>input_sequence_77949
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--------------------------------------------------------------AAACCCAAAG-CACC--A
---G---CTACATATCCTACTCAAGCACACGC------TCACGATGGCATCCAGAGCTGCTACCTTCGTCGCCCTGAGCC
TCCTCCTCTCCGCGGTCGCCACGCACGGCTGCGGAC---CCTATTGCCAGCCGCTAGTCGTCGTGCCGACGCCGTCCGTT
GTTGTTCCGCCGACGTACCACGGAGGAGGAGCGCACGGCCACGG------CGCGCAGTGCTCTATCGACGCGCTAAAGCT
GAGGGTGTGCGCCAACGTTCTCGACGGCCTGCTCGGCCTCAAGGTCGACGTTCCGGCGCACGACGAGTGCTGCCCGCTGC
TCCAGGGGTTGGTCGACCTTGATGCCGCCGTCTGCCTGTGCACCGCCGTCAGGGCCAACGTCCTCGGCATCCATCTCAAC
GTGCCTGTGGACATCAGCCTCCTCCTCAACCACTGCAGCAAGACGTGCCCGTCCGAGTTCACTTGCCCAGGCCATTAACG
G--ACGCTTACTACTGCACGTACGGGC---------GCCGAATAAG----------------------------------
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>chr4B_1_TraesCS4B01G313400
AGCCTACTAGCTTATTCTATGAAAAACGTTTCCTTAAAAAGGAAA-TCAGCCAAAGTTCTCACTAGTATCATATCAAAAA
GACAGTGATGAGCGCCTGATTAATCTTTGTCATTTGATAATCAATCCAGATGACTATCAAAGCATGTACCTGTAGAGCCC
ACATCACACTGATGGTACTATCAACGATGAACACACGGTTCTAGCT----------------------------------
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------------------------------------------------GGCTCAATATTGGTCTCACATGGAGGTAGGCA
GGTACTAGCTAGCATAACCCTCGGTGTCGGCTTACCTTCCGGTACGGTGGCTATGCGCGCCCATATGCATATCATTATGG
ACTCCACTACCAATCTGATTTCAGATTTTT----TACCATGGTAAATCAAACATTTTTTATGGCAAATAGTGTTCTTCGA
GGATGGCAAGTTTTAGTTGGCAAGCATGTCAAATCCATCCCAGTT----TATTTTACTAAAAAATTGCCGTGTTTTGCAA
ACTAAATTTGTCATAATTGCACAATATAAATTGCCAT-AAAAATGTCAGATTTGTCATGCCTACATTTCTAACATCAAAT
TTTTAGTGTTTCCAATTATTATTTCCTTGTCCATTGCGCCGCGCGCGCATCGCTAATGAAGTCCAAGCGCTCACACCGCA
TGGTTTAA---TTCTCAACTTGCTTGCATAATCTTGTCCTTTTTACTCTAAAATATGTTGTGTAGCATGACAAGGTTGG-
----------CTAACATGCATGAACATGCAAGGGTATTGCTCAACTTGTTGCCGTAT----CTTCAGGATTAATATTCCA
AAACCATCGGT-CCCTGATCATGCTAAAATCTCGCCGTATC------AAACAAATGATACACCGAGAGGACAACCTAGCA
GTCTCGAAGCCGATCGAATCGCACATGGCCACGTACGTCCGA---T----CATGCA------------------------
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---------------------------------TACATGCCTACGCTACTACGCCAAACAGTTCGATCCCATGCATTGCA
TGCACGCATCCACATCCCCATGGCTATAAATACAACACTCTCTCCAAGCTGTC-TGCATCCCAAACCCAAAG-CACC--A
---G---CTACATATCCTACTCAAGCACACGC------TCACGATGGCATCCAGAGCTGCTACCTTCGTCGCCCTGAGCC
TCCTCCTCTCCGCGGTCGCCACGCACGGCTGCGGAC---CCTATTGCCAGCCGCTAGTCGTCGTGCCGACGCCGTCCGTT
GTTGTTCCGCCGACGTACCACGGAGGAGGAGCGCACGGCCACGG------CGCGCAGTGCTCTATCGACGCGCTAAAGCT
GAGGGTGTGCGCCAACGTTCTCGACGGCCTGCTCGGCCTCAAGGTCGACGTTCCGGCGCACGACGAGTGCTGCCCGCTGC
TCCAGGGGTTGGTCGACCTTGATGCCGCCGTCTGCCTGTGCACCGCCGTCAGGGCCAACGTCCTCGGCATCCATCTCAAC
GTGCCTGTGGACATCAGCCTCCTCCTCAACCACTGCAGCAAGACGTGCCCGTCCGAGTTCACTTGCCCAGGCCATTAACG
G--ACGCTTACTACTGCACGTACGGGC---------GCCGAATAAGATTTGCTTTCGATCCGTACTTCATTGTTATT---
---TT-CGTG--------------------TCCACATTTGAATCGTTGTTACCAG------------------TGCTACT
CCTCTTG-TTTTTGGCAAACAACCATGTACTCTTCGTATT-GATATAT--CATCAGTGAGCAA-AATTATTGCTCTAGTT
AATTGTCCTTTTTC--TTTCTTTCTGAAACACAAGTA-TGATC----TAGACGCGCGTGCACACATATGCATACACACGT
AGCTTCTTCGTTTTTAGAACTATAGTAGATGACACCCCATCCGTTGCTGCGGGGGCCATACTAAAACAAATATGTAAATA
GGTGTGGTAAAATAATGAAAAACAATTGTAATAGTTATCTGTTTACATCTACTTGCCGCAAACGGGCGGCAAACATGGCG
AGACCACGCGCAGGCTTGGCTGGCTGAGTTGTGCAATGGCCACATGCATATGGTGCGAGCTATATACGGGATTTATTGTG
ACAAAAAAGAAATTGGAACTAGTCCTGAGAAAGCAACAAGCATAGAGACCAAGAGACACAAGGCTAGGAAAAGATACGGC
AGCATGTATGCTACGCATGGGCGTCGTCCGTCGTGTGTGCATGTGATTGATTGAATATTTGATTAATTCGAAATCACTAG
TTAAGGAGTATTGATCATTTCAATTCTCCAGGTTGCAACAAGTGGTGCGTTGTATGTACGCCACTTGTCGCAACCTGAGA
GTTTTCCCTTTTTTTCGTAAATCCGTTTATTCAAAACGTTTTATCTCTTAAACCGTGCGTCCAAATCTCGAACTGCTTTC
GCCGTTGGATTCCTCTTGTCGAGATCTTCAAAACTAGATCCCATATTGATAGGTTTTGACGAACACATTTTTTTCACGAA
AAACGGACGAAAAAACTGAACCAGGAGCACGGGTTTCCCTTTCCGAAAGAGGCACGCCCATGCCTCTGATGAAATCACAA
CCGTGCCTTTCGCGGAAGCAAAATCGTGACTCTTGCGAAAGAAAGAAATATAGAAAATACGTT
>chr4B_1
AGCCTACTAGCTTATTCTATGAAA-ACGTTTCCTTAAAAAGGAAAATCAGCCAAAGTTCTCACTAGTATCATATCGAAAC
GACAGTGATTAGCACCTGATTAATCTCTATCATTTGATAATCAATCCAGATGACTATCAAAGCATGTACCTGTAGAGCCC
ACATCACACTGATGGTACTATCAACGATGAACACACGGTTCTAGCT----------------------------------
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------------------------------------------------GGCTCAATATTGGTCTCACATGGAT-------
--------GTAGCATAACGCTCGATGTCGGCTAACCTTCCGGTACGGTGGCTATGTGCGCCCATATGCATATTATTATGG
ACTCCACTACGAACTTGACTTCAGATTTTT----TACCATGGTAAATCAAACATTTTAAA-GGCAAATAATGTTCTTAAA
GAATGATAAG-TTTAGTTGACGAGCATGATAAATGCACCCAGTTTATTT-TTTTTA-TCAAAAA----------------
------------ATTATCGCGCAATATAAATTGCCACGAAAAATGTTAGATTTATCGTGCCTAAAAATCTGAAGTCAATT
TTTAAAATTTTCTGATTAGTATTTCCTTGTCCACTGCGGCGCGCGCGCATCGCTAACGAAGTCCAACCGCTCACACGGCA
TGGCTAAATACTTCTCAACTTGCTTGCATAATCTTGTCCTTTTTACTCTAAAATATGTTGTGTGGCATGACAAGGTTGG-
----------CTAACATGGATGAACATACAAGGGTATTGCTTAACTTGTTGCCGTAT----CTCCAGGATTAATATACGA
AAACCATCAGTCCC-TGATCATGCTAAAATATTGCCGTATC------AAACAAATGATACACCCGGATGACAACCTAGCA
GTCTCCAAGCCGATCGAATCGCACATGGCCACGTA----CGA---T----CATGCA------------------------
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---------------------------------TACATATCTAAGCTACTACGCCAAACAGTTTGATCCTATGCATG-CA
CGCATCGT------TCCCC-CGGCTATAAATACAGCACTCTCTCCAAGCTCTTATGCATCCCAAACCCAAAG-CACT--A
---G---C----TATCCCACTCAAGCACACGC------TCACGGTGACATCCAAAGCTGCCATCTTCGTCGCCCTGAGCA
TCGTCCTCTCCTCCGTCGCCGCGCACGGCTGCGGAC---CCTATTGCCAGCCTCCAGTCGTCGTGCCGACGCCGCCCGTT
GTCGTTCCGCCGCCGTACCAAGGAAGAGGAGCGCACGGCCACGG------CGGGCAGTGCTCTATCGACGCGCTAAAGCT
GCGGGTGTGCGCCAACGTTCTTGGCGGCCTGCTCGGCCTCAAGGTCGGCGTTTCGGCGCGCGACGAGTGCTGCCCGCTGC
TCCAGGGGTTGGTCGACCTTGACGCCGCCGTCTGCCTCTGCACCGCCGTCAGGGCCAACGTCCTCGGCATCCACCTCGAC
GTGCCTGTGGACATCAGCCTCCTCCTCAACCATTGCGGCAAGACGTGCCCGTCCGAGTTCACTTGCCCAGGCCATTAACG
G--ACGCGTACTGATGCACGTACGGGC---------GCCGACTAAGATTTGCTTTCGATCCGTACTTCATTGTTATT---
---TT-CGTGAGTTGTGGAACCGTTCCACTTCCACATTTGAATCCTTGTAACCAG------------------T------
-----TA-CTTTTGGCAAACAACCATGTACTCTTCGTATT-GATATATATCATCACTGTGCAATCATTATTACTCTAGTT
AATTGCCCAAAATAATTATTTTTCTGAAGCACGGGTA-TGATATATATAGATGCGCGTGCACACACACATAAT-----GT
AGTTTCTTCATT-TTGTGAACT-----GATGATGTCTCACGCGTTGCTGCCGGAGCC--GCTAAAACAAATGTGTAATTA
GGTGTTTAAAAAAAACAAAAACA---------------------------------------------------------
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---------------------------------------------------------------
>chr4B_1
AGCCTA-TAGCTTATTCTATGAAAGACGTTTCCTTAAAAAGGAAAATCAGCCAAAGTTCTCACTGGTATCA-ATAAAAAG
GATAGTGATTAGTGCCTGATTAATCTGTATCATTTGATAATCAATCCAGATGACTATCAAAGCATAAACCTGTAGAGCCC
ACATCACAGATG----------------A---ACACGGTTCTAGCT----------------------------------
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------------------------------------------------GGCTCAATATTGGTCTCACATGGAAGTAGG--
-----TAGGTAGCATAACCCTCGATGT----------------------------------CATATGCATATTATTATGG
ACTCCACTACCAATCTGATTTCAGATTCTT----TACCATGGCAAATCAAACATTTTTCATGGCAAATAATGTTCTCCGA
GGATGGCATG-TTTAGTTGGCGAGCATGCCAAATCCATCCCAGTT----TATTTAC-CAAAAAAATGCCGCGCTTTGCAA
ACTAAATTTGTCATAATCGCGCAATATAAATTGCCAT--AAAATGTCAGATTTATCACGCCTAAATTTCTAACGTTAAAT
TTTTAGTGTTTCCTATTATTATTTCCTTGTCCATTGCGCCGCGCACGCATCGCTAATGAAGTCCAAGCGCTCACACCGCA
TGGTTTAA---TTCTCAACTTGCTTGCATAATCTTGTCCTTTTTAATCTAAAA-ATGTTGTGTAGCATGACAAGGTTGGC
TAACAGC---CTAACATGCATGAACATGCAAGGGTATTGCTCAACTTGTTGCCGTAT----CTTCAGGATTAATATTCCA
AAACCATCGGT-CC-TGATCACGCTAAAATCTCGCCGTATC------AAACAAATGGTACACCGAGAGGACAACCTAGCA
GTCTCGAAACCGATCGAATCGCACATGGCCACGTA----T-------GATCATGCA------------------------
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---------------------------------TACATGCCTAAGCTACTACGCCAAACAGTTCCATTCCATGCATG-CA
CGCATCCATATA---CCCC-TGGCTATAAATACAACACTCTCTCCAAGCTCTCATGCATCCCAAACCAAAAG-CACC--A
---G---CTGCATATCCTACTCAAGCACACGC------TCACAATGGCATCCAGAGCTGCTACCTTCGTCGCCCTGAGCC
TCCTCCTCTCCGCGGTCGCCACGCACGGCTGCGGAC---CCTATTGCCAGCCGCCAGTCGTCGTGCCGACACCGCCCGTT
GTCGTTCCGCC-CCGTACCACGGAGGAGGAGCGCACGGCCACGG------CGGGCAGTGCTCTATTGACGCGCTAAAGCT
GAGGGTGTGCGCCAACGTTCTCGGCGGCTTGCTCGGCCTCAAGGTCGGCGTTCCGGCGCACGACGAGTGCTGCCCGCTGC
TCCAGGGGTTGGTCGACCTTGATGCCGCCGTCTGCCTGTGCACCGCCGTCAGAGCCAACGTCCTCGGCATCCATCTCAAT
GTGCCTGTGGACATCAGCCTCCTCCTCAACCACTGCGGCAAGACGTGCCCGTCCGAGTTCACTTGCACAGGCCATTAACG
G--ACGCGTACTGCTGCACC----GGC---------GCCGAATAAGATTTGCTTTCCATCCGTACTTCGTTCTTATT---
---TT-CGTG----------------------------------------------------------------------
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>chr4D_1
AGCCTACTAGCTTATTCTATGAAAAACGTTTCCTTAAAAAGGAAAATCAGCCACAGTTCTCACTAGTATCATATCAAAAA
GACAGTGATTAGCGCCTGATTAATCTCTATCATTTGATAATCAATCCAGATGACTATGAAAGCATGTACCTGTAAAGCCC
GCATCACAGATG----------------A---ACACGGTTCTAGCTGGCTCAATACCTAAAATCTTAAAAGTGCATACGC
ACTTTTTGGGCGTCGTGGGCGGCCGGCTCCTGGCCGCACGATCTTGCCCGAACCGCCGCGAGCACGGGCCAGGTGTTACC
TGGTCGGGCTCTCTCAATCGCTAGCGTTTGTCACCAACTACACCCCGCTTTCACACCCTTCCTCCTCATCCCCTCGCTCC
AGCCGCCTCCGCCCTGCTCGCTCAGGCCGCCTCCGCTCCAACTCGCGCTGGCCGTCTCCACCCTGCTCGCTCCGGCCACC
TCCGCTCCACCTCGCGTCGTCTGCCTCTGCCCCTCTAGCACAGGCCGCCGCCGACCCACCTCCCTCCCGAGCGCTCCATC
CCAGAGGTGGAGTGAGCTTTCCCCCTTCGTCGGAGTTGCAGAAGAAGGCGCTCTTGGATGGGATTGATTTGAAGGAAGGG
CAAATGGGCTGGCATCTCTGCCGGCTATGACTGTGCCCCTCTCGTTTGGTGCTACAACAATACGAGACACGGCACAGTAG
CGGCGATGCAGGCAGACTCCCGCTGTGGCTCCTAGCGCCGCGGCCGGAGACGAGAGGTAGCAACAATGGCTAGCGCTAAG
AGTTGCGGATGCCTTCAGCCAACACCCAATGCATCGCGGTGACACCCTATAACACAGCGACGCTGGTCAATTTTGTTTCT
ATCCACACACACACACGAATGGATAGATAGGAACCTTATCTCTTTGTCATGTTTCACCTAAATCCATCCATTCTTCTGTA
ATTCGTAAATTCATTTTTTTTTTGTAGCTGCATGATCTAACTTTCTATGAGGTTGCAACCTACCGACCATGACAACGTAA
TGTGCAACTAGTCTACTGCGCCGGCCAACAACCTAGTAGTCGATGTGCAACCCTCATCCCTGCTCGTGGATGTGTAGTTT
TTCACACTTTGCACACCCTGCCCCACCCCTCTACCAGTGCTATGTTCAACTTAGTCTGTTGTTCACGCCAACAACTTATT
AGTCGATGTGCAACTCCCTCCCCACCCTTGTGGATATGTAGTTTCAGTTGGCGGGGGCAATATACGGAGTTGCACACGTC
TGCTAGGCAGTTGGCCGGGGCAACATACGAAGTTGCACATCTCACAGGCAGGATAGTTTGATGGTGAAAACTCCACATTC
ATGAGTGGAAAGTTGCATATAGACAGGACGCTAAAGTTGTACATCTCACTAGCAGGGGTGGTTTGGCCTAGGTGCTAGCA
GGGAAATTACACATTCATGGGATACAAGAAAAAGTTGCACATCACTGTTAGACAGTTGGCCGTGGCAGTATCTGAAGTTG
CACATCCACTGGTAGATATTTGGCCGATGCAGCAAACAGTGAAAGCACATCCATGAGCAGAGGGAAAGTTGCACATCAAC
TACTAGGAAGTTGGTCTGGGTCACAGACGAGGTTGCACATCTAAGTGGAAGGAGTTAGTTTAGGGGTGGAGGTGTCATCA
ATGAAAACCGCACGTCCACTGGGTAGGTGGAAAGTTGCACATCCAGTGTCAGTAGTTGCACATCGACGATTAGATAGTTG
CACAAAACAGGGACTAAATTGCACAAAAAAAATTCATCAAAACATGCCCATGCGAAATTGCCCCTCACGCGCGGCAACTA
CCAAGCATTTGGCAGTGTAGTTAGCCGGGGCAGTTAGACGAAATTGCACATTTCACTGTTAGGGAGTAGTATGGGACGGT
GCCATCAATGAAAACTGCATGTCCATTGTTAGAGGGAAAAGTTGCACATCGACTATCAACTAGTTGCACATCGATGGCTA
AACTGTTGCACCAAACGGGGACTAAATTGCACAGAAAAAAGTTCGTCGAAATATACCCATGCGGGATCCAGTTTCGAAGA
GCACGCCGCGAGGGTTCCAACGGTGAAAACGGATCTTAATTCCGAAACACAATTTAAAAATTATGACTTTTTAAAAAATT
TAAAACTCAAATTAAATACGTTCATATCTGTTCACATGTATGCTTTTGTAGTATTTTTCTTGTACGTGGTACTTTTTCTA
ATTAGAATTGTTTTATTAATTGGAGGGGACAAATTATTATTTTTTATGGATTAGGGATCAAAATTTTCTGTTTTAGACCG
GCCGCTTGAGACGACTAGCGAGCAGCCGGCCGCTCGCTAGATCGGTCCGGCTCAATATTGGTCTCACATGGAG-------
--------GTAGCATAACCATCGATGTCGGCTTACCTTCCGGTACGGTGGCTATGCGCGCCCATATGCATATTATTATGG
ACTCCACTACCAATCTGATTTCAGA---TT----TACCATGGTAAATCAAACATTTTTCATGGCAAATAATGTTCTCTGA
GGATGGCATG-TTTAGTTGGCAAGTATGTCAAATCCATCCCAGTT----TATTTTAGCAAAAGATTGCAGTGCTTTGCAA
ACTAAATTTGTCATAATTGCGCAATATAAATTTCCAT-AAAAATGTCAGATTTATCATGCCTAAATTTCTAACGTCAAAT
TTTTAGTGTTTCCGATTATTATTTCCTTGTCCATTGCGCCGCGCGCGCATCGCTAATGAAGTCCAAGCGCTCGCACCGCA
TGGTTTAA---TTCTCAACTTGCTTGCATAATCTTGTCCTTTTTAATCTAAAATATGTTGTGTAGCATGACAAGGTTGG-
----------CTAACATGCATGAACATGCAAGGGTATTGCTCAACTTGTTGCCGTATATATCTTCAGGACTGATATTCCA
AAACCATCAGTCCC-TGATCATTCTACAATCTCGCCGTATC------AAACAAATGATACACCCGGATGACAACCTAGCA
GTCTCGACGCCGATCGAATCGCACATGGCCACGTA----CGA---TCGATCATGCA------------------------
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---------------------------------TACATGCCCAAGCTACTACGCCAAACAGCTTGATCCCATGCAC--CA
CGCATCCATGCATATCCCC-CGGCTATAAATACAACACTCTCTTCAAGCTCTCATGCATCCCAAACCCAAAG-CACT--A
---GTAGC----TATCCCACTCAAGCACACGC------TCACGATGGCATCCAGAGCTGCTACCTTCGTCGCCCTGAGCC
TCCTCCTCTCCGCCGTCGCCACGCACGGCTGCGGAC---CCTATTGCCAGCCGCCAGTCGTCGTGCCGACACCGCCCGTT
GTCGTTCCGCCGCCGTACCATGGAGGAGGAGCGCACGGCCACGG------CGGGCAGTGCTCTATCGACGCCCTAAAGCT
GAGGGTGTGCGCCAACGTTCTCGGCGGCCTGCTCGGCCTCAAGGTCGGCGTTCCGGCGCACGACGAGTGCTGCCCGCTGC
TCCAGGGGTTGGTCGACCTTGACGCCGCCGTCTGCCTGTGCACCGCCGTCAGGGCCAACGTCCTCGGCATCCACCTCAAC
GTGCCTGTGGACATCAGCCTCCTCCTCAACCACTGCGGCAAGACGTGCCCGTCCGAGTTCACTTGCCCAGCCCATTAACG
G--ACGCCTACTGCT-C----ACGGGC---------GCCGAATAAAATTTGCTTTCGATCCGTACGTCGTTGTTATT---
---TT-CGTG--------------------TCCACATTTGAATCCTTGTAACCAG------------------TACTACT
CTTTTTGT------------------------------------------------------------------------
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>chr4A_7
------CTAGCTTATTCTATGAAAAAGTTTCCCTAGAAAGAAAAACTCAGCCAAAGTTCTCAC---TATCATATCAAAAT
GACAGTCATTAGCACCTGATTAATTTCTACCATTTGATAATTAA-CCAGATGACTATCAAAGAATGTACCTGCAGAGTCC
CCATCATATTGATGGTACTATCAAAGATA---ACATCGTTCTAG------------------------------------
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----------------------------------------------CCGGTTCAGTATTGGTCTCACATGGAG-------
--------GTAGCATAAACTTCGATGTCGGCTTACATTCCGGTATGGTGGCTATGTGTGTC------CATATTATTATGG
CCTCCACTATAAATCTGATGTCAGA---TTTTTTTATCATGATAAATCAAACATTTTTCATCGTAAATTATGTTCTC---
---TGGCAAG-TTTAGTTGGCGAGCATGGCAAATCCTCTTCAG---TTCGTTTTTT-TCAAAAATTACTGTGC-TTGCAA
GTTAAATTTGCCATCATCATGCAATATAAGTTGCCATGAAAAATGTCAGATTTATCATGTCTAACGTCTG-------ATT
TTTAGGTGTTTCTGATTATTATTTCCTTGTCCACTGCGCCCCGCGCGCATCGCTAACAAAGTCCAAGCGCTCACACC---
----TTAT---TCCTCAACTTGCTTACATAATCTTGTCCTTTTTAATCTAAAATATGCTGTGTAGCATCACAAAG-----
----GTTGGCTTAACATGGATGAACATGCAAGAGCATTGCTCAACTTGTTGCCGTAT----CTTCAGGAATAATATTCCA
AAACCATCAGT-CCGTGATCATGCTAAAATCCCGCCGTATC------AAACAAATGATACACGCAGAGGACAACCTAGCA
GTCTCGAAGCCGATCGAATCGCACATGGCCATGTA----TGACGATCGATCATGCATACATACCTGGATTCGGCTTGCCT
GCTCCCTCCCATGCTCCCATCCGTGCATCCACTCCATCTTACGGCTGTCTTTTTCTTTTTCTCTTTCTAATCTAATCATT
TCCCCTCCTGATTTTAAGGGAGTGGGAACGGGCCTTATTTTGTTCCAATCAAATCATGCCACGTATGCGGGAGCACGGAT
GGGCGCACGCCGAGAAGCAGGCAAGTCTCGTCCTACATACCTAAGCTATTACGCCGAACAGCTTGATCCCATGCAC--CA
CGCATCCATGCATATCACC-CGGCTATAAATACACCACTCTCTCCAAGCTCTCATGCATCCCAAACCCAAAG-CACT--A
---G---CTACATATCCTACTCAAGCACACGC------TCACGATGGCATCCAGAGCTGCTACCTTCGTCGCCCTGAGCC
TCCTC---TCCGCGGTCGCCACGCACGG-TGCGGAC---CCTACTGCCAGCCGCCAGTCGTCGTGCCGACGCCGCCCGTT
GTCGTTCCGACGCCATACCATGGAGGAGGAGCGCACGGCCACGG------CGGGCAGTGCTCCATCGACGCGCTAAAGCT
GAGGGCGTGCGCCAACGTTCTCGGCGGCCTGCTCGGCCTCAAGGTTGGCGTGCCGGCGCGCGACGAGTGCTGCCCGCTGC
TCCACGGGTTGGTCGACCTTGACGCCGCCGTCTGCCTCTGCACCGCCGTCAGGGCCAACGTCCTCGGCATCCACCTCGAC
GTGCCCGTGGACATCAGCCTCCTCCTCAACCACTGCGGCAAGACGTGCCCGTCCGAGTTCACTTGCCCAGCCCATTAACG
A--ACGCGTACTGTTGCAAC----TGCACGGGCGCCGCCCAATAAGATTTGCTTTTGGTCCGTACGTCGTTGTTATT---
---TT-CGTG--------------------TCCGCATTTGAATCGTTGTAACCAG------------------CACTACT
CTTTTTGTTTTTTGGCGAACAACCATGTGCTCTTCGTATT-GATATATATCATCAGTGAGCAATAAATATTGCTCTAGTT
AATTGCCCTTTTG--TTTTCTTTCTGAAACACAAGTACTGATC----TAGACGCGCGCGCGCACATACACATT-----GT
AGCTTCTTCATTTTTGAAAACTA---------------------------------------------------------
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>chr4B_306
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--------------------------------------------------------------------ATATTATTATGG
ACTCCACTACAAACCTGACTTCAGATTTTT----TACCATGGTAAATCAAACATTTTGAA-GACAAATAATGTTCTTCAA
GAATGATAAG--TTAGTTGACGAGCATGGCAAATGCACCCTGTTTATTCTTTTTAT-CAGAAAATTGTCGTGCTTTGCAA
ACTAAATTTGTCATAATCGCGCAATATAAATTGCCACGAAAAATGTTAGATTTATTGTGCCTAAAAATCTGACATCAATT
TTTTACTTTTTCTGATCAGTATTTCCTTGTCCAC----------------------------------GCTCACACGGCA
TGGC-TAT---TTCTCAACTTGCTTGTACAATCTTGTTCTTTTTACTCTAAAATATGTTGTGTGGCATGACAAGGTTGG-
----------CTAACATGGATGAACATGCAAGGGTATTGCTTAACTTGTTGCCGTAT----CTCCAGGATTAATATACCC
AAACCGTCAGTCCC-TGATCATGCTAAAATATTGCCGTATC------AAACAAATGATACACCCGGATGACAACCAAGCA
GTCTCGAAGCCGATCGAATTGCACATGGCCACGTA----TGA---TCGATCATGC-------------------------
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---------------------------------TACATACCTAAGCTACTACACCAAACAGTTCGATCCCATG-----CA
TGCACGCATCCATATCCCC-CGGCTATAAATACAACACTCTCTCCAAGCTCTCATGCATCCCAAACCCAAAG-CACT--A
---G---C----TATCCCACTCAAGCACACGC------TCACGATGACATCCAATGCTGCCATCTTCGTCGCCCTGAGCC
TCCTCCTCTCCGTCGTCGCCACGCACGGCTGCGGAC---CGTATTGCCAGCCGCCAGTCGTCGTGCCGACACCGCCCGTT
GTCGTTCCGCCGCCATACCACGGAGGAGGAGCGCACGACCACGG------CGGGCAGTGCTCTATCGACGCGCTAAAGCT
GCGGGTGTGTGCCAACGTTCTCGGCGGCCTGCTCGGCCTCAAGGTCGGCGTTCCGGCGCGCGACGAGTGCTG-CCGCTGC
TCCAGGGGTTGGTCGACCTTGACGCCATCGTCTGCCTCTGCACCGCCGTCAGGGCCAACGTCCTCGGCATCCACCTCGAC
GTACCTGTGGACATCAGCCTCCTCCTCAACCACTGTGGCAAGACATACCCGTCCGATTTCACTTGCCCAGGCCATTAACG
G--ACGCGTACTGCTGCACGTACGGGC---------GCCGACTAAGATTTGCTTTCGATCCGTGCTTCGTTGTCATT---
---TT-CGTGAGTTGTGGAACCGTTCCACTTTCACATTTGAATCCTTGTAACCAG------------------T------
-----TG-CTTTTGGCAAACAACGATGTACTCTTCTTATT-GATATATATCATCACTGCACAATCATTATTACTCTAGTT
AATTGCCCAAAATAATTATTTTTCTAAAGCACAGGTA-TGATTGATATAGATGCGCGTGCACACTCACATAAT-----GT
AGTTTCTTCATTTTTGTGAACT-----GATGATAT---ACACGTTGTTGCAGGAGCCATGCTAAAACAAATGTGTAAATA
GGTGTTTAAAAAAAACAAAAACA---------------------------------------------------------
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>chr1A_672
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----------------------------------------------TCTAAAATATGTTGTGTAGCATGACAAGGTATTG
CACTGTTTGCGTAACATGCATGAACATGCAAAGGTGTTGCTCAACTTGTTGCCATAT----CTCCAGAATTCATAAAG--
--------------CATATCATGCTTAAATCTTGTCTCATCTCTCCAAAACAAATGATACATCGAGAGGACAACCTAGCA
GTCTTGAAACCGATCGAATCACACATGGCCACGTC----TGA---TC----ATGCA------------------------
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---------------------------------TACATACGTAAGCTACTACGTCAAACAGCTCGACCCCATC--C--CA
TGCATGCATCCATATCACC-AGGCTATAAATACA--ACTCTCTCCAAGCTCTCTTGCATCCCAAACCCAAAG-CACTGGA
---GTAGC----TATATCATTCTAGCACACCCACACAATCACAATGGCACCCAGTGCTGCCCTCTTCATCGCCCTGAGCC
TCCTCCTCTCCGCCGTCGCCGCCCACGGCTGCGGAAGCACCTATTGCCAACCGCCGGTCGTCGTGCCGACACCACCCATC
GTCGTTCCGCCGCCATACCATGGAGGAGGAGGGCACGGCCACGGCCACGCCGGGCAGTGCTCCATCAACGTGCTCAACCT
GAGGGTGTGCGCCAACGTTCTCAGTGGACTGCTCGGCCTCAAGATCGGCGTTCCGGTGCACGACCAATGCTGCCCGCTGC
TCCAGGGGTTGGCCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCGTCAGGGCCAACATCCTCGGCCTCCACCTCAAC
GTGCCTGTGGACATCAGCCTCCTCCTCAACCACTGCGGCAAGAAGTGCCCGTCCGGTTTCACTTGCCCAGCCCATTAACA
G--AAGTACCGTTTTGC----ATGGGC---------GCCCAATAAGATTTGCTTTCCGTACTTCG-----------T---
---TTTCATGATGTGTGGAACTGTTCCACTCCCACATTTTAATTG-TGTAACCAGTACTACTACAGTATTTATT------
-----TA-TTTTTGGCAAACAAGCATGTACTCTTCATATT-GATAAATATCAACAGTGAGCAATAATTATTACTCTAGCT
AATTGTCC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr4A_702
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TGG-
----------TTAACATGGATGAACATGCAAGGGTATTGCTCAACTTGTTGCCGTAT----CTTCAGGAATAATATTCCA
AAACCATCAGT-CCCTGATCATGCTAAAATCCCGCCGTATC------AAACAAATGATACACCCAGAGGACAACCTAGCA
GTCTCCAAGCCGATCAAATCGCACATGGCCACGTA----TGA---TC----ATGCA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------CACATGCCTAATCGACTATGCCAAACAGTTCCATCCCATG-----CA
TGCACGCATCCAGATCCCC-CGGCTATAAATACAACACTCTCTC-AAGCTCTCATGCATCACAAACCCAAACCCAAAGCA
---CTGTC----TATCCTCCTCAAGCACACGC------TCACGATGGCATCCAGAGCTGCCATCTTCGTCACCCTGAGCC
TCCTCCTCTCCGCCGTCACCACGCACGGCTGCGGAC---CCTACTGCCAGCCGCCAGTCGTCGTGCCGACGCCGCCCATT
GTCGTTCCACCGCCATACCATGGAGGAGGAGCGCACGGCCACGG------CGGGCAGTGCTCCATCGACGCGCTAAAGCT
GAGGGTGTGCGTCAACGTTCTCGGCGGCCTGCTCGGCCTCAAGGTCAGCGTGCCGGCGCGCGACGAGTGCTGCCCGCTGC
TCCACGGGTTGGTCGACCTTGACGCCGTCATCTGCCTCTGCACCGCCGTCAGGGCCAACGTCCTCAGCATCCACCTCGAC
GTGCCTGTGGACATCAGCCTCCTCCTCAACCACTGCGGCAAGACGTGCCCGTCCGAGTTCACTTGCCCAGCCCATTAACG
G--ACGCGTACTGCTGCACGTACGGGC---------GCCCAATAAGATTTGCTTTCGATCCGTACGTCGTTGTTATT---
---TT-CGTG--------------------TCCACATTTGAATCCTTATAACCGG------------------TACTACT
CTTTTTGT------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr4D_705
--------------------------------------------------------------------------------
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----------CTAACATGGATGAACATGCAAGGTTATTGCTTAACTTGTTGCCTTAT----CTTCAGGATTAATATTCCA
AAACCATCAGT-CCCTGATCATGCTAAAATCTCGCCGTATC------AAACTAGTGATACACCCAGAGGACAACCTAGCA
GTCTCGAAGCCGATCGAATCGCACATGGCCACGTA----TGA---TC----ATGTA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------CACATGCCTAAGCGACTACG-CAAACAGTTCGATCCCATG-----CA
TGCACGCATCCATATCCCC-CGGCTATAAATACAACACTCTCTCCAAGCTCTCATGCATCCCAAACCAAAAG-CACT--A
GTAG---C----TATCCCACTCAAGCACACGC------TCACAATGACATCCAAAGCTGCCATCTTCGTCGCCCTGAGCA
TCGTCCTCTCCTCCGTCGCCGCGCACGGCTGCGGAC---CCTATTGCCAGCCGCCAGTCGTCGTGCCGACGCCGCCCGTT
GTTGTTCCGCCGCCGTACCATGGAGGAGGGGCGCACGGCCACGG------CGGGCAGTGCTCTATCGACGCGCTAAAGCT
GAGGGTGTGCGCCAATGTTCTCGGCGGCCTGCTCGGCCTCAAGGTCGGCGTTCCGGCGCGCGACGAGTGCTGCCCGCTGC
TCCAGGGGTTGGTCGACCTTGACGCCGCCGTCTGCCTCTGCACCGCCGTCAGGGCAAACGTACTCGGCATCCACCTCAAC
GTGCCTGTGGACATCAGCCTCCTCCTCAACCACTGCGGCAAGACGTGCCCGTCCGAGTTCACTTGCCCGGCCCATTAACG
G--ACGCGTACTGCT-C----ACTGGC---------GCCGAATAAGATTTGCTTTCGATCCGTACTCCGTTGTTATT---
---TTTCGTGAGTTGTGGAACCGTTCCGCTTCCACATTTGAATCCTTGTAACCAG------------------TACTACA
ACTATTG-TTTTTGGCAAACAACCATGTGAATTGATATTGAGATATATATCATCAGAGCGCAATCATTATTACTCTAGTT
AATTGCCCAAAATAATTATTTTTCCGAAGCACAAGTA-TGATG-----AGATGCGCGTGCACACA---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------
>chr1B_706
--------------------------------------------------------------------------------
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-----------TAACATGCATGAACGTGTAAGGGTGTTGCTCAACTTGTTGCCATAT----CTCCAGAATTGGTAAAG--
--------------CGTATCATGCTTAAATCTTGTCGTATCTCTCTAAAACAAATGATACATCGAGAGGACAACCTAGAA
GTCTTGAAACCGATCGAATCACACATGGCCACGTC----TGA---TC----ATGCA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TACATACGTAAGCTACTACGTCAAACAGCTCGATGCCATG-----CG
TGCATGCATCCATATCACC-AGGCTATAAATACAACACTCTCTCCAAGCTCTCATGCATCCCAAACCCAAAG-CACT--A
---G---C----TATATTACTCTAGCACG-CCACACAATCATAATGGCATCCAACACTGCCCTCTTCGTCGCCCTGAGCC
TTCTCCTCTCTGCCGTCGCCGCCCACGGCTGCGGAAGCACCTATTGCCAACCGCCGGCCGTCGTGCCGACACCAACCATC
GTCGTTCCGCCGCCATACCATGGAGGAGGAGGGCACGGCCACGGC---GCCGGGCAGTGCTCCATCAACGTGCTCAACCT
GAGGGTGTGCGCCAACGTTCTCGGCGGGCTGCTCCGCCTCAAGGTTGGCGTTCCGGCGCACGACCAGTGCTGCCCGCTGC
TCCAGGGGTTGGCCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCGTCAGGGCCAACATCCTCGGCCTCCACCTCAAC
GTGCCTGTGGACATCAGACTCCTCCTCAACCACTGCGGCAAGAAGTGCCCGTCTGGTTTCACTTGCCCAGCCCATTAACG
G--GCG--TACTGTTGC----ATGGGC---------GCCGAATAAGATTTGCTTTCCGTACTTTG-----------TCTT
TTATTTCATCAAATGTGGATCTAATCCACTCCCACATTTCAATTG-TGTAACCAG------------------TCCTGC-
-------TTATTTGGCAAACAAGTATGTACTCTTCGTATT-GATAAATATCATCAGTGAGCAATAATTATTACTCTAGCT
AATTGTCC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>chr4B_900
--------------------------------------------------------------------------------
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----------------------------------------CTAAGCGACTACG-CAAACAGTTCGATCCCATG-----CA
TGCACGCATCCATATCCCC-CGGCTATAAATACAGCACTCTCTCCAAGCTCTCATGCATCCCAAACCCAAAG-CACT--A
---GTAGC----TATCCCACTCAAGCACACCC------TCACGATGACATCCAAAGCTGCCATCTTCGTTGCCCTGTGCA
TCGTCCTCTCCTCCGTCGCCGTGCACGGCTGCGGAC---CTTATTGCCAGCCTCTAGTCGTTGTGCCGACGCCGCCCGTT
GTCGTTCCGCCGCCGTACCATGGAGGAGGAGCGCACGGCCACGG------CGGGCAGTGCTCTATAGACGCGCTAAAGCT
GCGGGTGTGTGCCAACGTTATCGGCGGCCTGCTCGGCCTCAAGGTCGGCGTTCCGGCGCGTGACGAGTGCTGCCCGCTGC
TCCATGGGTTGGTCGACCTTGATGCTGTTGTCTGCCTCTGCACCGCTGTCAGGGCTAACGTCCTCGGCATCCACCTCAAC
GTGCCTGTGGACATCAGCCTCCTCCTCAACCACTGCGGCAAGACGTGCCCGTCTGAGTTCACTAGCCCATTCCATTGACG
GACGCG--TACTGCTGC----ACGGGC---------GCCGAATAAGATTTGCTTTCAGAT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
---------S----------------S-S---------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------SS
SSSSS---S--------------S------------------------------------------------S-------
----------------------------------------------------------S----------S----------
----------S---------------------------------------------S---------------S-------
--------------------S--------------------------------S---------S----------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------SSSS-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------------------------------SS--
------------S------S------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------S---------------------------------------S---------------------------
-----------------------S-----------------------S--------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-------S----S-------------------------------------------------------------------
-------------------------------------------------S------------------------S-----
---S----------------------------------------------------------------------------
-------------S-----------------------------------------------------SS---SSSSSS--
---------S-----SS--SSSSSSSS-----S-S-S--SS---------S--S-----S-----------S--------
-----SSS----S--SS----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2403
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------TCACATGGAGGTAGGCA
GGT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_4667
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------TCCAGGTTGCAACAAGTGGT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
