Multiple sequence alignment - TraesCS4B01G286600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G286600 chr4B 100.000 3606 0 0 1 3606 570137452 570141057 0.000000e+00 6660.0
1 TraesCS4B01G286600 chr4B 98.214 56 1 0 3285 3340 570140679 570140734 8.240000e-17 99.0
2 TraesCS4B01G286600 chr4B 98.214 56 1 0 3228 3283 570140736 570140791 8.240000e-17 99.0
3 TraesCS4B01G286600 chr4B 77.966 177 20 10 521 694 570128951 570129111 3.830000e-15 93.5
4 TraesCS4B01G286600 chr4D 89.981 2625 124 58 296 2838 456046274 456048841 0.000000e+00 3262.0
5 TraesCS4B01G286600 chr4D 88.136 177 8 5 133 296 456046064 456046240 7.900000e-47 198.0
6 TraesCS4B01G286600 chr4D 79.227 207 12 13 2837 3042 456049003 456049179 8.180000e-22 115.0
7 TraesCS4B01G286600 chr4A 88.637 2737 160 76 348 3047 11679008 11676386 0.000000e+00 3192.0
8 TraesCS4B01G286600 chr4A 99.862 726 1 0 1 726 16831010 16831735 0.000000e+00 1336.0
9 TraesCS4B01G286600 chr4A 82.792 523 85 5 2055 2573 715639159 715638638 2.540000e-126 462.0
10 TraesCS4B01G286600 chr4A 81.453 523 92 5 2055 2573 715915232 715915753 1.200000e-114 424.0
11 TraesCS4B01G286600 chr4A 81.074 391 54 17 1112 1496 715912699 715913075 9.790000e-76 294.0
12 TraesCS4B01G286600 chr4A 81.053 380 54 13 1115 1491 715641599 715641235 1.640000e-73 287.0
13 TraesCS4B01G286600 chr4A 96.269 134 5 0 1 134 675153284 675153151 1.690000e-53 220.0
14 TraesCS4B01G286600 chr4A 96.269 134 5 0 1 134 675175833 675175700 1.690000e-53 220.0
15 TraesCS4B01G286600 chr4A 96.269 134 5 0 1 134 700679970 700680103 1.690000e-53 220.0
16 TraesCS4B01G286600 chr4A 80.488 164 10 8 133 296 11679254 11679113 4.920000e-19 106.0
17 TraesCS4B01G286600 chr4A 85.393 89 6 5 520 606 11681395 11681312 6.410000e-13 86.1
18 TraesCS4B01G286600 chr6D 82.609 368 64 0 1317 1684 97914623 97914256 3.470000e-85 326.0
19 TraesCS4B01G286600 chr6D 86.022 93 11 2 2955 3047 406618111 406618021 8.240000e-17 99.0
20 TraesCS4B01G286600 chr6B 82.656 369 62 2 1317 1684 182585980 182585613 3.470000e-85 326.0
21 TraesCS4B01G286600 chr6A 82.609 368 64 0 1317 1684 116913135 116912768 3.470000e-85 326.0
22 TraesCS4B01G286600 chr6A 89.744 78 4 3 3043 3117 578072426 578072350 2.960000e-16 97.1
23 TraesCS4B01G286600 chr7A 81.330 391 55 13 1123 1499 692523287 692522901 5.850000e-78 302.0
24 TraesCS4B01G286600 chr7A 89.552 134 9 4 3052 3182 12744615 12744484 8.010000e-37 165.0
25 TraesCS4B01G286600 chr7B 79.899 398 56 20 1123 1499 679930886 679930492 1.650000e-68 270.0
26 TraesCS4B01G286600 chr7B 95.556 135 5 1 1 134 589680118 589679984 7.840000e-52 215.0
27 TraesCS4B01G286600 chr3B 79.259 405 57 21 1114 1492 17988382 17988785 1.280000e-64 257.0
28 TraesCS4B01G286600 chr3B 87.647 170 21 0 1764 1933 17688523 17688354 7.900000e-47 198.0
29 TraesCS4B01G286600 chr3B 86.364 176 24 0 1317 1492 17783913 17783738 3.670000e-45 193.0
30 TraesCS4B01G286600 chr3B 85.311 177 26 0 1316 1492 17689080 17688904 2.210000e-42 183.0
31 TraesCS4B01G286600 chrUn 99.254 134 1 0 1 134 297367057 297367190 3.600000e-60 243.0
32 TraesCS4B01G286600 chrUn 99.254 134 1 0 1 134 331744019 331744152 3.600000e-60 243.0
33 TraesCS4B01G286600 chrUn 83.539 243 24 11 3052 3283 89527968 89528205 2.820000e-51 213.0
34 TraesCS4B01G286600 chr3A 95.556 135 6 0 1 135 688928834 688928700 2.180000e-52 217.0
35 TraesCS4B01G286600 chr1B 95.522 134 6 0 1 134 211997995 211998128 7.840000e-52 215.0
36 TraesCS4B01G286600 chr1B 89.437 142 11 4 3050 3187 624818363 624818222 3.700000e-40 176.0
37 TraesCS4B01G286600 chr2A 84.581 227 19 10 3065 3284 445771327 445771110 1.010000e-50 211.0
38 TraesCS4B01G286600 chr3D 87.500 176 22 0 1317 1492 12300250 12300075 1.700000e-48 204.0
39 TraesCS4B01G286600 chr3D 87.500 176 22 0 1317 1492 12374585 12374760 1.700000e-48 204.0
40 TraesCS4B01G286600 chr7D 89.916 119 12 0 1115 1233 17762538 17762420 1.730000e-33 154.0
41 TraesCS4B01G286600 chr7D 90.351 114 9 2 1124 1235 600748578 600748691 8.070000e-32 148.0
42 TraesCS4B01G286600 chr7D 91.667 72 5 1 2976 3047 619095178 619095108 8.240000e-17 99.0
43 TraesCS4B01G286600 chr2D 88.525 61 7 0 2987 3047 327751812 327751752 1.390000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G286600 chr4B 570137452 570141057 3605 False 2286.000000 6660 98.809333 1 3606 3 chr4B.!!$F2 3605
1 TraesCS4B01G286600 chr4D 456046064 456049179 3115 False 1191.666667 3262 85.781333 133 3042 3 chr4D.!!$F1 2909
2 TraesCS4B01G286600 chr4A 16831010 16831735 725 False 1336.000000 1336 99.862000 1 726 1 chr4A.!!$F1 725
3 TraesCS4B01G286600 chr4A 11676386 11681395 5009 True 1128.033333 3192 84.839333 133 3047 3 chr4A.!!$R3 2914
4 TraesCS4B01G286600 chr4A 715638638 715641599 2961 True 374.500000 462 81.922500 1115 2573 2 chr4A.!!$R4 1458
5 TraesCS4B01G286600 chr4A 715912699 715915753 3054 False 359.000000 424 81.263500 1112 2573 2 chr4A.!!$F3 1461

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
867 2984 0.392729 GAGCCACAGAAGAGCAGCAT 60.393 55.0 0.00 0.00 0.0 3.79 F
1581 5205 0.241481 ACTCCGTCGTGAAAGAGCTC 59.759 55.0 5.27 5.27 0.0 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1700 5324 0.032130 TCTAATCGACGAGCCCATGC 59.968 55.0 3.01 0.0 37.95 4.06 R
3554 7553 0.036765 TTCTCGGTTTACCATGCGCT 60.037 50.0 9.73 0.0 35.14 5.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 119 1.222300 TGTTAAGACGTGCGTTGCAT 58.778 45.000 0.00 0.00 41.91 3.96
764 2864 2.204291 TGCCCCATGGAACTCCCT 60.204 61.111 15.22 0.00 35.38 4.20
766 2866 2.276740 CCCCATGGAACTCCCTGC 59.723 66.667 15.22 0.00 35.38 4.85
768 2868 2.124570 CCATGGAACTCCCTGCCG 60.125 66.667 5.56 0.00 35.38 5.69
776 2876 4.016706 CTCCCTGCCGGTCCGTTT 62.017 66.667 11.06 0.00 0.00 3.60
839 2939 1.263217 CGCCTAACCACAGTTCACAAC 59.737 52.381 0.00 0.00 37.42 3.32
840 2940 2.572290 GCCTAACCACAGTTCACAACT 58.428 47.619 0.00 0.00 44.06 3.16
866 2983 1.004080 GAGCCACAGAAGAGCAGCA 60.004 57.895 0.00 0.00 0.00 4.41
867 2984 0.392729 GAGCCACAGAAGAGCAGCAT 60.393 55.000 0.00 0.00 0.00 3.79
877 2998 1.180907 AGAGCAGCATCAAGAGACGA 58.819 50.000 0.00 0.00 0.00 4.20
881 3002 1.140589 AGCATCAAGAGACGAGCGG 59.859 57.895 0.00 0.00 0.00 5.52
906 3027 1.690219 ATAAGGCAGCGACCTCCCAG 61.690 60.000 0.66 0.00 39.93 4.45
910 3031 2.759973 CAGCGACCTCCCAGGCTA 60.760 66.667 0.00 0.00 39.63 3.93
955 3093 0.457509 CAGCAGCTCTCCTGTACGTG 60.458 60.000 0.00 0.00 43.71 4.49
1074 3222 3.494254 ACCCTGAACCCCGTGCAA 61.494 61.111 0.00 0.00 0.00 4.08
1194 3342 4.241555 GTCCGCGGCATCATCCCT 62.242 66.667 23.51 0.00 0.00 4.20
1305 3460 3.507622 ACCAGTTCTAATGGCTTTCTTGC 59.492 43.478 0.00 0.00 41.87 4.01
1539 5163 4.444957 AGGAGCATGAGGGGGCCT 62.445 66.667 0.84 0.00 36.03 5.19
1572 5196 0.959372 AGTACCTCCACTCCGTCGTG 60.959 60.000 0.00 0.00 34.71 4.35
1581 5205 0.241481 ACTCCGTCGTGAAAGAGCTC 59.759 55.000 5.27 5.27 0.00 4.09
1592 5216 1.040339 AAAGAGCTCCTCGGCGAGAT 61.040 55.000 36.47 19.40 35.36 2.75
1700 5324 5.572896 ACGTACGTGCATCATCATACATATG 59.427 40.000 22.14 0.00 35.04 1.78
1706 5330 5.183014 GCATCATCATACATATGCATGGG 57.817 43.478 14.63 8.56 43.30 4.00
1707 5331 4.499188 GCATCATCATACATATGCATGGGC 60.499 45.833 14.63 8.26 43.30 5.36
1708 5332 4.579647 TCATCATACATATGCATGGGCT 57.420 40.909 14.63 0.00 41.91 5.19
1709 5333 4.520179 TCATCATACATATGCATGGGCTC 58.480 43.478 14.63 0.00 41.91 4.70
1710 5334 2.976589 TCATACATATGCATGGGCTCG 58.023 47.619 14.63 0.00 41.91 5.03
1714 5338 0.319813 CATATGCATGGGCTCGTCGA 60.320 55.000 10.16 0.00 41.91 4.20
1715 5339 0.610174 ATATGCATGGGCTCGTCGAT 59.390 50.000 10.16 0.00 41.91 3.59
1717 5341 0.392706 ATGCATGGGCTCGTCGATTA 59.607 50.000 0.00 0.00 41.91 1.75
1718 5342 0.249447 TGCATGGGCTCGTCGATTAG 60.249 55.000 0.00 0.00 41.91 1.73
1729 5353 5.921408 GGCTCGTCGATTAGATGTTATTTCT 59.079 40.000 0.00 0.00 37.18 2.52
1730 5354 6.088350 GGCTCGTCGATTAGATGTTATTTCTC 59.912 42.308 0.00 0.00 37.18 2.87
1732 5356 7.034685 TCGTCGATTAGATGTTATTTCTCCA 57.965 36.000 0.00 0.00 37.18 3.86
1733 5357 7.658261 TCGTCGATTAGATGTTATTTCTCCAT 58.342 34.615 0.00 0.00 37.18 3.41
1734 5358 7.595130 TCGTCGATTAGATGTTATTTCTCCATG 59.405 37.037 0.00 0.00 37.18 3.66
1738 5362 7.386025 CGATTAGATGTTATTTCTCCATGCTCA 59.614 37.037 0.00 0.00 0.00 4.26
1940 5572 6.280643 CAAACAATCCGGTGAGTGATAGATA 58.719 40.000 0.00 0.00 38.86 1.98
2030 5838 7.342026 TCCATCTACTACTGTGCTCTAATTTGA 59.658 37.037 0.00 0.00 0.00 2.69
2031 5839 8.147058 CCATCTACTACTGTGCTCTAATTTGAT 58.853 37.037 0.00 0.00 0.00 2.57
2249 6058 2.345991 GGCTCTACAACCACGGCA 59.654 61.111 0.00 0.00 0.00 5.69
2429 6238 0.670854 GAACCTCAACAGGCTCGTCC 60.671 60.000 0.00 0.00 45.05 4.79
2531 6343 0.457851 CACCAACGAGGAGGAGCTAG 59.542 60.000 5.70 0.00 41.22 3.42
2592 6404 2.487265 GGTTGCAGAAGAAGGGAGTCAA 60.487 50.000 0.00 0.00 0.00 3.18
2616 6428 4.095782 CGTCCCACAGTAAATAACATTGGG 59.904 45.833 7.45 7.45 46.79 4.12
2618 6430 5.013547 TCCCACAGTAAATAACATTGGGTG 58.986 41.667 11.67 0.00 46.07 4.61
2633 6455 5.827797 ACATTGGGTGGTTAATAGTAGCATG 59.172 40.000 0.00 0.00 0.00 4.06
2658 6480 6.345920 AGCTAAACTCACATTATTACGTGC 57.654 37.500 0.00 0.00 33.03 5.34
2733 6555 1.597742 TGAACTGCCAAAGCTCAGAC 58.402 50.000 7.12 2.32 40.80 3.51
2734 6556 1.141657 TGAACTGCCAAAGCTCAGACT 59.858 47.619 7.12 0.00 40.80 3.24
2736 6558 0.761187 ACTGCCAAAGCTCAGACTCA 59.239 50.000 7.12 0.00 40.80 3.41
2737 6559 1.155042 CTGCCAAAGCTCAGACTCAC 58.845 55.000 0.00 0.00 40.80 3.51
2739 6572 1.072806 TGCCAAAGCTCAGACTCACAT 59.927 47.619 0.00 0.00 40.80 3.21
2745 6578 3.380471 AGCTCAGACTCACATAGGTCT 57.620 47.619 0.00 0.00 42.67 3.85
2760 6593 6.655003 CACATAGGTCTGGAAACAAGTTGTAT 59.345 38.462 9.37 0.00 42.06 2.29
2854 6851 6.064717 GGATCCTAGAAAATACACATTGGCT 58.935 40.000 3.84 0.00 0.00 4.75
2899 6896 1.228124 TGAAACCCAGCCGTTCCTG 60.228 57.895 0.00 0.00 0.00 3.86
2900 6897 1.228154 GAAACCCAGCCGTTCCTGT 60.228 57.895 0.00 0.00 0.00 4.00
2912 6909 3.234630 TTCCTGTCCACCGCCGAAG 62.235 63.158 0.00 0.00 0.00 3.79
2916 6913 2.182030 GTCCACCGCCGAAGAGAG 59.818 66.667 0.00 0.00 0.00 3.20
2917 6914 3.760035 TCCACCGCCGAAGAGAGC 61.760 66.667 0.00 0.00 0.00 4.09
2918 6915 3.764466 CCACCGCCGAAGAGAGCT 61.764 66.667 0.00 0.00 0.00 4.09
2919 6916 2.507992 CACCGCCGAAGAGAGCTG 60.508 66.667 0.00 0.00 0.00 4.24
2920 6917 2.676822 ACCGCCGAAGAGAGCTGA 60.677 61.111 0.00 0.00 0.00 4.26
2921 6918 2.202676 CCGCCGAAGAGAGCTGAC 60.203 66.667 0.00 0.00 0.00 3.51
2922 6919 2.568612 CGCCGAAGAGAGCTGACA 59.431 61.111 0.00 0.00 0.00 3.58
2923 6920 1.140589 CGCCGAAGAGAGCTGACAT 59.859 57.895 0.00 0.00 0.00 3.06
2924 6921 1.144565 CGCCGAAGAGAGCTGACATG 61.145 60.000 0.00 0.00 0.00 3.21
2925 6922 1.427592 GCCGAAGAGAGCTGACATGC 61.428 60.000 0.00 0.00 0.00 4.06
2926 6923 0.108472 CCGAAGAGAGCTGACATGCA 60.108 55.000 0.00 0.00 34.99 3.96
2927 6924 1.673923 CCGAAGAGAGCTGACATGCAA 60.674 52.381 0.00 0.00 34.99 4.08
2928 6925 2.277969 CGAAGAGAGCTGACATGCAAT 58.722 47.619 0.00 0.00 34.99 3.56
2933 6930 2.352034 GAGAGCTGACATGCAATCACTG 59.648 50.000 0.00 0.00 34.99 3.66
2966 6963 7.074502 GCAAAATTTGGCATTCGTCATTTTAA 58.925 30.769 12.87 0.00 0.00 1.52
2975 6974 9.944663 TGGCATTCGTCATTTTAAGAATATAAC 57.055 29.630 0.00 0.00 32.70 1.89
2989 6988 6.121776 AGAATATAACCCTTGTGTGTGACA 57.878 37.500 0.00 0.00 0.00 3.58
3011 7010 5.819379 ACAAACATGCATAGGTAGTCATCAG 59.181 40.000 0.00 0.00 0.00 2.90
3050 7049 8.467402 CTTGTATATAAGGAACTCATTAGGCG 57.533 38.462 1.41 0.00 38.49 5.52
3051 7050 6.931838 TGTATATAAGGAACTCATTAGGCGG 58.068 40.000 0.00 0.00 38.49 6.13
3052 7051 6.722590 TGTATATAAGGAACTCATTAGGCGGA 59.277 38.462 0.00 0.00 38.49 5.54
3053 7052 6.681729 ATATAAGGAACTCATTAGGCGGAA 57.318 37.500 0.00 0.00 38.49 4.30
3054 7053 3.713826 AAGGAACTCATTAGGCGGAAA 57.286 42.857 0.00 0.00 38.49 3.13
3055 7054 3.933861 AGGAACTCATTAGGCGGAAAT 57.066 42.857 0.00 0.00 0.00 2.17
3056 7055 4.236527 AGGAACTCATTAGGCGGAAATT 57.763 40.909 0.00 0.00 0.00 1.82
3057 7056 4.200092 AGGAACTCATTAGGCGGAAATTC 58.800 43.478 0.00 0.00 0.00 2.17
3058 7057 3.945285 GGAACTCATTAGGCGGAAATTCA 59.055 43.478 0.00 0.00 0.00 2.57
3059 7058 4.398044 GGAACTCATTAGGCGGAAATTCAA 59.602 41.667 0.00 0.00 0.00 2.69
3060 7059 5.067805 GGAACTCATTAGGCGGAAATTCAAT 59.932 40.000 0.00 0.00 0.00 2.57
3061 7060 6.405842 GGAACTCATTAGGCGGAAATTCAATT 60.406 38.462 0.00 0.00 0.00 2.32
3062 7061 6.530019 ACTCATTAGGCGGAAATTCAATTT 57.470 33.333 0.00 0.00 34.64 1.82
3063 7062 6.332630 ACTCATTAGGCGGAAATTCAATTTG 58.667 36.000 0.00 0.00 31.47 2.32
3064 7063 5.659463 TCATTAGGCGGAAATTCAATTTGG 58.341 37.500 0.00 0.00 31.47 3.28
3065 7064 2.385013 AGGCGGAAATTCAATTTGGC 57.615 45.000 0.00 3.66 31.47 4.52
3066 7065 1.901833 AGGCGGAAATTCAATTTGGCT 59.098 42.857 0.00 1.80 32.19 4.75
3067 7066 2.094026 AGGCGGAAATTCAATTTGGCTC 60.094 45.455 0.00 0.00 29.08 4.70
3068 7067 2.270923 GCGGAAATTCAATTTGGCTCC 58.729 47.619 0.00 0.00 31.47 4.70
3069 7068 2.892374 CGGAAATTCAATTTGGCTCCC 58.108 47.619 0.00 0.00 31.47 4.30
3070 7069 2.735126 CGGAAATTCAATTTGGCTCCCG 60.735 50.000 0.00 2.88 31.47 5.14
3071 7070 2.418609 GGAAATTCAATTTGGCTCCCGG 60.419 50.000 0.00 0.00 31.47 5.73
3072 7071 1.194218 AATTCAATTTGGCTCCCGGG 58.806 50.000 16.85 16.85 0.00 5.73
3073 7072 1.329913 ATTCAATTTGGCTCCCGGGC 61.330 55.000 18.49 4.47 41.27 6.13
3080 7079 3.816090 GGCTCCCGGGCCCAAATA 61.816 66.667 24.92 2.33 45.92 1.40
3081 7080 2.520968 GCTCCCGGGCCCAAATAT 59.479 61.111 24.92 0.00 0.00 1.28
3082 7081 1.152546 GCTCCCGGGCCCAAATATT 60.153 57.895 24.92 0.00 0.00 1.28
3083 7082 0.759060 GCTCCCGGGCCCAAATATTT 60.759 55.000 24.92 0.00 0.00 1.40
3084 7083 1.788229 CTCCCGGGCCCAAATATTTT 58.212 50.000 24.92 0.00 0.00 1.82
3085 7084 2.115427 CTCCCGGGCCCAAATATTTTT 58.885 47.619 24.92 0.00 0.00 1.94
3143 7142 5.772521 GTGATTTTAGTCACACCAAATGCT 58.227 37.500 2.40 0.00 46.04 3.79
3144 7143 6.908825 GTGATTTTAGTCACACCAAATGCTA 58.091 36.000 2.40 0.00 46.04 3.49
3145 7144 6.801862 GTGATTTTAGTCACACCAAATGCTAC 59.198 38.462 2.40 0.00 46.04 3.58
3146 7145 6.488344 TGATTTTAGTCACACCAAATGCTACA 59.512 34.615 0.00 0.00 0.00 2.74
3147 7146 6.892658 TTTTAGTCACACCAAATGCTACAT 57.107 33.333 0.00 0.00 0.00 2.29
3148 7147 5.878332 TTAGTCACACCAAATGCTACATG 57.122 39.130 0.00 0.00 0.00 3.21
3149 7148 2.489329 AGTCACACCAAATGCTACATGC 59.511 45.455 0.00 0.00 43.25 4.06
3164 7163 6.479095 GCTACATGCAAATTTTAAGGCAAA 57.521 33.333 5.17 0.00 40.02 3.68
3165 7164 6.896969 GCTACATGCAAATTTTAAGGCAAAA 58.103 32.000 5.17 0.00 40.02 2.44
3166 7165 7.358830 GCTACATGCAAATTTTAAGGCAAAAA 58.641 30.769 5.17 1.05 39.41 1.94
3167 7166 7.534918 GCTACATGCAAATTTTAAGGCAAAAAG 59.465 33.333 5.17 4.61 39.41 2.27
3168 7167 6.737118 ACATGCAAATTTTAAGGCAAAAAGG 58.263 32.000 5.17 0.00 39.51 3.11
3169 7168 6.320926 ACATGCAAATTTTAAGGCAAAAAGGT 59.679 30.769 5.17 0.00 39.51 3.50
3170 7169 6.765915 TGCAAATTTTAAGGCAAAAAGGTT 57.234 29.167 0.00 0.00 39.51 3.50
3171 7170 7.865706 TGCAAATTTTAAGGCAAAAAGGTTA 57.134 28.000 0.00 0.00 39.51 2.85
3172 7171 8.281212 TGCAAATTTTAAGGCAAAAAGGTTAA 57.719 26.923 0.00 0.00 39.51 2.01
3173 7172 8.401709 TGCAAATTTTAAGGCAAAAAGGTTAAG 58.598 29.630 0.00 0.00 39.51 1.85
3174 7173 7.378461 GCAAATTTTAAGGCAAAAAGGTTAAGC 59.622 33.333 0.00 0.00 39.51 3.09
3175 7174 8.401709 CAAATTTTAAGGCAAAAAGGTTAAGCA 58.598 29.630 7.52 0.00 39.51 3.91
3176 7175 6.912203 TTTTAAGGCAAAAAGGTTAAGCAC 57.088 33.333 7.52 0.00 33.14 4.40
3177 7176 5.862678 TTAAGGCAAAAAGGTTAAGCACT 57.137 34.783 7.52 0.00 0.00 4.40
3178 7177 4.753516 AAGGCAAAAAGGTTAAGCACTT 57.246 36.364 7.52 0.00 0.00 3.16
3179 7178 4.753516 AGGCAAAAAGGTTAAGCACTTT 57.246 36.364 7.52 3.42 38.48 2.66
3180 7179 4.441792 AGGCAAAAAGGTTAAGCACTTTG 58.558 39.130 19.29 19.29 37.04 2.77
3181 7180 3.559655 GGCAAAAAGGTTAAGCACTTTGG 59.440 43.478 22.38 13.94 37.04 3.28
3182 7181 3.002246 GCAAAAAGGTTAAGCACTTTGGC 59.998 43.478 22.38 17.99 37.04 4.52
3183 7182 3.469008 AAAAGGTTAAGCACTTTGGCC 57.531 42.857 7.52 0.00 37.04 5.36
3184 7183 2.381752 AAGGTTAAGCACTTTGGCCT 57.618 45.000 3.32 0.00 0.00 5.19
3185 7184 1.620822 AGGTTAAGCACTTTGGCCTG 58.379 50.000 3.32 0.00 0.00 4.85
3186 7185 1.133482 AGGTTAAGCACTTTGGCCTGT 60.133 47.619 3.32 0.00 0.00 4.00
3187 7186 1.000274 GGTTAAGCACTTTGGCCTGTG 60.000 52.381 16.15 16.15 37.26 3.66
3191 7190 3.524014 CACTTTGGCCTGTGCACA 58.476 55.556 20.37 20.37 40.13 4.57
3192 7191 1.815196 CACTTTGGCCTGTGCACAA 59.185 52.632 21.98 2.34 40.13 3.33
3193 7192 0.175302 CACTTTGGCCTGTGCACAAA 59.825 50.000 21.98 9.40 40.13 2.83
3194 7193 0.901124 ACTTTGGCCTGTGCACAAAA 59.099 45.000 21.98 16.50 37.27 2.44
3195 7194 1.277557 ACTTTGGCCTGTGCACAAAAA 59.722 42.857 21.98 16.42 37.27 1.94
3231 7230 8.432110 GACCAAATGTCACCTAAATTTGTTTT 57.568 30.769 0.00 0.00 43.85 2.43
3232 7231 8.800370 ACCAAATGTCACCTAAATTTGTTTTT 57.200 26.923 0.00 0.00 38.87 1.94
3251 7250 5.646577 TTTTTCTTTTCCCAGACGAAACA 57.353 34.783 0.00 0.00 31.57 2.83
3252 7251 4.625972 TTTCTTTTCCCAGACGAAACAC 57.374 40.909 0.00 0.00 31.57 3.32
3253 7252 3.553828 TCTTTTCCCAGACGAAACACT 57.446 42.857 0.00 0.00 31.57 3.55
3254 7253 4.675976 TCTTTTCCCAGACGAAACACTA 57.324 40.909 0.00 0.00 31.57 2.74
3255 7254 4.374399 TCTTTTCCCAGACGAAACACTAC 58.626 43.478 0.00 0.00 31.57 2.73
3256 7255 2.825861 TTCCCAGACGAAACACTACC 57.174 50.000 0.00 0.00 0.00 3.18
3257 7256 1.707106 TCCCAGACGAAACACTACCA 58.293 50.000 0.00 0.00 0.00 3.25
3258 7257 1.342174 TCCCAGACGAAACACTACCAC 59.658 52.381 0.00 0.00 0.00 4.16
3259 7258 1.343465 CCCAGACGAAACACTACCACT 59.657 52.381 0.00 0.00 0.00 4.00
3260 7259 2.609737 CCCAGACGAAACACTACCACTC 60.610 54.545 0.00 0.00 0.00 3.51
3261 7260 2.609737 CCAGACGAAACACTACCACTCC 60.610 54.545 0.00 0.00 0.00 3.85
3262 7261 2.035449 CAGACGAAACACTACCACTCCA 59.965 50.000 0.00 0.00 0.00 3.86
3263 7262 2.897969 AGACGAAACACTACCACTCCAT 59.102 45.455 0.00 0.00 0.00 3.41
3264 7263 3.323979 AGACGAAACACTACCACTCCATT 59.676 43.478 0.00 0.00 0.00 3.16
3265 7264 4.062991 GACGAAACACTACCACTCCATTT 58.937 43.478 0.00 0.00 0.00 2.32
3266 7265 4.062991 ACGAAACACTACCACTCCATTTC 58.937 43.478 0.00 0.00 0.00 2.17
3267 7266 3.122948 CGAAACACTACCACTCCATTTCG 59.877 47.826 0.00 0.00 40.38 3.46
3268 7267 2.094762 ACACTACCACTCCATTTCGC 57.905 50.000 0.00 0.00 0.00 4.70
3269 7268 1.346395 ACACTACCACTCCATTTCGCA 59.654 47.619 0.00 0.00 0.00 5.10
3270 7269 2.027192 ACACTACCACTCCATTTCGCAT 60.027 45.455 0.00 0.00 0.00 4.73
3271 7270 3.196901 ACACTACCACTCCATTTCGCATA 59.803 43.478 0.00 0.00 0.00 3.14
3272 7271 4.188462 CACTACCACTCCATTTCGCATAA 58.812 43.478 0.00 0.00 0.00 1.90
3273 7272 4.634004 CACTACCACTCCATTTCGCATAAA 59.366 41.667 0.00 0.00 0.00 1.40
3274 7273 5.296780 CACTACCACTCCATTTCGCATAAAT 59.703 40.000 0.00 0.00 0.00 1.40
3275 7274 5.885912 ACTACCACTCCATTTCGCATAAATT 59.114 36.000 0.00 0.00 0.00 1.82
3276 7275 5.659440 ACCACTCCATTTCGCATAAATTT 57.341 34.783 0.00 0.00 0.00 1.82
3277 7276 5.410067 ACCACTCCATTTCGCATAAATTTG 58.590 37.500 0.00 0.00 0.00 2.32
3278 7277 5.047377 ACCACTCCATTTCGCATAAATTTGT 60.047 36.000 0.00 0.00 0.00 2.83
3279 7278 5.516339 CCACTCCATTTCGCATAAATTTGTC 59.484 40.000 0.00 0.00 0.00 3.18
3280 7279 6.092092 CACTCCATTTCGCATAAATTTGTCA 58.908 36.000 0.00 0.00 0.00 3.58
3281 7280 6.585702 CACTCCATTTCGCATAAATTTGTCAA 59.414 34.615 0.00 0.00 0.00 3.18
3282 7281 6.808212 ACTCCATTTCGCATAAATTTGTCAAG 59.192 34.615 0.00 0.00 0.00 3.02
3283 7282 5.576384 TCCATTTCGCATAAATTTGTCAAGC 59.424 36.000 0.00 0.00 0.00 4.01
3284 7283 5.474545 CATTTCGCATAAATTTGTCAAGCG 58.525 37.500 10.55 10.55 44.45 4.68
3285 7284 3.822594 TCGCATAAATTTGTCAAGCGT 57.177 38.095 14.60 0.00 43.63 5.07
3286 7285 4.153958 TCGCATAAATTTGTCAAGCGTT 57.846 36.364 14.60 0.26 43.63 4.84
3287 7286 4.541779 TCGCATAAATTTGTCAAGCGTTT 58.458 34.783 14.60 6.32 43.63 3.60
3288 7287 4.979197 TCGCATAAATTTGTCAAGCGTTTT 59.021 33.333 14.60 3.48 43.63 2.43
3289 7288 5.460419 TCGCATAAATTTGTCAAGCGTTTTT 59.540 32.000 14.60 1.57 43.63 1.94
3309 7308 6.921332 TTTTTCTTTTCACAGACGAAACAC 57.079 33.333 0.00 0.00 34.68 3.32
3310 7309 5.873179 TTTCTTTTCACAGACGAAACACT 57.127 34.783 0.00 0.00 34.68 3.55
3311 7310 6.971527 TTTCTTTTCACAGACGAAACACTA 57.028 33.333 0.00 0.00 34.68 2.74
3312 7311 5.961395 TCTTTTCACAGACGAAACACTAC 57.039 39.130 0.00 0.00 34.68 2.73
3313 7312 4.807304 TCTTTTCACAGACGAAACACTACC 59.193 41.667 0.00 0.00 34.68 3.18
3314 7313 3.804786 TTCACAGACGAAACACTACCA 57.195 42.857 0.00 0.00 0.00 3.25
3315 7314 3.088194 TCACAGACGAAACACTACCAC 57.912 47.619 0.00 0.00 0.00 4.16
3316 7315 2.691526 TCACAGACGAAACACTACCACT 59.308 45.455 0.00 0.00 0.00 4.00
3317 7316 3.050619 CACAGACGAAACACTACCACTC 58.949 50.000 0.00 0.00 0.00 3.51
3318 7317 2.035576 ACAGACGAAACACTACCACTCC 59.964 50.000 0.00 0.00 0.00 3.85
3319 7318 2.035449 CAGACGAAACACTACCACTCCA 59.965 50.000 0.00 0.00 0.00 3.86
3320 7319 2.897969 AGACGAAACACTACCACTCCAT 59.102 45.455 0.00 0.00 0.00 3.41
3321 7320 3.323979 AGACGAAACACTACCACTCCATT 59.676 43.478 0.00 0.00 0.00 3.16
3322 7321 4.062991 GACGAAACACTACCACTCCATTT 58.937 43.478 0.00 0.00 0.00 2.32
3323 7322 4.062991 ACGAAACACTACCACTCCATTTC 58.937 43.478 0.00 0.00 0.00 2.17
3324 7323 3.122948 CGAAACACTACCACTCCATTTCG 59.877 47.826 0.00 0.00 40.38 3.46
3325 7324 2.094762 ACACTACCACTCCATTTCGC 57.905 50.000 0.00 0.00 0.00 4.70
3326 7325 1.346395 ACACTACCACTCCATTTCGCA 59.654 47.619 0.00 0.00 0.00 5.10
3327 7326 2.027192 ACACTACCACTCCATTTCGCAT 60.027 45.455 0.00 0.00 0.00 4.73
3328 7327 3.196901 ACACTACCACTCCATTTCGCATA 59.803 43.478 0.00 0.00 0.00 3.14
3329 7328 4.188462 CACTACCACTCCATTTCGCATAA 58.812 43.478 0.00 0.00 0.00 1.90
3330 7329 4.634004 CACTACCACTCCATTTCGCATAAA 59.366 41.667 0.00 0.00 0.00 1.40
3331 7330 5.296780 CACTACCACTCCATTTCGCATAAAT 59.703 40.000 0.00 0.00 0.00 1.40
3332 7331 5.885912 ACTACCACTCCATTTCGCATAAATT 59.114 36.000 0.00 0.00 0.00 1.82
3333 7332 5.659440 ACCACTCCATTTCGCATAAATTT 57.341 34.783 0.00 0.00 0.00 1.82
3334 7333 5.410067 ACCACTCCATTTCGCATAAATTTG 58.590 37.500 0.00 0.00 0.00 2.32
3335 7334 5.047377 ACCACTCCATTTCGCATAAATTTGT 60.047 36.000 0.00 0.00 0.00 2.83
3336 7335 5.516339 CCACTCCATTTCGCATAAATTTGTC 59.484 40.000 0.00 0.00 0.00 3.18
3337 7336 6.092092 CACTCCATTTCGCATAAATTTGTCA 58.908 36.000 0.00 0.00 0.00 3.58
3338 7337 6.585702 CACTCCATTTCGCATAAATTTGTCAA 59.414 34.615 0.00 0.00 0.00 3.18
3339 7338 6.808212 ACTCCATTTCGCATAAATTTGTCAAG 59.192 34.615 0.00 0.00 0.00 3.02
3340 7339 6.686630 TCCATTTCGCATAAATTTGTCAAGT 58.313 32.000 0.00 0.00 0.00 3.16
3341 7340 7.821652 TCCATTTCGCATAAATTTGTCAAGTA 58.178 30.769 0.00 0.00 0.00 2.24
3342 7341 8.465999 TCCATTTCGCATAAATTTGTCAAGTAT 58.534 29.630 0.00 0.00 0.00 2.12
3343 7342 8.533965 CCATTTCGCATAAATTTGTCAAGTATG 58.466 33.333 0.00 0.00 0.00 2.39
3344 7343 7.504922 TTTCGCATAAATTTGTCAAGTATGC 57.495 32.000 18.78 18.78 36.46 3.14
3345 7344 6.435430 TCGCATAAATTTGTCAAGTATGCT 57.565 33.333 22.48 0.00 37.33 3.79
3346 7345 6.851609 TCGCATAAATTTGTCAAGTATGCTT 58.148 32.000 22.48 0.00 37.33 3.91
3353 7352 4.651317 CAAGTATGCTTGCGACGC 57.349 55.556 14.19 14.19 44.54 5.19
3354 7353 2.081526 CAAGTATGCTTGCGACGCT 58.918 52.632 22.08 2.17 44.54 5.07
3355 7354 1.277326 CAAGTATGCTTGCGACGCTA 58.723 50.000 22.08 13.01 44.54 4.26
3356 7355 1.658596 CAAGTATGCTTGCGACGCTAA 59.341 47.619 22.08 12.33 44.54 3.09
3357 7356 1.278238 AGTATGCTTGCGACGCTAAC 58.722 50.000 22.08 9.66 0.00 2.34
3358 7357 0.996462 GTATGCTTGCGACGCTAACA 59.004 50.000 22.08 15.51 0.00 2.41
3359 7358 1.593006 GTATGCTTGCGACGCTAACAT 59.407 47.619 22.08 21.17 0.00 2.71
3360 7359 0.652592 ATGCTTGCGACGCTAACATC 59.347 50.000 22.08 4.94 0.00 3.06
3361 7360 0.389817 TGCTTGCGACGCTAACATCT 60.390 50.000 22.08 0.00 0.00 2.90
3362 7361 1.135228 TGCTTGCGACGCTAACATCTA 60.135 47.619 22.08 0.00 0.00 1.98
3363 7362 1.255600 GCTTGCGACGCTAACATCTAC 59.744 52.381 22.08 0.00 0.00 2.59
3364 7363 2.526077 CTTGCGACGCTAACATCTACA 58.474 47.619 22.08 0.00 0.00 2.74
3365 7364 2.640346 TGCGACGCTAACATCTACAA 57.360 45.000 22.08 0.00 0.00 2.41
3366 7365 2.256174 TGCGACGCTAACATCTACAAC 58.744 47.619 22.08 0.00 0.00 3.32
3367 7366 2.256174 GCGACGCTAACATCTACAACA 58.744 47.619 13.73 0.00 0.00 3.33
3368 7367 2.664568 GCGACGCTAACATCTACAACAA 59.335 45.455 13.73 0.00 0.00 2.83
3369 7368 3.122278 GCGACGCTAACATCTACAACAAA 59.878 43.478 13.73 0.00 0.00 2.83
3370 7369 4.201685 GCGACGCTAACATCTACAACAAAT 60.202 41.667 13.73 0.00 0.00 2.32
3371 7370 5.005012 GCGACGCTAACATCTACAACAAATA 59.995 40.000 13.73 0.00 0.00 1.40
3372 7371 6.292168 GCGACGCTAACATCTACAACAAATAT 60.292 38.462 13.73 0.00 0.00 1.28
3373 7372 7.618442 CGACGCTAACATCTACAACAAATATT 58.382 34.615 0.00 0.00 0.00 1.28
3374 7373 7.787935 CGACGCTAACATCTACAACAAATATTC 59.212 37.037 0.00 0.00 0.00 1.75
3375 7374 8.487313 ACGCTAACATCTACAACAAATATTCA 57.513 30.769 0.00 0.00 0.00 2.57
3376 7375 8.604035 ACGCTAACATCTACAACAAATATTCAG 58.396 33.333 0.00 0.00 0.00 3.02
3377 7376 8.817100 CGCTAACATCTACAACAAATATTCAGA 58.183 33.333 0.00 0.00 0.00 3.27
3412 7411 4.354893 TTTTGTTACCCACTCGGTATGT 57.645 40.909 0.00 0.00 46.85 2.29
3413 7412 4.354893 TTTGTTACCCACTCGGTATGTT 57.645 40.909 0.00 0.00 46.85 2.71
3414 7413 4.354893 TTGTTACCCACTCGGTATGTTT 57.645 40.909 0.00 0.00 46.85 2.83
3415 7414 3.666274 TGTTACCCACTCGGTATGTTTG 58.334 45.455 0.00 0.00 46.85 2.93
3416 7415 2.389962 TACCCACTCGGTATGTTTGC 57.610 50.000 0.00 0.00 45.97 3.68
3417 7416 0.690762 ACCCACTCGGTATGTTTGCT 59.309 50.000 0.00 0.00 45.97 3.91
3418 7417 1.086696 CCCACTCGGTATGTTTGCTG 58.913 55.000 0.00 0.00 0.00 4.41
3419 7418 1.610624 CCCACTCGGTATGTTTGCTGT 60.611 52.381 0.00 0.00 0.00 4.40
3420 7419 2.354303 CCCACTCGGTATGTTTGCTGTA 60.354 50.000 0.00 0.00 0.00 2.74
3421 7420 2.671396 CCACTCGGTATGTTTGCTGTAC 59.329 50.000 0.00 0.00 0.00 2.90
3422 7421 2.671396 CACTCGGTATGTTTGCTGTACC 59.329 50.000 0.00 0.00 35.59 3.34
3423 7422 2.300723 ACTCGGTATGTTTGCTGTACCA 59.699 45.455 0.00 0.00 38.18 3.25
3424 7423 3.244284 ACTCGGTATGTTTGCTGTACCAA 60.244 43.478 0.00 0.00 38.18 3.67
3425 7424 3.331150 TCGGTATGTTTGCTGTACCAAG 58.669 45.455 0.00 0.00 38.18 3.61
3426 7425 3.007074 TCGGTATGTTTGCTGTACCAAGA 59.993 43.478 0.00 0.00 38.18 3.02
3427 7426 3.938963 CGGTATGTTTGCTGTACCAAGAT 59.061 43.478 0.00 0.00 38.18 2.40
3428 7427 4.201812 CGGTATGTTTGCTGTACCAAGATG 60.202 45.833 0.00 0.00 38.18 2.90
3429 7428 4.700213 GGTATGTTTGCTGTACCAAGATGT 59.300 41.667 0.00 0.00 38.18 3.06
3430 7429 5.878116 GGTATGTTTGCTGTACCAAGATGTA 59.122 40.000 0.00 0.00 38.18 2.29
3431 7430 5.880054 ATGTTTGCTGTACCAAGATGTAC 57.120 39.130 0.00 0.00 41.18 2.90
3432 7431 4.069304 TGTTTGCTGTACCAAGATGTACC 58.931 43.478 0.00 0.00 40.29 3.34
3433 7432 4.069304 GTTTGCTGTACCAAGATGTACCA 58.931 43.478 0.00 0.00 40.29 3.25
3434 7433 4.359434 TTGCTGTACCAAGATGTACCAA 57.641 40.909 0.00 0.00 40.29 3.67
3435 7434 4.568072 TGCTGTACCAAGATGTACCAAT 57.432 40.909 0.00 0.00 40.29 3.16
3436 7435 5.685520 TGCTGTACCAAGATGTACCAATA 57.314 39.130 0.00 0.00 40.29 1.90
3437 7436 6.056090 TGCTGTACCAAGATGTACCAATAA 57.944 37.500 0.00 0.00 40.29 1.40
3438 7437 5.878116 TGCTGTACCAAGATGTACCAATAAC 59.122 40.000 0.00 0.00 40.29 1.89
3439 7438 5.878116 GCTGTACCAAGATGTACCAATAACA 59.122 40.000 0.00 0.00 40.29 2.41
3440 7439 6.373216 GCTGTACCAAGATGTACCAATAACAA 59.627 38.462 0.00 0.00 40.29 2.83
3441 7440 7.067008 GCTGTACCAAGATGTACCAATAACAAT 59.933 37.037 0.00 0.00 40.29 2.71
3442 7441 9.607988 CTGTACCAAGATGTACCAATAACAATA 57.392 33.333 0.00 0.00 40.29 1.90
3443 7442 9.961264 TGTACCAAGATGTACCAATAACAATAA 57.039 29.630 0.00 0.00 40.29 1.40
3446 7445 9.528489 ACCAAGATGTACCAATAACAATAAGTT 57.472 29.630 0.00 0.00 44.27 2.66
3447 7446 9.787532 CCAAGATGTACCAATAACAATAAGTTG 57.212 33.333 0.00 0.00 41.50 3.16
3452 7451 9.747898 ATGTACCAATAACAATAAGTTGAAGGA 57.252 29.630 0.00 0.00 41.50 3.36
3453 7452 9.747898 TGTACCAATAACAATAAGTTGAAGGAT 57.252 29.630 0.00 0.00 41.50 3.24
3455 7454 8.066612 ACCAATAACAATAAGTTGAAGGATGG 57.933 34.615 0.00 0.00 41.50 3.51
3456 7455 7.124147 ACCAATAACAATAAGTTGAAGGATGGG 59.876 37.037 0.00 0.00 41.50 4.00
3457 7456 7.341769 CCAATAACAATAAGTTGAAGGATGGGA 59.658 37.037 0.00 0.00 41.50 4.37
3458 7457 8.408601 CAATAACAATAAGTTGAAGGATGGGAG 58.591 37.037 0.00 0.00 41.50 4.30
3459 7458 5.779241 ACAATAAGTTGAAGGATGGGAGA 57.221 39.130 0.00 0.00 38.71 3.71
3460 7459 6.332976 ACAATAAGTTGAAGGATGGGAGAT 57.667 37.500 0.00 0.00 38.71 2.75
3461 7460 7.451731 ACAATAAGTTGAAGGATGGGAGATA 57.548 36.000 0.00 0.00 38.71 1.98
3462 7461 7.512992 ACAATAAGTTGAAGGATGGGAGATAG 58.487 38.462 0.00 0.00 38.71 2.08
3463 7462 6.694445 ATAAGTTGAAGGATGGGAGATAGG 57.306 41.667 0.00 0.00 0.00 2.57
3464 7463 3.321950 AGTTGAAGGATGGGAGATAGGG 58.678 50.000 0.00 0.00 0.00 3.53
3465 7464 3.049344 GTTGAAGGATGGGAGATAGGGT 58.951 50.000 0.00 0.00 0.00 4.34
3466 7465 2.694397 TGAAGGATGGGAGATAGGGTG 58.306 52.381 0.00 0.00 0.00 4.61
3467 7466 1.981495 GAAGGATGGGAGATAGGGTGG 59.019 57.143 0.00 0.00 0.00 4.61
3468 7467 1.255033 AGGATGGGAGATAGGGTGGA 58.745 55.000 0.00 0.00 0.00 4.02
3469 7468 1.132689 AGGATGGGAGATAGGGTGGAC 60.133 57.143 0.00 0.00 0.00 4.02
3470 7469 0.969894 GATGGGAGATAGGGTGGACG 59.030 60.000 0.00 0.00 0.00 4.79
3471 7470 0.561184 ATGGGAGATAGGGTGGACGA 59.439 55.000 0.00 0.00 0.00 4.20
3472 7471 0.106167 TGGGAGATAGGGTGGACGAG 60.106 60.000 0.00 0.00 0.00 4.18
3473 7472 0.828343 GGGAGATAGGGTGGACGAGG 60.828 65.000 0.00 0.00 0.00 4.63
3474 7473 0.185416 GGAGATAGGGTGGACGAGGA 59.815 60.000 0.00 0.00 0.00 3.71
3475 7474 1.203075 GGAGATAGGGTGGACGAGGAT 60.203 57.143 0.00 0.00 0.00 3.24
3476 7475 2.164338 GAGATAGGGTGGACGAGGATC 58.836 57.143 0.00 0.00 0.00 3.36
3477 7476 1.499438 AGATAGGGTGGACGAGGATCA 59.501 52.381 0.00 0.00 33.17 2.92
3478 7477 2.091278 AGATAGGGTGGACGAGGATCAA 60.091 50.000 0.00 0.00 33.17 2.57
3479 7478 1.776662 TAGGGTGGACGAGGATCAAG 58.223 55.000 0.00 0.00 33.17 3.02
3480 7479 0.041238 AGGGTGGACGAGGATCAAGA 59.959 55.000 0.00 0.00 33.17 3.02
3481 7480 0.175989 GGGTGGACGAGGATCAAGAC 59.824 60.000 0.00 0.00 33.17 3.01
3482 7481 0.179134 GGTGGACGAGGATCAAGACG 60.179 60.000 0.00 0.00 33.17 4.18
3483 7482 0.802607 GTGGACGAGGATCAAGACGC 60.803 60.000 0.00 0.00 33.17 5.19
3484 7483 1.586564 GGACGAGGATCAAGACGCG 60.587 63.158 3.53 3.53 33.17 6.01
3485 7484 1.586564 GACGAGGATCAAGACGCGG 60.587 63.158 12.47 0.00 33.17 6.46
3486 7485 2.267681 GACGAGGATCAAGACGCGGT 62.268 60.000 12.47 0.00 33.17 5.68
3487 7486 1.028330 ACGAGGATCAAGACGCGGTA 61.028 55.000 12.47 0.00 33.17 4.02
3488 7487 0.099968 CGAGGATCAAGACGCGGTAA 59.900 55.000 12.47 0.00 33.17 2.85
3489 7488 1.841450 GAGGATCAAGACGCGGTAAG 58.159 55.000 12.47 0.00 33.17 2.34
3490 7489 0.460311 AGGATCAAGACGCGGTAAGG 59.540 55.000 12.47 0.00 0.00 2.69
3491 7490 0.529992 GGATCAAGACGCGGTAAGGG 60.530 60.000 12.47 0.00 38.93 3.95
3492 7491 1.152383 GATCAAGACGCGGTAAGGGC 61.152 60.000 12.47 0.00 36.05 5.19
3501 7500 3.787001 GGTAAGGGCGAGGCAGCT 61.787 66.667 5.04 0.00 37.29 4.24
3502 7501 2.432300 GGTAAGGGCGAGGCAGCTA 61.432 63.158 5.04 0.00 37.29 3.32
3503 7502 1.068250 GTAAGGGCGAGGCAGCTAG 59.932 63.158 5.04 0.00 37.29 3.42
3504 7503 1.076265 TAAGGGCGAGGCAGCTAGA 60.076 57.895 0.00 0.00 37.29 2.43
3505 7504 1.109920 TAAGGGCGAGGCAGCTAGAG 61.110 60.000 0.00 0.00 37.29 2.43
3506 7505 3.151022 GGGCGAGGCAGCTAGAGT 61.151 66.667 0.00 0.00 37.29 3.24
3507 7506 2.726351 GGGCGAGGCAGCTAGAGTT 61.726 63.158 0.00 0.00 37.29 3.01
3508 7507 1.227118 GGCGAGGCAGCTAGAGTTC 60.227 63.158 0.00 0.00 37.29 3.01
3509 7508 1.513158 GCGAGGCAGCTAGAGTTCA 59.487 57.895 0.00 0.00 0.00 3.18
3510 7509 0.527385 GCGAGGCAGCTAGAGTTCAG 60.527 60.000 0.00 0.00 0.00 3.02
3511 7510 0.814457 CGAGGCAGCTAGAGTTCAGT 59.186 55.000 0.00 0.00 0.00 3.41
3512 7511 1.468908 CGAGGCAGCTAGAGTTCAGTG 60.469 57.143 0.00 0.00 0.00 3.66
3513 7512 0.901124 AGGCAGCTAGAGTTCAGTGG 59.099 55.000 0.00 0.00 0.00 4.00
3514 7513 0.107945 GGCAGCTAGAGTTCAGTGGG 60.108 60.000 0.00 0.00 0.00 4.61
3515 7514 0.898320 GCAGCTAGAGTTCAGTGGGA 59.102 55.000 0.00 0.00 0.00 4.37
3516 7515 1.134848 GCAGCTAGAGTTCAGTGGGAG 60.135 57.143 0.00 0.00 0.00 4.30
3517 7516 1.480137 CAGCTAGAGTTCAGTGGGAGG 59.520 57.143 0.00 0.00 0.00 4.30
3518 7517 1.359474 AGCTAGAGTTCAGTGGGAGGA 59.641 52.381 0.00 0.00 0.00 3.71
3519 7518 1.754226 GCTAGAGTTCAGTGGGAGGAG 59.246 57.143 0.00 0.00 0.00 3.69
3520 7519 2.621929 GCTAGAGTTCAGTGGGAGGAGA 60.622 54.545 0.00 0.00 0.00 3.71
3521 7520 2.230130 AGAGTTCAGTGGGAGGAGAG 57.770 55.000 0.00 0.00 0.00 3.20
3522 7521 0.534873 GAGTTCAGTGGGAGGAGAGC 59.465 60.000 0.00 0.00 0.00 4.09
3523 7522 0.178921 AGTTCAGTGGGAGGAGAGCA 60.179 55.000 0.00 0.00 0.00 4.26
3524 7523 0.908198 GTTCAGTGGGAGGAGAGCAT 59.092 55.000 0.00 0.00 0.00 3.79
3525 7524 0.907486 TTCAGTGGGAGGAGAGCATG 59.093 55.000 0.00 0.00 0.00 4.06
3526 7525 0.252421 TCAGTGGGAGGAGAGCATGT 60.252 55.000 0.00 0.00 0.00 3.21
3527 7526 0.617413 CAGTGGGAGGAGAGCATGTT 59.383 55.000 0.00 0.00 0.00 2.71
3528 7527 1.004044 CAGTGGGAGGAGAGCATGTTT 59.996 52.381 0.00 0.00 0.00 2.83
3529 7528 1.280421 AGTGGGAGGAGAGCATGTTTC 59.720 52.381 0.00 0.00 0.00 2.78
3530 7529 1.280421 GTGGGAGGAGAGCATGTTTCT 59.720 52.381 0.00 0.00 0.00 2.52
3531 7530 2.501723 GTGGGAGGAGAGCATGTTTCTA 59.498 50.000 0.00 0.00 0.00 2.10
3532 7531 2.768527 TGGGAGGAGAGCATGTTTCTAG 59.231 50.000 0.00 0.00 0.00 2.43
3533 7532 2.769095 GGGAGGAGAGCATGTTTCTAGT 59.231 50.000 0.00 0.00 0.00 2.57
3534 7533 3.198853 GGGAGGAGAGCATGTTTCTAGTT 59.801 47.826 0.00 0.00 0.00 2.24
3535 7534 4.323868 GGGAGGAGAGCATGTTTCTAGTTT 60.324 45.833 0.00 0.00 0.00 2.66
3536 7535 5.249420 GGAGGAGAGCATGTTTCTAGTTTT 58.751 41.667 0.00 0.00 0.00 2.43
3537 7536 6.407202 GGAGGAGAGCATGTTTCTAGTTTTA 58.593 40.000 0.00 0.00 0.00 1.52
3538 7537 7.051000 GGAGGAGAGCATGTTTCTAGTTTTAT 58.949 38.462 0.00 0.00 0.00 1.40
3539 7538 8.204836 GGAGGAGAGCATGTTTCTAGTTTTATA 58.795 37.037 0.00 0.00 0.00 0.98
3540 7539 9.771534 GAGGAGAGCATGTTTCTAGTTTTATAT 57.228 33.333 0.00 0.00 0.00 0.86
3541 7540 9.553064 AGGAGAGCATGTTTCTAGTTTTATATG 57.447 33.333 0.00 0.00 0.00 1.78
3542 7541 9.331282 GGAGAGCATGTTTCTAGTTTTATATGT 57.669 33.333 0.00 0.00 0.00 2.29
3545 7544 9.722056 GAGCATGTTTCTAGTTTTATATGTTGG 57.278 33.333 0.00 0.00 0.00 3.77
3546 7545 8.686334 AGCATGTTTCTAGTTTTATATGTTGGG 58.314 33.333 0.00 0.00 0.00 4.12
3547 7546 7.435192 GCATGTTTCTAGTTTTATATGTTGGGC 59.565 37.037 0.00 0.00 0.00 5.36
3548 7547 8.465999 CATGTTTCTAGTTTTATATGTTGGGCA 58.534 33.333 0.00 0.00 0.00 5.36
3549 7548 8.050778 TGTTTCTAGTTTTATATGTTGGGCAG 57.949 34.615 0.00 0.00 0.00 4.85
3550 7549 7.668052 TGTTTCTAGTTTTATATGTTGGGCAGT 59.332 33.333 0.00 0.00 0.00 4.40
3551 7550 7.624360 TTCTAGTTTTATATGTTGGGCAGTG 57.376 36.000 0.00 0.00 0.00 3.66
3552 7551 6.717289 TCTAGTTTTATATGTTGGGCAGTGT 58.283 36.000 0.00 0.00 0.00 3.55
3553 7552 5.897377 AGTTTTATATGTTGGGCAGTGTC 57.103 39.130 0.00 0.00 0.00 3.67
3554 7553 5.321102 AGTTTTATATGTTGGGCAGTGTCA 58.679 37.500 0.00 0.00 0.00 3.58
3555 7554 5.415701 AGTTTTATATGTTGGGCAGTGTCAG 59.584 40.000 0.00 0.00 0.00 3.51
3556 7555 1.755179 ATATGTTGGGCAGTGTCAGC 58.245 50.000 0.00 0.00 0.00 4.26
3557 7556 0.673333 TATGTTGGGCAGTGTCAGCG 60.673 55.000 0.00 0.00 0.00 5.18
3558 7557 4.030452 GTTGGGCAGTGTCAGCGC 62.030 66.667 0.00 0.00 44.24 5.92
3561 7560 3.807538 GGGCAGTGTCAGCGCATG 61.808 66.667 11.47 5.22 43.54 4.06
3562 7561 3.807538 GGCAGTGTCAGCGCATGG 61.808 66.667 11.47 0.00 0.00 3.66
3563 7562 3.052082 GCAGTGTCAGCGCATGGT 61.052 61.111 11.47 0.00 0.00 3.55
3564 7563 1.741401 GCAGTGTCAGCGCATGGTA 60.741 57.895 11.47 0.00 0.00 3.25
3565 7564 1.298157 GCAGTGTCAGCGCATGGTAA 61.298 55.000 11.47 0.00 0.00 2.85
3566 7565 1.155889 CAGTGTCAGCGCATGGTAAA 58.844 50.000 11.47 0.00 0.00 2.01
3567 7566 1.135972 CAGTGTCAGCGCATGGTAAAC 60.136 52.381 11.47 0.00 0.00 2.01
3568 7567 0.168128 GTGTCAGCGCATGGTAAACC 59.832 55.000 11.47 0.00 0.00 3.27
3569 7568 1.295357 TGTCAGCGCATGGTAAACCG 61.295 55.000 11.47 0.00 39.43 4.44
3570 7569 1.017177 GTCAGCGCATGGTAAACCGA 61.017 55.000 11.47 0.00 39.43 4.69
3571 7570 0.739462 TCAGCGCATGGTAAACCGAG 60.739 55.000 11.47 0.00 39.43 4.63
3572 7571 0.739462 CAGCGCATGGTAAACCGAGA 60.739 55.000 11.47 0.00 39.43 4.04
3573 7572 0.036765 AGCGCATGGTAAACCGAGAA 60.037 50.000 11.47 0.00 39.43 2.87
3574 7573 0.800012 GCGCATGGTAAACCGAGAAA 59.200 50.000 0.30 0.00 39.43 2.52
3575 7574 1.198178 GCGCATGGTAAACCGAGAAAA 59.802 47.619 0.30 0.00 39.43 2.29
3576 7575 2.350964 GCGCATGGTAAACCGAGAAAAA 60.351 45.455 0.30 0.00 39.43 1.94
3577 7576 3.672241 GCGCATGGTAAACCGAGAAAAAT 60.672 43.478 0.30 0.00 39.43 1.82
3578 7577 4.095610 CGCATGGTAAACCGAGAAAAATC 58.904 43.478 0.00 0.00 39.43 2.17
3579 7578 4.095610 GCATGGTAAACCGAGAAAAATCG 58.904 43.478 0.00 0.00 42.36 3.34
3594 7593 9.991388 CGAGAAAAATCGGTTATATAAACCAAA 57.009 29.630 4.92 0.00 40.28 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 119 2.546368 CACAAAACTAGTAAGCGGCACA 59.454 45.455 1.45 0.00 0.00 4.57
764 2864 1.158434 GTTAATGAAACGGACCGGCA 58.842 50.000 20.00 13.48 0.00 5.69
766 2866 0.722848 CGGTTAATGAAACGGACCGG 59.277 55.000 20.00 0.00 46.93 5.28
818 2918 0.882927 TGTGAACTGTGGTTAGGCGC 60.883 55.000 0.00 0.00 35.58 6.53
839 2939 2.141517 CTTCTGTGGCTCTGTGTTGAG 58.858 52.381 0.00 0.00 37.16 3.02
840 2940 1.762370 TCTTCTGTGGCTCTGTGTTGA 59.238 47.619 0.00 0.00 0.00 3.18
866 2983 1.315981 TGCTCCGCTCGTCTCTTGAT 61.316 55.000 0.00 0.00 0.00 2.57
867 2984 1.927608 CTGCTCCGCTCGTCTCTTGA 61.928 60.000 0.00 0.00 0.00 3.02
877 2998 1.445095 CTGCCTTATCTGCTCCGCT 59.555 57.895 0.00 0.00 0.00 5.52
881 3002 0.878086 GGTCGCTGCCTTATCTGCTC 60.878 60.000 0.00 0.00 0.00 4.26
893 3014 2.359169 TTAGCCTGGGAGGTCGCTG 61.359 63.158 0.00 0.00 37.80 5.18
906 3027 5.735766 AGATTCTCTTTACAGGTGTTAGCC 58.264 41.667 0.00 0.00 0.00 3.93
907 3028 7.361286 CCAAAGATTCTCTTTACAGGTGTTAGC 60.361 40.741 2.04 0.00 44.23 3.09
908 3029 7.661847 ACCAAAGATTCTCTTTACAGGTGTTAG 59.338 37.037 8.50 0.00 44.23 2.34
909 3030 7.514721 ACCAAAGATTCTCTTTACAGGTGTTA 58.485 34.615 8.50 0.00 44.23 2.41
910 3031 6.365520 ACCAAAGATTCTCTTTACAGGTGTT 58.634 36.000 8.50 0.00 44.23 3.32
986 3134 1.892819 CGACATGCTGGTGTCCTCCT 61.893 60.000 10.44 0.00 44.37 3.69
1194 3342 1.602237 GAAGGCGAGGATGGTTCCA 59.398 57.895 0.00 0.00 45.30 3.53
1246 3397 3.505790 ATGGGTGCAACGGGAGCAA 62.506 57.895 0.00 0.00 44.64 3.91
1286 3441 7.709149 AAATAGCAAGAAAGCCATTAGAACT 57.291 32.000 0.00 0.00 34.23 3.01
1305 3460 5.226396 CCATCGAGCTCCTACAGAAAATAG 58.774 45.833 8.47 0.00 0.00 1.73
1539 5163 1.094785 GGTACTGGCCGTCGTACTTA 58.905 55.000 21.64 0.00 36.94 2.24
1572 5196 1.226831 CTCGCCGAGGAGCTCTTTC 60.227 63.158 14.64 10.84 0.00 2.62
1656 5280 3.549019 CGTCGTATCTGGAGAAGATGGTG 60.549 52.174 0.00 0.00 45.64 4.17
1691 5315 2.674852 GACGAGCCCATGCATATGTATG 59.325 50.000 22.71 22.71 41.13 2.39
1700 5324 0.032130 TCTAATCGACGAGCCCATGC 59.968 55.000 3.01 0.00 37.95 4.06
1702 5326 1.964223 ACATCTAATCGACGAGCCCAT 59.036 47.619 3.01 0.00 0.00 4.00
1703 5327 1.399714 ACATCTAATCGACGAGCCCA 58.600 50.000 3.01 0.00 0.00 5.36
1706 5330 6.088350 GGAGAAATAACATCTAATCGACGAGC 59.912 42.308 3.01 0.00 0.00 5.03
1707 5331 7.139392 TGGAGAAATAACATCTAATCGACGAG 58.861 38.462 3.01 0.00 0.00 4.18
1708 5332 7.034685 TGGAGAAATAACATCTAATCGACGA 57.965 36.000 0.00 0.00 0.00 4.20
1709 5333 7.620188 GCATGGAGAAATAACATCTAATCGACG 60.620 40.741 0.00 0.00 0.00 5.12
1710 5334 7.386299 AGCATGGAGAAATAACATCTAATCGAC 59.614 37.037 0.00 0.00 0.00 4.20
1714 5338 9.011095 CATGAGCATGGAGAAATAACATCTAAT 57.989 33.333 2.54 0.00 35.24 1.73
1715 5339 7.040892 GCATGAGCATGGAGAAATAACATCTAA 60.041 37.037 12.00 0.00 41.58 2.10
1717 5341 5.241064 GCATGAGCATGGAGAAATAACATCT 59.759 40.000 12.00 0.00 41.58 2.90
1718 5342 5.241064 AGCATGAGCATGGAGAAATAACATC 59.759 40.000 12.00 0.00 45.49 3.06
1729 5353 1.206849 TCACGTAAGCATGAGCATGGA 59.793 47.619 12.00 0.00 45.49 3.41
1730 5354 1.596260 CTCACGTAAGCATGAGCATGG 59.404 52.381 12.00 0.00 45.49 3.66
1732 5356 2.544685 GTCTCACGTAAGCATGAGCAT 58.455 47.619 0.00 0.00 45.49 3.79
1733 5357 1.732405 CGTCTCACGTAAGCATGAGCA 60.732 52.381 0.00 0.00 39.54 4.26
1734 5358 0.917259 CGTCTCACGTAAGCATGAGC 59.083 55.000 0.00 0.00 39.54 4.26
1751 5375 1.079405 CGGGCCTGTACATTCACGT 60.079 57.895 2.29 0.00 0.00 4.49
1753 5377 0.035820 TTCCGGGCCTGTACATTCAC 60.036 55.000 11.58 0.00 0.00 3.18
1887 5519 2.738643 GCCTCCGTCGATGAGATTGAAA 60.739 50.000 14.49 0.00 31.26 2.69
1940 5572 3.910627 AGGGACTGAGACATAAACCAGTT 59.089 43.478 0.00 0.00 39.67 3.16
1970 5605 9.927081 AGAATTCCATTATATTCTTTGGAGTGT 57.073 29.630 0.65 0.00 37.74 3.55
1995 5630 4.576873 ACAGTAGTAGATGGACGTCATGAG 59.423 45.833 18.91 0.00 35.97 2.90
1997 5632 4.602006 CACAGTAGTAGATGGACGTCATG 58.398 47.826 18.91 2.55 35.97 3.07
2030 5838 8.866970 TGCATGTATCCAATGTCAACATATAT 57.133 30.769 0.00 0.00 35.10 0.86
2031 5839 8.156165 TCTGCATGTATCCAATGTCAACATATA 58.844 33.333 0.00 0.00 35.10 0.86
2249 6058 4.796231 GTCGATGAGCGGCGTGGT 62.796 66.667 9.37 0.00 41.33 4.16
2501 6310 2.002586 CTCGTTGGTGCCTCTATTGTG 58.997 52.381 0.00 0.00 0.00 3.33
2531 6343 1.132640 GCATCCGTGCGAAACTGAC 59.867 57.895 0.00 0.00 42.28 3.51
2592 6404 4.698304 CCAATGTTATTTACTGTGGGACGT 59.302 41.667 0.00 0.00 31.49 4.34
2629 6441 8.004344 CGTAATAATGTGAGTTTAGCTACATGC 58.996 37.037 0.00 0.00 43.29 4.06
2633 6455 7.009815 TGCACGTAATAATGTGAGTTTAGCTAC 59.990 37.037 0.00 0.00 44.09 3.58
2646 6468 7.750458 CCTATATTTGCCTTGCACGTAATAATG 59.250 37.037 0.00 0.00 38.71 1.90
2647 6469 7.663905 TCCTATATTTGCCTTGCACGTAATAAT 59.336 33.333 0.00 0.00 38.71 1.28
2648 6470 6.993308 TCCTATATTTGCCTTGCACGTAATAA 59.007 34.615 0.00 0.00 38.71 1.40
2697 6519 5.177696 GCAGTTCAATATTTCTAGCCTACCG 59.822 44.000 0.00 0.00 0.00 4.02
2733 6555 4.899502 ACTTGTTTCCAGACCTATGTGAG 58.100 43.478 0.00 0.00 0.00 3.51
2734 6556 4.974645 ACTTGTTTCCAGACCTATGTGA 57.025 40.909 0.00 0.00 0.00 3.58
2736 6558 5.048846 ACAACTTGTTTCCAGACCTATGT 57.951 39.130 0.00 0.00 0.00 2.29
2737 6559 8.786826 TTATACAACTTGTTTCCAGACCTATG 57.213 34.615 0.00 0.00 0.00 2.23
2739 6572 7.876068 CACTTATACAACTTGTTTCCAGACCTA 59.124 37.037 0.00 0.00 0.00 3.08
2745 6578 5.942961 TCCCACTTATACAACTTGTTTCCA 58.057 37.500 0.00 0.00 0.00 3.53
2747 6580 7.739498 TTCTCCCACTTATACAACTTGTTTC 57.261 36.000 0.00 0.00 0.00 2.78
2760 6593 8.278639 TGGCTATTTATTTCATTCTCCCACTTA 58.721 33.333 0.00 0.00 0.00 2.24
2796 6629 2.437200 AATTTCATGTTGTGCCCACG 57.563 45.000 0.00 0.00 0.00 4.94
2867 6864 3.247056 TTTCAGATGTCGCCCCGCA 62.247 57.895 0.00 0.00 0.00 5.69
2899 6896 2.182030 CTCTCTTCGGCGGTGGAC 59.818 66.667 7.21 0.00 0.00 4.02
2900 6897 3.760035 GCTCTCTTCGGCGGTGGA 61.760 66.667 7.21 2.01 0.00 4.02
2912 6909 2.352034 CAGTGATTGCATGTCAGCTCTC 59.648 50.000 2.81 0.00 34.99 3.20
2925 6922 3.745332 TTTGCAGTATCGCAGTGATTG 57.255 42.857 0.72 0.00 44.14 2.67
2926 6923 4.970662 ATTTTGCAGTATCGCAGTGATT 57.029 36.364 0.72 0.00 44.14 2.57
2927 6924 4.970662 AATTTTGCAGTATCGCAGTGAT 57.029 36.364 1.20 1.20 44.14 3.06
2928 6925 4.475028 CAAATTTTGCAGTATCGCAGTGA 58.525 39.130 0.00 0.00 44.14 3.41
2933 6930 2.605030 TGCCAAATTTTGCAGTATCGC 58.395 42.857 12.58 1.17 32.77 4.58
2966 6963 6.121776 TGTCACACACAAGGGTTATATTCT 57.878 37.500 0.00 0.00 29.30 2.40
2972 6971 3.687125 TGTTTGTCACACACAAGGGTTA 58.313 40.909 0.00 0.00 45.98 2.85
2973 6972 2.520069 TGTTTGTCACACACAAGGGTT 58.480 42.857 0.00 0.00 45.98 4.11
2974 6973 2.208132 TGTTTGTCACACACAAGGGT 57.792 45.000 0.00 0.00 45.98 4.34
2975 6974 2.799207 GCATGTTTGTCACACACAAGGG 60.799 50.000 0.00 0.00 45.98 3.95
2989 6988 5.819379 CACTGATGACTACCTATGCATGTTT 59.181 40.000 10.16 0.00 0.00 2.83
3044 7043 3.513515 AGCCAAATTGAATTTCCGCCTAA 59.486 39.130 12.93 0.00 0.00 2.69
3047 7046 2.270923 GAGCCAAATTGAATTTCCGCC 58.729 47.619 12.93 4.72 0.00 6.13
3048 7047 2.270923 GGAGCCAAATTGAATTTCCGC 58.729 47.619 0.00 5.75 0.00 5.54
3049 7048 2.735126 CGGGAGCCAAATTGAATTTCCG 60.735 50.000 11.56 11.56 31.41 4.30
3050 7049 2.418609 CCGGGAGCCAAATTGAATTTCC 60.419 50.000 0.00 0.00 0.00 3.13
3051 7050 2.418609 CCCGGGAGCCAAATTGAATTTC 60.419 50.000 18.48 0.00 0.00 2.17
3052 7051 1.554617 CCCGGGAGCCAAATTGAATTT 59.445 47.619 18.48 0.00 0.00 1.82
3053 7052 1.194218 CCCGGGAGCCAAATTGAATT 58.806 50.000 18.48 0.00 0.00 2.17
3054 7053 1.329913 GCCCGGGAGCCAAATTGAAT 61.330 55.000 29.31 0.00 0.00 2.57
3055 7054 1.981853 GCCCGGGAGCCAAATTGAA 60.982 57.895 29.31 0.00 0.00 2.69
3056 7055 2.362375 GCCCGGGAGCCAAATTGA 60.362 61.111 29.31 0.00 0.00 2.57
3064 7063 0.759060 AAATATTTGGGCCCGGGAGC 60.759 55.000 29.31 10.00 0.00 4.70
3065 7064 1.788229 AAAATATTTGGGCCCGGGAG 58.212 50.000 29.31 0.00 0.00 4.30
3066 7065 2.255770 AAAAATATTTGGGCCCGGGA 57.744 45.000 29.31 1.71 0.00 5.14
3121 7120 6.488344 TGTAGCATTTGGTGTGACTAAAATCA 59.512 34.615 0.00 0.00 32.38 2.57
3122 7121 6.908825 TGTAGCATTTGGTGTGACTAAAATC 58.091 36.000 0.00 0.00 32.38 2.17
3123 7122 6.892658 TGTAGCATTTGGTGTGACTAAAAT 57.107 33.333 0.00 0.00 32.38 1.82
3124 7123 6.676950 CATGTAGCATTTGGTGTGACTAAAA 58.323 36.000 0.00 0.00 32.38 1.52
3125 7124 5.335583 GCATGTAGCATTTGGTGTGACTAAA 60.336 40.000 0.00 0.00 44.79 1.85
3126 7125 4.155826 GCATGTAGCATTTGGTGTGACTAA 59.844 41.667 0.00 0.00 44.79 2.24
3127 7126 3.689161 GCATGTAGCATTTGGTGTGACTA 59.311 43.478 0.00 0.00 44.79 2.59
3128 7127 2.489329 GCATGTAGCATTTGGTGTGACT 59.511 45.455 0.00 0.00 44.79 3.41
3129 7128 2.867429 GCATGTAGCATTTGGTGTGAC 58.133 47.619 0.00 0.00 44.79 3.67
3139 7138 7.174599 TTTTGCCTTAAAATTTGCATGTAGCAT 59.825 29.630 2.17 0.00 42.14 3.79
3140 7139 6.484643 TTTTGCCTTAAAATTTGCATGTAGCA 59.515 30.769 2.17 0.00 41.47 3.49
3141 7140 6.479095 TTTGCCTTAAAATTTGCATGTAGC 57.521 33.333 2.17 0.00 45.96 3.58
3142 7141 8.016801 CCTTTTTGCCTTAAAATTTGCATGTAG 58.983 33.333 2.17 1.33 38.03 2.74
3143 7142 7.500559 ACCTTTTTGCCTTAAAATTTGCATGTA 59.499 29.630 2.17 0.00 38.03 2.29
3144 7143 6.320926 ACCTTTTTGCCTTAAAATTTGCATGT 59.679 30.769 2.17 0.00 38.03 3.21
3145 7144 6.737118 ACCTTTTTGCCTTAAAATTTGCATG 58.263 32.000 2.17 0.00 38.03 4.06
3146 7145 6.957920 ACCTTTTTGCCTTAAAATTTGCAT 57.042 29.167 2.17 0.00 38.03 3.96
3147 7146 6.765915 AACCTTTTTGCCTTAAAATTTGCA 57.234 29.167 0.00 0.00 38.03 4.08
3148 7147 7.378461 GCTTAACCTTTTTGCCTTAAAATTTGC 59.622 33.333 0.00 0.00 38.03 3.68
3149 7148 8.401709 TGCTTAACCTTTTTGCCTTAAAATTTG 58.598 29.630 0.00 0.00 38.03 2.32
3150 7149 8.402472 GTGCTTAACCTTTTTGCCTTAAAATTT 58.598 29.630 0.00 0.00 38.03 1.82
3151 7150 7.773224 AGTGCTTAACCTTTTTGCCTTAAAATT 59.227 29.630 0.00 0.00 38.03 1.82
3152 7151 7.279615 AGTGCTTAACCTTTTTGCCTTAAAAT 58.720 30.769 0.00 0.00 38.03 1.82
3153 7152 6.645306 AGTGCTTAACCTTTTTGCCTTAAAA 58.355 32.000 0.00 0.00 36.51 1.52
3154 7153 6.228616 AGTGCTTAACCTTTTTGCCTTAAA 57.771 33.333 0.00 0.00 0.00 1.52
3155 7154 5.862678 AGTGCTTAACCTTTTTGCCTTAA 57.137 34.783 0.00 0.00 0.00 1.85
3156 7155 5.862678 AAGTGCTTAACCTTTTTGCCTTA 57.137 34.783 0.00 0.00 0.00 2.69
3157 7156 4.753516 AAGTGCTTAACCTTTTTGCCTT 57.246 36.364 0.00 0.00 0.00 4.35
3158 7157 4.441792 CAAAGTGCTTAACCTTTTTGCCT 58.558 39.130 0.00 0.00 0.00 4.75
3159 7158 3.559655 CCAAAGTGCTTAACCTTTTTGCC 59.440 43.478 0.00 0.00 0.00 4.52
3160 7159 3.002246 GCCAAAGTGCTTAACCTTTTTGC 59.998 43.478 0.00 0.00 0.00 3.68
3161 7160 3.559655 GGCCAAAGTGCTTAACCTTTTTG 59.440 43.478 0.00 0.00 0.00 2.44
3162 7161 3.454447 AGGCCAAAGTGCTTAACCTTTTT 59.546 39.130 5.01 0.00 0.00 1.94
3163 7162 3.038280 AGGCCAAAGTGCTTAACCTTTT 58.962 40.909 5.01 0.00 0.00 2.27
3164 7163 2.365293 CAGGCCAAAGTGCTTAACCTTT 59.635 45.455 5.01 0.00 0.00 3.11
3165 7164 1.963515 CAGGCCAAAGTGCTTAACCTT 59.036 47.619 5.01 0.00 0.00 3.50
3166 7165 1.133482 ACAGGCCAAAGTGCTTAACCT 60.133 47.619 5.01 0.00 0.00 3.50
3167 7166 1.000274 CACAGGCCAAAGTGCTTAACC 60.000 52.381 5.01 0.00 0.00 2.85
3168 7167 2.422276 CACAGGCCAAAGTGCTTAAC 57.578 50.000 5.01 0.00 0.00 2.01
3174 7173 0.175302 TTTGTGCACAGGCCAAAGTG 59.825 50.000 20.59 16.07 40.13 3.16
3175 7174 0.901124 TTTTGTGCACAGGCCAAAGT 59.099 45.000 20.59 0.00 39.56 2.66
3176 7175 2.021355 TTTTTGTGCACAGGCCAAAG 57.979 45.000 20.59 0.00 39.56 2.77
3207 7206 8.800370 AAAAACAAATTTAGGTGACATTTGGT 57.200 26.923 9.82 2.01 39.08 3.67
3229 7228 5.184287 AGTGTTTCGTCTGGGAAAAGAAAAA 59.816 36.000 0.00 0.00 37.63 1.94
3230 7229 4.703093 AGTGTTTCGTCTGGGAAAAGAAAA 59.297 37.500 0.00 0.00 37.63 2.29
3231 7230 4.266714 AGTGTTTCGTCTGGGAAAAGAAA 58.733 39.130 0.00 0.00 37.63 2.52
3232 7231 3.881220 AGTGTTTCGTCTGGGAAAAGAA 58.119 40.909 0.00 0.00 37.63 2.52
3233 7232 3.553828 AGTGTTTCGTCTGGGAAAAGA 57.446 42.857 0.00 0.00 37.63 2.52
3234 7233 3.497262 GGTAGTGTTTCGTCTGGGAAAAG 59.503 47.826 0.00 0.00 37.63 2.27
3235 7234 3.118334 TGGTAGTGTTTCGTCTGGGAAAA 60.118 43.478 0.00 0.00 37.63 2.29
3236 7235 2.435069 TGGTAGTGTTTCGTCTGGGAAA 59.565 45.455 0.00 0.00 33.73 3.13
3237 7236 2.040939 TGGTAGTGTTTCGTCTGGGAA 58.959 47.619 0.00 0.00 0.00 3.97
3238 7237 1.342174 GTGGTAGTGTTTCGTCTGGGA 59.658 52.381 0.00 0.00 0.00 4.37
3239 7238 1.343465 AGTGGTAGTGTTTCGTCTGGG 59.657 52.381 0.00 0.00 0.00 4.45
3240 7239 2.609737 GGAGTGGTAGTGTTTCGTCTGG 60.610 54.545 0.00 0.00 0.00 3.86
3241 7240 2.035449 TGGAGTGGTAGTGTTTCGTCTG 59.965 50.000 0.00 0.00 0.00 3.51
3242 7241 2.313317 TGGAGTGGTAGTGTTTCGTCT 58.687 47.619 0.00 0.00 0.00 4.18
3243 7242 2.806608 TGGAGTGGTAGTGTTTCGTC 57.193 50.000 0.00 0.00 0.00 4.20
3244 7243 3.764237 AATGGAGTGGTAGTGTTTCGT 57.236 42.857 0.00 0.00 0.00 3.85
3245 7244 3.122948 CGAAATGGAGTGGTAGTGTTTCG 59.877 47.826 0.00 0.00 39.92 3.46
3246 7245 3.120304 GCGAAATGGAGTGGTAGTGTTTC 60.120 47.826 0.00 0.00 0.00 2.78
3247 7246 2.812011 GCGAAATGGAGTGGTAGTGTTT 59.188 45.455 0.00 0.00 0.00 2.83
3248 7247 2.224426 TGCGAAATGGAGTGGTAGTGTT 60.224 45.455 0.00 0.00 0.00 3.32
3249 7248 1.346395 TGCGAAATGGAGTGGTAGTGT 59.654 47.619 0.00 0.00 0.00 3.55
3250 7249 2.093306 TGCGAAATGGAGTGGTAGTG 57.907 50.000 0.00 0.00 0.00 2.74
3251 7250 4.481368 TTATGCGAAATGGAGTGGTAGT 57.519 40.909 0.00 0.00 0.00 2.73
3252 7251 6.377327 AATTTATGCGAAATGGAGTGGTAG 57.623 37.500 0.00 0.00 0.00 3.18
3253 7252 6.151985 ACAAATTTATGCGAAATGGAGTGGTA 59.848 34.615 0.00 0.00 0.00 3.25
3254 7253 5.047377 ACAAATTTATGCGAAATGGAGTGGT 60.047 36.000 0.00 0.00 0.00 4.16
3255 7254 5.410067 ACAAATTTATGCGAAATGGAGTGG 58.590 37.500 0.00 0.00 0.00 4.00
3256 7255 6.092092 TGACAAATTTATGCGAAATGGAGTG 58.908 36.000 0.00 0.00 0.00 3.51
3257 7256 6.266168 TGACAAATTTATGCGAAATGGAGT 57.734 33.333 0.00 0.00 0.00 3.85
3258 7257 6.237648 GCTTGACAAATTTATGCGAAATGGAG 60.238 38.462 0.00 0.00 0.00 3.86
3259 7258 5.576384 GCTTGACAAATTTATGCGAAATGGA 59.424 36.000 0.00 0.00 0.00 3.41
3260 7259 5.499017 CGCTTGACAAATTTATGCGAAATGG 60.499 40.000 10.67 0.00 43.81 3.16
3261 7260 5.060816 ACGCTTGACAAATTTATGCGAAATG 59.939 36.000 19.93 0.00 43.81 2.32
3262 7261 5.160641 ACGCTTGACAAATTTATGCGAAAT 58.839 33.333 19.93 0.08 43.81 2.17
3263 7262 4.541779 ACGCTTGACAAATTTATGCGAAA 58.458 34.783 19.93 0.00 43.81 3.46
3264 7263 4.153958 ACGCTTGACAAATTTATGCGAA 57.846 36.364 19.93 0.00 43.81 4.70
3265 7264 3.822594 ACGCTTGACAAATTTATGCGA 57.177 38.095 19.93 1.76 43.81 5.10
3266 7265 4.884257 AAACGCTTGACAAATTTATGCG 57.116 36.364 13.65 13.65 46.02 4.73
3286 7285 6.674066 AGTGTTTCGTCTGTGAAAAGAAAAA 58.326 32.000 0.76 0.00 39.40 1.94
3287 7286 6.249035 AGTGTTTCGTCTGTGAAAAGAAAA 57.751 33.333 0.76 0.00 39.40 2.29
3288 7287 5.873179 AGTGTTTCGTCTGTGAAAAGAAA 57.127 34.783 0.76 0.00 39.40 2.52
3289 7288 5.292589 GGTAGTGTTTCGTCTGTGAAAAGAA 59.707 40.000 0.76 0.00 39.40 2.52
3290 7289 4.807304 GGTAGTGTTTCGTCTGTGAAAAGA 59.193 41.667 0.76 0.00 39.40 2.52
3291 7290 4.569162 TGGTAGTGTTTCGTCTGTGAAAAG 59.431 41.667 0.76 0.00 39.40 2.27
3292 7291 4.330620 GTGGTAGTGTTTCGTCTGTGAAAA 59.669 41.667 0.76 0.00 39.40 2.29
3293 7292 3.866910 GTGGTAGTGTTTCGTCTGTGAAA 59.133 43.478 0.00 0.00 35.58 2.69
3294 7293 3.131577 AGTGGTAGTGTTTCGTCTGTGAA 59.868 43.478 0.00 0.00 0.00 3.18
3295 7294 2.691526 AGTGGTAGTGTTTCGTCTGTGA 59.308 45.455 0.00 0.00 0.00 3.58
3296 7295 3.050619 GAGTGGTAGTGTTTCGTCTGTG 58.949 50.000 0.00 0.00 0.00 3.66
3297 7296 2.035576 GGAGTGGTAGTGTTTCGTCTGT 59.964 50.000 0.00 0.00 0.00 3.41
3298 7297 2.035449 TGGAGTGGTAGTGTTTCGTCTG 59.965 50.000 0.00 0.00 0.00 3.51
3299 7298 2.313317 TGGAGTGGTAGTGTTTCGTCT 58.687 47.619 0.00 0.00 0.00 4.18
3300 7299 2.806608 TGGAGTGGTAGTGTTTCGTC 57.193 50.000 0.00 0.00 0.00 4.20
3301 7300 3.764237 AATGGAGTGGTAGTGTTTCGT 57.236 42.857 0.00 0.00 0.00 3.85
3302 7301 3.122948 CGAAATGGAGTGGTAGTGTTTCG 59.877 47.826 0.00 0.00 39.92 3.46
3303 7302 3.120304 GCGAAATGGAGTGGTAGTGTTTC 60.120 47.826 0.00 0.00 0.00 2.78
3304 7303 2.812011 GCGAAATGGAGTGGTAGTGTTT 59.188 45.455 0.00 0.00 0.00 2.83
3305 7304 2.224426 TGCGAAATGGAGTGGTAGTGTT 60.224 45.455 0.00 0.00 0.00 3.32
3306 7305 1.346395 TGCGAAATGGAGTGGTAGTGT 59.654 47.619 0.00 0.00 0.00 3.55
3307 7306 2.093306 TGCGAAATGGAGTGGTAGTG 57.907 50.000 0.00 0.00 0.00 2.74
3308 7307 4.481368 TTATGCGAAATGGAGTGGTAGT 57.519 40.909 0.00 0.00 0.00 2.73
3309 7308 6.377327 AATTTATGCGAAATGGAGTGGTAG 57.623 37.500 0.00 0.00 0.00 3.18
3310 7309 6.151985 ACAAATTTATGCGAAATGGAGTGGTA 59.848 34.615 0.00 0.00 0.00 3.25
3311 7310 5.047377 ACAAATTTATGCGAAATGGAGTGGT 60.047 36.000 0.00 0.00 0.00 4.16
3312 7311 5.410067 ACAAATTTATGCGAAATGGAGTGG 58.590 37.500 0.00 0.00 0.00 4.00
3313 7312 6.092092 TGACAAATTTATGCGAAATGGAGTG 58.908 36.000 0.00 0.00 0.00 3.51
3314 7313 6.266168 TGACAAATTTATGCGAAATGGAGT 57.734 33.333 0.00 0.00 0.00 3.85
3315 7314 6.808212 ACTTGACAAATTTATGCGAAATGGAG 59.192 34.615 0.00 0.00 0.00 3.86
3316 7315 6.686630 ACTTGACAAATTTATGCGAAATGGA 58.313 32.000 0.00 0.00 0.00 3.41
3317 7316 6.949578 ACTTGACAAATTTATGCGAAATGG 57.050 33.333 0.00 0.00 0.00 3.16
3318 7317 8.051909 GCATACTTGACAAATTTATGCGAAATG 58.948 33.333 15.20 0.79 31.25 2.32
3319 7318 7.975616 AGCATACTTGACAAATTTATGCGAAAT 59.024 29.630 20.07 8.70 42.33 2.17
3320 7319 7.312154 AGCATACTTGACAAATTTATGCGAAA 58.688 30.769 20.07 0.00 42.33 3.46
3321 7320 6.851609 AGCATACTTGACAAATTTATGCGAA 58.148 32.000 20.07 0.00 42.33 4.70
3322 7321 6.435430 AGCATACTTGACAAATTTATGCGA 57.565 33.333 20.07 0.00 42.33 5.10
3337 7336 1.659098 GTTAGCGTCGCAAGCATACTT 59.341 47.619 21.09 0.00 37.01 2.24
3338 7337 1.278238 GTTAGCGTCGCAAGCATACT 58.722 50.000 21.09 0.00 37.01 2.12
3339 7338 0.996462 TGTTAGCGTCGCAAGCATAC 59.004 50.000 21.09 8.02 37.01 2.39
3340 7339 1.858458 GATGTTAGCGTCGCAAGCATA 59.142 47.619 21.09 0.00 37.01 3.14
3341 7340 0.652592 GATGTTAGCGTCGCAAGCAT 59.347 50.000 21.09 18.26 37.01 3.79
3342 7341 0.389817 AGATGTTAGCGTCGCAAGCA 60.390 50.000 21.09 14.34 35.84 3.91
3343 7342 1.255600 GTAGATGTTAGCGTCGCAAGC 59.744 52.381 21.09 8.88 35.84 4.01
3344 7343 2.526077 TGTAGATGTTAGCGTCGCAAG 58.474 47.619 21.09 0.00 35.84 4.01
3345 7344 2.640346 TGTAGATGTTAGCGTCGCAA 57.360 45.000 21.09 8.92 35.84 4.85
3346 7345 2.256174 GTTGTAGATGTTAGCGTCGCA 58.744 47.619 21.09 2.36 35.84 5.10
3347 7346 2.256174 TGTTGTAGATGTTAGCGTCGC 58.744 47.619 9.80 9.80 35.84 5.19
3348 7347 4.896562 TTTGTTGTAGATGTTAGCGTCG 57.103 40.909 0.00 0.00 35.84 5.12
3349 7348 8.600625 TGAATATTTGTTGTAGATGTTAGCGTC 58.399 33.333 0.00 0.00 0.00 5.19
3350 7349 8.487313 TGAATATTTGTTGTAGATGTTAGCGT 57.513 30.769 0.00 0.00 0.00 5.07
3351 7350 8.817100 TCTGAATATTTGTTGTAGATGTTAGCG 58.183 33.333 0.00 0.00 0.00 4.26
3399 7398 1.086696 CAGCAAACATACCGAGTGGG 58.913 55.000 0.00 0.00 40.75 4.61
3400 7399 1.808411 ACAGCAAACATACCGAGTGG 58.192 50.000 0.00 0.00 42.84 4.00
3401 7400 2.671396 GGTACAGCAAACATACCGAGTG 59.329 50.000 0.00 0.00 0.00 3.51
3402 7401 2.300723 TGGTACAGCAAACATACCGAGT 59.699 45.455 0.00 0.00 41.18 4.18
3403 7402 2.967362 TGGTACAGCAAACATACCGAG 58.033 47.619 0.00 0.00 41.18 4.63
3404 7403 3.007074 TCTTGGTACAGCAAACATACCGA 59.993 43.478 0.00 0.00 42.39 4.69
3405 7404 3.331150 TCTTGGTACAGCAAACATACCG 58.669 45.455 0.00 0.00 42.39 4.02
3406 7405 4.700213 ACATCTTGGTACAGCAAACATACC 59.300 41.667 0.00 0.00 42.39 2.73
3407 7406 5.880054 ACATCTTGGTACAGCAAACATAC 57.120 39.130 0.00 0.00 42.39 2.39
3408 7407 5.878116 GGTACATCTTGGTACAGCAAACATA 59.122 40.000 5.90 0.00 44.26 2.29
3409 7408 4.700213 GGTACATCTTGGTACAGCAAACAT 59.300 41.667 5.90 0.00 44.26 2.71
3410 7409 4.069304 GGTACATCTTGGTACAGCAAACA 58.931 43.478 5.90 0.00 44.26 2.83
3411 7410 4.069304 TGGTACATCTTGGTACAGCAAAC 58.931 43.478 5.90 0.00 44.26 2.93
3412 7411 4.359434 TGGTACATCTTGGTACAGCAAA 57.641 40.909 5.90 0.00 44.26 3.68
3413 7412 4.359434 TTGGTACATCTTGGTACAGCAA 57.641 40.909 5.90 0.00 44.26 3.91
3414 7413 4.568072 ATTGGTACATCTTGGTACAGCA 57.432 40.909 5.90 0.00 44.26 4.41
3415 7414 5.878116 TGTTATTGGTACATCTTGGTACAGC 59.122 40.000 5.90 0.00 44.26 4.40
3416 7415 7.915293 TTGTTATTGGTACATCTTGGTACAG 57.085 36.000 5.90 0.00 44.26 2.74
3417 7416 9.961264 TTATTGTTATTGGTACATCTTGGTACA 57.039 29.630 5.90 0.00 44.26 2.90
3420 7419 9.528489 AACTTATTGTTATTGGTACATCTTGGT 57.472 29.630 0.00 0.00 35.80 3.67
3421 7420 9.787532 CAACTTATTGTTATTGGTACATCTTGG 57.212 33.333 0.00 0.00 35.80 3.61
3426 7425 9.747898 TCCTTCAACTTATTGTTATTGGTACAT 57.252 29.630 0.00 0.00 35.80 2.29
3427 7426 9.747898 ATCCTTCAACTTATTGTTATTGGTACA 57.252 29.630 0.00 0.00 37.07 2.90
3429 7428 9.184523 CCATCCTTCAACTTATTGTTATTGGTA 57.815 33.333 0.00 0.00 37.07 3.25
3430 7429 7.124147 CCCATCCTTCAACTTATTGTTATTGGT 59.876 37.037 0.00 0.00 37.07 3.67
3431 7430 7.341769 TCCCATCCTTCAACTTATTGTTATTGG 59.658 37.037 0.00 0.00 37.07 3.16
3432 7431 8.292444 TCCCATCCTTCAACTTATTGTTATTG 57.708 34.615 0.00 0.00 37.07 1.90
3433 7432 8.336235 TCTCCCATCCTTCAACTTATTGTTATT 58.664 33.333 0.00 0.00 37.07 1.40
3434 7433 7.872138 TCTCCCATCCTTCAACTTATTGTTAT 58.128 34.615 0.00 0.00 37.07 1.89
3435 7434 7.265599 TCTCCCATCCTTCAACTTATTGTTA 57.734 36.000 0.00 0.00 37.07 2.41
3436 7435 6.139679 TCTCCCATCCTTCAACTTATTGTT 57.860 37.500 0.00 0.00 39.92 2.83
3437 7436 5.779241 TCTCCCATCCTTCAACTTATTGT 57.221 39.130 0.00 0.00 37.11 2.71
3438 7437 6.939163 CCTATCTCCCATCCTTCAACTTATTG 59.061 42.308 0.00 0.00 37.14 1.90
3439 7438 6.044871 CCCTATCTCCCATCCTTCAACTTATT 59.955 42.308 0.00 0.00 0.00 1.40
3440 7439 5.549619 CCCTATCTCCCATCCTTCAACTTAT 59.450 44.000 0.00 0.00 0.00 1.73
3441 7440 4.907875 CCCTATCTCCCATCCTTCAACTTA 59.092 45.833 0.00 0.00 0.00 2.24
3442 7441 3.718956 CCCTATCTCCCATCCTTCAACTT 59.281 47.826 0.00 0.00 0.00 2.66
3443 7442 3.311702 ACCCTATCTCCCATCCTTCAACT 60.312 47.826 0.00 0.00 0.00 3.16
3444 7443 3.049344 ACCCTATCTCCCATCCTTCAAC 58.951 50.000 0.00 0.00 0.00 3.18
3445 7444 3.048600 CACCCTATCTCCCATCCTTCAA 58.951 50.000 0.00 0.00 0.00 2.69
3446 7445 2.694397 CACCCTATCTCCCATCCTTCA 58.306 52.381 0.00 0.00 0.00 3.02
3447 7446 1.981495 CCACCCTATCTCCCATCCTTC 59.019 57.143 0.00 0.00 0.00 3.46
3448 7447 1.585592 TCCACCCTATCTCCCATCCTT 59.414 52.381 0.00 0.00 0.00 3.36
3449 7448 1.132689 GTCCACCCTATCTCCCATCCT 60.133 57.143 0.00 0.00 0.00 3.24
3450 7449 1.353091 GTCCACCCTATCTCCCATCC 58.647 60.000 0.00 0.00 0.00 3.51
3451 7450 0.969894 CGTCCACCCTATCTCCCATC 59.030 60.000 0.00 0.00 0.00 3.51
3452 7451 0.561184 TCGTCCACCCTATCTCCCAT 59.439 55.000 0.00 0.00 0.00 4.00
3453 7452 0.106167 CTCGTCCACCCTATCTCCCA 60.106 60.000 0.00 0.00 0.00 4.37
3454 7453 0.828343 CCTCGTCCACCCTATCTCCC 60.828 65.000 0.00 0.00 0.00 4.30
3455 7454 0.185416 TCCTCGTCCACCCTATCTCC 59.815 60.000 0.00 0.00 0.00 3.71
3456 7455 2.164338 GATCCTCGTCCACCCTATCTC 58.836 57.143 0.00 0.00 0.00 2.75
3457 7456 1.499438 TGATCCTCGTCCACCCTATCT 59.501 52.381 0.00 0.00 0.00 1.98
3458 7457 1.996798 TGATCCTCGTCCACCCTATC 58.003 55.000 0.00 0.00 0.00 2.08
3459 7458 2.091278 TCTTGATCCTCGTCCACCCTAT 60.091 50.000 0.00 0.00 0.00 2.57
3460 7459 1.286849 TCTTGATCCTCGTCCACCCTA 59.713 52.381 0.00 0.00 0.00 3.53
3461 7460 0.041238 TCTTGATCCTCGTCCACCCT 59.959 55.000 0.00 0.00 0.00 4.34
3462 7461 0.175989 GTCTTGATCCTCGTCCACCC 59.824 60.000 0.00 0.00 0.00 4.61
3463 7462 0.179134 CGTCTTGATCCTCGTCCACC 60.179 60.000 0.00 0.00 0.00 4.61
3464 7463 0.802607 GCGTCTTGATCCTCGTCCAC 60.803 60.000 0.00 0.00 0.00 4.02
3465 7464 1.511305 GCGTCTTGATCCTCGTCCA 59.489 57.895 0.00 0.00 0.00 4.02
3466 7465 1.586564 CGCGTCTTGATCCTCGTCC 60.587 63.158 0.00 0.00 0.00 4.79
3467 7466 1.586564 CCGCGTCTTGATCCTCGTC 60.587 63.158 4.92 0.00 0.00 4.20
3468 7467 1.028330 TACCGCGTCTTGATCCTCGT 61.028 55.000 4.92 0.00 0.00 4.18
3469 7468 0.099968 TTACCGCGTCTTGATCCTCG 59.900 55.000 4.92 0.00 0.00 4.63
3470 7469 1.536284 CCTTACCGCGTCTTGATCCTC 60.536 57.143 4.92 0.00 0.00 3.71
3471 7470 0.460311 CCTTACCGCGTCTTGATCCT 59.540 55.000 4.92 0.00 0.00 3.24
3472 7471 0.529992 CCCTTACCGCGTCTTGATCC 60.530 60.000 4.92 0.00 0.00 3.36
3473 7472 1.152383 GCCCTTACCGCGTCTTGATC 61.152 60.000 4.92 0.00 0.00 2.92
3474 7473 1.153429 GCCCTTACCGCGTCTTGAT 60.153 57.895 4.92 0.00 0.00 2.57
3475 7474 2.263540 GCCCTTACCGCGTCTTGA 59.736 61.111 4.92 0.00 0.00 3.02
3476 7475 3.186047 CGCCCTTACCGCGTCTTG 61.186 66.667 4.92 0.00 44.55 3.02
3484 7483 2.370647 CTAGCTGCCTCGCCCTTACC 62.371 65.000 0.00 0.00 0.00 2.85
3485 7484 1.068250 CTAGCTGCCTCGCCCTTAC 59.932 63.158 0.00 0.00 0.00 2.34
3486 7485 1.076265 TCTAGCTGCCTCGCCCTTA 60.076 57.895 0.00 0.00 0.00 2.69
3487 7486 2.364317 TCTAGCTGCCTCGCCCTT 60.364 61.111 0.00 0.00 0.00 3.95
3488 7487 2.837291 CTCTAGCTGCCTCGCCCT 60.837 66.667 0.00 0.00 0.00 5.19
3489 7488 2.636778 GAACTCTAGCTGCCTCGCCC 62.637 65.000 0.00 0.00 0.00 6.13
3490 7489 1.227118 GAACTCTAGCTGCCTCGCC 60.227 63.158 0.00 0.00 0.00 5.54
3491 7490 0.527385 CTGAACTCTAGCTGCCTCGC 60.527 60.000 0.00 0.00 0.00 5.03
3492 7491 0.814457 ACTGAACTCTAGCTGCCTCG 59.186 55.000 0.00 0.00 0.00 4.63
3493 7492 1.134848 CCACTGAACTCTAGCTGCCTC 60.135 57.143 0.00 0.00 0.00 4.70
3494 7493 0.901124 CCACTGAACTCTAGCTGCCT 59.099 55.000 0.00 0.00 0.00 4.75
3495 7494 0.107945 CCCACTGAACTCTAGCTGCC 60.108 60.000 0.00 0.00 0.00 4.85
3496 7495 0.898320 TCCCACTGAACTCTAGCTGC 59.102 55.000 0.00 0.00 0.00 5.25
3497 7496 1.480137 CCTCCCACTGAACTCTAGCTG 59.520 57.143 0.00 0.00 0.00 4.24
3498 7497 1.359474 TCCTCCCACTGAACTCTAGCT 59.641 52.381 0.00 0.00 0.00 3.32
3499 7498 1.754226 CTCCTCCCACTGAACTCTAGC 59.246 57.143 0.00 0.00 0.00 3.42
3500 7499 3.287222 CTCTCCTCCCACTGAACTCTAG 58.713 54.545 0.00 0.00 0.00 2.43
3501 7500 2.621929 GCTCTCCTCCCACTGAACTCTA 60.622 54.545 0.00 0.00 0.00 2.43
3502 7501 1.894978 GCTCTCCTCCCACTGAACTCT 60.895 57.143 0.00 0.00 0.00 3.24
3503 7502 0.534873 GCTCTCCTCCCACTGAACTC 59.465 60.000 0.00 0.00 0.00 3.01
3504 7503 0.178921 TGCTCTCCTCCCACTGAACT 60.179 55.000 0.00 0.00 0.00 3.01
3505 7504 0.908198 ATGCTCTCCTCCCACTGAAC 59.092 55.000 0.00 0.00 0.00 3.18
3506 7505 0.907486 CATGCTCTCCTCCCACTGAA 59.093 55.000 0.00 0.00 0.00 3.02
3507 7506 0.252421 ACATGCTCTCCTCCCACTGA 60.252 55.000 0.00 0.00 0.00 3.41
3508 7507 0.617413 AACATGCTCTCCTCCCACTG 59.383 55.000 0.00 0.00 0.00 3.66
3509 7508 1.280421 GAAACATGCTCTCCTCCCACT 59.720 52.381 0.00 0.00 0.00 4.00
3510 7509 1.280421 AGAAACATGCTCTCCTCCCAC 59.720 52.381 0.00 0.00 0.00 4.61
3511 7510 1.661463 AGAAACATGCTCTCCTCCCA 58.339 50.000 0.00 0.00 0.00 4.37
3512 7511 2.769095 ACTAGAAACATGCTCTCCTCCC 59.231 50.000 0.00 0.00 0.00 4.30
3513 7512 4.479786 AACTAGAAACATGCTCTCCTCC 57.520 45.455 0.00 0.00 0.00 4.30
3514 7513 9.771534 ATATAAAACTAGAAACATGCTCTCCTC 57.228 33.333 0.00 0.00 0.00 3.71
3515 7514 9.553064 CATATAAAACTAGAAACATGCTCTCCT 57.447 33.333 0.00 0.00 0.00 3.69
3516 7515 9.331282 ACATATAAAACTAGAAACATGCTCTCC 57.669 33.333 0.00 0.00 0.00 3.71
3519 7518 9.722056 CCAACATATAAAACTAGAAACATGCTC 57.278 33.333 0.00 0.00 0.00 4.26
3520 7519 8.686334 CCCAACATATAAAACTAGAAACATGCT 58.314 33.333 0.00 0.00 0.00 3.79
3521 7520 7.435192 GCCCAACATATAAAACTAGAAACATGC 59.565 37.037 0.00 0.00 0.00 4.06
3522 7521 8.465999 TGCCCAACATATAAAACTAGAAACATG 58.534 33.333 0.00 0.00 0.00 3.21
3523 7522 8.588290 TGCCCAACATATAAAACTAGAAACAT 57.412 30.769 0.00 0.00 0.00 2.71
3524 7523 7.668052 ACTGCCCAACATATAAAACTAGAAACA 59.332 33.333 0.00 0.00 0.00 2.83
3525 7524 7.968405 CACTGCCCAACATATAAAACTAGAAAC 59.032 37.037 0.00 0.00 0.00 2.78
3526 7525 7.668052 ACACTGCCCAACATATAAAACTAGAAA 59.332 33.333 0.00 0.00 0.00 2.52
3527 7526 7.172342 ACACTGCCCAACATATAAAACTAGAA 58.828 34.615 0.00 0.00 0.00 2.10
3528 7527 6.717289 ACACTGCCCAACATATAAAACTAGA 58.283 36.000 0.00 0.00 0.00 2.43
3529 7528 6.597672 TGACACTGCCCAACATATAAAACTAG 59.402 38.462 0.00 0.00 0.00 2.57
3530 7529 6.477253 TGACACTGCCCAACATATAAAACTA 58.523 36.000 0.00 0.00 0.00 2.24
3531 7530 5.321102 TGACACTGCCCAACATATAAAACT 58.679 37.500 0.00 0.00 0.00 2.66
3532 7531 5.637006 TGACACTGCCCAACATATAAAAC 57.363 39.130 0.00 0.00 0.00 2.43
3533 7532 4.157656 GCTGACACTGCCCAACATATAAAA 59.842 41.667 0.00 0.00 0.00 1.52
3534 7533 3.694072 GCTGACACTGCCCAACATATAAA 59.306 43.478 0.00 0.00 0.00 1.40
3535 7534 3.278574 GCTGACACTGCCCAACATATAA 58.721 45.455 0.00 0.00 0.00 0.98
3536 7535 2.741553 CGCTGACACTGCCCAACATATA 60.742 50.000 0.00 0.00 0.00 0.86
3537 7536 1.755179 GCTGACACTGCCCAACATAT 58.245 50.000 0.00 0.00 0.00 1.78
3538 7537 0.673333 CGCTGACACTGCCCAACATA 60.673 55.000 0.00 0.00 0.00 2.29
3539 7538 1.968017 CGCTGACACTGCCCAACAT 60.968 57.895 0.00 0.00 0.00 2.71
3540 7539 2.591429 CGCTGACACTGCCCAACA 60.591 61.111 0.00 0.00 0.00 3.33
3541 7540 4.030452 GCGCTGACACTGCCCAAC 62.030 66.667 0.00 0.00 0.00 3.77
3542 7541 3.848301 ATGCGCTGACACTGCCCAA 62.848 57.895 9.73 0.00 0.00 4.12
3543 7542 4.334118 ATGCGCTGACACTGCCCA 62.334 61.111 9.73 0.00 0.00 5.36
3544 7543 3.807538 CATGCGCTGACACTGCCC 61.808 66.667 9.73 0.00 0.00 5.36
3545 7544 3.807538 CCATGCGCTGACACTGCC 61.808 66.667 9.73 0.00 0.00 4.85
3546 7545 1.298157 TTACCATGCGCTGACACTGC 61.298 55.000 9.73 0.00 0.00 4.40
3547 7546 1.135972 GTTTACCATGCGCTGACACTG 60.136 52.381 9.73 0.00 0.00 3.66
3548 7547 1.156736 GTTTACCATGCGCTGACACT 58.843 50.000 9.73 0.00 0.00 3.55
3549 7548 0.168128 GGTTTACCATGCGCTGACAC 59.832 55.000 9.73 0.00 35.64 3.67
3550 7549 1.295357 CGGTTTACCATGCGCTGACA 61.295 55.000 9.73 0.00 35.14 3.58
3551 7550 1.017177 TCGGTTTACCATGCGCTGAC 61.017 55.000 9.73 0.00 35.14 3.51
3552 7551 0.739462 CTCGGTTTACCATGCGCTGA 60.739 55.000 9.73 0.00 35.14 4.26
3553 7552 0.739462 TCTCGGTTTACCATGCGCTG 60.739 55.000 9.73 4.25 35.14 5.18
3554 7553 0.036765 TTCTCGGTTTACCATGCGCT 60.037 50.000 9.73 0.00 35.14 5.92
3555 7554 0.800012 TTTCTCGGTTTACCATGCGC 59.200 50.000 0.00 0.00 35.14 6.09
3556 7555 3.546002 TTTTTCTCGGTTTACCATGCG 57.454 42.857 0.00 0.00 35.14 4.73
3557 7556 4.095610 CGATTTTTCTCGGTTTACCATGC 58.904 43.478 0.00 0.00 35.03 4.06
3568 7567 9.991388 TTTGGTTTATATAACCGATTTTTCTCG 57.009 29.630 0.00 0.00 43.15 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.