Multiple sequence alignment - TraesCS4B01G313400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G313400 chr4B 100.000 2509 0 0 1 2509 603147427 603149935 0.000000e+00 4634.0
1 TraesCS4B01G313400 chr4B 85.514 1857 165 53 1 1830 602894556 602892777 0.000000e+00 1844.0
2 TraesCS4B01G313400 chr4B 93.397 1257 55 14 299 1546 603037308 603038545 0.000000e+00 1836.0
3 TraesCS4B01G313400 chr4B 86.026 1238 119 32 616 1830 602874061 602872855 0.000000e+00 1279.0
4 TraesCS4B01G313400 chr4B 88.960 625 55 7 900 1522 603026251 603025639 0.000000e+00 760.0
5 TraesCS4B01G313400 chr4B 90.027 371 27 4 2139 2504 472871585 472871950 2.920000e-129 472.0
6 TraesCS4B01G313400 chr4B 88.298 376 35 6 2139 2509 115077123 115076752 2.290000e-120 442.0
7 TraesCS4B01G313400 chr4B 87.831 378 34 7 2139 2509 417535829 417535457 1.380000e-117 433.0
8 TraesCS4B01G313400 chr4B 94.581 203 8 3 1 201 602883923 602883722 6.740000e-81 311.0
9 TraesCS4B01G313400 chr4B 82.918 281 39 7 306 581 602874338 602874062 6.930000e-61 244.0
10 TraesCS4B01G313400 chr4B 85.537 242 13 6 1 241 603037071 603037291 1.500000e-57 233.0
11 TraesCS4B01G313400 chr4B 86.957 92 12 0 1510 1601 603144486 603144395 1.230000e-18 104.0
12 TraesCS4B01G313400 chr4B 82.203 118 6 6 189 306 602882150 602882048 1.240000e-13 87.9
13 TraesCS4B01G313400 chr4D 93.101 1348 75 9 244 1586 477558239 477559573 0.000000e+00 1958.0
14 TraesCS4B01G313400 chr4D 87.850 1037 76 20 705 1711 477543847 477542831 0.000000e+00 1171.0
15 TraesCS4B01G313400 chr4D 95.238 168 7 1 1 167 477555867 477556034 5.320000e-67 265.0
16 TraesCS4B01G313400 chr4D 100.000 29 0 0 206 234 477558216 477558244 1.000000e-03 54.7
17 TraesCS4B01G313400 chr4A 90.562 890 66 10 702 1586 684470862 684471738 0.000000e+00 1162.0
18 TraesCS4B01G313400 chr4A 89.401 868 68 16 893 1748 684449413 684448558 0.000000e+00 1072.0
19 TraesCS4B01G313400 chr4A 83.113 906 89 33 7 901 684450474 684449622 0.000000e+00 767.0
20 TraesCS4B01G313400 chr4A 88.950 362 31 5 2139 2494 608474618 608474260 2.960000e-119 438.0
21 TraesCS4B01G313400 chr1A 81.382 1042 113 49 672 1661 372287967 372286955 0.000000e+00 774.0
22 TraesCS4B01G313400 chr1B 81.744 986 114 41 706 1661 401992690 401991741 0.000000e+00 763.0
23 TraesCS4B01G313400 chr1B 88.329 377 31 9 2139 2509 648108537 648108168 8.240000e-120 440.0
24 TraesCS4B01G313400 chr3B 89.516 372 28 7 2139 2503 146296807 146297174 6.320000e-126 460.0
25 TraesCS4B01G313400 chr3B 87.042 409 34 8 2115 2509 197773657 197773254 6.370000e-121 444.0
26 TraesCS4B01G313400 chr3B 87.766 376 37 4 2139 2509 676917054 676916683 4.960000e-117 431.0
27 TraesCS4B01G313400 chr2B 87.968 374 33 7 2139 2504 141720647 141720278 4.960000e-117 431.0
28 TraesCS4B01G313400 chr5D 79.459 185 25 9 384 560 512218422 512218243 4.380000e-23 119.0
29 TraesCS4B01G313400 chr5D 88.333 60 7 0 344 403 50971317 50971258 3.460000e-09 73.1
30 TraesCS4B01G313400 chr2D 83.333 120 17 3 325 443 403344398 403344515 9.490000e-20 108.0
31 TraesCS4B01G313400 chr1D 86.667 60 8 0 344 403 333332541 333332600 1.610000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G313400 chr4B 603147427 603149935 2508 False 4634.000000 4634 100.000 1 2509 1 chr4B.!!$F2 2508
1 TraesCS4B01G313400 chr4B 602892777 602894556 1779 True 1844.000000 1844 85.514 1 1830 1 chr4B.!!$R3 1829
2 TraesCS4B01G313400 chr4B 603037071 603038545 1474 False 1034.500000 1836 89.467 1 1546 2 chr4B.!!$F3 1545
3 TraesCS4B01G313400 chr4B 602872855 602874338 1483 True 761.500000 1279 84.472 306 1830 2 chr4B.!!$R6 1524
4 TraesCS4B01G313400 chr4B 603025639 603026251 612 True 760.000000 760 88.960 900 1522 1 chr4B.!!$R4 622
5 TraesCS4B01G313400 chr4D 477542831 477543847 1016 True 1171.000000 1171 87.850 705 1711 1 chr4D.!!$R1 1006
6 TraesCS4B01G313400 chr4D 477555867 477559573 3706 False 759.233333 1958 96.113 1 1586 3 chr4D.!!$F1 1585
7 TraesCS4B01G313400 chr4A 684470862 684471738 876 False 1162.000000 1162 90.562 702 1586 1 chr4A.!!$F1 884
8 TraesCS4B01G313400 chr4A 684448558 684450474 1916 True 919.500000 1072 86.257 7 1748 2 chr4A.!!$R2 1741
9 TraesCS4B01G313400 chr1A 372286955 372287967 1012 True 774.000000 774 81.382 672 1661 1 chr1A.!!$R1 989
10 TraesCS4B01G313400 chr1B 401991741 401992690 949 True 763.000000 763 81.744 706 1661 1 chr1B.!!$R1 955

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
239 2403 0.252696 TCACATGGAGGTAGGCAGGT 60.253 55.0 0.0 0.0 0.0 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2152 4667 0.033601 ACCACTTGTTGCAACCTGGA 60.034 50.0 30.43 12.73 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 107 3.812053 GTGATGAGCGCCTGATTAATCTT 59.188 43.478 16.24 0.00 0.00 2.40
107 109 4.274214 TGATGAGCGCCTGATTAATCTTTG 59.726 41.667 16.24 6.13 0.00 2.77
235 2399 0.466124 GGTCTCACATGGAGGTAGGC 59.534 60.000 10.23 0.00 44.19 3.93
236 2400 1.195115 GTCTCACATGGAGGTAGGCA 58.805 55.000 10.23 0.00 44.19 4.75
237 2401 1.137872 GTCTCACATGGAGGTAGGCAG 59.862 57.143 10.23 0.00 44.19 4.85
238 2402 0.467384 CTCACATGGAGGTAGGCAGG 59.533 60.000 0.00 0.00 40.13 4.85
239 2403 0.252696 TCACATGGAGGTAGGCAGGT 60.253 55.000 0.00 0.00 0.00 4.00
240 2404 1.007842 TCACATGGAGGTAGGCAGGTA 59.992 52.381 0.00 0.00 0.00 3.08
241 2405 1.139058 CACATGGAGGTAGGCAGGTAC 59.861 57.143 0.00 0.00 0.00 3.34
245 2409 1.330234 GGAGGTAGGCAGGTACTAGC 58.670 60.000 0.00 0.00 36.02 3.42
260 2424 2.240279 ACTAGCTAGCATAACCCTCGG 58.760 52.381 20.91 0.00 0.00 4.63
309 2473 1.353103 GCGCGCCCATATGCATATC 59.647 57.895 23.24 5.13 0.00 1.63
403 2571 1.347707 TGTTCTTCGAGGATGGCAAGT 59.652 47.619 0.00 0.00 0.00 3.16
445 2617 8.527810 TGTCAAATCCATCCCAGTTTATTTTAC 58.472 33.333 0.00 0.00 0.00 2.01
531 2704 5.824904 AATGTCAGATTTGTCATGCCTAC 57.175 39.130 0.00 0.00 34.12 3.18
878 3076 1.366111 AATCGCACATGGCCACGTAC 61.366 55.000 8.16 0.00 40.31 3.67
879 3077 3.848830 CGCACATGGCCACGTACG 61.849 66.667 10.54 10.54 40.31 3.67
880 3078 2.740826 GCACATGGCCACGTACGT 60.741 61.111 16.72 16.72 36.11 3.57
881 3079 2.736682 GCACATGGCCACGTACGTC 61.737 63.158 19.94 8.36 36.11 4.34
935 3357 2.425143 ACAGTTCGATCCCATGCATT 57.575 45.000 0.00 0.00 0.00 3.56
936 3358 2.019249 ACAGTTCGATCCCATGCATTG 58.981 47.619 0.00 0.00 0.00 2.82
951 3373 1.140161 ATTGCATGCACGCATCCAC 59.860 52.632 22.58 0.00 42.62 4.02
958 3380 2.271821 CACGCATCCACATCCCCA 59.728 61.111 0.00 0.00 0.00 4.96
989 3411 2.540265 ACAACACTCTCTCCAAGCTG 57.460 50.000 0.00 0.00 0.00 4.24
1172 3613 2.968156 CCGTTGTTGTTCCGCCGA 60.968 61.111 0.00 0.00 0.00 5.54
1257 3704 3.033764 GTGCGCCAACGTTCTCGA 61.034 61.111 19.12 5.28 42.83 4.04
1430 3877 1.483595 CCTCCTCCTCAACCACTGCA 61.484 60.000 0.00 0.00 0.00 4.41
1479 3928 1.449601 CAGGCCATTAACGGACGCT 60.450 57.895 5.01 0.00 40.05 5.07
1484 3933 2.481795 GGCCATTAACGGACGCTTACTA 60.482 50.000 0.00 0.00 0.00 1.82
1565 4050 4.606961 GTGTCCACATTTGAATCGTTGTT 58.393 39.130 0.00 0.00 0.00 2.83
1572 4075 5.624900 CACATTTGAATCGTTGTTACCAGTG 59.375 40.000 0.00 0.00 0.00 3.66
1581 4084 3.586892 GTTGTTACCAGTGCTACTCCTC 58.413 50.000 0.00 0.00 0.00 3.71
1713 4228 2.798501 GACGCGCGTGCACACATAT 61.799 57.895 42.90 11.87 42.97 1.78
1714 4229 2.349980 CGCGCGTGCACACATATG 60.350 61.111 24.19 0.00 42.97 1.78
1735 4250 2.279136 GCATACACACGTAGCTTCTTCG 59.721 50.000 0.00 0.00 0.00 3.79
1741 4256 4.805192 ACACACGTAGCTTCTTCGTTTTTA 59.195 37.500 0.00 0.00 35.48 1.52
1742 4257 5.051240 ACACACGTAGCTTCTTCGTTTTTAG 60.051 40.000 0.00 0.00 35.48 1.85
1745 4260 6.063272 CACGTAGCTTCTTCGTTTTTAGAAC 58.937 40.000 0.00 0.00 35.48 3.01
1746 4261 5.981915 ACGTAGCTTCTTCGTTTTTAGAACT 59.018 36.000 0.00 0.00 34.07 3.01
1747 4262 7.113965 CACGTAGCTTCTTCGTTTTTAGAACTA 59.886 37.037 0.00 0.00 35.48 2.24
1748 4263 7.811713 ACGTAGCTTCTTCGTTTTTAGAACTAT 59.188 33.333 0.00 0.00 34.07 2.12
1749 4264 9.282247 CGTAGCTTCTTCGTTTTTAGAACTATA 57.718 33.333 0.00 0.00 0.00 1.31
1765 4280 6.625267 AGAACTATAGTAGATGACACCCCAT 58.375 40.000 5.65 0.00 0.00 4.00
1766 4281 6.722129 AGAACTATAGTAGATGACACCCCATC 59.278 42.308 5.65 0.00 42.37 3.51
1785 4300 4.813235 GTTGCTGCGGGGGCCATA 62.813 66.667 4.39 0.00 0.00 2.74
1797 4312 4.208746 CGGGGGCCATACTAAAACAAATA 58.791 43.478 4.39 0.00 0.00 1.40
1862 4377 9.765795 ATAGTTATCTGTTTACATCTACTTGCC 57.234 33.333 0.00 0.00 0.00 4.52
1863 4378 6.757010 AGTTATCTGTTTACATCTACTTGCCG 59.243 38.462 0.00 0.00 0.00 5.69
1864 4379 3.259064 TCTGTTTACATCTACTTGCCGC 58.741 45.455 0.00 0.00 0.00 6.53
1865 4380 3.000041 CTGTTTACATCTACTTGCCGCA 59.000 45.455 0.00 0.00 0.00 5.69
1866 4381 3.403968 TGTTTACATCTACTTGCCGCAA 58.596 40.909 5.52 5.52 0.00 4.85
1867 4382 3.815962 TGTTTACATCTACTTGCCGCAAA 59.184 39.130 7.33 0.00 0.00 3.68
1868 4383 4.156182 GTTTACATCTACTTGCCGCAAAC 58.844 43.478 7.33 0.00 0.00 2.93
1869 4384 0.796312 ACATCTACTTGCCGCAAACG 59.204 50.000 7.33 0.00 39.67 3.60
1880 4395 4.577246 GCAAACGGGCGGCAAACA 62.577 61.111 12.47 0.00 0.00 2.83
1881 4396 2.338257 CAAACGGGCGGCAAACAT 59.662 55.556 12.47 0.00 0.00 2.71
1882 4397 2.021039 CAAACGGGCGGCAAACATG 61.021 57.895 12.47 0.00 0.00 3.21
1883 4398 3.219645 AAACGGGCGGCAAACATGG 62.220 57.895 12.47 0.00 0.00 3.66
1890 4405 2.877691 GGCAAACATGGCGAGACC 59.122 61.111 0.00 0.00 39.84 3.85
1914 4429 3.255397 AGGCTTGGCTGGCTGAGT 61.255 61.111 2.00 0.00 41.44 3.41
1915 4430 2.282745 GGCTTGGCTGGCTGAGTT 60.283 61.111 2.00 0.00 0.00 3.01
1916 4431 2.633509 GGCTTGGCTGGCTGAGTTG 61.634 63.158 2.00 0.00 0.00 3.16
1917 4432 1.900498 GCTTGGCTGGCTGAGTTGT 60.900 57.895 2.00 0.00 0.00 3.32
1918 4433 1.954528 CTTGGCTGGCTGAGTTGTG 59.045 57.895 2.00 0.00 0.00 3.33
1919 4434 2.138656 CTTGGCTGGCTGAGTTGTGC 62.139 60.000 2.00 0.00 0.00 4.57
1920 4435 2.595463 GGCTGGCTGAGTTGTGCA 60.595 61.111 0.00 0.00 0.00 4.57
1921 4436 2.195567 GGCTGGCTGAGTTGTGCAA 61.196 57.895 0.00 0.00 0.00 4.08
1922 4437 1.530013 GGCTGGCTGAGTTGTGCAAT 61.530 55.000 0.00 0.00 0.00 3.56
1923 4438 0.388134 GCTGGCTGAGTTGTGCAATG 60.388 55.000 0.00 0.00 0.00 2.82
1924 4439 0.242825 CTGGCTGAGTTGTGCAATGG 59.757 55.000 0.00 0.00 0.00 3.16
1925 4440 1.080298 GGCTGAGTTGTGCAATGGC 60.080 57.895 0.00 0.00 41.68 4.40
1926 4441 1.080298 GCTGAGTTGTGCAATGGCC 60.080 57.895 0.00 0.00 40.13 5.36
1927 4442 1.808531 GCTGAGTTGTGCAATGGCCA 61.809 55.000 8.56 8.56 40.13 5.36
1928 4443 0.038892 CTGAGTTGTGCAATGGCCAC 60.039 55.000 8.16 0.00 40.13 5.01
1929 4444 0.754587 TGAGTTGTGCAATGGCCACA 60.755 50.000 8.16 0.00 40.13 4.17
1930 4445 0.604578 GAGTTGTGCAATGGCCACAT 59.395 50.000 8.16 0.00 40.13 3.21
1931 4446 0.319083 AGTTGTGCAATGGCCACATG 59.681 50.000 8.16 12.36 40.13 3.21
1932 4447 1.004799 TTGTGCAATGGCCACATGC 60.005 52.632 29.60 29.60 40.13 4.06
1933 4448 1.755393 TTGTGCAATGGCCACATGCA 61.755 50.000 33.18 33.18 43.89 3.96
1934 4449 1.219664 GTGCAATGGCCACATGCAT 59.780 52.632 36.72 9.78 43.89 3.96
1935 4450 0.460722 GTGCAATGGCCACATGCATA 59.539 50.000 36.72 21.10 43.89 3.14
1936 4451 1.069513 GTGCAATGGCCACATGCATAT 59.930 47.619 36.72 8.29 43.89 1.78
1937 4452 1.069358 TGCAATGGCCACATGCATATG 59.931 47.619 33.18 14.08 43.89 1.78
1938 4453 1.606994 GCAATGGCCACATGCATATGG 60.607 52.381 30.70 20.11 43.89 2.74
1939 4454 1.689813 CAATGGCCACATGCATATGGT 59.310 47.619 24.51 2.62 43.89 3.55
1940 4455 1.334160 ATGGCCACATGCATATGGTG 58.666 50.000 24.51 16.01 43.89 4.17
1953 4468 3.731216 GCATATGGTGCGAGCTATATACG 59.269 47.826 4.56 0.00 45.23 3.06
1954 4469 2.941453 ATGGTGCGAGCTATATACGG 57.059 50.000 0.00 0.00 0.00 4.02
1955 4470 0.885879 TGGTGCGAGCTATATACGGG 59.114 55.000 0.00 0.00 0.00 5.28
1956 4471 1.171308 GGTGCGAGCTATATACGGGA 58.829 55.000 0.00 0.00 0.00 5.14
1957 4472 1.749634 GGTGCGAGCTATATACGGGAT 59.250 52.381 0.00 0.00 0.00 3.85
1958 4473 2.165845 GGTGCGAGCTATATACGGGATT 59.834 50.000 0.00 0.00 0.00 3.01
1959 4474 3.368116 GGTGCGAGCTATATACGGGATTT 60.368 47.826 0.00 0.00 0.00 2.17
1960 4475 4.142315 GGTGCGAGCTATATACGGGATTTA 60.142 45.833 0.00 0.00 0.00 1.40
1961 4476 5.451520 GGTGCGAGCTATATACGGGATTTAT 60.452 44.000 0.00 0.00 0.00 1.40
1962 4477 6.040878 GTGCGAGCTATATACGGGATTTATT 58.959 40.000 0.00 0.00 0.00 1.40
1963 4478 6.019801 GTGCGAGCTATATACGGGATTTATTG 60.020 42.308 0.00 0.00 0.00 1.90
1964 4479 6.040878 GCGAGCTATATACGGGATTTATTGT 58.959 40.000 0.00 0.00 0.00 2.71
1965 4480 6.019801 GCGAGCTATATACGGGATTTATTGTG 60.020 42.308 0.00 0.00 0.00 3.33
1966 4481 7.255569 CGAGCTATATACGGGATTTATTGTGA 58.744 38.462 0.00 0.00 0.00 3.58
1967 4482 7.220300 CGAGCTATATACGGGATTTATTGTGAC 59.780 40.741 0.00 0.00 0.00 3.67
1968 4483 7.903145 AGCTATATACGGGATTTATTGTGACA 58.097 34.615 0.00 0.00 0.00 3.58
1969 4484 8.372459 AGCTATATACGGGATTTATTGTGACAA 58.628 33.333 0.00 0.00 0.00 3.18
1970 4485 8.995220 GCTATATACGGGATTTATTGTGACAAA 58.005 33.333 0.62 0.00 0.00 2.83
2000 4515 3.963428 GGAACTAGTCCTGAGAAAGCA 57.037 47.619 0.00 0.00 43.98 3.91
2001 4516 4.273148 GGAACTAGTCCTGAGAAAGCAA 57.727 45.455 0.00 0.00 43.98 3.91
2002 4517 3.997681 GGAACTAGTCCTGAGAAAGCAAC 59.002 47.826 0.00 0.00 43.98 4.17
2003 4518 4.503296 GGAACTAGTCCTGAGAAAGCAACA 60.503 45.833 0.00 0.00 43.98 3.33
2004 4519 4.689612 ACTAGTCCTGAGAAAGCAACAA 57.310 40.909 0.00 0.00 0.00 2.83
2005 4520 4.636249 ACTAGTCCTGAGAAAGCAACAAG 58.364 43.478 0.00 0.00 0.00 3.16
2006 4521 2.225467 AGTCCTGAGAAAGCAACAAGC 58.775 47.619 0.00 0.00 46.19 4.01
2018 4533 3.754188 GCAACAAGCATAGAGACCAAG 57.246 47.619 0.00 0.00 44.79 3.61
2019 4534 3.338249 GCAACAAGCATAGAGACCAAGA 58.662 45.455 0.00 0.00 44.79 3.02
2020 4535 3.373439 GCAACAAGCATAGAGACCAAGAG 59.627 47.826 0.00 0.00 44.79 2.85
2021 4536 4.825422 CAACAAGCATAGAGACCAAGAGA 58.175 43.478 0.00 0.00 0.00 3.10
2022 4537 4.464069 ACAAGCATAGAGACCAAGAGAC 57.536 45.455 0.00 0.00 0.00 3.36
2023 4538 3.834813 ACAAGCATAGAGACCAAGAGACA 59.165 43.478 0.00 0.00 0.00 3.41
2024 4539 4.180057 CAAGCATAGAGACCAAGAGACAC 58.820 47.826 0.00 0.00 0.00 3.67
2025 4540 3.435275 AGCATAGAGACCAAGAGACACA 58.565 45.455 0.00 0.00 0.00 3.72
2026 4541 3.834813 AGCATAGAGACCAAGAGACACAA 59.165 43.478 0.00 0.00 0.00 3.33
2027 4542 4.081752 AGCATAGAGACCAAGAGACACAAG 60.082 45.833 0.00 0.00 0.00 3.16
2028 4543 4.753233 CATAGAGACCAAGAGACACAAGG 58.247 47.826 0.00 0.00 0.00 3.61
2029 4544 1.346068 AGAGACCAAGAGACACAAGGC 59.654 52.381 0.00 0.00 0.00 4.35
2030 4545 1.346068 GAGACCAAGAGACACAAGGCT 59.654 52.381 0.00 0.00 0.00 4.58
2031 4546 2.563179 GAGACCAAGAGACACAAGGCTA 59.437 50.000 0.00 0.00 0.00 3.93
2032 4547 2.564947 AGACCAAGAGACACAAGGCTAG 59.435 50.000 0.00 0.00 0.00 3.42
2033 4548 1.625818 ACCAAGAGACACAAGGCTAGG 59.374 52.381 0.00 0.00 0.00 3.02
2034 4549 1.902508 CCAAGAGACACAAGGCTAGGA 59.097 52.381 0.00 0.00 0.00 2.94
2035 4550 2.303022 CCAAGAGACACAAGGCTAGGAA 59.697 50.000 0.00 0.00 0.00 3.36
2036 4551 3.244561 CCAAGAGACACAAGGCTAGGAAA 60.245 47.826 0.00 0.00 0.00 3.13
2037 4552 4.389374 CAAGAGACACAAGGCTAGGAAAA 58.611 43.478 0.00 0.00 0.00 2.29
2038 4553 4.278975 AGAGACACAAGGCTAGGAAAAG 57.721 45.455 0.00 0.00 0.00 2.27
2039 4554 3.904339 AGAGACACAAGGCTAGGAAAAGA 59.096 43.478 0.00 0.00 0.00 2.52
2040 4555 4.534103 AGAGACACAAGGCTAGGAAAAGAT 59.466 41.667 0.00 0.00 0.00 2.40
2041 4556 5.721960 AGAGACACAAGGCTAGGAAAAGATA 59.278 40.000 0.00 0.00 0.00 1.98
2042 4557 5.735766 AGACACAAGGCTAGGAAAAGATAC 58.264 41.667 0.00 0.00 0.00 2.24
2043 4558 4.504858 ACACAAGGCTAGGAAAAGATACG 58.495 43.478 0.00 0.00 0.00 3.06
2044 4559 3.871594 CACAAGGCTAGGAAAAGATACGG 59.128 47.826 0.00 0.00 0.00 4.02
2045 4560 2.872858 CAAGGCTAGGAAAAGATACGGC 59.127 50.000 0.00 0.00 0.00 5.68
2046 4561 2.116238 AGGCTAGGAAAAGATACGGCA 58.884 47.619 0.00 0.00 0.00 5.69
2047 4562 2.103263 AGGCTAGGAAAAGATACGGCAG 59.897 50.000 0.00 0.00 0.00 4.85
2048 4563 1.867865 GCTAGGAAAAGATACGGCAGC 59.132 52.381 0.00 0.00 0.00 5.25
2049 4564 2.741878 GCTAGGAAAAGATACGGCAGCA 60.742 50.000 0.00 0.00 0.00 4.41
2050 4565 2.717639 AGGAAAAGATACGGCAGCAT 57.282 45.000 0.00 0.00 0.00 3.79
2051 4566 2.292267 AGGAAAAGATACGGCAGCATG 58.708 47.619 0.00 0.00 40.87 4.06
2052 4567 2.017049 GGAAAAGATACGGCAGCATGT 58.983 47.619 0.00 0.00 39.31 3.21
2053 4568 3.118408 AGGAAAAGATACGGCAGCATGTA 60.118 43.478 0.00 0.00 39.31 2.29
2054 4569 3.815401 GGAAAAGATACGGCAGCATGTAT 59.185 43.478 8.80 8.80 39.31 2.29
2055 4570 4.319766 GGAAAAGATACGGCAGCATGTATG 60.320 45.833 12.82 0.00 39.31 2.39
2083 4598 4.969604 GCGTCGTCCGTCGTGTGT 62.970 66.667 8.00 0.00 40.80 3.72
2084 4599 3.089210 CGTCGTCCGTCGTGTGTG 61.089 66.667 0.00 0.00 40.80 3.82
2085 4600 3.392440 GTCGTCCGTCGTGTGTGC 61.392 66.667 0.00 0.00 40.80 4.57
2086 4601 3.890221 TCGTCCGTCGTGTGTGCA 61.890 61.111 0.00 0.00 40.80 4.57
2087 4602 2.733218 CGTCCGTCGTGTGTGCAT 60.733 61.111 0.00 0.00 34.52 3.96
2088 4603 2.853210 GTCCGTCGTGTGTGCATG 59.147 61.111 0.00 0.00 0.00 4.06
2089 4604 1.954146 GTCCGTCGTGTGTGCATGT 60.954 57.895 0.00 0.00 33.51 3.21
2090 4605 1.953642 TCCGTCGTGTGTGCATGTG 60.954 57.895 0.00 0.00 33.51 3.21
2091 4606 1.953642 CCGTCGTGTGTGCATGTGA 60.954 57.895 0.00 0.00 33.51 3.58
2092 4607 1.291184 CCGTCGTGTGTGCATGTGAT 61.291 55.000 0.00 0.00 33.51 3.06
2093 4608 0.512518 CGTCGTGTGTGCATGTGATT 59.487 50.000 0.00 0.00 33.51 2.57
2094 4609 1.722435 CGTCGTGTGTGCATGTGATTG 60.722 52.381 0.00 0.00 33.51 2.67
2095 4610 1.530720 GTCGTGTGTGCATGTGATTGA 59.469 47.619 0.00 0.00 33.51 2.57
2096 4611 2.160219 GTCGTGTGTGCATGTGATTGAT 59.840 45.455 0.00 0.00 33.51 2.57
2097 4612 2.813172 TCGTGTGTGCATGTGATTGATT 59.187 40.909 0.00 0.00 33.51 2.57
2098 4613 2.912345 CGTGTGTGCATGTGATTGATTG 59.088 45.455 0.00 0.00 0.00 2.67
2099 4614 3.365164 CGTGTGTGCATGTGATTGATTGA 60.365 43.478 0.00 0.00 0.00 2.57
2100 4615 4.548494 GTGTGTGCATGTGATTGATTGAA 58.452 39.130 0.00 0.00 0.00 2.69
2101 4616 5.165676 GTGTGTGCATGTGATTGATTGAAT 58.834 37.500 0.00 0.00 0.00 2.57
2102 4617 6.324042 GTGTGTGCATGTGATTGATTGAATA 58.676 36.000 0.00 0.00 0.00 1.75
2103 4618 6.976349 GTGTGTGCATGTGATTGATTGAATAT 59.024 34.615 0.00 0.00 0.00 1.28
2104 4619 7.490079 GTGTGTGCATGTGATTGATTGAATATT 59.510 33.333 0.00 0.00 0.00 1.28
2105 4620 8.035984 TGTGTGCATGTGATTGATTGAATATTT 58.964 29.630 0.00 0.00 0.00 1.40
2106 4621 8.325282 GTGTGCATGTGATTGATTGAATATTTG 58.675 33.333 0.00 0.00 0.00 2.32
2107 4622 8.251721 TGTGCATGTGATTGATTGAATATTTGA 58.748 29.630 0.00 0.00 0.00 2.69
2108 4623 9.256477 GTGCATGTGATTGATTGAATATTTGAT 57.744 29.630 0.00 0.00 0.00 2.57
2109 4624 9.825109 TGCATGTGATTGATTGAATATTTGATT 57.175 25.926 0.00 0.00 0.00 2.57
2138 4653 9.582431 TTCGAAATCACTAGTTAAGGAGTATTG 57.418 33.333 0.00 0.00 0.00 1.90
2139 4654 8.963725 TCGAAATCACTAGTTAAGGAGTATTGA 58.036 33.333 0.00 0.00 30.32 2.57
2140 4655 9.751542 CGAAATCACTAGTTAAGGAGTATTGAT 57.248 33.333 0.00 0.00 35.96 2.57
2160 4675 6.519679 TGATCATTTCAATTCTCCAGGTTG 57.480 37.500 0.00 0.00 0.00 3.77
2161 4676 4.789012 TCATTTCAATTCTCCAGGTTGC 57.211 40.909 0.00 0.00 0.00 4.17
2162 4677 4.151121 TCATTTCAATTCTCCAGGTTGCA 58.849 39.130 0.00 0.00 0.00 4.08
2163 4678 4.588106 TCATTTCAATTCTCCAGGTTGCAA 59.412 37.500 0.00 0.00 0.00 4.08
2164 4679 4.320608 TTTCAATTCTCCAGGTTGCAAC 57.679 40.909 21.59 21.59 0.00 4.17
2165 4680 2.942804 TCAATTCTCCAGGTTGCAACA 58.057 42.857 29.55 9.45 0.00 3.33
2166 4681 3.295093 TCAATTCTCCAGGTTGCAACAA 58.705 40.909 29.55 15.15 0.00 2.83
2167 4682 3.318839 TCAATTCTCCAGGTTGCAACAAG 59.681 43.478 29.55 20.28 0.00 3.16
2168 4683 2.435372 TTCTCCAGGTTGCAACAAGT 57.565 45.000 29.55 11.86 0.00 3.16
2169 4684 1.679139 TCTCCAGGTTGCAACAAGTG 58.321 50.000 29.55 21.64 0.00 3.16
2170 4685 0.670162 CTCCAGGTTGCAACAAGTGG 59.330 55.000 29.55 28.14 0.00 4.00
2171 4686 0.033601 TCCAGGTTGCAACAAGTGGT 60.034 50.000 29.51 10.07 31.44 4.16
2172 4687 0.102844 CCAGGTTGCAACAAGTGGTG 59.897 55.000 29.55 15.63 35.41 4.17
2181 4696 2.649516 CAACAAGTGGTGCGTTGTATG 58.350 47.619 0.00 0.00 35.83 2.39
2182 4697 1.961793 ACAAGTGGTGCGTTGTATGT 58.038 45.000 0.00 0.00 35.10 2.29
2183 4698 3.114668 ACAAGTGGTGCGTTGTATGTA 57.885 42.857 0.00 0.00 35.10 2.29
2184 4699 2.803956 ACAAGTGGTGCGTTGTATGTAC 59.196 45.455 0.00 0.00 35.10 2.90
2185 4700 1.705256 AGTGGTGCGTTGTATGTACG 58.295 50.000 0.00 0.00 41.71 3.67
2192 4707 2.780361 CGTTGTATGTACGCCACTTG 57.220 50.000 0.00 0.00 31.73 3.16
2193 4708 2.063266 CGTTGTATGTACGCCACTTGT 58.937 47.619 0.00 0.00 31.73 3.16
2194 4709 2.091588 CGTTGTATGTACGCCACTTGTC 59.908 50.000 0.00 0.00 31.73 3.18
2195 4710 1.985334 TGTATGTACGCCACTTGTCG 58.015 50.000 0.00 0.00 0.00 4.35
2196 4711 0.643820 GTATGTACGCCACTTGTCGC 59.356 55.000 0.00 0.00 0.00 5.19
2197 4712 0.244178 TATGTACGCCACTTGTCGCA 59.756 50.000 0.00 0.00 0.00 5.10
2198 4713 0.601576 ATGTACGCCACTTGTCGCAA 60.602 50.000 0.00 0.00 0.00 4.85
2199 4714 1.203313 GTACGCCACTTGTCGCAAC 59.797 57.895 0.00 0.00 0.00 4.17
2200 4715 1.957186 TACGCCACTTGTCGCAACC 60.957 57.895 0.00 0.00 0.00 3.77
2201 4716 2.372040 TACGCCACTTGTCGCAACCT 62.372 55.000 0.00 0.00 0.00 3.50
2202 4717 2.639286 GCCACTTGTCGCAACCTG 59.361 61.111 0.00 0.00 0.00 4.00
2203 4718 1.891919 GCCACTTGTCGCAACCTGA 60.892 57.895 0.00 0.00 0.00 3.86
2204 4719 1.845809 GCCACTTGTCGCAACCTGAG 61.846 60.000 0.00 0.00 0.00 3.35
2205 4720 0.249868 CCACTTGTCGCAACCTGAGA 60.250 55.000 0.00 0.00 0.00 3.27
2206 4721 1.143305 CACTTGTCGCAACCTGAGAG 58.857 55.000 0.00 0.00 0.00 3.20
2207 4722 0.753262 ACTTGTCGCAACCTGAGAGT 59.247 50.000 0.00 0.00 0.00 3.24
2208 4723 1.139058 ACTTGTCGCAACCTGAGAGTT 59.861 47.619 0.00 0.00 0.00 3.01
2209 4724 2.213499 CTTGTCGCAACCTGAGAGTTT 58.787 47.619 0.00 0.00 0.00 2.66
2210 4725 2.325583 TGTCGCAACCTGAGAGTTTT 57.674 45.000 0.00 0.00 0.00 2.43
2211 4726 2.210116 TGTCGCAACCTGAGAGTTTTC 58.790 47.619 0.00 0.00 0.00 2.29
2212 4727 1.531578 GTCGCAACCTGAGAGTTTTCC 59.468 52.381 0.00 0.00 0.00 3.13
2213 4728 0.875059 CGCAACCTGAGAGTTTTCCC 59.125 55.000 0.00 0.00 0.00 3.97
2214 4729 1.543429 CGCAACCTGAGAGTTTTCCCT 60.543 52.381 0.00 0.00 0.00 4.20
2215 4730 2.587522 GCAACCTGAGAGTTTTCCCTT 58.412 47.619 0.00 0.00 0.00 3.95
2216 4731 2.959030 GCAACCTGAGAGTTTTCCCTTT 59.041 45.455 0.00 0.00 0.00 3.11
2217 4732 3.384789 GCAACCTGAGAGTTTTCCCTTTT 59.615 43.478 0.00 0.00 0.00 2.27
2218 4733 4.141937 GCAACCTGAGAGTTTTCCCTTTTT 60.142 41.667 0.00 0.00 0.00 1.94
2260 4775 8.770850 TTCAAAACGTTTTATCTCTTAAACCG 57.229 30.769 24.79 8.91 40.37 4.44
2261 4776 7.918643 TCAAAACGTTTTATCTCTTAAACCGT 58.081 30.769 24.79 0.00 46.69 4.83
2262 4777 7.851963 TCAAAACGTTTTATCTCTTAAACCGTG 59.148 33.333 24.79 8.65 44.82 4.94
2263 4778 5.273523 ACGTTTTATCTCTTAAACCGTGC 57.726 39.130 0.86 0.00 44.18 5.34
2264 4779 4.143263 ACGTTTTATCTCTTAAACCGTGCG 60.143 41.667 0.86 0.00 44.18 5.34
2265 4780 4.143263 CGTTTTATCTCTTAAACCGTGCGT 60.143 41.667 0.00 0.00 32.79 5.24
2266 4781 5.311271 GTTTTATCTCTTAAACCGTGCGTC 58.689 41.667 0.00 0.00 29.47 5.19
2267 4782 2.005971 ATCTCTTAAACCGTGCGTCC 57.994 50.000 0.00 0.00 0.00 4.79
2268 4783 0.675083 TCTCTTAAACCGTGCGTCCA 59.325 50.000 0.00 0.00 0.00 4.02
2269 4784 1.068895 TCTCTTAAACCGTGCGTCCAA 59.931 47.619 0.00 0.00 0.00 3.53
2270 4785 1.868498 CTCTTAAACCGTGCGTCCAAA 59.132 47.619 0.00 0.00 0.00 3.28
2271 4786 2.482721 CTCTTAAACCGTGCGTCCAAAT 59.517 45.455 0.00 0.00 0.00 2.32
2272 4787 2.481185 TCTTAAACCGTGCGTCCAAATC 59.519 45.455 0.00 0.00 0.00 2.17
2273 4788 2.172851 TAAACCGTGCGTCCAAATCT 57.827 45.000 0.00 0.00 0.00 2.40
2274 4789 0.872388 AAACCGTGCGTCCAAATCTC 59.128 50.000 0.00 0.00 0.00 2.75
2275 4790 1.289109 AACCGTGCGTCCAAATCTCG 61.289 55.000 0.00 0.00 0.00 4.04
2276 4791 1.445410 CCGTGCGTCCAAATCTCGA 60.445 57.895 0.00 0.00 0.00 4.04
2277 4792 1.011968 CCGTGCGTCCAAATCTCGAA 61.012 55.000 0.00 0.00 0.00 3.71
2278 4793 0.093026 CGTGCGTCCAAATCTCGAAC 59.907 55.000 0.00 0.00 0.00 3.95
2279 4794 1.429463 GTGCGTCCAAATCTCGAACT 58.571 50.000 0.00 0.00 31.34 3.01
2280 4795 1.126846 GTGCGTCCAAATCTCGAACTG 59.873 52.381 0.00 0.00 31.34 3.16
2281 4796 0.095417 GCGTCCAAATCTCGAACTGC 59.905 55.000 0.00 0.00 0.00 4.40
2282 4797 1.714794 CGTCCAAATCTCGAACTGCT 58.285 50.000 0.00 0.00 0.00 4.24
2283 4798 2.069273 CGTCCAAATCTCGAACTGCTT 58.931 47.619 0.00 0.00 0.00 3.91
2284 4799 2.480419 CGTCCAAATCTCGAACTGCTTT 59.520 45.455 0.00 0.00 0.00 3.51
2285 4800 3.423645 CGTCCAAATCTCGAACTGCTTTC 60.424 47.826 0.00 0.00 0.00 2.62
2292 4807 4.515107 GAACTGCTTTCGCCGTTG 57.485 55.556 0.00 0.00 42.50 4.10
2293 4808 1.082104 GAACTGCTTTCGCCGTTGG 60.082 57.895 0.00 0.00 42.50 3.77
2294 4809 1.503818 GAACTGCTTTCGCCGTTGGA 61.504 55.000 0.00 0.00 42.50 3.53
2295 4810 0.889186 AACTGCTTTCGCCGTTGGAT 60.889 50.000 0.00 0.00 41.20 3.41
2296 4811 0.889186 ACTGCTTTCGCCGTTGGATT 60.889 50.000 0.00 0.00 28.52 3.01
2297 4812 0.179189 CTGCTTTCGCCGTTGGATTC 60.179 55.000 0.00 0.00 34.43 2.52
2298 4813 1.136774 GCTTTCGCCGTTGGATTCC 59.863 57.895 0.00 0.00 0.00 3.01
2299 4814 1.305930 GCTTTCGCCGTTGGATTCCT 61.306 55.000 3.95 0.00 0.00 3.36
2300 4815 0.727398 CTTTCGCCGTTGGATTCCTC 59.273 55.000 3.95 0.00 0.00 3.71
2301 4816 0.323629 TTTCGCCGTTGGATTCCTCT 59.676 50.000 3.95 0.00 0.00 3.69
2302 4817 0.323629 TTCGCCGTTGGATTCCTCTT 59.676 50.000 3.95 0.00 0.00 2.85
2303 4818 0.391130 TCGCCGTTGGATTCCTCTTG 60.391 55.000 3.95 0.00 0.00 3.02
2304 4819 0.673644 CGCCGTTGGATTCCTCTTGT 60.674 55.000 3.95 0.00 0.00 3.16
2305 4820 1.087501 GCCGTTGGATTCCTCTTGTC 58.912 55.000 3.95 0.00 0.00 3.18
2306 4821 1.359848 CCGTTGGATTCCTCTTGTCG 58.640 55.000 3.95 0.60 0.00 4.35
2307 4822 1.067142 CCGTTGGATTCCTCTTGTCGA 60.067 52.381 3.95 0.00 0.00 4.20
2308 4823 2.263077 CGTTGGATTCCTCTTGTCGAG 58.737 52.381 3.95 0.00 39.57 4.04
2309 4824 2.094700 CGTTGGATTCCTCTTGTCGAGA 60.095 50.000 3.95 0.00 42.62 4.04
2310 4825 3.429547 CGTTGGATTCCTCTTGTCGAGAT 60.430 47.826 3.95 0.00 42.62 2.75
2311 4826 4.116238 GTTGGATTCCTCTTGTCGAGATC 58.884 47.826 3.95 0.00 42.62 2.75
2312 4827 3.636679 TGGATTCCTCTTGTCGAGATCT 58.363 45.455 3.95 0.00 42.62 2.75
2313 4828 4.026744 TGGATTCCTCTTGTCGAGATCTT 58.973 43.478 3.95 0.00 42.62 2.40
2314 4829 4.098654 TGGATTCCTCTTGTCGAGATCTTC 59.901 45.833 3.95 0.00 42.62 2.87
2315 4830 4.098654 GGATTCCTCTTGTCGAGATCTTCA 59.901 45.833 0.00 0.00 42.62 3.02
2316 4831 5.394663 GGATTCCTCTTGTCGAGATCTTCAA 60.395 44.000 0.00 2.97 42.62 2.69
2317 4832 5.468540 TTCCTCTTGTCGAGATCTTCAAA 57.531 39.130 0.00 0.00 42.62 2.69
2318 4833 5.468540 TCCTCTTGTCGAGATCTTCAAAA 57.531 39.130 0.00 0.00 42.62 2.44
2319 4834 5.230942 TCCTCTTGTCGAGATCTTCAAAAC 58.769 41.667 0.00 0.00 42.62 2.43
2320 4835 5.011125 TCCTCTTGTCGAGATCTTCAAAACT 59.989 40.000 0.00 0.00 42.62 2.66
2321 4836 6.208797 TCCTCTTGTCGAGATCTTCAAAACTA 59.791 38.462 0.00 0.00 42.62 2.24
2322 4837 6.529829 CCTCTTGTCGAGATCTTCAAAACTAG 59.470 42.308 0.00 0.00 42.62 2.57
2323 4838 7.215719 TCTTGTCGAGATCTTCAAAACTAGA 57.784 36.000 0.00 1.08 0.00 2.43
2324 4839 7.831753 TCTTGTCGAGATCTTCAAAACTAGAT 58.168 34.615 0.00 0.00 0.00 1.98
2325 4840 7.971168 TCTTGTCGAGATCTTCAAAACTAGATC 59.029 37.037 0.00 0.00 37.89 2.75
2326 4841 6.565234 TGTCGAGATCTTCAAAACTAGATCC 58.435 40.000 0.00 1.33 38.24 3.36
2327 4842 5.980715 GTCGAGATCTTCAAAACTAGATCCC 59.019 44.000 0.00 0.00 38.24 3.85
2328 4843 5.656859 TCGAGATCTTCAAAACTAGATCCCA 59.343 40.000 0.00 0.00 38.24 4.37
2329 4844 6.325028 TCGAGATCTTCAAAACTAGATCCCAT 59.675 38.462 0.00 0.00 38.24 4.00
2330 4845 7.505923 TCGAGATCTTCAAAACTAGATCCCATA 59.494 37.037 0.00 0.00 38.24 2.74
2331 4846 8.310382 CGAGATCTTCAAAACTAGATCCCATAT 58.690 37.037 0.00 0.00 38.24 1.78
2333 4848 9.790344 AGATCTTCAAAACTAGATCCCATATTG 57.210 33.333 0.00 0.00 38.24 1.90
2334 4849 9.784531 GATCTTCAAAACTAGATCCCATATTGA 57.215 33.333 0.00 0.00 33.15 2.57
2339 4854 9.170890 TCAAAACTAGATCCCATATTGATAGGT 57.829 33.333 0.00 0.00 0.00 3.08
2340 4855 9.799106 CAAAACTAGATCCCATATTGATAGGTT 57.201 33.333 0.00 0.00 0.00 3.50
2343 4858 9.799106 AACTAGATCCCATATTGATAGGTTTTG 57.201 33.333 0.00 0.00 0.00 2.44
2344 4859 9.170890 ACTAGATCCCATATTGATAGGTTTTGA 57.829 33.333 0.00 0.00 0.00 2.69
2345 4860 9.442047 CTAGATCCCATATTGATAGGTTTTGAC 57.558 37.037 0.00 0.00 0.00 3.18
2346 4861 6.936900 AGATCCCATATTGATAGGTTTTGACG 59.063 38.462 0.00 0.00 0.00 4.35
2347 4862 6.241882 TCCCATATTGATAGGTTTTGACGA 57.758 37.500 0.00 0.00 0.00 4.20
2348 4863 6.654959 TCCCATATTGATAGGTTTTGACGAA 58.345 36.000 0.00 0.00 0.00 3.85
2349 4864 6.540914 TCCCATATTGATAGGTTTTGACGAAC 59.459 38.462 0.00 0.00 0.00 3.95
2350 4865 6.317642 CCCATATTGATAGGTTTTGACGAACA 59.682 38.462 0.00 0.00 0.00 3.18
2351 4866 7.186804 CCATATTGATAGGTTTTGACGAACAC 58.813 38.462 0.00 0.00 0.00 3.32
2352 4867 7.148323 CCATATTGATAGGTTTTGACGAACACA 60.148 37.037 0.00 0.00 0.00 3.72
2353 4868 6.817765 ATTGATAGGTTTTGACGAACACAT 57.182 33.333 0.00 0.00 0.00 3.21
2354 4869 6.627395 TTGATAGGTTTTGACGAACACATT 57.373 33.333 0.00 0.00 0.00 2.71
2355 4870 6.627395 TGATAGGTTTTGACGAACACATTT 57.373 33.333 0.00 0.00 0.00 2.32
2356 4871 7.033530 TGATAGGTTTTGACGAACACATTTT 57.966 32.000 0.00 0.00 0.00 1.82
2357 4872 7.484975 TGATAGGTTTTGACGAACACATTTTT 58.515 30.769 0.00 0.00 0.00 1.94
2375 4890 3.736530 TTTTTCACGAAAAACGGACGA 57.263 38.095 12.48 0.00 43.08 4.20
2376 4891 4.075763 TTTTTCACGAAAAACGGACGAA 57.924 36.364 12.48 0.00 43.08 3.85
2377 4892 4.470462 TTTTTCACGAAAAACGGACGAAA 58.530 34.783 12.48 0.00 43.08 3.46
2378 4893 4.913924 TTTTTCACGAAAAACGGACGAAAA 59.086 33.333 12.48 0.00 43.08 2.29
2379 4894 5.400485 TTTTTCACGAAAAACGGACGAAAAA 59.600 32.000 12.48 16.61 45.01 1.94
2396 4911 1.308998 AAAACTGAACCAGGAGCACG 58.691 50.000 0.00 0.00 35.51 5.34
2397 4912 0.535102 AAACTGAACCAGGAGCACGG 60.535 55.000 0.00 0.00 35.51 4.94
2398 4913 2.046892 CTGAACCAGGAGCACGGG 60.047 66.667 0.00 0.00 40.66 5.28
2402 4917 2.430367 ACCAGGAGCACGGGTTTC 59.570 61.111 0.00 0.00 46.05 2.78
2403 4918 2.359975 CCAGGAGCACGGGTTTCC 60.360 66.667 2.48 2.48 0.00 3.13
2404 4919 2.359975 CAGGAGCACGGGTTTCCC 60.360 66.667 6.72 0.00 41.09 3.97
2405 4920 2.529389 AGGAGCACGGGTTTCCCT 60.529 61.111 6.72 0.00 42.67 4.20
2406 4921 2.154074 AGGAGCACGGGTTTCCCTT 61.154 57.895 6.72 0.00 42.67 3.95
2407 4922 1.228459 GGAGCACGGGTTTCCCTTT 60.228 57.895 3.25 0.00 42.67 3.11
2408 4923 1.241990 GGAGCACGGGTTTCCCTTTC 61.242 60.000 3.25 0.00 42.67 2.62
2409 4924 1.228459 AGCACGGGTTTCCCTTTCC 60.228 57.895 3.25 0.00 42.67 3.13
2410 4925 2.622962 GCACGGGTTTCCCTTTCCG 61.623 63.158 3.25 0.00 42.67 4.30
2411 4926 1.071814 CACGGGTTTCCCTTTCCGA 59.928 57.895 7.63 0.00 44.69 4.55
2412 4927 0.535553 CACGGGTTTCCCTTTCCGAA 60.536 55.000 7.63 0.00 44.69 4.30
2413 4928 0.183252 ACGGGTTTCCCTTTCCGAAA 59.817 50.000 7.63 0.00 44.69 3.46
2414 4929 0.879090 CGGGTTTCCCTTTCCGAAAG 59.121 55.000 13.16 13.16 44.69 2.62
2415 4930 1.543871 CGGGTTTCCCTTTCCGAAAGA 60.544 52.381 20.43 0.95 44.69 2.52
2416 4931 2.160205 GGGTTTCCCTTTCCGAAAGAG 58.840 52.381 20.43 9.08 41.34 2.85
2417 4932 2.160205 GGTTTCCCTTTCCGAAAGAGG 58.840 52.381 20.43 18.19 41.02 3.69
2418 4933 1.540267 GTTTCCCTTTCCGAAAGAGGC 59.460 52.381 20.43 5.86 41.02 4.70
2419 4934 0.768622 TTCCCTTTCCGAAAGAGGCA 59.231 50.000 20.43 8.95 41.02 4.75
2420 4935 0.036306 TCCCTTTCCGAAAGAGGCAC 59.964 55.000 20.43 0.00 41.02 5.01
2421 4936 1.298859 CCCTTTCCGAAAGAGGCACG 61.299 60.000 20.43 4.41 41.02 5.34
2422 4937 1.497722 CTTTCCGAAAGAGGCACGC 59.502 57.895 14.72 0.00 41.02 5.34
2423 4938 1.912371 CTTTCCGAAAGAGGCACGCC 61.912 60.000 14.72 0.00 41.02 5.68
2424 4939 3.894547 TTCCGAAAGAGGCACGCCC 62.895 63.158 3.95 0.00 36.58 6.13
2425 4940 4.697756 CCGAAAGAGGCACGCCCA 62.698 66.667 3.95 0.00 36.58 5.36
2426 4941 2.436646 CGAAAGAGGCACGCCCAT 60.437 61.111 3.95 0.00 36.58 4.00
2427 4942 2.753966 CGAAAGAGGCACGCCCATG 61.754 63.158 3.95 0.00 36.58 3.66
2428 4943 3.056313 GAAAGAGGCACGCCCATGC 62.056 63.158 3.95 0.00 45.34 4.06
2434 4949 4.783621 GCACGCCCATGCCTCTGA 62.784 66.667 0.00 0.00 39.86 3.27
2435 4950 2.191375 CACGCCCATGCCTCTGAT 59.809 61.111 0.00 0.00 0.00 2.90
2436 4951 2.184830 CACGCCCATGCCTCTGATG 61.185 63.158 0.00 0.00 0.00 3.07
2437 4952 2.369633 ACGCCCATGCCTCTGATGA 61.370 57.895 0.00 0.00 0.00 2.92
2438 4953 1.153107 CGCCCATGCCTCTGATGAA 60.153 57.895 0.00 0.00 0.00 2.57
2439 4954 0.749091 CGCCCATGCCTCTGATGAAA 60.749 55.000 0.00 0.00 0.00 2.69
2440 4955 1.700955 GCCCATGCCTCTGATGAAAT 58.299 50.000 0.00 0.00 0.00 2.17
2441 4956 1.612463 GCCCATGCCTCTGATGAAATC 59.388 52.381 0.00 0.00 45.83 2.17
2452 4967 2.262572 GATGAAATCACAACCGTGCC 57.737 50.000 0.00 0.00 44.70 5.01
2453 4968 1.812571 GATGAAATCACAACCGTGCCT 59.187 47.619 0.00 0.00 44.70 4.75
2454 4969 1.686355 TGAAATCACAACCGTGCCTT 58.314 45.000 0.00 0.00 43.28 4.35
2455 4970 2.028130 TGAAATCACAACCGTGCCTTT 58.972 42.857 0.00 0.00 43.28 3.11
2456 4971 2.034053 TGAAATCACAACCGTGCCTTTC 59.966 45.455 10.78 10.78 43.28 2.62
2457 4972 0.591170 AATCACAACCGTGCCTTTCG 59.409 50.000 0.00 0.00 43.28 3.46
2458 4973 1.852067 ATCACAACCGTGCCTTTCGC 61.852 55.000 0.00 0.00 43.28 4.70
2477 4992 2.510615 CGGAAGCAAAATCGTGACTC 57.489 50.000 0.00 0.00 0.00 3.36
2478 4993 2.069273 CGGAAGCAAAATCGTGACTCT 58.931 47.619 0.00 0.00 0.00 3.24
2479 4994 2.480419 CGGAAGCAAAATCGTGACTCTT 59.520 45.455 0.00 0.00 0.00 2.85
2480 4995 3.665323 CGGAAGCAAAATCGTGACTCTTG 60.665 47.826 0.00 0.00 0.00 3.02
2481 4996 2.977405 AGCAAAATCGTGACTCTTGC 57.023 45.000 0.00 0.00 42.10 4.01
2482 4997 1.195448 AGCAAAATCGTGACTCTTGCG 59.805 47.619 0.00 0.00 45.46 4.85
2483 4998 1.194547 GCAAAATCGTGACTCTTGCGA 59.805 47.619 0.00 0.00 39.02 5.10
2484 4999 2.349438 GCAAAATCGTGACTCTTGCGAA 60.349 45.455 0.00 0.00 38.17 4.70
2485 5000 3.848191 GCAAAATCGTGACTCTTGCGAAA 60.848 43.478 0.00 0.00 38.17 3.46
2486 5001 3.795561 AAATCGTGACTCTTGCGAAAG 57.204 42.857 0.00 0.00 38.17 2.62
2487 5002 2.724977 ATCGTGACTCTTGCGAAAGA 57.275 45.000 5.53 5.53 38.17 2.52
2488 5003 2.502213 TCGTGACTCTTGCGAAAGAA 57.498 45.000 7.40 0.00 0.00 2.52
2489 5004 2.816689 TCGTGACTCTTGCGAAAGAAA 58.183 42.857 7.40 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 90 3.623060 TGACAAAGATTAATCAGGCGCTC 59.377 43.478 17.56 0.00 0.00 5.03
105 107 9.411189 TCATCTGGATTGATTATCAAATGACAA 57.589 29.630 11.88 0.00 40.12 3.18
107 109 9.064706 AGTCATCTGGATTGATTATCAAATGAC 57.935 33.333 26.19 26.19 40.12 3.06
235 2399 4.153411 AGGGTTATGCTAGCTAGTACCTG 58.847 47.826 21.62 0.00 0.00 4.00
236 2400 4.409187 GAGGGTTATGCTAGCTAGTACCT 58.591 47.826 21.62 18.33 0.00 3.08
237 2401 3.190953 CGAGGGTTATGCTAGCTAGTACC 59.809 52.174 21.62 20.35 0.00 3.34
238 2402 3.190953 CCGAGGGTTATGCTAGCTAGTAC 59.809 52.174 21.62 13.81 0.00 2.73
239 2403 3.181436 ACCGAGGGTTATGCTAGCTAGTA 60.181 47.826 21.62 18.12 27.29 1.82
240 2404 2.240279 CCGAGGGTTATGCTAGCTAGT 58.760 52.381 21.62 5.88 0.00 2.57
241 2405 2.029828 CACCGAGGGTTATGCTAGCTAG 60.030 54.545 16.84 16.84 31.02 3.42
245 2409 1.269102 CGACACCGAGGGTTATGCTAG 60.269 57.143 0.00 0.00 38.22 3.42
309 2473 5.994054 CAGATTGGTAGTGGAGTCCATAATG 59.006 44.000 16.67 1.21 35.28 1.90
371 2539 5.105106 TCCTCGAAGAACACTATTTGCCATA 60.105 40.000 0.00 0.00 34.09 2.74
382 2550 1.734465 CTTGCCATCCTCGAAGAACAC 59.266 52.381 0.00 0.00 34.09 3.32
403 2571 4.662468 TTGACATGCTTGCCAACTAAAA 57.338 36.364 0.00 0.00 0.00 1.52
521 2694 6.925610 TGATGTTAGAAATGTAGGCATGAC 57.074 37.500 0.00 0.00 35.15 3.06
561 2734 6.701400 GCGCAATGGACAAGGAAATAATAATT 59.299 34.615 0.30 0.00 0.00 1.40
902 3324 1.389106 GAACTGTTTGGCGTAGTAGCG 59.611 52.381 0.00 0.00 38.18 4.26
936 3358 1.298863 GATGTGGATGCGTGCATGC 60.299 57.895 24.20 24.20 43.65 4.06
951 3373 6.009589 TGTTGTATTTATAGCCATGGGGATG 58.990 40.000 15.13 0.00 35.59 3.51
958 3380 7.071196 TGGAGAGAGTGTTGTATTTATAGCCAT 59.929 37.037 0.00 0.00 0.00 4.40
989 3411 1.273327 CTTTGGGTTTGGGATGCAGAC 59.727 52.381 0.00 0.00 0.00 3.51
1154 3595 2.968156 CGGCGGAACAACAACGGA 60.968 61.111 0.00 0.00 0.00 4.69
1172 3613 1.378250 CTCCTCCTCCGTGGTACGT 60.378 63.158 0.00 0.00 40.58 3.57
1479 3928 0.171007 GCCCGTACGTGCAGTAGTAA 59.829 55.000 18.04 0.00 35.72 2.24
1565 4050 3.170991 ACAAGAGGAGTAGCACTGGTA 57.829 47.619 0.00 0.00 0.00 3.25
1572 4075 2.884639 TGCCAAAAACAAGAGGAGTAGC 59.115 45.455 0.00 0.00 0.00 3.58
1581 4084 4.155644 ACATGGTTGTTTGCCAAAAACAAG 59.844 37.500 14.75 7.55 46.77 3.16
1666 4174 9.604626 GATCATACTTGTGTTTCAGAAAGAAAG 57.395 33.333 0.00 3.61 46.34 2.62
1713 4228 3.250744 GAAGAAGCTACGTGTGTATGCA 58.749 45.455 0.00 0.00 31.35 3.96
1714 4229 2.279136 CGAAGAAGCTACGTGTGTATGC 59.721 50.000 0.00 0.00 0.00 3.14
1718 4233 2.503920 AACGAAGAAGCTACGTGTGT 57.496 45.000 0.00 0.00 40.10 3.72
1719 4234 3.854286 AAAACGAAGAAGCTACGTGTG 57.146 42.857 0.00 0.00 40.10 3.82
1720 4235 5.284079 TCTAAAAACGAAGAAGCTACGTGT 58.716 37.500 0.00 1.83 40.10 4.49
1721 4236 5.817616 TCTAAAAACGAAGAAGCTACGTG 57.182 39.130 0.00 0.00 40.10 4.49
1722 4237 5.981915 AGTTCTAAAAACGAAGAAGCTACGT 59.018 36.000 0.00 0.00 41.97 3.57
1723 4238 6.449448 AGTTCTAAAAACGAAGAAGCTACG 57.551 37.500 0.00 0.00 32.56 3.51
1741 4256 6.027025 TGGGGTGTCATCTACTATAGTTCT 57.973 41.667 11.40 0.00 0.00 3.01
1742 4257 6.071278 GGATGGGGTGTCATCTACTATAGTTC 60.071 46.154 11.40 0.00 42.22 3.01
1745 4260 4.399618 CGGATGGGGTGTCATCTACTATAG 59.600 50.000 0.00 0.00 42.22 1.31
1746 4261 4.202641 ACGGATGGGGTGTCATCTACTATA 60.203 45.833 5.07 0.00 42.22 1.31
1747 4262 3.165875 CGGATGGGGTGTCATCTACTAT 58.834 50.000 5.07 0.00 42.22 2.12
1748 4263 2.091499 ACGGATGGGGTGTCATCTACTA 60.091 50.000 5.07 0.00 42.22 1.82
1749 4264 1.343075 ACGGATGGGGTGTCATCTACT 60.343 52.381 5.07 0.00 42.22 2.57
1750 4265 1.120530 ACGGATGGGGTGTCATCTAC 58.879 55.000 5.07 0.00 42.22 2.59
1751 4266 1.484653 CAACGGATGGGGTGTCATCTA 59.515 52.381 5.07 0.00 42.22 1.98
1752 4267 0.253044 CAACGGATGGGGTGTCATCT 59.747 55.000 5.07 0.00 42.22 2.90
1758 4273 3.443045 GCAGCAACGGATGGGGTG 61.443 66.667 0.00 0.00 0.00 4.61
1776 4291 5.600898 ACATATTTGTTTTAGTATGGCCCCC 59.399 40.000 0.00 0.00 29.55 5.40
1836 4351 9.765795 GGCAAGTAGATGTAAACAGATAACTAT 57.234 33.333 0.00 0.00 0.00 2.12
1837 4352 7.919091 CGGCAAGTAGATGTAAACAGATAACTA 59.081 37.037 0.00 0.00 0.00 2.24
1838 4353 6.757010 CGGCAAGTAGATGTAAACAGATAACT 59.243 38.462 0.00 0.00 0.00 2.24
1839 4354 6.509677 GCGGCAAGTAGATGTAAACAGATAAC 60.510 42.308 0.00 0.00 0.00 1.89
1840 4355 5.522460 GCGGCAAGTAGATGTAAACAGATAA 59.478 40.000 0.00 0.00 0.00 1.75
1841 4356 5.047847 GCGGCAAGTAGATGTAAACAGATA 58.952 41.667 0.00 0.00 0.00 1.98
1842 4357 3.871594 GCGGCAAGTAGATGTAAACAGAT 59.128 43.478 0.00 0.00 0.00 2.90
1843 4358 3.259064 GCGGCAAGTAGATGTAAACAGA 58.741 45.455 0.00 0.00 0.00 3.41
1844 4359 3.000041 TGCGGCAAGTAGATGTAAACAG 59.000 45.455 0.00 0.00 0.00 3.16
1845 4360 3.046968 TGCGGCAAGTAGATGTAAACA 57.953 42.857 0.00 0.00 0.00 2.83
1846 4361 4.156182 GTTTGCGGCAAGTAGATGTAAAC 58.844 43.478 15.78 3.44 0.00 2.01
1847 4362 3.120477 CGTTTGCGGCAAGTAGATGTAAA 60.120 43.478 15.78 0.00 0.00 2.01
1848 4363 2.413796 CGTTTGCGGCAAGTAGATGTAA 59.586 45.455 15.78 0.00 0.00 2.41
1849 4364 1.996898 CGTTTGCGGCAAGTAGATGTA 59.003 47.619 15.78 0.00 0.00 2.29
1850 4365 0.796312 CGTTTGCGGCAAGTAGATGT 59.204 50.000 15.78 0.00 0.00 3.06
1851 4366 3.586039 CGTTTGCGGCAAGTAGATG 57.414 52.632 15.78 2.80 0.00 2.90
1863 4378 3.857109 ATGTTTGCCGCCCGTTTGC 62.857 57.895 0.00 0.00 0.00 3.68
1864 4379 2.021039 CATGTTTGCCGCCCGTTTG 61.021 57.895 0.00 0.00 0.00 2.93
1865 4380 2.338257 CATGTTTGCCGCCCGTTT 59.662 55.556 0.00 0.00 0.00 3.60
1866 4381 3.679738 CCATGTTTGCCGCCCGTT 61.680 61.111 0.00 0.00 0.00 4.44
1870 4385 4.481112 CTCGCCATGTTTGCCGCC 62.481 66.667 0.00 0.00 0.00 6.13
1871 4386 3.430862 TCTCGCCATGTTTGCCGC 61.431 61.111 0.00 0.00 0.00 6.53
1872 4387 2.480555 GTCTCGCCATGTTTGCCG 59.519 61.111 0.00 0.00 0.00 5.69
1873 4388 1.971167 TGGTCTCGCCATGTTTGCC 60.971 57.895 0.00 0.00 43.61 4.52
1874 4389 3.667087 TGGTCTCGCCATGTTTGC 58.333 55.556 0.00 0.00 43.61 3.68
1896 4411 2.750637 CTCAGCCAGCCAAGCCTG 60.751 66.667 0.00 0.00 0.00 4.85
1897 4412 2.838467 AACTCAGCCAGCCAAGCCT 61.838 57.895 0.00 0.00 0.00 4.58
1898 4413 2.282745 AACTCAGCCAGCCAAGCC 60.283 61.111 0.00 0.00 0.00 4.35
1899 4414 1.900498 ACAACTCAGCCAGCCAAGC 60.900 57.895 0.00 0.00 0.00 4.01
1900 4415 1.954528 CACAACTCAGCCAGCCAAG 59.045 57.895 0.00 0.00 0.00 3.61
1901 4416 2.195567 GCACAACTCAGCCAGCCAA 61.196 57.895 0.00 0.00 0.00 4.52
1902 4417 2.595463 GCACAACTCAGCCAGCCA 60.595 61.111 0.00 0.00 0.00 4.75
1903 4418 1.530013 ATTGCACAACTCAGCCAGCC 61.530 55.000 0.00 0.00 0.00 4.85
1904 4419 0.388134 CATTGCACAACTCAGCCAGC 60.388 55.000 0.00 0.00 0.00 4.85
1905 4420 0.242825 CCATTGCACAACTCAGCCAG 59.757 55.000 0.00 0.00 0.00 4.85
1906 4421 1.808531 GCCATTGCACAACTCAGCCA 61.809 55.000 0.00 0.00 37.47 4.75
1907 4422 1.080298 GCCATTGCACAACTCAGCC 60.080 57.895 0.00 0.00 37.47 4.85
1908 4423 1.080298 GGCCATTGCACAACTCAGC 60.080 57.895 0.00 0.00 40.13 4.26
1909 4424 0.038892 GTGGCCATTGCACAACTCAG 60.039 55.000 9.72 0.00 40.13 3.35
1910 4425 0.754587 TGTGGCCATTGCACAACTCA 60.755 50.000 9.72 0.00 40.13 3.41
1911 4426 0.604578 ATGTGGCCATTGCACAACTC 59.395 50.000 9.72 0.00 40.13 3.01
1912 4427 0.319083 CATGTGGCCATTGCACAACT 59.681 50.000 9.72 0.00 40.13 3.16
1913 4428 1.293267 GCATGTGGCCATTGCACAAC 61.293 55.000 28.90 8.51 40.13 3.32
1914 4429 1.004799 GCATGTGGCCATTGCACAA 60.005 52.632 28.90 4.70 40.13 3.33
1915 4430 1.545706 ATGCATGTGGCCATTGCACA 61.546 50.000 35.01 21.34 43.89 4.57
1916 4431 0.460722 TATGCATGTGGCCATTGCAC 59.539 50.000 35.01 14.75 43.89 4.57
1917 4432 1.069358 CATATGCATGTGGCCATTGCA 59.931 47.619 34.61 34.61 43.89 4.08
1918 4433 1.606994 CCATATGCATGTGGCCATTGC 60.607 52.381 27.02 27.80 43.89 3.56
1919 4434 1.689813 ACCATATGCATGTGGCCATTG 59.310 47.619 34.82 15.84 42.18 2.82
1920 4435 1.689813 CACCATATGCATGTGGCCATT 59.310 47.619 34.82 17.87 42.18 3.16
1921 4436 1.334160 CACCATATGCATGTGGCCAT 58.666 50.000 34.82 18.21 42.18 4.40
1922 4437 2.809952 CACCATATGCATGTGGCCA 58.190 52.632 34.82 0.00 42.18 5.36
1932 4447 4.290969 CCGTATATAGCTCGCACCATATG 58.709 47.826 0.00 0.00 0.00 1.78
1933 4448 3.318275 CCCGTATATAGCTCGCACCATAT 59.682 47.826 0.00 0.00 0.00 1.78
1934 4449 2.686405 CCCGTATATAGCTCGCACCATA 59.314 50.000 0.00 0.00 0.00 2.74
1935 4450 1.476891 CCCGTATATAGCTCGCACCAT 59.523 52.381 0.00 0.00 0.00 3.55
1936 4451 0.885879 CCCGTATATAGCTCGCACCA 59.114 55.000 0.00 0.00 0.00 4.17
1937 4452 1.171308 TCCCGTATATAGCTCGCACC 58.829 55.000 0.00 0.00 0.00 5.01
1938 4453 3.505464 AATCCCGTATATAGCTCGCAC 57.495 47.619 0.00 0.00 0.00 5.34
1939 4454 5.847111 ATAAATCCCGTATATAGCTCGCA 57.153 39.130 0.00 0.00 0.00 5.10
1940 4455 6.019801 CACAATAAATCCCGTATATAGCTCGC 60.020 42.308 0.00 0.00 0.00 5.03
1941 4456 7.220300 GTCACAATAAATCCCGTATATAGCTCG 59.780 40.741 0.00 0.00 0.00 5.03
1942 4457 8.033038 TGTCACAATAAATCCCGTATATAGCTC 58.967 37.037 0.00 0.00 0.00 4.09
1943 4458 7.903145 TGTCACAATAAATCCCGTATATAGCT 58.097 34.615 0.00 0.00 0.00 3.32
1944 4459 8.542497 TTGTCACAATAAATCCCGTATATAGC 57.458 34.615 0.00 0.00 0.00 2.97
1980 4495 3.963428 TGCTTTCTCAGGACTAGTTCC 57.037 47.619 0.00 0.00 46.33 3.62
1981 4496 4.632153 TGTTGCTTTCTCAGGACTAGTTC 58.368 43.478 0.00 0.00 0.00 3.01
1982 4497 4.689612 TGTTGCTTTCTCAGGACTAGTT 57.310 40.909 0.00 0.00 0.00 2.24
1983 4498 4.636249 CTTGTTGCTTTCTCAGGACTAGT 58.364 43.478 0.00 0.00 0.00 2.57
1984 4499 3.434984 GCTTGTTGCTTTCTCAGGACTAG 59.565 47.826 0.00 0.00 38.95 2.57
1985 4500 3.181455 TGCTTGTTGCTTTCTCAGGACTA 60.181 43.478 0.00 0.00 43.37 2.59
1986 4501 2.225467 GCTTGTTGCTTTCTCAGGACT 58.775 47.619 0.00 0.00 38.95 3.85
1987 4502 1.949525 TGCTTGTTGCTTTCTCAGGAC 59.050 47.619 0.00 0.00 43.37 3.85
1988 4503 2.346766 TGCTTGTTGCTTTCTCAGGA 57.653 45.000 0.00 0.00 43.37 3.86
1989 4504 4.005650 TCTATGCTTGTTGCTTTCTCAGG 58.994 43.478 0.00 0.00 43.37 3.86
1990 4505 4.934001 TCTCTATGCTTGTTGCTTTCTCAG 59.066 41.667 0.00 0.00 43.37 3.35
1991 4506 4.692625 GTCTCTATGCTTGTTGCTTTCTCA 59.307 41.667 0.00 0.00 43.37 3.27
1992 4507 4.094146 GGTCTCTATGCTTGTTGCTTTCTC 59.906 45.833 0.00 0.00 43.37 2.87
1993 4508 4.006319 GGTCTCTATGCTTGTTGCTTTCT 58.994 43.478 0.00 0.00 43.37 2.52
1994 4509 3.753272 TGGTCTCTATGCTTGTTGCTTTC 59.247 43.478 0.00 0.00 43.37 2.62
1995 4510 3.754965 TGGTCTCTATGCTTGTTGCTTT 58.245 40.909 0.00 0.00 43.37 3.51
1996 4511 3.423539 TGGTCTCTATGCTTGTTGCTT 57.576 42.857 0.00 0.00 43.37 3.91
1997 4512 3.008375 TCTTGGTCTCTATGCTTGTTGCT 59.992 43.478 0.00 0.00 43.37 3.91
1998 4513 3.338249 TCTTGGTCTCTATGCTTGTTGC 58.662 45.455 0.00 0.00 43.25 4.17
1999 4514 4.629200 GTCTCTTGGTCTCTATGCTTGTTG 59.371 45.833 0.00 0.00 0.00 3.33
2000 4515 4.284490 TGTCTCTTGGTCTCTATGCTTGTT 59.716 41.667 0.00 0.00 0.00 2.83
2001 4516 3.834813 TGTCTCTTGGTCTCTATGCTTGT 59.165 43.478 0.00 0.00 0.00 3.16
2002 4517 4.180057 GTGTCTCTTGGTCTCTATGCTTG 58.820 47.826 0.00 0.00 0.00 4.01
2003 4518 3.834813 TGTGTCTCTTGGTCTCTATGCTT 59.165 43.478 0.00 0.00 0.00 3.91
2004 4519 3.435275 TGTGTCTCTTGGTCTCTATGCT 58.565 45.455 0.00 0.00 0.00 3.79
2005 4520 3.876274 TGTGTCTCTTGGTCTCTATGC 57.124 47.619 0.00 0.00 0.00 3.14
2006 4521 4.753233 CCTTGTGTCTCTTGGTCTCTATG 58.247 47.826 0.00 0.00 0.00 2.23
2007 4522 3.196685 GCCTTGTGTCTCTTGGTCTCTAT 59.803 47.826 0.00 0.00 0.00 1.98
2008 4523 2.563179 GCCTTGTGTCTCTTGGTCTCTA 59.437 50.000 0.00 0.00 0.00 2.43
2009 4524 1.346068 GCCTTGTGTCTCTTGGTCTCT 59.654 52.381 0.00 0.00 0.00 3.10
2010 4525 1.346068 AGCCTTGTGTCTCTTGGTCTC 59.654 52.381 0.00 0.00 0.00 3.36
2011 4526 1.428869 AGCCTTGTGTCTCTTGGTCT 58.571 50.000 0.00 0.00 0.00 3.85
2012 4527 2.354203 CCTAGCCTTGTGTCTCTTGGTC 60.354 54.545 0.00 0.00 0.00 4.02
2013 4528 1.625818 CCTAGCCTTGTGTCTCTTGGT 59.374 52.381 0.00 0.00 0.00 3.67
2014 4529 1.902508 TCCTAGCCTTGTGTCTCTTGG 59.097 52.381 0.00 0.00 0.00 3.61
2015 4530 3.685139 TTCCTAGCCTTGTGTCTCTTG 57.315 47.619 0.00 0.00 0.00 3.02
2016 4531 4.348168 TCTTTTCCTAGCCTTGTGTCTCTT 59.652 41.667 0.00 0.00 0.00 2.85
2017 4532 3.904339 TCTTTTCCTAGCCTTGTGTCTCT 59.096 43.478 0.00 0.00 0.00 3.10
2018 4533 4.273148 TCTTTTCCTAGCCTTGTGTCTC 57.727 45.455 0.00 0.00 0.00 3.36
2019 4534 4.917906 ATCTTTTCCTAGCCTTGTGTCT 57.082 40.909 0.00 0.00 0.00 3.41
2020 4535 4.567159 CGTATCTTTTCCTAGCCTTGTGTC 59.433 45.833 0.00 0.00 0.00 3.67
2021 4536 4.504858 CGTATCTTTTCCTAGCCTTGTGT 58.495 43.478 0.00 0.00 0.00 3.72
2022 4537 3.871594 CCGTATCTTTTCCTAGCCTTGTG 59.128 47.826 0.00 0.00 0.00 3.33
2023 4538 3.681874 GCCGTATCTTTTCCTAGCCTTGT 60.682 47.826 0.00 0.00 0.00 3.16
2024 4539 2.872858 GCCGTATCTTTTCCTAGCCTTG 59.127 50.000 0.00 0.00 0.00 3.61
2025 4540 2.504175 TGCCGTATCTTTTCCTAGCCTT 59.496 45.455 0.00 0.00 0.00 4.35
2026 4541 2.103263 CTGCCGTATCTTTTCCTAGCCT 59.897 50.000 0.00 0.00 0.00 4.58
2027 4542 2.484889 CTGCCGTATCTTTTCCTAGCC 58.515 52.381 0.00 0.00 0.00 3.93
2028 4543 1.867865 GCTGCCGTATCTTTTCCTAGC 59.132 52.381 0.00 0.00 0.00 3.42
2029 4544 3.179443 TGCTGCCGTATCTTTTCCTAG 57.821 47.619 0.00 0.00 0.00 3.02
2030 4545 3.118408 ACATGCTGCCGTATCTTTTCCTA 60.118 43.478 0.00 0.00 0.00 2.94
2031 4546 2.292267 CATGCTGCCGTATCTTTTCCT 58.708 47.619 0.00 0.00 0.00 3.36
2032 4547 2.017049 ACATGCTGCCGTATCTTTTCC 58.983 47.619 0.00 0.00 0.00 3.13
2033 4548 4.776743 CATACATGCTGCCGTATCTTTTC 58.223 43.478 8.39 0.00 0.00 2.29
2034 4549 4.818534 CATACATGCTGCCGTATCTTTT 57.181 40.909 8.39 0.00 0.00 2.27
2068 4583 3.392440 GCACACACGACGGACGAC 61.392 66.667 6.90 0.00 45.77 4.34
2069 4584 3.202216 ATGCACACACGACGGACGA 62.202 57.895 6.90 0.00 45.77 4.20
2071 4586 1.954146 ACATGCACACACGACGGAC 60.954 57.895 0.00 0.00 0.00 4.79
2072 4587 1.953642 CACATGCACACACGACGGA 60.954 57.895 0.00 0.00 0.00 4.69
2073 4588 1.291184 ATCACATGCACACACGACGG 61.291 55.000 0.00 0.00 0.00 4.79
2074 4589 0.512518 AATCACATGCACACACGACG 59.487 50.000 0.00 0.00 0.00 5.12
2075 4590 1.530720 TCAATCACATGCACACACGAC 59.469 47.619 0.00 0.00 0.00 4.34
2076 4591 1.876322 TCAATCACATGCACACACGA 58.124 45.000 0.00 0.00 0.00 4.35
2077 4592 2.905959 ATCAATCACATGCACACACG 57.094 45.000 0.00 0.00 0.00 4.49
2078 4593 4.163458 TCAATCAATCACATGCACACAC 57.837 40.909 0.00 0.00 0.00 3.82
2079 4594 4.850347 TTCAATCAATCACATGCACACA 57.150 36.364 0.00 0.00 0.00 3.72
2080 4595 7.997107 AATATTCAATCAATCACATGCACAC 57.003 32.000 0.00 0.00 0.00 3.82
2081 4596 8.251721 TCAAATATTCAATCAATCACATGCACA 58.748 29.630 0.00 0.00 0.00 4.57
2082 4597 8.637281 TCAAATATTCAATCAATCACATGCAC 57.363 30.769 0.00 0.00 0.00 4.57
2083 4598 9.825109 AATCAAATATTCAATCAATCACATGCA 57.175 25.926 0.00 0.00 0.00 3.96
2112 4627 9.582431 CAATACTCCTTAACTAGTGATTTCGAA 57.418 33.333 0.00 0.00 0.00 3.71
2113 4628 8.963725 TCAATACTCCTTAACTAGTGATTTCGA 58.036 33.333 0.00 0.00 0.00 3.71
2114 4629 9.751542 ATCAATACTCCTTAACTAGTGATTTCG 57.248 33.333 0.00 0.00 0.00 3.46
2137 4652 5.105635 GCAACCTGGAGAATTGAAATGATCA 60.106 40.000 0.00 0.00 35.85 2.92
2138 4653 5.105635 TGCAACCTGGAGAATTGAAATGATC 60.106 40.000 0.00 0.00 0.00 2.92
2139 4654 4.773674 TGCAACCTGGAGAATTGAAATGAT 59.226 37.500 0.00 0.00 0.00 2.45
2140 4655 4.151121 TGCAACCTGGAGAATTGAAATGA 58.849 39.130 0.00 0.00 0.00 2.57
2141 4656 4.524316 TGCAACCTGGAGAATTGAAATG 57.476 40.909 0.00 0.00 0.00 2.32
2142 4657 4.344679 TGTTGCAACCTGGAGAATTGAAAT 59.655 37.500 26.14 0.00 0.00 2.17
2143 4658 3.703556 TGTTGCAACCTGGAGAATTGAAA 59.296 39.130 26.14 0.00 0.00 2.69
2144 4659 3.295093 TGTTGCAACCTGGAGAATTGAA 58.705 40.909 26.14 0.00 0.00 2.69
2145 4660 2.942804 TGTTGCAACCTGGAGAATTGA 58.057 42.857 26.14 0.21 0.00 2.57
2146 4661 3.068590 ACTTGTTGCAACCTGGAGAATTG 59.931 43.478 26.14 5.18 0.00 2.32
2147 4662 3.068590 CACTTGTTGCAACCTGGAGAATT 59.931 43.478 26.14 4.76 0.00 2.17
2148 4663 2.624838 CACTTGTTGCAACCTGGAGAAT 59.375 45.455 26.14 1.14 0.00 2.40
2149 4664 2.023673 CACTTGTTGCAACCTGGAGAA 58.976 47.619 26.14 11.82 0.00 2.87
2150 4665 1.679139 CACTTGTTGCAACCTGGAGA 58.321 50.000 26.14 3.90 0.00 3.71
2151 4666 0.670162 CCACTTGTTGCAACCTGGAG 59.330 55.000 26.14 19.10 0.00 3.86
2152 4667 0.033601 ACCACTTGTTGCAACCTGGA 60.034 50.000 30.43 12.73 0.00 3.86
2153 4668 0.102844 CACCACTTGTTGCAACCTGG 59.897 55.000 26.14 25.77 0.00 4.45
2154 4669 0.528249 GCACCACTTGTTGCAACCTG 60.528 55.000 26.14 19.75 0.00 4.00
2155 4670 1.815866 GCACCACTTGTTGCAACCT 59.184 52.632 26.14 6.41 0.00 3.50
2156 4671 1.588667 CGCACCACTTGTTGCAACC 60.589 57.895 26.14 9.39 0.00 3.77
2157 4672 0.457681 AACGCACCACTTGTTGCAAC 60.458 50.000 22.83 22.83 0.00 4.17
2158 4673 0.457509 CAACGCACCACTTGTTGCAA 60.458 50.000 0.00 0.00 36.87 4.08
2159 4674 1.138459 CAACGCACCACTTGTTGCA 59.862 52.632 0.00 0.00 36.87 4.08
2160 4675 0.378962 TACAACGCACCACTTGTTGC 59.621 50.000 4.38 0.00 45.18 4.17
2161 4676 2.032799 ACATACAACGCACCACTTGTTG 59.967 45.455 3.02 3.02 46.36 3.33
2162 4677 2.294074 ACATACAACGCACCACTTGTT 58.706 42.857 0.00 0.00 32.77 2.83
2163 4678 1.961793 ACATACAACGCACCACTTGT 58.038 45.000 0.00 0.00 34.89 3.16
2164 4679 2.159894 CGTACATACAACGCACCACTTG 60.160 50.000 0.00 0.00 33.04 3.16
2165 4680 2.063266 CGTACATACAACGCACCACTT 58.937 47.619 0.00 0.00 33.04 3.16
2166 4681 1.705256 CGTACATACAACGCACCACT 58.295 50.000 0.00 0.00 33.04 4.00
2173 4688 2.063266 ACAAGTGGCGTACATACAACG 58.937 47.619 0.00 0.00 43.12 4.10
2174 4689 2.091588 CGACAAGTGGCGTACATACAAC 59.908 50.000 0.00 0.00 42.66 3.32
2175 4690 2.330286 CGACAAGTGGCGTACATACAA 58.670 47.619 0.00 0.00 42.66 2.41
2176 4691 1.985334 CGACAAGTGGCGTACATACA 58.015 50.000 0.00 0.00 42.66 2.29
2185 4700 1.845809 CTCAGGTTGCGACAAGTGGC 61.846 60.000 6.39 0.00 34.76 5.01
2186 4701 0.249868 TCTCAGGTTGCGACAAGTGG 60.250 55.000 6.39 0.00 0.00 4.00
2187 4702 1.143305 CTCTCAGGTTGCGACAAGTG 58.857 55.000 6.39 0.21 0.00 3.16
2188 4703 0.753262 ACTCTCAGGTTGCGACAAGT 59.247 50.000 6.39 0.00 0.00 3.16
2189 4704 1.871080 AACTCTCAGGTTGCGACAAG 58.129 50.000 6.39 0.31 0.00 3.16
2190 4705 2.325583 AAACTCTCAGGTTGCGACAA 57.674 45.000 6.39 0.00 0.00 3.18
2191 4706 2.210116 GAAAACTCTCAGGTTGCGACA 58.790 47.619 6.39 0.00 0.00 4.35
2192 4707 1.531578 GGAAAACTCTCAGGTTGCGAC 59.468 52.381 0.00 0.00 0.00 5.19
2193 4708 1.542547 GGGAAAACTCTCAGGTTGCGA 60.543 52.381 0.00 0.00 0.00 5.10
2194 4709 0.875059 GGGAAAACTCTCAGGTTGCG 59.125 55.000 0.00 0.00 0.00 4.85
2195 4710 2.278332 AGGGAAAACTCTCAGGTTGC 57.722 50.000 0.00 0.00 0.00 4.17
2196 4711 5.598416 AAAAAGGGAAAACTCTCAGGTTG 57.402 39.130 0.00 0.00 0.00 3.77
2217 4732 8.680261 CGTTTTGAATAAACGGATTTACGAAAA 58.320 29.630 13.31 0.00 46.39 2.29
2218 4733 8.201852 CGTTTTGAATAAACGGATTTACGAAA 57.798 30.769 13.31 0.00 46.39 3.46
2219 4734 7.763734 CGTTTTGAATAAACGGATTTACGAA 57.236 32.000 13.31 0.00 46.39 3.85
2243 4758 5.273523 ACGCACGGTTTAAGAGATAAAAC 57.726 39.130 0.00 0.00 37.75 2.43
2244 4759 4.389687 GGACGCACGGTTTAAGAGATAAAA 59.610 41.667 0.00 0.00 35.33 1.52
2245 4760 3.928375 GGACGCACGGTTTAAGAGATAAA 59.072 43.478 0.00 0.00 0.00 1.40
2246 4761 3.056678 TGGACGCACGGTTTAAGAGATAA 60.057 43.478 0.00 0.00 0.00 1.75
2247 4762 2.492881 TGGACGCACGGTTTAAGAGATA 59.507 45.455 0.00 0.00 0.00 1.98
2248 4763 1.274167 TGGACGCACGGTTTAAGAGAT 59.726 47.619 0.00 0.00 0.00 2.75
2249 4764 0.675083 TGGACGCACGGTTTAAGAGA 59.325 50.000 0.00 0.00 0.00 3.10
2250 4765 1.504359 TTGGACGCACGGTTTAAGAG 58.496 50.000 0.00 0.00 0.00 2.85
2251 4766 1.950828 TTTGGACGCACGGTTTAAGA 58.049 45.000 0.00 0.00 0.00 2.10
2252 4767 2.482721 AGATTTGGACGCACGGTTTAAG 59.517 45.455 0.00 0.00 0.00 1.85
2253 4768 2.481185 GAGATTTGGACGCACGGTTTAA 59.519 45.455 0.00 0.00 0.00 1.52
2254 4769 2.070783 GAGATTTGGACGCACGGTTTA 58.929 47.619 0.00 0.00 0.00 2.01
2255 4770 0.872388 GAGATTTGGACGCACGGTTT 59.128 50.000 0.00 0.00 0.00 3.27
2256 4771 1.289109 CGAGATTTGGACGCACGGTT 61.289 55.000 0.00 0.00 0.00 4.44
2257 4772 1.736645 CGAGATTTGGACGCACGGT 60.737 57.895 0.00 0.00 0.00 4.83
2258 4773 1.011968 TTCGAGATTTGGACGCACGG 61.012 55.000 0.00 0.00 0.00 4.94
2259 4774 0.093026 GTTCGAGATTTGGACGCACG 59.907 55.000 0.00 0.00 0.00 5.34
2260 4775 1.126846 CAGTTCGAGATTTGGACGCAC 59.873 52.381 0.00 0.00 0.00 5.34
2261 4776 1.428448 CAGTTCGAGATTTGGACGCA 58.572 50.000 0.00 0.00 0.00 5.24
2262 4777 0.095417 GCAGTTCGAGATTTGGACGC 59.905 55.000 0.00 0.00 0.00 5.19
2263 4778 1.714794 AGCAGTTCGAGATTTGGACG 58.285 50.000 0.00 0.00 0.00 4.79
2264 4779 4.071875 GAAAGCAGTTCGAGATTTGGAC 57.928 45.455 0.00 0.00 0.00 4.02
2281 4796 0.727398 GAGGAATCCAACGGCGAAAG 59.273 55.000 16.62 1.97 0.00 2.62
2282 4797 0.323629 AGAGGAATCCAACGGCGAAA 59.676 50.000 16.62 0.00 0.00 3.46
2283 4798 0.323629 AAGAGGAATCCAACGGCGAA 59.676 50.000 16.62 0.00 0.00 4.70
2284 4799 0.391130 CAAGAGGAATCCAACGGCGA 60.391 55.000 16.62 0.00 0.00 5.54
2285 4800 0.673644 ACAAGAGGAATCCAACGGCG 60.674 55.000 4.80 4.80 0.00 6.46
2286 4801 1.087501 GACAAGAGGAATCCAACGGC 58.912 55.000 0.61 0.00 0.00 5.68
2287 4802 1.067142 TCGACAAGAGGAATCCAACGG 60.067 52.381 0.61 0.00 0.00 4.44
2288 4803 2.094700 TCTCGACAAGAGGAATCCAACG 60.095 50.000 0.61 0.00 46.82 4.10
2289 4804 3.594603 TCTCGACAAGAGGAATCCAAC 57.405 47.619 0.61 0.00 46.82 3.77
2290 4805 4.026744 AGATCTCGACAAGAGGAATCCAA 58.973 43.478 0.61 0.00 46.82 3.53
2291 4806 3.636679 AGATCTCGACAAGAGGAATCCA 58.363 45.455 0.61 0.00 46.82 3.41
2292 4807 4.098654 TGAAGATCTCGACAAGAGGAATCC 59.901 45.833 0.00 0.00 46.82 3.01
2293 4808 5.255710 TGAAGATCTCGACAAGAGGAATC 57.744 43.478 0.00 0.00 46.82 2.52
2294 4809 5.667539 TTGAAGATCTCGACAAGAGGAAT 57.332 39.130 0.00 0.00 46.82 3.01
2295 4810 5.468540 TTTGAAGATCTCGACAAGAGGAA 57.531 39.130 0.00 0.00 46.82 3.36
2296 4811 5.011125 AGTTTTGAAGATCTCGACAAGAGGA 59.989 40.000 0.00 0.00 46.82 3.71
2297 4812 5.233988 AGTTTTGAAGATCTCGACAAGAGG 58.766 41.667 0.00 0.00 46.82 3.69
2299 4814 7.215719 TCTAGTTTTGAAGATCTCGACAAGA 57.784 36.000 0.00 0.00 38.72 3.02
2300 4815 7.221838 GGATCTAGTTTTGAAGATCTCGACAAG 59.778 40.741 11.05 0.00 37.77 3.16
2301 4816 7.036220 GGATCTAGTTTTGAAGATCTCGACAA 58.964 38.462 11.05 0.75 37.77 3.18
2302 4817 6.405953 GGGATCTAGTTTTGAAGATCTCGACA 60.406 42.308 11.05 0.00 37.77 4.35
2303 4818 5.980715 GGGATCTAGTTTTGAAGATCTCGAC 59.019 44.000 11.05 0.00 37.77 4.20
2304 4819 5.656859 TGGGATCTAGTTTTGAAGATCTCGA 59.343 40.000 11.05 0.00 40.21 4.04
2305 4820 5.907207 TGGGATCTAGTTTTGAAGATCTCG 58.093 41.667 11.05 0.00 40.21 4.04
2307 4822 9.790344 CAATATGGGATCTAGTTTTGAAGATCT 57.210 33.333 11.05 0.00 37.77 2.75
2308 4823 9.784531 TCAATATGGGATCTAGTTTTGAAGATC 57.215 33.333 4.15 4.15 37.15 2.75
2313 4828 9.170890 ACCTATCAATATGGGATCTAGTTTTGA 57.829 33.333 0.00 0.00 37.20 2.69
2314 4829 9.799106 AACCTATCAATATGGGATCTAGTTTTG 57.201 33.333 0.00 0.00 37.20 2.44
2317 4832 9.799106 CAAAACCTATCAATATGGGATCTAGTT 57.201 33.333 0.00 0.00 37.20 2.24
2318 4833 9.170890 TCAAAACCTATCAATATGGGATCTAGT 57.829 33.333 0.00 0.00 37.20 2.57
2319 4834 9.442047 GTCAAAACCTATCAATATGGGATCTAG 57.558 37.037 0.00 0.00 37.20 2.43
2320 4835 8.094548 CGTCAAAACCTATCAATATGGGATCTA 58.905 37.037 0.00 0.00 37.20 1.98
2321 4836 6.936900 CGTCAAAACCTATCAATATGGGATCT 59.063 38.462 0.00 0.00 37.20 2.75
2322 4837 6.934645 TCGTCAAAACCTATCAATATGGGATC 59.065 38.462 0.00 0.00 37.20 3.36
2323 4838 6.837312 TCGTCAAAACCTATCAATATGGGAT 58.163 36.000 0.00 0.00 37.20 3.85
2324 4839 6.241882 TCGTCAAAACCTATCAATATGGGA 57.758 37.500 0.00 0.00 37.20 4.37
2325 4840 6.317642 TGTTCGTCAAAACCTATCAATATGGG 59.682 38.462 0.00 0.00 39.60 4.00
2326 4841 7.148323 TGTGTTCGTCAAAACCTATCAATATGG 60.148 37.037 0.00 0.00 0.00 2.74
2327 4842 7.747888 TGTGTTCGTCAAAACCTATCAATATG 58.252 34.615 0.00 0.00 0.00 1.78
2328 4843 7.915293 TGTGTTCGTCAAAACCTATCAATAT 57.085 32.000 0.00 0.00 0.00 1.28
2329 4844 7.915293 ATGTGTTCGTCAAAACCTATCAATA 57.085 32.000 0.00 0.00 0.00 1.90
2330 4845 6.817765 ATGTGTTCGTCAAAACCTATCAAT 57.182 33.333 0.00 0.00 0.00 2.57
2331 4846 6.627395 AATGTGTTCGTCAAAACCTATCAA 57.373 33.333 0.00 0.00 0.00 2.57
2332 4847 6.627395 AAATGTGTTCGTCAAAACCTATCA 57.373 33.333 0.00 0.00 0.00 2.15
2333 4848 7.924103 AAAAATGTGTTCGTCAAAACCTATC 57.076 32.000 0.00 0.00 0.00 2.08
2355 4870 3.736530 TCGTCCGTTTTTCGTGAAAAA 57.263 38.095 14.67 14.67 44.98 1.94
2356 4871 3.736530 TTCGTCCGTTTTTCGTGAAAA 57.263 38.095 3.74 3.74 38.40 2.29
2357 4872 3.736530 TTTCGTCCGTTTTTCGTGAAA 57.263 38.095 0.00 0.00 37.94 2.69
2358 4873 3.736530 TTTTCGTCCGTTTTTCGTGAA 57.263 38.095 0.00 0.00 37.94 3.18
2359 4874 3.736530 TTTTTCGTCCGTTTTTCGTGA 57.263 38.095 0.00 0.00 37.94 4.35
2376 4891 1.676006 CGTGCTCCTGGTTCAGTTTTT 59.324 47.619 0.00 0.00 0.00 1.94
2377 4892 1.308998 CGTGCTCCTGGTTCAGTTTT 58.691 50.000 0.00 0.00 0.00 2.43
2378 4893 0.535102 CCGTGCTCCTGGTTCAGTTT 60.535 55.000 0.00 0.00 0.00 2.66
2379 4894 1.071471 CCGTGCTCCTGGTTCAGTT 59.929 57.895 0.00 0.00 0.00 3.16
2380 4895 2.743718 CCGTGCTCCTGGTTCAGT 59.256 61.111 0.00 0.00 0.00 3.41
2381 4896 2.046892 CCCGTGCTCCTGGTTCAG 60.047 66.667 0.00 0.00 0.00 3.02
2382 4897 1.990160 AAACCCGTGCTCCTGGTTCA 61.990 55.000 7.57 0.00 41.40 3.18
2383 4898 1.228154 AAACCCGTGCTCCTGGTTC 60.228 57.895 7.57 0.00 41.40 3.62
2384 4899 1.228154 GAAACCCGTGCTCCTGGTT 60.228 57.895 0.00 2.43 44.04 3.67
2385 4900 2.430367 GAAACCCGTGCTCCTGGT 59.570 61.111 0.00 0.00 0.00 4.00
2386 4901 2.359975 GGAAACCCGTGCTCCTGG 60.360 66.667 0.00 0.00 0.00 4.45
2398 4913 1.540267 GCCTCTTTCGGAAAGGGAAAC 59.460 52.381 27.71 14.80 41.66 2.78
2399 4914 1.144093 TGCCTCTTTCGGAAAGGGAAA 59.856 47.619 27.71 14.52 41.66 3.13
2400 4915 0.768622 TGCCTCTTTCGGAAAGGGAA 59.231 50.000 27.71 19.29 41.66 3.97
2401 4916 0.036306 GTGCCTCTTTCGGAAAGGGA 59.964 55.000 27.71 14.21 41.66 4.20
2402 4917 1.298859 CGTGCCTCTTTCGGAAAGGG 61.299 60.000 25.66 23.41 38.75 3.95
2403 4918 1.912371 GCGTGCCTCTTTCGGAAAGG 61.912 60.000 25.66 15.57 39.01 3.11
2404 4919 1.497722 GCGTGCCTCTTTCGGAAAG 59.502 57.895 21.64 21.64 39.88 2.62
2405 4920 1.964373 GGCGTGCCTCTTTCGGAAA 60.964 57.895 2.98 2.78 0.00 3.13
2406 4921 2.358247 GGCGTGCCTCTTTCGGAA 60.358 61.111 2.98 0.00 0.00 4.30
2407 4922 4.388499 GGGCGTGCCTCTTTCGGA 62.388 66.667 11.25 0.00 36.10 4.55
2408 4923 3.976701 ATGGGCGTGCCTCTTTCGG 62.977 63.158 11.25 0.00 36.10 4.30
2409 4924 2.436646 ATGGGCGTGCCTCTTTCG 60.437 61.111 11.25 0.00 36.10 3.46
2410 4925 3.056313 GCATGGGCGTGCCTCTTTC 62.056 63.158 11.25 0.00 39.18 2.62
2411 4926 3.064324 GCATGGGCGTGCCTCTTT 61.064 61.111 11.25 0.00 39.18 2.52
2417 4932 4.783621 TCAGAGGCATGGGCGTGC 62.784 66.667 5.07 5.07 44.31 5.34
2418 4933 2.184830 CATCAGAGGCATGGGCGTG 61.185 63.158 0.00 0.00 42.47 5.34
2419 4934 1.913951 TTCATCAGAGGCATGGGCGT 61.914 55.000 0.00 0.00 42.47 5.68
2420 4935 0.749091 TTTCATCAGAGGCATGGGCG 60.749 55.000 0.00 0.00 42.47 6.13
2421 4936 1.612463 GATTTCATCAGAGGCATGGGC 59.388 52.381 0.00 0.00 40.13 5.36
2422 4937 2.621998 GTGATTTCATCAGAGGCATGGG 59.378 50.000 0.00 0.00 40.53 4.00
2423 4938 3.284617 TGTGATTTCATCAGAGGCATGG 58.715 45.455 0.00 0.00 40.53 3.66
2424 4939 4.439700 GGTTGTGATTTCATCAGAGGCATG 60.440 45.833 0.00 0.00 40.53 4.06
2425 4940 3.698040 GGTTGTGATTTCATCAGAGGCAT 59.302 43.478 0.00 0.00 40.53 4.40
2426 4941 3.084039 GGTTGTGATTTCATCAGAGGCA 58.916 45.455 0.00 0.00 40.53 4.75
2427 4942 2.096496 CGGTTGTGATTTCATCAGAGGC 59.904 50.000 0.00 0.00 40.53 4.70
2428 4943 3.338249 ACGGTTGTGATTTCATCAGAGG 58.662 45.455 0.00 0.00 40.53 3.69
2442 4957 3.645975 CGCGAAAGGCACGGTTGT 61.646 61.111 0.00 0.00 43.84 3.32
2443 4958 4.383602 CCGCGAAAGGCACGGTTG 62.384 66.667 8.23 0.00 43.84 3.77
2444 4959 4.612412 TCCGCGAAAGGCACGGTT 62.612 61.111 8.23 0.00 46.92 4.44
2445 4960 4.612412 TTCCGCGAAAGGCACGGT 62.612 61.111 8.23 0.00 46.92 4.83
2447 4962 4.445545 GCTTCCGCGAAAGGCACG 62.446 66.667 8.23 0.00 43.84 5.34
2448 4963 2.400896 TTTGCTTCCGCGAAAGGCAC 62.401 55.000 8.23 0.00 43.84 5.01
2449 4964 1.729470 TTTTGCTTCCGCGAAAGGCA 61.729 50.000 8.23 11.21 42.97 4.75
2450 4965 1.007849 TTTTGCTTCCGCGAAAGGC 60.008 52.632 8.23 8.27 42.97 4.35
2454 4969 0.110419 CACGATTTTGCTTCCGCGAA 60.110 50.000 8.23 0.00 39.65 4.70
2455 4970 0.946700 TCACGATTTTGCTTCCGCGA 60.947 50.000 8.23 0.00 39.65 5.87
2456 4971 0.789383 GTCACGATTTTGCTTCCGCG 60.789 55.000 0.00 0.00 39.65 6.46
2457 4972 0.517316 AGTCACGATTTTGCTTCCGC 59.483 50.000 0.00 0.00 0.00 5.54
2458 4973 2.069273 AGAGTCACGATTTTGCTTCCG 58.931 47.619 0.00 0.00 0.00 4.30
2459 4974 3.814945 CAAGAGTCACGATTTTGCTTCC 58.185 45.455 0.00 0.00 0.00 3.46
2460 4975 3.229552 GCAAGAGTCACGATTTTGCTTC 58.770 45.455 5.52 0.00 40.58 3.86
2461 4976 2.349817 CGCAAGAGTCACGATTTTGCTT 60.350 45.455 9.88 0.00 41.34 3.91
2462 4977 1.195448 CGCAAGAGTCACGATTTTGCT 59.805 47.619 9.88 0.00 41.34 3.91
2463 4978 1.194547 TCGCAAGAGTCACGATTTTGC 59.805 47.619 0.00 3.16 45.01 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.