTCCCC 60.159 54.545 0.00 0.00 0.00 4.81
931 1021 2.509548 CCATTATTCTCACCTGTCCCCA 59.490 50.000 0.00 0.00 0.00 4.96
934 1024 4.946160 TTATTCTCACCTGTCCCCATTT 57.054 40.909 0.00 0.00 0.00 2.32
935 1025 2.584835 TTCTCACCTGTCCCCATTTG 57.415 50.000 0.00 0.00 0.00 2.32
936 1026 1.741028 TCTCACCTGTCCCCATTTGA 58.259 50.000 0.00 0.00 0.00 2.69
937 1027 2.278245 TCTCACCTGTCCCCATTTGAT 58.722 47.619 0.00 0.00 0.00 2.57
938 1028 2.239654 TCTCACCTGTCCCCATTTGATC 59.760 50.000 0.00 0.00 0.00 2.92
939 1029 1.284785 TCACCTGTCCCCATTTGATCC 59.715 52.381 0.00 0.00 0.00 3.36
952 1042 5.061853 CCATTTGATCCATCTTCTGATCGT 58.938 41.667 0.00 0.00 40.19 3.73
963 1053 1.158484 TCTGATCGTCTACCCGCTCG 61.158 60.000 0.00 0.00 0.00 5.03
972 1062 1.668101 CTACCCGCTCGCCTTCTCTT 61.668 60.000 0.00 0.00 0.00 2.85
973 1063 1.255667 TACCCGCTCGCCTTCTCTTT 61.256 55.000 0.00 0.00 0.00 2.52
974 1064 1.811679 CCCGCTCGCCTTCTCTTTC 60.812 63.158 0.00 0.00 0.00 2.62
975 1065 1.811679 CCGCTCGCCTTCTCTTTCC 60.812 63.158 0.00 0.00 0.00 3.13
1034 1137 2.802816 TGAGCAAGAAACGCTTCTTCTC 59.197 45.455 21.26 21.26 46.88 2.87
1085 1200 3.434641 CGATCCTGATTCCATACATGCAC 59.565 47.826 0.00 0.00 0.00 4.57
1087 1202 1.265095 CCTGATTCCATACATGCACGC 59.735 52.381 0.00 0.00 0.00 5.34
1096 1211 0.798159 TACATGCACGCTCTTTGCTG 59.202 50.000 0.00 0.00 40.86 4.41
1119 1252 3.117512 GGGGGATCTTGCTTTAGAATCCA 60.118 47.826 0.00 0.00 0.00 3.41
1170 1307 1.392589 CACCTGCACTTTGTTCTGGT 58.607 50.000 0.00 0.00 32.36 4.00
1183 1320 2.288579 TGTTCTGGTGTCGGTCATACAC 60.289 50.000 0.00 0.00 45.21 2.90
1243 1391 0.796312 CTAACGATGCTGGCGTGTTT 59.204 50.000 0.00 0.00 41.75 2.83
1325 1473 1.519455 CATGAAGGCCGTCTCCGTC 60.519 63.158 19.81 0.05 35.56 4.79
1359 1507 2.740055 CCGCAACGCTCTGCTCTT 60.740 61.111 5.49 0.00 40.33 2.85
1383 1552 7.423844 TTTCTGTTCTGCTAGATCCATTAGA 57.576 36.000 0.00 0.00 0.00 2.10
1416 1585 0.596082 TCGAATGACTGACTGACGCA 59.404 50.000 0.00 0.00 0.00 5.24
1442 1611 1.207570 CTCTGCTCTGCTCTGTTCCAT 59.792 52.381 0.00 0.00 0.00 3.41
1444 1613 0.675837 TGCTCTGCTCTGTTCCATGC 60.676 55.000 0.00 0.00 0.00 4.06
1452 1621 2.414161 GCTCTGTTCCATGCCGTTTTAC 60.414 50.000 0.00 0.00 0.00 2.01
1468 1637 0.464036 TTACTTCGCCAGGCATCGAT 59.536 50.000 13.30 0.00 34.48 3.59
1639 1808 1.616628 GGAGGCCAAGAAGGAGGGA 60.617 63.158 5.01 0.00 41.22 4.20
1641 1810 0.618968 GAGGCCAAGAAGGAGGGAGA 60.619 60.000 5.01 0.00 41.22 3.71
1644 1813 1.901085 CCAAGAAGGAGGGAGACGG 59.099 63.158 0.00 0.00 41.22 4.79
1645 1814 1.617947 CCAAGAAGGAGGGAGACGGG 61.618 65.000 0.00 0.00 41.22 5.28
1705 1877 2.184579 GGCGACGGGAAGAAGGAG 59.815 66.667 0.00 0.00 0.00 3.69
1744 1919 1.545706 GCGACAAGAAGGAGGAGGGT 61.546 60.000 0.00 0.00 0.00 4.34
1801 1976 0.618968 ACAAGAAGGAGGAGGGCGAT 60.619 55.000 0.00 0.00 0.00 4.58
1899 2074 4.230002 GCCGCCGCCCTACATGTA 62.230 66.667 5.25 5.25 0.00 2.29
1906 2081 1.748647 CGCCCTACATGTACAACGCG 61.749 60.000 3.53 3.53 0.00 6.01
2251 2439 1.717032 CCTGCCTGCCCTAGTACATA 58.283 55.000 0.00 0.00 0.00 2.29
2252 2440 1.344763 CCTGCCTGCCCTAGTACATAC 59.655 57.143 0.00 0.00 0.00 2.39
2253 2441 1.344763 CTGCCTGCCCTAGTACATACC 59.655 57.143 0.00 0.00 0.00 2.73
2254 2442 1.343580 TGCCTGCCCTAGTACATACCA 60.344 52.381 0.00 0.00 0.00 3.25
2255 2443 1.070289 GCCTGCCCTAGTACATACCAC 59.930 57.143 0.00 0.00 0.00 4.16
2256 2444 2.394632 CCTGCCCTAGTACATACCACA 58.605 52.381 0.00 0.00 0.00 4.17
2257 2445 2.365617 CCTGCCCTAGTACATACCACAG 59.634 54.545 0.00 0.00 0.00 3.66
2258 2446 1.760613 TGCCCTAGTACATACCACAGC 59.239 52.381 0.00 0.00 0.00 4.40
2259 2447 1.070289 GCCCTAGTACATACCACAGCC 59.930 57.143 0.00 0.00 0.00 4.85
2260 2448 2.394632 CCCTAGTACATACCACAGCCA 58.605 52.381 0.00 0.00 0.00 4.75
2261 2449 2.102588 CCCTAGTACATACCACAGCCAC 59.897 54.545 0.00 0.00 0.00 5.01
2262 2450 2.102588 CCTAGTACATACCACAGCCACC 59.897 54.545 0.00 0.00 0.00 4.61
2263 2451 0.909623 AGTACATACCACAGCCACCC 59.090 55.000 0.00 0.00 0.00 4.61
2264 2452 0.616371 GTACATACCACAGCCACCCA 59.384 55.000 0.00 0.00 0.00 4.51
2265 2453 1.003812 GTACATACCACAGCCACCCAA 59.996 52.381 0.00 0.00 0.00 4.12
2266 2454 0.251165 ACATACCACAGCCACCCAAC 60.251 55.000 0.00 0.00 0.00 3.77
2267 2455 0.251121 CATACCACAGCCACCCAACA 60.251 55.000 0.00 0.00 0.00 3.33
2268 2456 0.704076 ATACCACAGCCACCCAACAT 59.296 50.000 0.00 0.00 0.00 2.71
2269 2457 0.480690 TACCACAGCCACCCAACATT 59.519 50.000 0.00 0.00 0.00 2.71
2270 2458 0.827507 ACCACAGCCACCCAACATTC 60.828 55.000 0.00 0.00 0.00 2.67
2271 2459 1.580942 CACAGCCACCCAACATTCG 59.419 57.895 0.00 0.00 0.00 3.34
2272 2460 1.603455 ACAGCCACCCAACATTCGG 60.603 57.895 0.00 0.00 0.00 4.30
2273 2461 1.603455 CAGCCACCCAACATTCGGT 60.603 57.895 0.00 0.00 0.00 4.69
2274 2462 1.152830 AGCCACCCAACATTCGGTT 59.847 52.632 0.00 0.00 41.47 4.44
2275 2463 0.402504 AGCCACCCAACATTCGGTTA 59.597 50.000 0.00 0.00 37.72 2.85
2276 2464 0.524414 GCCACCCAACATTCGGTTAC 59.476 55.000 0.00 0.00 37.72 2.50
2277 2465 1.898902 CCACCCAACATTCGGTTACA 58.101 50.000 0.00 0.00 37.72 2.41
2278 2466 2.442413 CCACCCAACATTCGGTTACAT 58.558 47.619 0.00 0.00 37.72 2.29
2279 2467 2.422127 CCACCCAACATTCGGTTACATC 59.578 50.000 0.00 0.00 37.72 3.06
2280 2468 2.422127 CACCCAACATTCGGTTACATCC 59.578 50.000 0.00 0.00 37.72 3.51
2281 2469 2.040545 ACCCAACATTCGGTTACATCCA 59.959 45.455 0.00 0.00 37.72 3.41
2282 2470 2.682856 CCCAACATTCGGTTACATCCAG 59.317 50.000 0.00 0.00 37.72 3.86
2283 2471 2.682856 CCAACATTCGGTTACATCCAGG 59.317 50.000 0.00 0.00 37.72 4.45
2284 2472 2.682856 CAACATTCGGTTACATCCAGGG 59.317 50.000 0.00 0.00 37.72 4.45
2285 2473 1.913419 ACATTCGGTTACATCCAGGGT 59.087 47.619 0.00 0.00 0.00 4.34
2286 2474 2.288666 CATTCGGTTACATCCAGGGTG 58.711 52.381 0.00 0.00 0.00 4.61
2287 2475 0.035820 TTCGGTTACATCCAGGGTGC 60.036 55.000 0.00 0.00 0.00 5.01
2288 2476 0.907704 TCGGTTACATCCAGGGTGCT 60.908 55.000 0.00 0.00 0.00 4.40
2289 2477 0.828022 CGGTTACATCCAGGGTGCTA 59.172 55.000 0.00 0.00 0.00 3.49
2290 2478 1.202533 CGGTTACATCCAGGGTGCTAG 60.203 57.143 0.00 0.00 0.00 3.42
2291 2479 1.475213 GGTTACATCCAGGGTGCTAGC 60.475 57.143 8.10 8.10 0.00 3.42
2292 2480 1.486726 GTTACATCCAGGGTGCTAGCT 59.513 52.381 17.23 0.00 0.00 3.32
2293 2481 1.879575 TACATCCAGGGTGCTAGCTT 58.120 50.000 17.23 0.00 0.00 3.74
2294 2482 0.254178 ACATCCAGGGTGCTAGCTTG 59.746 55.000 17.23 8.93 0.00 4.01
2295 2483 0.254178 CATCCAGGGTGCTAGCTTGT 59.746 55.000 17.23 0.00 0.00 3.16
2296 2484 0.995024 ATCCAGGGTGCTAGCTTGTT 59.005 50.000 17.23 0.00 0.00 2.83
2297 2485 0.771127 TCCAGGGTGCTAGCTTGTTT 59.229 50.000 17.23 0.00 0.00 2.83
2298 2486 1.982226 TCCAGGGTGCTAGCTTGTTTA 59.018 47.619 17.23 0.00 0.00 2.01
2299 2487 2.027192 TCCAGGGTGCTAGCTTGTTTAG 60.027 50.000 17.23 0.00 0.00 1.85
2323 2511 5.046910 ACAAATGTGAGCCGAAACATTAG 57.953 39.130 1.78 0.00 44.24 1.73
2324 2512 3.764885 AATGTGAGCCGAAACATTAGC 57.235 42.857 0.00 0.00 43.43 3.09
2325 2513 2.472695 TGTGAGCCGAAACATTAGCT 57.527 45.000 0.00 0.00 38.56 3.32
2326 2514 2.076100 TGTGAGCCGAAACATTAGCTG 58.924 47.619 0.00 0.00 35.23 4.24
2327 2515 2.289382 TGTGAGCCGAAACATTAGCTGA 60.289 45.455 0.00 0.00 35.23 4.26
2328 2516 2.939103 GTGAGCCGAAACATTAGCTGAT 59.061 45.455 0.00 0.00 35.23 2.90
2329 2517 3.001736 GTGAGCCGAAACATTAGCTGATC 59.998 47.826 0.00 0.00 35.23 2.92
2330 2518 3.118629 TGAGCCGAAACATTAGCTGATCT 60.119 43.478 0.00 0.00 35.23 2.75
2331 2519 3.462021 AGCCGAAACATTAGCTGATCTC 58.538 45.455 0.00 0.00 33.41 2.75
2332 2520 2.545946 GCCGAAACATTAGCTGATCTCC 59.454 50.000 0.00 0.00 0.00 3.71
2333 2521 3.134458 CCGAAACATTAGCTGATCTCCC 58.866 50.000 0.00 0.00 0.00 4.30
2334 2522 3.181461 CCGAAACATTAGCTGATCTCCCT 60.181 47.826 0.00 0.00 0.00 4.20
2335 2523 4.039245 CCGAAACATTAGCTGATCTCCCTA 59.961 45.833 0.00 0.00 0.00 3.53
2336 2524 4.985409 CGAAACATTAGCTGATCTCCCTAC 59.015 45.833 0.00 0.00 0.00 3.18
2337 2525 5.451937 CGAAACATTAGCTGATCTCCCTACA 60.452 44.000 0.00 0.00 0.00 2.74
2338 2526 6.506538 AAACATTAGCTGATCTCCCTACAT 57.493 37.500 0.00 0.00 0.00 2.29
2339 2527 5.480642 ACATTAGCTGATCTCCCTACATG 57.519 43.478 0.00 0.00 0.00 3.21
2340 2528 4.252073 CATTAGCTGATCTCCCTACATGC 58.748 47.826 0.00 0.00 0.00 4.06
2341 2529 2.100128 AGCTGATCTCCCTACATGCT 57.900 50.000 0.00 0.00 0.00 3.79
2342 2530 3.251016 AGCTGATCTCCCTACATGCTA 57.749 47.619 0.00 0.00 0.00 3.49
2343 2531 3.581101 AGCTGATCTCCCTACATGCTAA 58.419 45.455 0.00 0.00 0.00 3.09
2344 2532 3.969976 AGCTGATCTCCCTACATGCTAAA 59.030 43.478 0.00 0.00 0.00 1.85
2345 2533 4.061596 GCTGATCTCCCTACATGCTAAAC 58.938 47.826 0.00 0.00 0.00 2.01
2346 2534 4.202305 GCTGATCTCCCTACATGCTAAACT 60.202 45.833 0.00 0.00 0.00 2.66
2347 2535 5.011125 GCTGATCTCCCTACATGCTAAACTA 59.989 44.000 0.00 0.00 0.00 2.24
2348 2536 6.406692 TGATCTCCCTACATGCTAAACTAC 57.593 41.667 0.00 0.00 0.00 2.73
2349 2537 5.897250 TGATCTCCCTACATGCTAAACTACA 59.103 40.000 0.00 0.00 0.00 2.74
2350 2538 6.382859 TGATCTCCCTACATGCTAAACTACAA 59.617 38.462 0.00 0.00 0.00 2.41
2351 2539 6.614694 TCTCCCTACATGCTAAACTACAAA 57.385 37.500 0.00 0.00 0.00 2.83
2352 2540 7.011499 TCTCCCTACATGCTAAACTACAAAA 57.989 36.000 0.00 0.00 0.00 2.44
2353 2541 7.103641 TCTCCCTACATGCTAAACTACAAAAG 58.896 38.462 0.00 0.00 0.00 2.27
2354 2542 7.011499 TCCCTACATGCTAAACTACAAAAGA 57.989 36.000 0.00 0.00 0.00 2.52
2355 2543 6.877322 TCCCTACATGCTAAACTACAAAAGAC 59.123 38.462 0.00 0.00 0.00 3.01
2356 2544 6.879458 CCCTACATGCTAAACTACAAAAGACT 59.121 38.462 0.00 0.00 0.00 3.24
2357 2545 7.148407 CCCTACATGCTAAACTACAAAAGACTG 60.148 40.741 0.00 0.00 0.00 3.51
2358 2546 7.602644 CCTACATGCTAAACTACAAAAGACTGA 59.397 37.037 0.00 0.00 0.00 3.41
2359 2547 7.801716 ACATGCTAAACTACAAAAGACTGAA 57.198 32.000 0.00 0.00 0.00 3.02
2360 2548 8.220755 ACATGCTAAACTACAAAAGACTGAAA 57.779 30.769 0.00 0.00 0.00 2.69
2361 2549 8.682710 ACATGCTAAACTACAAAAGACTGAAAA 58.317 29.630 0.00 0.00 0.00 2.29
2362 2550 9.683069 CATGCTAAACTACAAAAGACTGAAAAT 57.317 29.630 0.00 0.00 0.00 1.82
2373 2561 8.981647 ACAAAAGACTGAAAATAAATGACATGC 58.018 29.630 0.00 0.00 0.00 4.06
2374 2562 9.199982 CAAAAGACTGAAAATAAATGACATGCT 57.800 29.630 0.00 0.00 0.00 3.79
2375 2563 8.976986 AAAGACTGAAAATAAATGACATGCTC 57.023 30.769 0.00 0.00 0.00 4.26
2376 2564 7.093322 AGACTGAAAATAAATGACATGCTCC 57.907 36.000 0.00 0.00 0.00 4.70
2377 2565 6.096001 AGACTGAAAATAAATGACATGCTCCC 59.904 38.462 0.00 0.00 0.00 4.30
2378 2566 5.954150 ACTGAAAATAAATGACATGCTCCCT 59.046 36.000 0.00 0.00 0.00 4.20
2379 2567 7.118723 ACTGAAAATAAATGACATGCTCCCTA 58.881 34.615 0.00 0.00 0.00 3.53
2380 2568 7.615365 ACTGAAAATAAATGACATGCTCCCTAA 59.385 33.333 0.00 0.00 0.00 2.69
2381 2569 8.537728 TGAAAATAAATGACATGCTCCCTAAT 57.462 30.769 0.00 0.00 0.00 1.73
2382 2570 8.632679 TGAAAATAAATGACATGCTCCCTAATC 58.367 33.333 0.00 0.00 0.00 1.75
2383 2571 8.773033 AAAATAAATGACATGCTCCCTAATCT 57.227 30.769 0.00 0.00 0.00 2.40
2384 2572 7.992754 AATAAATGACATGCTCCCTAATCTC 57.007 36.000 0.00 0.00 0.00 2.75
2385 2573 3.674528 ATGACATGCTCCCTAATCTCG 57.325 47.619 0.00 0.00 0.00 4.04
2386 2574 1.688735 TGACATGCTCCCTAATCTCGG 59.311 52.381 0.00 0.00 0.00 4.63
2387 2575 0.394565 ACATGCTCCCTAATCTCGGC 59.605 55.000 0.00 0.00 0.00 5.54
2388 2576 0.321122 CATGCTCCCTAATCTCGGCC 60.321 60.000 0.00 0.00 0.00 6.13
2389 2577 0.764369 ATGCTCCCTAATCTCGGCCA 60.764 55.000 2.24 0.00 0.00 5.36
2390 2578 0.980754 TGCTCCCTAATCTCGGCCAA 60.981 55.000 2.24 0.00 0.00 4.52
2391 2579 0.250081 GCTCCCTAATCTCGGCCAAG 60.250 60.000 2.24 0.00 0.00 3.61
2392 2580 1.414158 CTCCCTAATCTCGGCCAAGA 58.586 55.000 2.24 0.00 0.00 3.02
2393 2581 1.974236 CTCCCTAATCTCGGCCAAGAT 59.026 52.381 0.00 0.00 37.61 2.40
2394 2582 3.165875 CTCCCTAATCTCGGCCAAGATA 58.834 50.000 6.62 0.00 34.90 1.98
2395 2583 3.165875 TCCCTAATCTCGGCCAAGATAG 58.834 50.000 6.62 5.07 34.90 2.08
2396 2584 3.165875 CCCTAATCTCGGCCAAGATAGA 58.834 50.000 6.62 0.00 34.90 1.98
2397 2585 3.056465 CCCTAATCTCGGCCAAGATAGAC 60.056 52.174 6.62 0.00 34.90 2.59
2398 2586 2.802787 AATCTCGGCCAAGATAGACG 57.197 50.000 6.62 0.00 34.90 4.18
2399 2587 0.315568 ATCTCGGCCAAGATAGACGC 59.684 55.000 3.73 0.00 34.21 5.19
2400 2588 1.300233 CTCGGCCAAGATAGACGCC 60.300 63.158 2.24 0.00 38.07 5.68
2401 2589 2.016393 CTCGGCCAAGATAGACGCCA 62.016 60.000 2.24 0.00 41.71 5.69
2402 2590 1.883084 CGGCCAAGATAGACGCCAC 60.883 63.158 2.24 0.00 41.71 5.01
2403 2591 1.220749 GGCCAAGATAGACGCCACA 59.779 57.895 0.00 0.00 41.25 4.17
2404 2592 1.090052 GGCCAAGATAGACGCCACAC 61.090 60.000 0.00 0.00 41.25 3.82
2405 2593 1.090052 GCCAAGATAGACGCCACACC 61.090 60.000 0.00 0.00 0.00 4.16
2406 2594 0.462047 CCAAGATAGACGCCACACCC 60.462 60.000 0.00 0.00 0.00 4.61
2407 2595 0.806102 CAAGATAGACGCCACACCCG 60.806 60.000 0.00 0.00 0.00 5.28
2408 2596 2.573609 AAGATAGACGCCACACCCGC 62.574 60.000 0.00 0.00 0.00 6.13
2409 2597 3.365291 GATAGACGCCACACCCGCA 62.365 63.158 0.00 0.00 0.00 5.69
2410 2598 3.659089 ATAGACGCCACACCCGCAC 62.659 63.158 0.00 0.00 0.00 5.34
2416 2604 2.668212 CCACACCCGCACGAACAT 60.668 61.111 0.00 0.00 0.00 2.71
2417 2605 2.258013 CCACACCCGCACGAACATT 61.258 57.895 0.00 0.00 0.00 2.71
2418 2606 1.082169 CACACCCGCACGAACATTG 60.082 57.895 0.00 0.00 0.00 2.82
2419 2607 2.258013 ACACCCGCACGAACATTGG 61.258 57.895 0.00 0.00 0.00 3.16
2420 2608 2.671619 ACCCGCACGAACATTGGG 60.672 61.111 0.00 0.00 45.70 4.12
2421 2609 2.359354 CCCGCACGAACATTGGGA 60.359 61.111 0.00 0.00 42.77 4.37
2422 2610 2.686816 CCCGCACGAACATTGGGAC 61.687 63.158 0.00 0.00 42.77 4.46
2423 2611 2.474266 CGCACGAACATTGGGACG 59.526 61.111 0.00 0.00 0.00 4.79
2424 2612 2.175811 GCACGAACATTGGGACGC 59.824 61.111 0.00 0.00 0.00 5.19
2425 2613 2.474266 CACGAACATTGGGACGCG 59.526 61.111 3.53 3.53 0.00 6.01
2426 2614 2.029964 ACGAACATTGGGACGCGT 59.970 55.556 13.85 13.85 0.00 6.01
2427 2615 1.009903 CACGAACATTGGGACGCGTA 61.010 55.000 13.97 0.00 0.00 4.42
2428 2616 0.108520 ACGAACATTGGGACGCGTAT 60.109 50.000 13.97 0.00 0.00 3.06
2429 2617 1.003851 CGAACATTGGGACGCGTATT 58.996 50.000 13.97 0.00 0.00 1.89
2430 2618 1.005347 CGAACATTGGGACGCGTATTC 60.005 52.381 13.97 5.26 0.00 1.75
2431 2619 1.329599 GAACATTGGGACGCGTATTCC 59.670 52.381 13.97 15.28 0.00 3.01
2432 2620 0.250793 ACATTGGGACGCGTATTCCA 59.749 50.000 13.97 17.93 34.45 3.53
2433 2621 0.937304 CATTGGGACGCGTATTCCAG 59.063 55.000 13.97 6.20 34.45 3.86
2434 2622 0.828022 ATTGGGACGCGTATTCCAGA 59.172 50.000 13.97 11.47 34.45 3.86
2435 2623 0.174845 TTGGGACGCGTATTCCAGAG 59.825 55.000 13.97 0.00 34.45 3.35
2436 2624 0.681887 TGGGACGCGTATTCCAGAGA 60.682 55.000 13.97 0.00 34.45 3.10
2437 2625 0.674534 GGGACGCGTATTCCAGAGAT 59.325 55.000 13.97 0.00 34.45 2.75
2438 2626 1.068741 GGGACGCGTATTCCAGAGATT 59.931 52.381 13.97 0.00 34.45 2.40
2439 2627 2.395654 GGACGCGTATTCCAGAGATTC 58.604 52.381 13.97 0.00 32.82 2.52
2440 2628 2.223735 GGACGCGTATTCCAGAGATTCA 60.224 50.000 13.97 0.00 32.82 2.57
2441 2629 2.789893 GACGCGTATTCCAGAGATTCAC 59.210 50.000 13.97 0.00 0.00 3.18
2442 2630 2.165641 ACGCGTATTCCAGAGATTCACA 59.834 45.455 11.67 0.00 0.00 3.58
2443 2631 3.186909 CGCGTATTCCAGAGATTCACAA 58.813 45.455 0.00 0.00 0.00 3.33
2444 2632 3.804325 CGCGTATTCCAGAGATTCACAAT 59.196 43.478 0.00 0.00 0.00 2.71
2445 2633 4.084849 CGCGTATTCCAGAGATTCACAATC 60.085 45.833 0.00 0.00 38.20 2.67
2460 2648 9.118300 AGATTCACAATCTCCAAATTATCAGAC 57.882 33.333 0.00 0.00 44.79 3.51
2461 2649 9.118300 GATTCACAATCTCCAAATTATCAGACT 57.882 33.333 0.00 0.00 35.02 3.24
2462 2650 8.498054 TTCACAATCTCCAAATTATCAGACTC 57.502 34.615 0.00 0.00 0.00 3.36
2463 2651 6.758416 TCACAATCTCCAAATTATCAGACTCG 59.242 38.462 0.00 0.00 0.00 4.18
2464 2652 6.758416 CACAATCTCCAAATTATCAGACTCGA 59.242 38.462 0.00 0.00 0.00 4.04
2465 2653 7.278646 CACAATCTCCAAATTATCAGACTCGAA 59.721 37.037 0.00 0.00 0.00 3.71
2466 2654 7.824289 ACAATCTCCAAATTATCAGACTCGAAA 59.176 33.333 0.00 0.00 0.00 3.46
2467 2655 8.668353 CAATCTCCAAATTATCAGACTCGAAAA 58.332 33.333 0.00 0.00 0.00 2.29
2468 2656 7.596749 TCTCCAAATTATCAGACTCGAAAAC 57.403 36.000 0.00 0.00 0.00 2.43
2469 2657 6.594159 TCTCCAAATTATCAGACTCGAAAACC 59.406 38.462 0.00 0.00 0.00 3.27
2470 2658 6.234920 TCCAAATTATCAGACTCGAAAACCA 58.765 36.000 0.00 0.00 0.00 3.67
2471 2659 6.148811 TCCAAATTATCAGACTCGAAAACCAC 59.851 38.462 0.00 0.00 0.00 4.16
2472 2660 6.314784 CAAATTATCAGACTCGAAAACCACC 58.685 40.000 0.00 0.00 0.00 4.61
2473 2661 4.884668 TTATCAGACTCGAAAACCACCT 57.115 40.909 0.00 0.00 0.00 4.00
2474 2662 2.814280 TCAGACTCGAAAACCACCTC 57.186 50.000 0.00 0.00 0.00 3.85
2475 2663 2.036387 TCAGACTCGAAAACCACCTCA 58.964 47.619 0.00 0.00 0.00 3.86
2476 2664 2.035961 TCAGACTCGAAAACCACCTCAG 59.964 50.000 0.00 0.00 0.00 3.35
2477 2665 2.035961 CAGACTCGAAAACCACCTCAGA 59.964 50.000 0.00 0.00 0.00 3.27
2478 2666 2.698797 AGACTCGAAAACCACCTCAGAA 59.301 45.455 0.00 0.00 0.00 3.02
2479 2667 3.325135 AGACTCGAAAACCACCTCAGAAT 59.675 43.478 0.00 0.00 0.00 2.40
2480 2668 4.527038 AGACTCGAAAACCACCTCAGAATA 59.473 41.667 0.00 0.00 0.00 1.75
2481 2669 4.822026 ACTCGAAAACCACCTCAGAATAG 58.178 43.478 0.00 0.00 0.00 1.73
2482 2670 3.596214 TCGAAAACCACCTCAGAATAGC 58.404 45.455 0.00 0.00 0.00 2.97
2483 2671 2.678336 CGAAAACCACCTCAGAATAGCC 59.322 50.000 0.00 0.00 0.00 3.93
2484 2672 3.619979 CGAAAACCACCTCAGAATAGCCT 60.620 47.826 0.00 0.00 0.00 4.58
2485 2673 3.636153 AAACCACCTCAGAATAGCCTC 57.364 47.619 0.00 0.00 0.00 4.70
2486 2674 1.115467 ACCACCTCAGAATAGCCTCG 58.885 55.000 0.00 0.00 0.00 4.63
2487 2675 1.115467 CCACCTCAGAATAGCCTCGT 58.885 55.000 0.00 0.00 0.00 4.18
2488 2676 2.307768 CCACCTCAGAATAGCCTCGTA 58.692 52.381 0.00 0.00 0.00 3.43
2489 2677 2.294791 CCACCTCAGAATAGCCTCGTAG 59.705 54.545 0.00 0.00 0.00 3.51
2490 2678 3.215151 CACCTCAGAATAGCCTCGTAGA 58.785 50.000 0.00 0.00 0.00 2.59
2491 2679 3.823873 CACCTCAGAATAGCCTCGTAGAT 59.176 47.826 0.00 0.00 33.89 1.98
2492 2680 3.823873 ACCTCAGAATAGCCTCGTAGATG 59.176 47.826 0.00 0.00 33.89 2.90
2493 2681 4.075682 CCTCAGAATAGCCTCGTAGATGA 58.924 47.826 0.00 0.00 33.89 2.92
2494 2682 4.155826 CCTCAGAATAGCCTCGTAGATGAG 59.844 50.000 0.00 0.00 33.89 2.90
2495 2683 3.504134 TCAGAATAGCCTCGTAGATGAGC 59.496 47.826 0.00 0.00 33.89 4.26
2496 2684 3.254411 CAGAATAGCCTCGTAGATGAGCA 59.746 47.826 0.00 0.00 33.89 4.26
2497 2685 3.891977 AGAATAGCCTCGTAGATGAGCAA 59.108 43.478 0.00 0.00 33.89 3.91
2498 2686 4.342378 AGAATAGCCTCGTAGATGAGCAAA 59.658 41.667 0.00 0.00 33.89 3.68
2499 2687 2.593346 AGCCTCGTAGATGAGCAAAG 57.407 50.000 0.00 0.00 33.89 2.77
2500 2688 2.103373 AGCCTCGTAGATGAGCAAAGA 58.897 47.619 0.00 0.00 33.89 2.52
2501 2689 2.100584 AGCCTCGTAGATGAGCAAAGAG 59.899 50.000 0.00 0.00 33.89 2.85
2502 2690 2.099921 GCCTCGTAGATGAGCAAAGAGA 59.900 50.000 0.00 0.00 33.89 3.10
2503 2691 3.429547 GCCTCGTAGATGAGCAAAGAGAA 60.430 47.826 0.00 0.00 33.89 2.87
2504 2692 4.109050 CCTCGTAGATGAGCAAAGAGAAC 58.891 47.826 0.00 0.00 33.89 3.01
2505 2693 4.380973 CCTCGTAGATGAGCAAAGAGAACA 60.381 45.833 0.00 0.00 33.89 3.18
2506 2694 4.486090 TCGTAGATGAGCAAAGAGAACAC 58.514 43.478 0.00 0.00 0.00 3.32
2507 2695 3.614616 CGTAGATGAGCAAAGAGAACACC 59.385 47.826 0.00 0.00 0.00 4.16
2508 2696 3.777106 AGATGAGCAAAGAGAACACCA 57.223 42.857 0.00 0.00 0.00 4.17
2509 2697 4.298103 AGATGAGCAAAGAGAACACCAT 57.702 40.909 0.00 0.00 0.00 3.55
2510 2698 4.260170 AGATGAGCAAAGAGAACACCATC 58.740 43.478 0.00 0.00 0.00 3.51
2511 2699 2.416747 TGAGCAAAGAGAACACCATCG 58.583 47.619 0.00 0.00 0.00 3.84
2512 2700 2.224281 TGAGCAAAGAGAACACCATCGT 60.224 45.455 0.00 0.00 0.00 3.73
2513 2701 2.146342 AGCAAAGAGAACACCATCGTG 58.854 47.619 0.00 0.00 46.11 4.35
2522 2710 3.242268 CACCATCGTGTAGAGCGAG 57.758 57.895 0.00 0.00 41.83 5.03
2523 2711 0.452184 CACCATCGTGTAGAGCGAGT 59.548 55.000 0.00 0.00 41.83 4.18
2524 2712 0.452184 ACCATCGTGTAGAGCGAGTG 59.548 55.000 0.00 0.00 41.83 3.51
2525 2713 0.867753 CCATCGTGTAGAGCGAGTGC 60.868 60.000 0.00 0.00 41.83 4.40
2526 2714 0.867753 CATCGTGTAGAGCGAGTGCC 60.868 60.000 0.00 0.00 44.31 5.01
2527 2715 1.032657 ATCGTGTAGAGCGAGTGCCT 61.033 55.000 0.00 0.00 44.31 4.75
2528 2716 1.226435 CGTGTAGAGCGAGTGCCTC 60.226 63.158 0.00 0.00 44.31 4.70
2539 2727 2.715737 GAGTGCCTCGGCTATAAGAG 57.284 55.000 9.65 0.00 42.51 2.85
2547 2735 4.433186 CTCGGCTATAAGAGGATCAGTG 57.567 50.000 0.00 0.00 37.82 3.66
2548 2736 4.075682 CTCGGCTATAAGAGGATCAGTGA 58.924 47.826 0.00 0.00 37.82 3.41
2549 2737 4.667573 TCGGCTATAAGAGGATCAGTGAT 58.332 43.478 4.98 4.98 37.82 3.06
2550 2738 5.080337 TCGGCTATAAGAGGATCAGTGATT 58.920 41.667 7.16 0.00 37.82 2.57
2551 2739 5.184096 TCGGCTATAAGAGGATCAGTGATTC 59.816 44.000 7.16 4.97 37.82 2.52
2552 2740 5.623368 CGGCTATAAGAGGATCAGTGATTCC 60.623 48.000 7.16 9.88 37.82 3.01
2553 2741 5.337975 GGCTATAAGAGGATCAGTGATTCCC 60.338 48.000 7.16 4.89 37.82 3.97
2554 2742 4.881019 ATAAGAGGATCAGTGATTCCCG 57.119 45.455 7.16 0.00 37.82 5.14
2555 2743 1.418334 AGAGGATCAGTGATTCCCGG 58.582 55.000 7.16 0.00 37.82 5.73
2556 2744 0.394565 GAGGATCAGTGATTCCCGGG 59.605 60.000 16.85 16.85 33.17 5.73
2557 2745 0.326618 AGGATCAGTGATTCCCGGGT 60.327 55.000 22.86 0.14 0.00 5.28
2558 2746 0.106894 GGATCAGTGATTCCCGGGTC 59.893 60.000 22.86 12.80 0.00 4.46
2559 2747 1.123928 GATCAGTGATTCCCGGGTCT 58.876 55.000 22.86 9.09 0.00 3.85
2560 2748 1.486726 GATCAGTGATTCCCGGGTCTT 59.513 52.381 22.86 6.31 0.00 3.01
2561 2749 0.902531 TCAGTGATTCCCGGGTCTTC 59.097 55.000 22.86 16.01 0.00 2.87
2562 2750 0.905357 CAGTGATTCCCGGGTCTTCT 59.095 55.000 22.86 11.35 0.00 2.85
2563 2751 1.279271 CAGTGATTCCCGGGTCTTCTT 59.721 52.381 22.86 0.40 0.00 2.52
2564 2752 1.279271 AGTGATTCCCGGGTCTTCTTG 59.721 52.381 22.86 0.00 0.00 3.02
2565 2753 1.003233 GTGATTCCCGGGTCTTCTTGT 59.997 52.381 22.86 0.00 0.00 3.16
2566 2754 2.235402 GTGATTCCCGGGTCTTCTTGTA 59.765 50.000 22.86 0.00 0.00 2.41
2567 2755 2.907696 TGATTCCCGGGTCTTCTTGTAA 59.092 45.455 22.86 3.80 0.00 2.41
2568 2756 2.845363 TTCCCGGGTCTTCTTGTAAC 57.155 50.000 22.86 0.00 0.00 2.50
2569 2757 0.978907 TCCCGGGTCTTCTTGTAACC 59.021 55.000 22.86 0.00 0.00 2.85
2570 2758 0.688487 CCCGGGTCTTCTTGTAACCA 59.312 55.000 14.18 0.00 34.62 3.67
2571 2759 1.338769 CCCGGGTCTTCTTGTAACCAG 60.339 57.143 14.18 0.00 34.62 4.00
2572 2760 1.346722 CCGGGTCTTCTTGTAACCAGT 59.653 52.381 0.00 0.00 34.62 4.00
2573 2761 2.612221 CCGGGTCTTCTTGTAACCAGTC 60.612 54.545 0.00 0.00 34.62 3.51
2574 2762 2.299297 CGGGTCTTCTTGTAACCAGTCT 59.701 50.000 0.00 0.00 34.62 3.24
2575 2763 3.614390 CGGGTCTTCTTGTAACCAGTCTC 60.614 52.174 0.00 0.00 34.62 3.36
2576 2764 3.579151 GGGTCTTCTTGTAACCAGTCTCT 59.421 47.826 0.00 0.00 34.62 3.10
2577 2765 4.322123 GGGTCTTCTTGTAACCAGTCTCTC 60.322 50.000 0.00 0.00 34.62 3.20
2578 2766 4.281182 GGTCTTCTTGTAACCAGTCTCTCA 59.719 45.833 0.00 0.00 33.11 3.27
2579 2767 5.465935 GTCTTCTTGTAACCAGTCTCTCAG 58.534 45.833 0.00 0.00 0.00 3.35
2580 2768 3.944055 TCTTGTAACCAGTCTCTCAGC 57.056 47.619 0.00 0.00 0.00 4.26
2581 2769 3.501349 TCTTGTAACCAGTCTCTCAGCT 58.499 45.455 0.00 0.00 0.00 4.24
2582 2770 3.256879 TCTTGTAACCAGTCTCTCAGCTG 59.743 47.826 7.63 7.63 0.00 4.24
2583 2771 2.876581 TGTAACCAGTCTCTCAGCTGA 58.123 47.619 17.19 17.19 34.87 4.26
2584 2772 3.435275 TGTAACCAGTCTCTCAGCTGAT 58.565 45.455 18.63 0.00 34.87 2.90
2585 2773 3.834813 TGTAACCAGTCTCTCAGCTGATT 59.165 43.478 18.63 8.51 34.87 2.57
2586 2774 3.608316 AACCAGTCTCTCAGCTGATTC 57.392 47.619 18.63 8.05 34.87 2.52
2587 2775 2.533916 ACCAGTCTCTCAGCTGATTCA 58.466 47.619 18.63 3.35 34.87 2.57
2588 2776 2.496871 ACCAGTCTCTCAGCTGATTCAG 59.503 50.000 18.63 13.41 34.87 3.02
2607 2795 2.169832 GCTGGAGCTGTTAGTGTTGA 57.830 50.000 0.00 0.00 38.21 3.18
2608 2796 2.494059 GCTGGAGCTGTTAGTGTTGAA 58.506 47.619 0.00 0.00 38.21 2.69
2609 2797 3.077359 GCTGGAGCTGTTAGTGTTGAAT 58.923 45.455 0.00 0.00 38.21 2.57
2610 2798 4.253685 GCTGGAGCTGTTAGTGTTGAATA 58.746 43.478 0.00 0.00 38.21 1.75
2611 2799 4.695455 GCTGGAGCTGTTAGTGTTGAATAA 59.305 41.667 0.00 0.00 38.21 1.40
2612 2800 5.181245 GCTGGAGCTGTTAGTGTTGAATAAA 59.819 40.000 0.00 0.00 38.21 1.40
2613 2801 6.621596 GCTGGAGCTGTTAGTGTTGAATAAAG 60.622 42.308 0.00 0.00 38.21 1.85
2614 2802 6.530120 TGGAGCTGTTAGTGTTGAATAAAGA 58.470 36.000 0.00 0.00 0.00 2.52
2615 2803 6.650807 TGGAGCTGTTAGTGTTGAATAAAGAG 59.349 38.462 0.00 0.00 0.00 2.85
2616 2804 6.402658 GGAGCTGTTAGTGTTGAATAAAGAGC 60.403 42.308 0.00 0.00 0.00 4.09
2617 2805 6.234177 AGCTGTTAGTGTTGAATAAAGAGCT 58.766 36.000 0.00 0.00 30.04 4.09
2618 2806 6.370166 AGCTGTTAGTGTTGAATAAAGAGCTC 59.630 38.462 5.27 5.27 29.39 4.09
2619 2807 6.402658 GCTGTTAGTGTTGAATAAAGAGCTCC 60.403 42.308 10.93 0.00 0.00 4.70
2620 2808 5.938125 TGTTAGTGTTGAATAAAGAGCTCCC 59.062 40.000 10.93 0.00 0.00 4.30
2621 2809 4.640771 AGTGTTGAATAAAGAGCTCCCA 57.359 40.909 10.93 0.00 0.00 4.37
2622 2810 4.985538 AGTGTTGAATAAAGAGCTCCCAA 58.014 39.130 10.93 2.90 0.00 4.12
2623 2811 5.385198 AGTGTTGAATAAAGAGCTCCCAAA 58.615 37.500 10.93 0.00 0.00 3.28
2624 2812 6.012745 AGTGTTGAATAAAGAGCTCCCAAAT 58.987 36.000 10.93 0.00 0.00 2.32
2625 2813 6.494835 AGTGTTGAATAAAGAGCTCCCAAATT 59.505 34.615 10.93 5.52 0.00 1.82
2626 2814 7.015584 AGTGTTGAATAAAGAGCTCCCAAATTT 59.984 33.333 10.93 6.61 0.00 1.82
2627 2815 7.329471 GTGTTGAATAAAGAGCTCCCAAATTTC 59.671 37.037 10.93 7.35 0.00 2.17
2628 2816 6.530019 TGAATAAAGAGCTCCCAAATTTCC 57.470 37.500 10.93 0.00 0.00 3.13
2629 2817 5.422012 TGAATAAAGAGCTCCCAAATTTCCC 59.578 40.000 10.93 0.00 0.00 3.97
2630 2818 3.549898 AAAGAGCTCCCAAATTTCCCT 57.450 42.857 10.93 0.00 0.00 4.20
2631 2819 2.521547 AGAGCTCCCAAATTTCCCTG 57.478 50.000 10.93 0.00 0.00 4.45
2632 2820 0.820226 GAGCTCCCAAATTTCCCTGC 59.180 55.000 0.87 0.00 0.00 4.85
2633 2821 0.114954 AGCTCCCAAATTTCCCTGCA 59.885 50.000 0.00 0.00 0.00 4.41
2634 2822 0.975887 GCTCCCAAATTTCCCTGCAA 59.024 50.000 0.00 0.00 0.00 4.08
2635 2823 1.347378 GCTCCCAAATTTCCCTGCAAA 59.653 47.619 0.00 0.00 0.00 3.68
2636 2824 2.224499 GCTCCCAAATTTCCCTGCAAAA 60.224 45.455 0.00 0.00 0.00 2.44
2637 2825 3.747069 GCTCCCAAATTTCCCTGCAAAAA 60.747 43.478 0.00 0.00 0.00 1.94
2679 2867 6.694447 CCACATCATCTTTCCTTTCAACAAT 58.306 36.000 0.00 0.00 0.00 2.71
2691 2879 9.581099 TTTCCTTTCAACAATAGAGAACAAAAC 57.419 29.630 0.00 0.00 0.00 2.43
2701 2889 9.303116 ACAATAGAGAACAAAACTAGAGAGAGA 57.697 33.333 0.00 0.00 0.00 3.10
2716 2904 4.283212 AGAGAGAGAGAAAGAGTGGGTTTG 59.717 45.833 0.00 0.00 0.00 2.93
2717 2905 3.326297 AGAGAGAGAAAGAGTGGGTTTGG 59.674 47.826 0.00 0.00 0.00 3.28
2718 2906 3.318313 AGAGAGAAAGAGTGGGTTTGGA 58.682 45.455 0.00 0.00 0.00 3.53
2719 2907 3.326297 AGAGAGAAAGAGTGGGTTTGGAG 59.674 47.826 0.00 0.00 0.00 3.86
2978 3166 1.672881 GAGAGAGAGAGAGAGCAGTGC 59.327 57.143 7.13 7.13 0.00 4.40
3026 3214 2.340210 TGTGGCTGCTGTTCAAACTA 57.660 45.000 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.297664 CAGTAGCTAGTACGCTCGGT 58.702 55.000 0.00 0.00 41.30 4.69
9 10 2.795331 GCTGTTCCAGTAGCTAGTACGC 60.795 54.545 0.00 1.77 36.66 4.42
18 19 3.510388 TGATTCGAGCTGTTCCAGTAG 57.490 47.619 0.00 0.00 33.43 2.57
19 20 4.497507 CGTATGATTCGAGCTGTTCCAGTA 60.498 45.833 0.00 0.00 33.43 2.74
20 21 3.735208 CGTATGATTCGAGCTGTTCCAGT 60.735 47.826 0.00 0.00 33.43 4.00
21 22 2.791560 CGTATGATTCGAGCTGTTCCAG 59.208 50.000 0.00 0.00 34.12 3.86
22 23 2.165641 ACGTATGATTCGAGCTGTTCCA 59.834 45.455 0.00 0.00 0.00 3.53
113 117 0.814010 GGTTCGTGTCTGCCTTGTGT 60.814 55.000 0.00 0.00 0.00 3.72
174 198 1.917955 TCACGCTCGCTTTATCTTTCG 59.082 47.619 0.00 0.00 0.00 3.46
176 200 2.000447 GGTCACGCTCGCTTTATCTTT 59.000 47.619 0.00 0.00 0.00 2.52
177 201 1.641577 GGTCACGCTCGCTTTATCTT 58.358 50.000 0.00 0.00 0.00 2.40
242 266 1.657487 CTTGTCACGCGTCGAGTGT 60.657 57.895 25.11 4.34 45.87 3.55
334 366 2.103153 TCCTCCTCCTCTGTTTGTGT 57.897 50.000 0.00 0.00 0.00 3.72
336 368 1.912043 CCATCCTCCTCCTCTGTTTGT 59.088 52.381 0.00 0.00 0.00 2.83
337 369 1.211457 CCCATCCTCCTCCTCTGTTTG 59.789 57.143 0.00 0.00 0.00 2.93
339 371 0.985490 GCCCATCCTCCTCCTCTGTT 60.985 60.000 0.00 0.00 0.00 3.16
340 372 1.383803 GCCCATCCTCCTCCTCTGT 60.384 63.158 0.00 0.00 0.00 3.41
346 378 3.620785 ATCGCGCCCATCCTCCTC 61.621 66.667 0.00 0.00 0.00 3.71
347 379 3.933722 CATCGCGCCCATCCTCCT 61.934 66.667 0.00 0.00 0.00 3.69
348 380 4.996434 CCATCGCGCCCATCCTCC 62.996 72.222 0.00 0.00 0.00 4.30
362 398 3.006728 TCCGGTTTCTCCCGCCAT 61.007 61.111 0.00 0.00 46.71 4.40
365 401 2.184579 CTCTCCGGTTTCTCCCGC 59.815 66.667 0.00 0.00 46.71 6.13
370 406 1.316706 CGAGCTCCTCTCCGGTTTCT 61.317 60.000 8.47 0.00 38.62 2.52
377 413 2.723124 GATCATTCGAGCTCCTCTCC 57.277 55.000 8.47 0.00 38.62 3.71
475 511 2.415608 GGGTGAGTCGAGGCGATCA 61.416 63.158 0.00 0.00 38.42 2.92
624 682 1.605058 CCCCGGTGCCCTCTATATCG 61.605 65.000 0.00 0.00 0.00 2.92
714 776 0.478507 GAGAGGAGAGGAGAGGAGGG 59.521 65.000 0.00 0.00 0.00 4.30
786 852 3.954560 GCAACTGCAGCAATGGCACAT 62.955 52.381 15.27 0.00 44.61 3.21
795 861 2.513435 TGTCACGCAACTGCAGCA 60.513 55.556 15.27 0.00 42.21 4.41
899 989 3.244353 TGAGAATAATGGGAGCAGCTAGC 60.244 47.826 6.62 6.62 46.19 3.42
906 996 3.471680 GACAGGTGAGAATAATGGGAGC 58.528 50.000 0.00 0.00 0.00 4.70
930 1020 5.990386 AGACGATCAGAAGATGGATCAAATG 59.010 40.000 0.00 0.00 39.88 2.32
931 1021 6.172136 AGACGATCAGAAGATGGATCAAAT 57.828 37.500 0.00 0.00 39.88 2.32
934 1024 4.520874 GGTAGACGATCAGAAGATGGATCA 59.479 45.833 0.00 0.00 39.88 2.92
935 1025 4.082463 GGGTAGACGATCAGAAGATGGATC 60.082 50.000 0.00 0.00 37.22 3.36
936 1026 3.829601 GGGTAGACGATCAGAAGATGGAT 59.170 47.826 0.00 0.00 34.46 3.41
937 1027 3.223435 GGGTAGACGATCAGAAGATGGA 58.777 50.000 0.00 0.00 34.46 3.41
938 1028 2.030717 CGGGTAGACGATCAGAAGATGG 60.031 54.545 0.00 0.00 36.21 3.51
939 1029 2.605823 GCGGGTAGACGATCAGAAGATG 60.606 54.545 0.00 0.00 33.72 2.90
952 1042 2.044252 AGAAGGCGAGCGGGTAGA 60.044 61.111 0.00 0.00 0.00 2.59
963 1053 0.742635 CTCGCAGGGAAAGAGAAGGC 60.743 60.000 0.00 0.00 34.13 4.35
1034 1137 5.439721 TCAGAATCCATGAACATTACAGGG 58.560 41.667 0.00 0.00 40.03 4.45
1119 1252 0.392595 GAGAAAAGCGTTCCCGGGAT 60.393 55.000 27.48 7.24 33.68 3.85
1170 1307 0.246360 CAGGCAGTGTATGACCGACA 59.754 55.000 0.00 0.00 37.86 4.35
1183 1320 0.957395 AGACGTTTGGATGCAGGCAG 60.957 55.000 0.00 0.00 0.00 4.85
1243 1391 1.735386 GATCTTCTGCAGCAGAGCAA 58.265 50.000 23.83 14.31 45.13 3.91
1347 1495 2.139118 GAACAGAAAAGAGCAGAGCGT 58.861 47.619 0.00 0.00 0.00 5.07
1359 1507 7.093333 TGTCTAATGGATCTAGCAGAACAGAAA 60.093 37.037 0.00 0.00 0.00 2.52
1383 1552 2.028476 TCATTCGATCGGTGGTCTTTGT 60.028 45.455 16.41 0.00 0.00 2.83
1416 1585 2.679642 AGCAGAGCAGAGCCGTCT 60.680 61.111 0.00 0.00 0.00 4.18
1444 1613 1.231958 TGCCTGGCGAAGTAAAACGG 61.232 55.000 14.98 0.00 0.00 4.44
1452 1621 3.327148 CATCGATGCCTGGCGAAG 58.673 61.111 13.37 7.46 40.20 3.79
1529 1698 2.941333 CAGCTTGCTCACCACGTG 59.059 61.111 9.08 9.08 34.45 4.49
1639 1808 1.842381 CTTCCTTCTTGGCCCCGTCT 61.842 60.000 0.00 0.00 35.26 4.18
1641 1810 2.757077 CTTCCTTCTTGGCCCCGT 59.243 61.111 0.00 0.00 35.26 5.28
1644 1813 2.751837 CGCCTTCCTTCTTGGCCC 60.752 66.667 0.00 0.00 43.42 5.80
1645 1814 2.751837 CCGCCTTCCTTCTTGGCC 60.752 66.667 0.00 0.00 43.42 5.36
1687 1859 3.372554 CTCCTTCTTCCCGTCGCCC 62.373 68.421 0.00 0.00 0.00 6.13
1705 1877 3.387947 TCCTTCTTCCCGTCGCCC 61.388 66.667 0.00 0.00 0.00 6.13
1744 1919 2.342279 CCGTCCTTCTTGCCGTCA 59.658 61.111 0.00 0.00 0.00 4.35
1801 1976 1.118965 TCTGGTCGTCCTTCTTGCCA 61.119 55.000 0.00 0.00 34.23 4.92
1899 2074 1.203758 TCATCATGTAGTCCGCGTTGT 59.796 47.619 4.92 0.00 0.00 3.32
1906 2081 4.694339 GGTACTGGTTCATCATGTAGTCC 58.306 47.826 0.00 0.00 0.00 3.85
2070 2249 2.515523 GCATGCATGGTCGCCTCT 60.516 61.111 27.34 0.00 0.00 3.69
2072 2251 2.124024 ATGCATGCATGGTCGCCT 60.124 55.556 31.74 6.34 35.03 5.52
2114 2293 1.504359 TGCTGGTCTCGTAAAAACGG 58.496 50.000 0.00 0.00 0.00 4.44
2251 2439 0.827507 GAATGTTGGGTGGCTGTGGT 60.828 55.000 0.00 0.00 0.00 4.16
2252 2440 1.865788 CGAATGTTGGGTGGCTGTGG 61.866 60.000 0.00 0.00 0.00 4.17
2253 2441 1.580942 CGAATGTTGGGTGGCTGTG 59.419 57.895 0.00 0.00 0.00 3.66
2254 2442 1.603455 CCGAATGTTGGGTGGCTGT 60.603 57.895 0.00 0.00 0.00 4.40
2255 2443 1.178534 AACCGAATGTTGGGTGGCTG 61.179 55.000 0.00 0.00 39.36 4.85
2256 2444 0.402504 TAACCGAATGTTGGGTGGCT 59.597 50.000 0.00 0.00 39.36 4.75
2257 2445 0.524414 GTAACCGAATGTTGGGTGGC 59.476 55.000 0.00 0.00 39.36 5.01
2258 2446 1.898902 TGTAACCGAATGTTGGGTGG 58.101 50.000 0.00 0.00 39.36 4.61
2259 2447 2.422127 GGATGTAACCGAATGTTGGGTG 59.578 50.000 0.00 0.00 39.36 4.61
2260 2448 2.040545 TGGATGTAACCGAATGTTGGGT 59.959 45.455 0.00 0.00 41.33 4.51
2261 2449 2.682856 CTGGATGTAACCGAATGTTGGG 59.317 50.000 0.00 0.00 37.83 4.12
2262 2450 2.682856 CCTGGATGTAACCGAATGTTGG 59.317 50.000 0.00 0.00 37.83 3.77
2263 2451 2.682856 CCCTGGATGTAACCGAATGTTG 59.317 50.000 0.00 0.00 37.83 3.33
2264 2452 2.307686 ACCCTGGATGTAACCGAATGTT 59.692 45.455 0.00 0.00 41.11 2.71
2265 2453 1.913419 ACCCTGGATGTAACCGAATGT 59.087 47.619 0.00 0.00 0.00 2.71
2266 2454 2.288666 CACCCTGGATGTAACCGAATG 58.711 52.381 0.00 0.00 0.00 2.67
2267 2455 1.408266 GCACCCTGGATGTAACCGAAT 60.408 52.381 0.00 0.00 0.00 3.34
2268 2456 0.035820 GCACCCTGGATGTAACCGAA 60.036 55.000 0.00 0.00 0.00 4.30
2269 2457 0.907704 AGCACCCTGGATGTAACCGA 60.908 55.000 0.00 0.00 0.00 4.69
2270 2458 0.828022 TAGCACCCTGGATGTAACCG 59.172 55.000 0.00 0.00 0.00 4.44
2271 2459 1.475213 GCTAGCACCCTGGATGTAACC 60.475 57.143 10.63 0.00 0.00 2.85
2272 2460 1.486726 AGCTAGCACCCTGGATGTAAC 59.513 52.381 18.83 0.00 0.00 2.50
2273 2461 1.879575 AGCTAGCACCCTGGATGTAA 58.120 50.000 18.83 0.00 0.00 2.41
2274 2462 1.486310 CAAGCTAGCACCCTGGATGTA 59.514 52.381 18.83 0.00 0.00 2.29
2275 2463 0.254178 CAAGCTAGCACCCTGGATGT 59.746 55.000 18.83 0.00 0.00 3.06
2276 2464 0.254178 ACAAGCTAGCACCCTGGATG 59.746 55.000 18.83 5.06 0.00 3.51
2277 2465 0.995024 AACAAGCTAGCACCCTGGAT 59.005 50.000 18.83 0.00 0.00 3.41
2278 2466 0.771127 AAACAAGCTAGCACCCTGGA 59.229 50.000 18.83 0.00 0.00 3.86
2279 2467 2.359900 CTAAACAAGCTAGCACCCTGG 58.640 52.381 18.83 0.00 0.00 4.45
2293 2481 2.031245 CGGCTCACATTTGTGCTAAACA 60.031 45.455 5.81 0.00 45.25 2.83
2294 2482 2.225491 TCGGCTCACATTTGTGCTAAAC 59.775 45.455 5.81 0.00 45.25 2.01
2295 2483 2.499197 TCGGCTCACATTTGTGCTAAA 58.501 42.857 5.81 0.00 45.25 1.85
2296 2484 2.177394 TCGGCTCACATTTGTGCTAA 57.823 45.000 5.81 0.00 45.25 3.09
2297 2485 2.177394 TTCGGCTCACATTTGTGCTA 57.823 45.000 5.81 0.00 45.25 3.49
2298 2486 1.001378 GTTTCGGCTCACATTTGTGCT 60.001 47.619 5.81 0.00 45.25 4.40
2299 2487 1.268999 TGTTTCGGCTCACATTTGTGC 60.269 47.619 5.81 0.00 45.25 4.57
2300 2488 2.772568 TGTTTCGGCTCACATTTGTG 57.227 45.000 4.29 4.29 46.91 3.33
2301 2489 4.615912 GCTAATGTTTCGGCTCACATTTGT 60.616 41.667 10.01 0.00 40.05 2.83
2302 2490 3.853671 GCTAATGTTTCGGCTCACATTTG 59.146 43.478 10.01 9.46 40.05 2.32
2303 2491 3.758554 AGCTAATGTTTCGGCTCACATTT 59.241 39.130 10.01 0.00 40.05 2.32
2304 2492 3.127548 CAGCTAATGTTTCGGCTCACATT 59.872 43.478 9.74 9.74 44.18 2.71
2305 2493 2.679837 CAGCTAATGTTTCGGCTCACAT 59.320 45.455 0.00 0.00 35.00 3.21
2306 2494 2.076100 CAGCTAATGTTTCGGCTCACA 58.924 47.619 0.00 0.00 32.30 3.58
2307 2495 2.346803 TCAGCTAATGTTTCGGCTCAC 58.653 47.619 0.00 0.00 32.30 3.51
2308 2496 2.760634 TCAGCTAATGTTTCGGCTCA 57.239 45.000 0.00 0.00 32.30 4.26
2309 2497 3.462021 AGATCAGCTAATGTTTCGGCTC 58.538 45.455 0.00 0.00 32.30 4.70
2310 2498 3.462021 GAGATCAGCTAATGTTTCGGCT 58.538 45.455 0.00 0.00 35.23 5.52
2311 2499 2.545946 GGAGATCAGCTAATGTTTCGGC 59.454 50.000 0.00 0.00 0.00 5.54
2312 2500 3.134458 GGGAGATCAGCTAATGTTTCGG 58.866 50.000 0.00 0.00 0.00 4.30
2313 2501 4.065321 AGGGAGATCAGCTAATGTTTCG 57.935 45.455 0.00 0.00 0.00 3.46
2314 2502 5.918608 TGTAGGGAGATCAGCTAATGTTTC 58.081 41.667 0.00 0.00 0.00 2.78
2315 2503 5.957771 TGTAGGGAGATCAGCTAATGTTT 57.042 39.130 0.00 0.00 0.00 2.83
2316 2504 5.744300 GCATGTAGGGAGATCAGCTAATGTT 60.744 44.000 0.00 0.00 0.00 2.71
2317 2505 4.262808 GCATGTAGGGAGATCAGCTAATGT 60.263 45.833 0.00 0.00 0.00 2.71
2318 2506 4.020396 AGCATGTAGGGAGATCAGCTAATG 60.020 45.833 0.00 0.00 0.00 1.90
2319 2507 4.166539 AGCATGTAGGGAGATCAGCTAAT 58.833 43.478 0.00 0.00 0.00 1.73
2320 2508 3.581101 AGCATGTAGGGAGATCAGCTAA 58.419 45.455 0.00 0.00 0.00 3.09
2321 2509 3.251016 AGCATGTAGGGAGATCAGCTA 57.749 47.619 0.00 0.00 0.00 3.32
2322 2510 2.100128 AGCATGTAGGGAGATCAGCT 57.900 50.000 0.00 0.00 0.00 4.24
2323 2511 4.061596 GTTTAGCATGTAGGGAGATCAGC 58.938 47.826 0.00 0.00 0.00 4.26
2324 2512 5.543507 AGTTTAGCATGTAGGGAGATCAG 57.456 43.478 0.00 0.00 0.00 2.90
2325 2513 5.897250 TGTAGTTTAGCATGTAGGGAGATCA 59.103 40.000 0.00 0.00 0.00 2.92
2326 2514 6.406692 TGTAGTTTAGCATGTAGGGAGATC 57.593 41.667 0.00 0.00 0.00 2.75
2327 2515 6.808321 TTGTAGTTTAGCATGTAGGGAGAT 57.192 37.500 0.00 0.00 0.00 2.75
2328 2516 6.614694 TTTGTAGTTTAGCATGTAGGGAGA 57.385 37.500 0.00 0.00 0.00 3.71
2329 2517 7.064728 GTCTTTTGTAGTTTAGCATGTAGGGAG 59.935 40.741 0.00 0.00 0.00 4.30
2330 2518 6.877322 GTCTTTTGTAGTTTAGCATGTAGGGA 59.123 38.462 0.00 0.00 0.00 4.20
2331 2519 6.879458 AGTCTTTTGTAGTTTAGCATGTAGGG 59.121 38.462 0.00 0.00 0.00 3.53
2332 2520 7.602644 TCAGTCTTTTGTAGTTTAGCATGTAGG 59.397 37.037 0.00 0.00 0.00 3.18
2333 2521 8.534333 TCAGTCTTTTGTAGTTTAGCATGTAG 57.466 34.615 0.00 0.00 0.00 2.74
2334 2522 8.896320 TTCAGTCTTTTGTAGTTTAGCATGTA 57.104 30.769 0.00 0.00 0.00 2.29
2335 2523 7.801716 TTCAGTCTTTTGTAGTTTAGCATGT 57.198 32.000 0.00 0.00 0.00 3.21
2336 2524 9.683069 ATTTTCAGTCTTTTGTAGTTTAGCATG 57.317 29.630 0.00 0.00 0.00 4.06
2347 2535 8.981647 GCATGTCATTTATTTTCAGTCTTTTGT 58.018 29.630 0.00 0.00 0.00 2.83
2348 2536 9.199982 AGCATGTCATTTATTTTCAGTCTTTTG 57.800 29.630 0.00 0.00 0.00 2.44
2349 2537 9.415544 GAGCATGTCATTTATTTTCAGTCTTTT 57.584 29.630 0.00 0.00 0.00 2.27
2350 2538 8.031277 GGAGCATGTCATTTATTTTCAGTCTTT 58.969 33.333 0.00 0.00 0.00 2.52
2351 2539 7.363268 GGGAGCATGTCATTTATTTTCAGTCTT 60.363 37.037 0.00 0.00 0.00 3.01
2352 2540 6.096001 GGGAGCATGTCATTTATTTTCAGTCT 59.904 38.462 0.00 0.00 0.00 3.24
2353 2541 6.096001 AGGGAGCATGTCATTTATTTTCAGTC 59.904 38.462 0.00 0.00 0.00 3.51
2354 2542 5.954150 AGGGAGCATGTCATTTATTTTCAGT 59.046 36.000 0.00 0.00 0.00 3.41
2355 2543 6.461110 AGGGAGCATGTCATTTATTTTCAG 57.539 37.500 0.00 0.00 0.00 3.02
2356 2544 7.953005 TTAGGGAGCATGTCATTTATTTTCA 57.047 32.000 0.00 0.00 0.00 2.69
2357 2545 8.854117 AGATTAGGGAGCATGTCATTTATTTTC 58.146 33.333 0.00 0.00 0.00 2.29
2358 2546 8.773033 AGATTAGGGAGCATGTCATTTATTTT 57.227 30.769 0.00 0.00 0.00 1.82
2359 2547 7.173907 CGAGATTAGGGAGCATGTCATTTATTT 59.826 37.037 0.00 0.00 0.00 1.40
2360 2548 6.652481 CGAGATTAGGGAGCATGTCATTTATT 59.348 38.462 0.00 0.00 0.00 1.40
2361 2549 6.169094 CGAGATTAGGGAGCATGTCATTTAT 58.831 40.000 0.00 0.00 0.00 1.40
2362 2550 5.511373 CCGAGATTAGGGAGCATGTCATTTA 60.511 44.000 0.00 0.00 0.00 1.40
2363 2551 4.384056 CGAGATTAGGGAGCATGTCATTT 58.616 43.478 0.00 0.00 0.00 2.32
2364 2552 3.244353 CCGAGATTAGGGAGCATGTCATT 60.244 47.826 0.00 0.00 0.00 2.57
2365 2553 2.301296 CCGAGATTAGGGAGCATGTCAT 59.699 50.000 0.00 0.00 0.00 3.06
2366 2554 1.688735 CCGAGATTAGGGAGCATGTCA 59.311 52.381 0.00 0.00 0.00 3.58
2367 2555 1.606737 GCCGAGATTAGGGAGCATGTC 60.607 57.143 0.00 0.00 0.00 3.06
2368 2556 0.394565 GCCGAGATTAGGGAGCATGT 59.605 55.000 0.00 0.00 0.00 3.21
2369 2557 0.321122 GGCCGAGATTAGGGAGCATG 60.321 60.000 0.00 0.00 0.00 4.06
2370 2558 0.764369 TGGCCGAGATTAGGGAGCAT 60.764 55.000 0.00 0.00 0.00 3.79
2371 2559 0.980754 TTGGCCGAGATTAGGGAGCA 60.981 55.000 0.00 0.00 0.00 4.26
2372 2560 0.250081 CTTGGCCGAGATTAGGGAGC 60.250 60.000 15.76 0.00 0.00 4.70
2373 2561 1.414158 TCTTGGCCGAGATTAGGGAG 58.586 55.000 19.55 0.00 0.00 4.30
2374 2562 2.103153 ATCTTGGCCGAGATTAGGGA 57.897 50.000 27.48 3.93 32.54 4.20
2375 2563 3.056465 GTCTATCTTGGCCGAGATTAGGG 60.056 52.174 35.44 23.02 37.54 3.53
2376 2564 3.366476 CGTCTATCTTGGCCGAGATTAGG 60.366 52.174 35.44 24.83 37.54 2.69
2377 2565 3.827625 CGTCTATCTTGGCCGAGATTAG 58.172 50.000 35.44 27.40 37.54 1.73
2378 2566 2.030185 GCGTCTATCTTGGCCGAGATTA 60.030 50.000 35.44 22.96 37.54 1.75
2379 2567 1.269831 GCGTCTATCTTGGCCGAGATT 60.270 52.381 35.44 21.30 37.54 2.40
2380 2568 0.315568 GCGTCTATCTTGGCCGAGAT 59.684 55.000 33.38 33.38 39.59 2.75
2381 2569 1.734137 GCGTCTATCTTGGCCGAGA 59.266 57.895 25.33 25.33 0.00 4.04
2382 2570 1.300233 GGCGTCTATCTTGGCCGAG 60.300 63.158 14.59 14.59 35.59 4.63
2383 2571 2.812499 GGCGTCTATCTTGGCCGA 59.188 61.111 0.00 0.00 35.59 5.54
2385 2573 1.090052 GTGTGGCGTCTATCTTGGCC 61.090 60.000 0.00 0.00 45.76 5.36
2386 2574 1.090052 GGTGTGGCGTCTATCTTGGC 61.090 60.000 0.00 0.00 0.00 4.52
2387 2575 0.462047 GGGTGTGGCGTCTATCTTGG 60.462 60.000 0.00 0.00 0.00 3.61
2388 2576 0.806102 CGGGTGTGGCGTCTATCTTG 60.806 60.000 0.00 0.00 0.00 3.02
2389 2577 1.515954 CGGGTGTGGCGTCTATCTT 59.484 57.895 0.00 0.00 0.00 2.40
2390 2578 3.077519 GCGGGTGTGGCGTCTATCT 62.078 63.158 0.00 0.00 0.00 1.98
2391 2579 2.585247 GCGGGTGTGGCGTCTATC 60.585 66.667 0.00 0.00 0.00 2.08
2392 2580 3.387091 TGCGGGTGTGGCGTCTAT 61.387 61.111 0.00 0.00 0.00 1.98
2393 2581 4.367023 GTGCGGGTGTGGCGTCTA 62.367 66.667 0.00 0.00 0.00 2.59
2399 2587 2.258013 AATGTTCGTGCGGGTGTGG 61.258 57.895 0.00 0.00 0.00 4.17
2400 2588 1.082169 CAATGTTCGTGCGGGTGTG 60.082 57.895 0.00 0.00 0.00 3.82
2401 2589 2.258013 CCAATGTTCGTGCGGGTGT 61.258 57.895 0.00 0.00 0.00 4.16
2402 2590 2.560861 CCAATGTTCGTGCGGGTG 59.439 61.111 0.00 0.00 0.00 4.61
2403 2591 2.671619 CCCAATGTTCGTGCGGGT 60.672 61.111 0.00 0.00 31.80 5.28
2404 2592 2.359354 TCCCAATGTTCGTGCGGG 60.359 61.111 0.00 0.00 38.34 6.13
2405 2593 2.867472 GTCCCAATGTTCGTGCGG 59.133 61.111 0.00 0.00 0.00 5.69
2406 2594 2.474266 CGTCCCAATGTTCGTGCG 59.526 61.111 0.00 0.00 0.00 5.34
2407 2595 2.175811 GCGTCCCAATGTTCGTGC 59.824 61.111 0.00 0.00 0.00 5.34
2408 2596 1.009903 TACGCGTCCCAATGTTCGTG 61.010 55.000 18.63 0.00 39.24 4.35
2409 2597 0.108520 ATACGCGTCCCAATGTTCGT 60.109 50.000 18.63 0.00 0.00 3.85
2410 2598 1.003851 AATACGCGTCCCAATGTTCG 58.996 50.000 18.63 0.00 0.00 3.95
2411 2599 1.329599 GGAATACGCGTCCCAATGTTC 59.670 52.381 18.63 9.71 0.00 3.18
2412 2600 1.339247 TGGAATACGCGTCCCAATGTT 60.339 47.619 18.63 0.03 33.89 2.71
2413 2601 0.250793 TGGAATACGCGTCCCAATGT 59.749 50.000 18.63 0.00 33.89 2.71
2414 2602 0.937304 CTGGAATACGCGTCCCAATG 59.063 55.000 18.63 7.52 33.89 2.82
2415 2603 0.828022 TCTGGAATACGCGTCCCAAT 59.172 50.000 18.63 0.00 33.89 3.16
2416 2604 0.174845 CTCTGGAATACGCGTCCCAA 59.825 55.000 18.63 11.44 33.89 4.12
2417 2605 0.681887 TCTCTGGAATACGCGTCCCA 60.682 55.000 18.63 20.50 33.89 4.37
2418 2606 0.674534 ATCTCTGGAATACGCGTCCC 59.325 55.000 18.63 16.68 33.89 4.46
2419 2607 2.223735 TGAATCTCTGGAATACGCGTCC 60.224 50.000 18.63 12.55 35.55 4.79
2420 2608 2.789893 GTGAATCTCTGGAATACGCGTC 59.210 50.000 18.63 0.56 0.00 5.19
2421 2609 2.165641 TGTGAATCTCTGGAATACGCGT 59.834 45.455 19.17 19.17 0.00 6.01
2422 2610 2.809446 TGTGAATCTCTGGAATACGCG 58.191 47.619 3.53 3.53 0.00 6.01
2423 2611 5.053145 AGATTGTGAATCTCTGGAATACGC 58.947 41.667 0.00 0.00 44.79 4.42
2435 2623 9.118300 AGTCTGATAATTTGGAGATTGTGAATC 57.882 33.333 0.00 0.00 38.20 2.52
2436 2624 9.118300 GAGTCTGATAATTTGGAGATTGTGAAT 57.882 33.333 0.00 0.00 0.00 2.57
2437 2625 7.278646 CGAGTCTGATAATTTGGAGATTGTGAA 59.721 37.037 0.00 0.00 0.00 3.18
2438 2626 6.758416 CGAGTCTGATAATTTGGAGATTGTGA 59.242 38.462 0.00 0.00 0.00 3.58
2439 2627 6.758416 TCGAGTCTGATAATTTGGAGATTGTG 59.242 38.462 0.00 0.00 0.00 3.33
2440 2628 6.878317 TCGAGTCTGATAATTTGGAGATTGT 58.122 36.000 0.00 0.00 0.00 2.71
2441 2629 7.776933 TTCGAGTCTGATAATTTGGAGATTG 57.223 36.000 0.00 0.00 0.00 2.67
2442 2630 8.669243 GTTTTCGAGTCTGATAATTTGGAGATT 58.331 33.333 0.00 0.00 0.00 2.40
2443 2631 7.281100 GGTTTTCGAGTCTGATAATTTGGAGAT 59.719 37.037 0.00 0.00 0.00 2.75
2444 2632 6.594159 GGTTTTCGAGTCTGATAATTTGGAGA 59.406 38.462 0.00 0.00 0.00 3.71
2445 2633 6.371548 TGGTTTTCGAGTCTGATAATTTGGAG 59.628 38.462 0.00 0.00 0.00 3.86
2446 2634 6.148811 GTGGTTTTCGAGTCTGATAATTTGGA 59.851 38.462 0.00 0.00 0.00 3.53
2447 2635 6.314784 GTGGTTTTCGAGTCTGATAATTTGG 58.685 40.000 0.00 0.00 0.00 3.28
2448 2636 6.149474 AGGTGGTTTTCGAGTCTGATAATTTG 59.851 38.462 0.00 0.00 0.00 2.32
2449 2637 6.238648 AGGTGGTTTTCGAGTCTGATAATTT 58.761 36.000 0.00 0.00 0.00 1.82
2450 2638 5.805728 AGGTGGTTTTCGAGTCTGATAATT 58.194 37.500 0.00 0.00 0.00 1.40
2451 2639 5.046591 TGAGGTGGTTTTCGAGTCTGATAAT 60.047 40.000 0.00 0.00 0.00 1.28
2452 2640 4.282449 TGAGGTGGTTTTCGAGTCTGATAA 59.718 41.667 0.00 0.00 0.00 1.75
2453 2641 3.830178 TGAGGTGGTTTTCGAGTCTGATA 59.170 43.478 0.00 0.00 0.00 2.15
2454 2642 2.632996 TGAGGTGGTTTTCGAGTCTGAT 59.367 45.455 0.00 0.00 0.00 2.90
2455 2643 2.035961 CTGAGGTGGTTTTCGAGTCTGA 59.964 50.000 0.00 0.00 0.00 3.27
2456 2644 2.035961 TCTGAGGTGGTTTTCGAGTCTG 59.964 50.000 0.00 0.00 0.00 3.51
2457 2645 2.317040 TCTGAGGTGGTTTTCGAGTCT 58.683 47.619 0.00 0.00 0.00 3.24
2458 2646 2.814280 TCTGAGGTGGTTTTCGAGTC 57.186 50.000 0.00 0.00 0.00 3.36
2459 2647 3.771577 ATTCTGAGGTGGTTTTCGAGT 57.228 42.857 0.00 0.00 0.00 4.18
2460 2648 3.619038 GCTATTCTGAGGTGGTTTTCGAG 59.381 47.826 0.00 0.00 0.00 4.04
2461 2649 3.596214 GCTATTCTGAGGTGGTTTTCGA 58.404 45.455 0.00 0.00 0.00 3.71
2462 2650 2.678336 GGCTATTCTGAGGTGGTTTTCG 59.322 50.000 0.00 0.00 0.00 3.46
2463 2651 3.942115 GAGGCTATTCTGAGGTGGTTTTC 59.058 47.826 0.00 0.00 0.00 2.29
2464 2652 3.619979 CGAGGCTATTCTGAGGTGGTTTT 60.620 47.826 0.00 0.00 0.00 2.43
2465 2653 2.093447 CGAGGCTATTCTGAGGTGGTTT 60.093 50.000 0.00 0.00 0.00 3.27
2466 2654 1.482593 CGAGGCTATTCTGAGGTGGTT 59.517 52.381 0.00 0.00 0.00 3.67
2467 2655 1.115467 CGAGGCTATTCTGAGGTGGT 58.885 55.000 0.00 0.00 0.00 4.16
2468 2656 1.115467 ACGAGGCTATTCTGAGGTGG 58.885 55.000 0.00 0.00 0.00 4.61
2469 2657 3.215151 TCTACGAGGCTATTCTGAGGTG 58.785 50.000 0.00 0.00 0.00 4.00
2470 2658 3.579534 TCTACGAGGCTATTCTGAGGT 57.420 47.619 0.00 0.00 0.00 3.85
2471 2659 4.075682 TCATCTACGAGGCTATTCTGAGG 58.924 47.826 0.00 0.00 0.00 3.86
2472 2660 4.379394 GCTCATCTACGAGGCTATTCTGAG 60.379 50.000 0.00 0.00 33.36 3.35
2473 2661 3.504134 GCTCATCTACGAGGCTATTCTGA 59.496 47.826 0.00 0.00 33.36 3.27
2474 2662 3.254411 TGCTCATCTACGAGGCTATTCTG 59.746 47.826 0.00 0.00 33.36 3.02
2475 2663 3.491342 TGCTCATCTACGAGGCTATTCT 58.509 45.455 0.00 0.00 33.36 2.40
2476 2664 3.924918 TGCTCATCTACGAGGCTATTC 57.075 47.619 0.00 0.00 33.36 1.75
2477 2665 4.342378 TCTTTGCTCATCTACGAGGCTATT 59.658 41.667 0.00 0.00 33.36 1.73
2478 2666 3.891977 TCTTTGCTCATCTACGAGGCTAT 59.108 43.478 0.00 0.00 33.36 2.97
2479 2667 3.288092 TCTTTGCTCATCTACGAGGCTA 58.712 45.455 0.00 0.00 33.36 3.93
2480 2668 2.100584 CTCTTTGCTCATCTACGAGGCT 59.899 50.000 0.00 0.00 33.36 4.58
2481 2669 2.099921 TCTCTTTGCTCATCTACGAGGC 59.900 50.000 0.00 0.00 33.36 4.70
2482 2670 4.109050 GTTCTCTTTGCTCATCTACGAGG 58.891 47.826 0.00 0.00 33.36 4.63
2483 2671 4.560819 GTGTTCTCTTTGCTCATCTACGAG 59.439 45.833 0.00 0.00 36.02 4.18
2484 2672 4.486090 GTGTTCTCTTTGCTCATCTACGA 58.514 43.478 0.00 0.00 0.00 3.43
2485 2673 3.614616 GGTGTTCTCTTTGCTCATCTACG 59.385 47.826 0.00 0.00 0.00 3.51
2486 2674 4.569943 TGGTGTTCTCTTTGCTCATCTAC 58.430 43.478 0.00 0.00 0.00 2.59
2487 2675 4.890158 TGGTGTTCTCTTTGCTCATCTA 57.110 40.909 0.00 0.00 0.00 1.98
2488 2676 3.777106 TGGTGTTCTCTTTGCTCATCT 57.223 42.857 0.00 0.00 0.00 2.90
2489 2677 3.063180 CGATGGTGTTCTCTTTGCTCATC 59.937 47.826 0.00 0.00 0.00 2.92
2490 2678 3.005554 CGATGGTGTTCTCTTTGCTCAT 58.994 45.455 0.00 0.00 0.00 2.90
2491 2679 2.224281 ACGATGGTGTTCTCTTTGCTCA 60.224 45.455 0.00 0.00 0.00 4.26
2492 2680 2.158449 CACGATGGTGTTCTCTTTGCTC 59.842 50.000 0.00 0.00 39.38 4.26
2493 2681 2.146342 CACGATGGTGTTCTCTTTGCT 58.854 47.619 0.00 0.00 39.38 3.91
2494 2682 2.601481 CACGATGGTGTTCTCTTTGC 57.399 50.000 0.00 0.00 39.38 3.68
2505 2693 0.452184 CACTCGCTCTACACGATGGT 59.548 55.000 0.00 0.00 39.12 3.55
2506 2694 0.867753 GCACTCGCTCTACACGATGG 60.868 60.000 0.00 0.00 39.12 3.51
2507 2695 0.867753 GGCACTCGCTCTACACGATG 60.868 60.000 0.00 0.00 39.12 3.84
2508 2696 1.032657 AGGCACTCGCTCTACACGAT 61.033 55.000 0.00 0.00 39.12 3.73
2509 2697 1.674651 AGGCACTCGCTCTACACGA 60.675 57.895 0.00 0.00 38.60 4.35
2510 2698 2.878429 AGGCACTCGCTCTACACG 59.122 61.111 0.00 0.00 38.60 4.49
2521 2709 1.133450 TCCTCTTATAGCCGAGGCACT 60.133 52.381 17.18 5.33 45.12 4.40
2522 2710 1.329256 TCCTCTTATAGCCGAGGCAC 58.671 55.000 17.18 0.00 45.12 5.01
2523 2711 2.171840 GATCCTCTTATAGCCGAGGCA 58.828 52.381 17.18 2.86 45.12 4.75
2524 2712 2.165437 CTGATCCTCTTATAGCCGAGGC 59.835 54.545 5.89 5.89 45.12 4.70
2525 2713 3.192422 CACTGATCCTCTTATAGCCGAGG 59.808 52.174 7.96 7.96 46.52 4.63
2526 2714 4.075682 TCACTGATCCTCTTATAGCCGAG 58.924 47.826 0.00 0.00 0.00 4.63
2527 2715 4.100279 TCACTGATCCTCTTATAGCCGA 57.900 45.455 0.00 0.00 0.00 5.54
2528 2716 5.398603 AATCACTGATCCTCTTATAGCCG 57.601 43.478 0.00 0.00 0.00 5.52
2529 2717 5.337975 GGGAATCACTGATCCTCTTATAGCC 60.338 48.000 0.00 0.00 0.00 3.93
2530 2718 5.623368 CGGGAATCACTGATCCTCTTATAGC 60.623 48.000 0.00 0.00 0.00 2.97
2531 2719 5.105554 CCGGGAATCACTGATCCTCTTATAG 60.106 48.000 0.00 0.00 0.00 1.31
2532 2720 4.772624 CCGGGAATCACTGATCCTCTTATA 59.227 45.833 0.00 0.00 0.00 0.98
2533 2721 3.580458 CCGGGAATCACTGATCCTCTTAT 59.420 47.826 0.00 0.00 0.00 1.73
2534 2722 2.965831 CCGGGAATCACTGATCCTCTTA 59.034 50.000 0.00 0.00 0.00 2.10
2535 2723 1.765314 CCGGGAATCACTGATCCTCTT 59.235 52.381 0.00 0.00 0.00 2.85
2536 2724 1.418334 CCGGGAATCACTGATCCTCT 58.582 55.000 0.00 0.00 0.00 3.69
2537 2725 0.394565 CCCGGGAATCACTGATCCTC 59.605 60.000 18.48 0.00 0.00 3.71
2538 2726 0.326618 ACCCGGGAATCACTGATCCT 60.327 55.000 32.02 0.00 0.00 3.24
2539 2727 0.106894 GACCCGGGAATCACTGATCC 59.893 60.000 32.02 0.00 0.00 3.36
2540 2728 1.123928 AGACCCGGGAATCACTGATC 58.876 55.000 32.02 11.11 0.00 2.92
2541 2729 1.486726 GAAGACCCGGGAATCACTGAT 59.513 52.381 32.02 0.00 0.00 2.90
2542 2730 0.902531 GAAGACCCGGGAATCACTGA 59.097 55.000 32.02 0.00 0.00 3.41
2543 2731 0.905357 AGAAGACCCGGGAATCACTG 59.095 55.000 32.02 0.00 0.00 3.66
2544 2732 1.279271 CAAGAAGACCCGGGAATCACT 59.721 52.381 32.02 15.40 0.00 3.41
2545 2733 1.003233 ACAAGAAGACCCGGGAATCAC 59.997 52.381 32.02 13.33 0.00 3.06
2546 2734 1.358152 ACAAGAAGACCCGGGAATCA 58.642 50.000 32.02 0.00 0.00 2.57
2547 2735 3.268330 GTTACAAGAAGACCCGGGAATC 58.732 50.000 32.02 21.25 0.00 2.52
2548 2736 2.026542 GGTTACAAGAAGACCCGGGAAT 60.027 50.000 32.02 12.69 0.00 3.01
2549 2737 1.348696 GGTTACAAGAAGACCCGGGAA 59.651 52.381 32.02 3.99 0.00 3.97
2550 2738 0.978907 GGTTACAAGAAGACCCGGGA 59.021 55.000 32.02 0.00 0.00 5.14
2551 2739 0.688487 TGGTTACAAGAAGACCCGGG 59.312 55.000 22.25 22.25 32.39 5.73
2552 2740 1.346722 ACTGGTTACAAGAAGACCCGG 59.653 52.381 0.00 0.00 32.39 5.73
2553 2741 2.299297 AGACTGGTTACAAGAAGACCCG 59.701 50.000 0.00 0.00 32.39 5.28
2554 2742 3.579151 AGAGACTGGTTACAAGAAGACCC 59.421 47.826 0.00 0.00 32.39 4.46
2555 2743 4.281182 TGAGAGACTGGTTACAAGAAGACC 59.719 45.833 0.00 0.00 0.00 3.85
2556 2744 5.455056 TGAGAGACTGGTTACAAGAAGAC 57.545 43.478 0.00 0.00 0.00 3.01
2557 2745 4.021894 GCTGAGAGACTGGTTACAAGAAGA 60.022 45.833 0.00 0.00 0.00 2.87
2558 2746 4.021544 AGCTGAGAGACTGGTTACAAGAAG 60.022 45.833 0.00 0.00 0.00 2.85
2559 2747 3.898123 AGCTGAGAGACTGGTTACAAGAA 59.102 43.478 0.00 0.00 0.00 2.52
2560 2748 3.256879 CAGCTGAGAGACTGGTTACAAGA 59.743 47.826 8.42 0.00 0.00 3.02
2561 2749 3.256879 TCAGCTGAGAGACTGGTTACAAG 59.743 47.826 13.74 0.00 34.57 3.16
2562 2750 3.230976 TCAGCTGAGAGACTGGTTACAA 58.769 45.455 13.74 0.00 34.57 2.41
2563 2751 2.876581 TCAGCTGAGAGACTGGTTACA 58.123 47.619 13.74 0.00 34.57 2.41
2564 2752 4.081972 TGAATCAGCTGAGAGACTGGTTAC 60.082 45.833 22.96 4.26 37.36 2.50
2565 2753 4.089361 TGAATCAGCTGAGAGACTGGTTA 58.911 43.478 22.96 0.00 37.36 2.85
2566 2754 2.902486 TGAATCAGCTGAGAGACTGGTT 59.098 45.455 22.96 8.62 39.90 3.67
2567 2755 2.496871 CTGAATCAGCTGAGAGACTGGT 59.503 50.000 22.96 0.00 34.57 4.00
2568 2756 3.167921 CTGAATCAGCTGAGAGACTGG 57.832 52.381 22.96 4.68 34.57 4.00
2588 2776 2.169832 TCAACACTAACAGCTCCAGC 57.830 50.000 0.00 0.00 42.49 4.85
2589 2777 6.650807 TCTTTATTCAACACTAACAGCTCCAG 59.349 38.462 0.00 0.00 0.00 3.86
2590 2778 6.530120 TCTTTATTCAACACTAACAGCTCCA 58.470 36.000 0.00 0.00 0.00 3.86
2591 2779 6.402658 GCTCTTTATTCAACACTAACAGCTCC 60.403 42.308 0.00 0.00 0.00 4.70
2592 2780 6.370166 AGCTCTTTATTCAACACTAACAGCTC 59.630 38.462 0.00 0.00 0.00 4.09
2593 2781 6.234177 AGCTCTTTATTCAACACTAACAGCT 58.766 36.000 0.00 0.00 0.00 4.24
2594 2782 6.402658 GGAGCTCTTTATTCAACACTAACAGC 60.403 42.308 14.64 0.00 0.00 4.40
2595 2783 6.092807 GGGAGCTCTTTATTCAACACTAACAG 59.907 42.308 14.64 0.00 0.00 3.16
2596 2784 5.938125 GGGAGCTCTTTATTCAACACTAACA 59.062 40.000 14.64 0.00 0.00 2.41
2597 2785 5.938125 TGGGAGCTCTTTATTCAACACTAAC 59.062 40.000 14.64 0.00 0.00 2.34
2598 2786 6.121776 TGGGAGCTCTTTATTCAACACTAA 57.878 37.500 14.64 0.00 0.00 2.24
2599 2787 5.755409 TGGGAGCTCTTTATTCAACACTA 57.245 39.130 14.64 0.00 0.00 2.74
2600 2788 4.640771 TGGGAGCTCTTTATTCAACACT 57.359 40.909 14.64 0.00 0.00 3.55
2601 2789 5.705609 TTTGGGAGCTCTTTATTCAACAC 57.294 39.130 14.64 0.00 0.00 3.32
2602 2790 6.916360 AATTTGGGAGCTCTTTATTCAACA 57.084 33.333 14.64 0.00 0.00 3.33
2603 2791 6.813649 GGAAATTTGGGAGCTCTTTATTCAAC 59.186 38.462 14.64 0.00 0.00 3.18
2604 2792 6.070824 GGGAAATTTGGGAGCTCTTTATTCAA 60.071 38.462 14.64 6.40 0.00 2.69
2605 2793 5.422012 GGGAAATTTGGGAGCTCTTTATTCA 59.578 40.000 14.64 0.45 0.00 2.57
2606 2794 5.658634 AGGGAAATTTGGGAGCTCTTTATTC 59.341 40.000 14.64 10.54 0.00 1.75
2607 2795 5.423290 CAGGGAAATTTGGGAGCTCTTTATT 59.577 40.000 14.64 5.95 0.00 1.40
2608 2796 4.958581 CAGGGAAATTTGGGAGCTCTTTAT 59.041 41.667 14.64 0.00 0.00 1.40
2609 2797 4.344104 CAGGGAAATTTGGGAGCTCTTTA 58.656 43.478 14.64 0.00 0.00 1.85
2610 2798 3.168292 CAGGGAAATTTGGGAGCTCTTT 58.832 45.455 14.64 5.60 0.00 2.52
2611 2799 2.812658 CAGGGAAATTTGGGAGCTCTT 58.187 47.619 14.64 0.00 0.00 2.85
2612 2800 1.618074 GCAGGGAAATTTGGGAGCTCT 60.618 52.381 14.64 0.00 0.00 4.09
2613 2801 0.820226 GCAGGGAAATTTGGGAGCTC 59.180 55.000 4.71 4.71 0.00 4.09
2614 2802 0.114954 TGCAGGGAAATTTGGGAGCT 59.885 50.000 0.00 0.00 0.00 4.09
2615 2803 0.975887 TTGCAGGGAAATTTGGGAGC 59.024 50.000 0.00 0.00 0.00 4.70
2616 2804 3.767902 TTTTGCAGGGAAATTTGGGAG 57.232 42.857 0.00 0.00 0.00 4.30
2637 2825 4.465886 TGTGGCTGTGGTATGTACTTTTT 58.534 39.130 0.00 0.00 0.00 1.94
2638 2826 4.093472 TGTGGCTGTGGTATGTACTTTT 57.907 40.909 0.00 0.00 0.00 2.27
2639 2827 3.780804 TGTGGCTGTGGTATGTACTTT 57.219 42.857 0.00 0.00 0.00 2.66
2640 2828 3.263170 TGATGTGGCTGTGGTATGTACTT 59.737 43.478 0.00 0.00 0.00 2.24
2656 2844 8.733458 TCTATTGTTGAAAGGAAAGATGATGTG 58.267 33.333 0.00 0.00 0.00 3.21
2679 2867 9.575868 TTTCTCTCTCTCTAGTTTTGTTCTCTA 57.424 33.333 0.00 0.00 0.00 2.43
2691 2879 4.855340 ACCCACTCTTTCTCTCTCTCTAG 58.145 47.826 0.00 0.00 0.00 2.43
2945 3133 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2946 3134 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2947 3135 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2948 3136 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2949 3137 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
2950 3138 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
2951 3139 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
2952 3140 3.386078 TGCTCTCTCTCTCTCTCTCTCTC 59.614 52.174 0.00 0.00 0.00 3.20
2953 3141 3.378512 TGCTCTCTCTCTCTCTCTCTCT 58.621 50.000 0.00 0.00 0.00 3.10
2954 3142 3.133721 ACTGCTCTCTCTCTCTCTCTCTC 59.866 52.174 0.00 0.00 0.00 3.20
2978 3166 2.635338 CACCCATCATGCATCGCG 59.365 61.111 0.00 0.00 0.00 5.87
2982 3170 1.699730 CATCACCACCCATCATGCAT 58.300 50.000 0.00 0.00 0.00 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.