Multiple sequence alignment - TraesCS4B01G239700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G239700 chr4B 100.000 4786 0 0 1 4786 497233782 497228997 0.000000e+00 8839.0
1 TraesCS4B01G239700 chr4B 95.041 121 5 1 3577 3696 660685932 660685812 6.320000e-44 189.0
2 TraesCS4B01G239700 chr4B 92.800 125 8 1 3573 3696 653049553 653049677 3.810000e-41 180.0
3 TraesCS4B01G239700 chr4B 91.803 61 2 2 4031 4091 497229698 497229641 1.100000e-11 82.4
4 TraesCS4B01G239700 chr4B 91.803 61 2 2 4085 4142 497229752 497229692 1.100000e-11 82.4
5 TraesCS4B01G239700 chr4D 94.621 3272 119 17 334 3563 401641933 401638677 0.000000e+00 5014.0
6 TraesCS4B01G239700 chr4D 87.884 619 55 11 4172 4776 401638167 401637555 0.000000e+00 710.0
7 TraesCS4B01G239700 chr4D 90.816 392 28 5 3695 4083 401638660 401638274 7.100000e-143 518.0
8 TraesCS4B01G239700 chr4A 92.778 1634 78 15 802 2409 59323875 59322256 0.000000e+00 2327.0
9 TraesCS4B01G239700 chr4A 93.846 1105 60 5 2462 3564 59322259 59321161 0.000000e+00 1657.0
10 TraesCS4B01G239700 chr4A 85.983 585 56 16 4210 4776 59320476 59319900 1.910000e-168 603.0
11 TraesCS4B01G239700 chr4A 98.746 319 4 0 1 319 149104087 149104405 6.950000e-158 568.0
12 TraesCS4B01G239700 chr4A 85.158 539 32 23 320 813 59325498 59324963 4.270000e-140 508.0
13 TraesCS4B01G239700 chr4A 94.688 320 16 1 1 319 111419334 111419653 3.330000e-136 496.0
14 TraesCS4B01G239700 chr4A 83.673 147 16 2 3880 4025 59320819 59320680 1.080000e-26 132.0
15 TraesCS4B01G239700 chr3A 98.433 319 5 0 1 319 496980405 496980087 3.230000e-156 562.0
16 TraesCS4B01G239700 chr7A 96.875 320 8 2 1 319 13923520 13923202 7.050000e-148 534.0
17 TraesCS4B01G239700 chr5B 95.679 324 13 1 1 323 539435915 539435592 1.970000e-143 520.0
18 TraesCS4B01G239700 chr5B 95.016 321 14 2 1 319 513615127 513615447 1.990000e-138 503.0
19 TraesCS4B01G239700 chr7B 95.312 320 14 1 1 319 376352241 376351922 1.540000e-139 507.0
20 TraesCS4B01G239700 chr3B 95.312 320 14 1 1 319 669727428 669727747 1.540000e-139 507.0
21 TraesCS4B01G239700 chr3B 94.958 119 5 1 3579 3696 167110018 167110136 8.180000e-43 185.0
22 TraesCS4B01G239700 chr2B 94.688 320 14 3 1 319 703164746 703164429 1.200000e-135 494.0
23 TraesCS4B01G239700 chr2B 93.496 123 7 1 3576 3697 653633474 653633352 1.060000e-41 182.0
24 TraesCS4B01G239700 chr1A 93.701 127 7 1 3572 3697 569891807 569891933 6.320000e-44 189.0
25 TraesCS4B01G239700 chr6B 94.215 121 6 1 3577 3696 164883038 164882918 2.940000e-42 183.0
26 TraesCS4B01G239700 chr6A 93.548 124 7 1 3581 3703 464513311 464513188 2.940000e-42 183.0
27 TraesCS4B01G239700 chr1B 92.800 125 8 1 3577 3700 295294932 295295056 3.810000e-41 180.0
28 TraesCS4B01G239700 chr1B 91.603 131 9 2 3581 3710 634288321 634288192 3.810000e-41 180.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G239700 chr4B 497228997 497233782 4785 True 8839.000000 8839 100.0000 1 4786 1 chr4B.!!$R1 4785
1 TraesCS4B01G239700 chr4D 401637555 401641933 4378 True 2080.666667 5014 91.1070 334 4776 3 chr4D.!!$R1 4442
2 TraesCS4B01G239700 chr4A 59319900 59325498 5598 True 1045.400000 2327 88.2876 320 4776 5 chr4A.!!$R1 4456

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
366 367 0.163788 GACGACAGCAATGACGTTGG 59.836 55.0 9.41 0.00 39.85 3.77 F
989 2149 0.462225 GAAGCTAGGGTTTCCGCTCC 60.462 60.0 0.00 0.00 38.33 4.70 F
2554 3791 0.846693 ATAGATGGGAGTGGGCCAAC 59.153 55.0 8.40 0.26 0.00 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1454 2614 1.064314 ACCGAGAGCTACTCCAGACAT 60.064 52.381 7.36 0.0 42.18 3.06 R
2563 3800 1.114627 GATGCTTTTGGCCCCTAAGG 58.885 55.000 0.00 0.0 40.92 2.69 R
4159 5586 0.032540 CAACCAAGAAGGGCAGCAAC 59.967 55.000 0.00 0.0 43.89 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.547091 CTTGAACAATATAATTGCACCGTAAG 57.453 34.615 0.00 0.00 0.00 2.34
45 46 8.876248 CGTAAGGCAGTTTATACTTCTTTTTC 57.124 34.615 4.75 0.00 31.63 2.29
46 47 7.961283 CGTAAGGCAGTTTATACTTCTTTTTCC 59.039 37.037 4.75 0.00 31.63 3.13
47 48 9.011095 GTAAGGCAGTTTATACTTCTTTTTCCT 57.989 33.333 4.75 0.00 31.63 3.36
48 49 7.454260 AGGCAGTTTATACTTCTTTTTCCTG 57.546 36.000 0.00 0.00 30.26 3.86
49 50 7.231467 AGGCAGTTTATACTTCTTTTTCCTGA 58.769 34.615 0.00 0.00 30.26 3.86
50 51 7.175119 AGGCAGTTTATACTTCTTTTTCCTGAC 59.825 37.037 0.00 0.00 30.26 3.51
51 52 7.175119 GGCAGTTTATACTTCTTTTTCCTGACT 59.825 37.037 0.00 0.00 30.26 3.41
52 53 9.216117 GCAGTTTATACTTCTTTTTCCTGACTA 57.784 33.333 0.00 0.00 30.26 2.59
57 58 9.924650 TTATACTTCTTTTTCCTGACTACACTC 57.075 33.333 0.00 0.00 0.00 3.51
58 59 5.290386 ACTTCTTTTTCCTGACTACACTCG 58.710 41.667 0.00 0.00 0.00 4.18
59 60 5.068723 ACTTCTTTTTCCTGACTACACTCGA 59.931 40.000 0.00 0.00 0.00 4.04
60 61 5.524971 TCTTTTTCCTGACTACACTCGAA 57.475 39.130 0.00 0.00 0.00 3.71
61 62 6.097915 TCTTTTTCCTGACTACACTCGAAT 57.902 37.500 0.00 0.00 0.00 3.34
62 63 7.223260 TCTTTTTCCTGACTACACTCGAATA 57.777 36.000 0.00 0.00 0.00 1.75
63 64 7.313646 TCTTTTTCCTGACTACACTCGAATAG 58.686 38.462 0.00 0.00 0.00 1.73
64 65 6.829229 TTTTCCTGACTACACTCGAATAGA 57.171 37.500 5.32 0.00 0.00 1.98
65 66 6.829229 TTTCCTGACTACACTCGAATAGAA 57.171 37.500 5.32 0.00 0.00 2.10
66 67 6.438259 TTCCTGACTACACTCGAATAGAAG 57.562 41.667 5.32 3.27 0.00 2.85
67 68 5.742063 TCCTGACTACACTCGAATAGAAGA 58.258 41.667 5.32 0.00 0.00 2.87
68 69 5.585445 TCCTGACTACACTCGAATAGAAGAC 59.415 44.000 5.32 0.00 0.00 3.01
69 70 5.587043 CCTGACTACACTCGAATAGAAGACT 59.413 44.000 5.32 0.00 0.00 3.24
70 71 6.762187 CCTGACTACACTCGAATAGAAGACTA 59.238 42.308 5.32 0.00 0.00 2.59
71 72 7.254522 CCTGACTACACTCGAATAGAAGACTAC 60.255 44.444 5.32 0.00 0.00 2.73
72 73 7.101700 TGACTACACTCGAATAGAAGACTACA 58.898 38.462 5.32 0.00 0.00 2.74
73 74 7.064371 TGACTACACTCGAATAGAAGACTACAC 59.936 40.741 5.32 0.00 0.00 2.90
74 75 7.104939 ACTACACTCGAATAGAAGACTACACT 58.895 38.462 5.32 0.00 0.00 3.55
75 76 8.256605 ACTACACTCGAATAGAAGACTACACTA 58.743 37.037 5.32 0.00 0.00 2.74
76 77 7.306205 ACACTCGAATAGAAGACTACACTAC 57.694 40.000 0.00 0.00 0.00 2.73
77 78 6.877855 ACACTCGAATAGAAGACTACACTACA 59.122 38.462 0.00 0.00 0.00 2.74
78 79 7.389884 ACACTCGAATAGAAGACTACACTACAA 59.610 37.037 0.00 0.00 0.00 2.41
79 80 7.906010 CACTCGAATAGAAGACTACACTACAAG 59.094 40.741 0.00 0.00 0.00 3.16
80 81 6.783162 TCGAATAGAAGACTACACTACAAGC 58.217 40.000 0.00 0.00 0.00 4.01
81 82 5.972382 CGAATAGAAGACTACACTACAAGCC 59.028 44.000 0.00 0.00 0.00 4.35
82 83 6.183360 CGAATAGAAGACTACACTACAAGCCT 60.183 42.308 0.00 0.00 0.00 4.58
83 84 7.012138 CGAATAGAAGACTACACTACAAGCCTA 59.988 40.741 0.00 0.00 0.00 3.93
84 85 8.770010 AATAGAAGACTACACTACAAGCCTAT 57.230 34.615 0.00 0.00 0.00 2.57
85 86 9.863650 AATAGAAGACTACACTACAAGCCTATA 57.136 33.333 0.00 0.00 0.00 1.31
87 88 8.770010 AGAAGACTACACTACAAGCCTATATT 57.230 34.615 0.00 0.00 0.00 1.28
88 89 9.863650 AGAAGACTACACTACAAGCCTATATTA 57.136 33.333 0.00 0.00 0.00 0.98
89 90 9.896263 GAAGACTACACTACAAGCCTATATTAC 57.104 37.037 0.00 0.00 0.00 1.89
90 91 8.406730 AGACTACACTACAAGCCTATATTACC 57.593 38.462 0.00 0.00 0.00 2.85
91 92 7.174599 AGACTACACTACAAGCCTATATTACCG 59.825 40.741 0.00 0.00 0.00 4.02
92 93 4.879598 ACACTACAAGCCTATATTACCGC 58.120 43.478 0.00 0.00 0.00 5.68
93 94 4.342951 ACACTACAAGCCTATATTACCGCA 59.657 41.667 0.00 0.00 0.00 5.69
94 95 5.011738 ACACTACAAGCCTATATTACCGCAT 59.988 40.000 0.00 0.00 0.00 4.73
95 96 5.932303 CACTACAAGCCTATATTACCGCATT 59.068 40.000 0.00 0.00 0.00 3.56
96 97 7.094631 CACTACAAGCCTATATTACCGCATTA 58.905 38.462 0.00 0.00 0.00 1.90
97 98 7.601130 CACTACAAGCCTATATTACCGCATTAA 59.399 37.037 0.00 0.00 0.00 1.40
98 99 8.319146 ACTACAAGCCTATATTACCGCATTAAT 58.681 33.333 0.00 0.00 0.00 1.40
99 100 9.811995 CTACAAGCCTATATTACCGCATTAATA 57.188 33.333 0.00 0.00 0.00 0.98
101 102 9.509956 ACAAGCCTATATTACCGCATTAATAAA 57.490 29.630 0.00 0.00 29.70 1.40
155 156 7.421530 TTTTCCTGCGATTACTATATGAAGC 57.578 36.000 0.00 0.00 0.00 3.86
156 157 5.722021 TCCTGCGATTACTATATGAAGCA 57.278 39.130 0.00 0.00 0.00 3.91
157 158 6.096673 TCCTGCGATTACTATATGAAGCAA 57.903 37.500 0.00 0.00 32.77 3.91
158 159 5.926542 TCCTGCGATTACTATATGAAGCAAC 59.073 40.000 0.00 0.00 32.77 4.17
159 160 5.696270 CCTGCGATTACTATATGAAGCAACA 59.304 40.000 0.00 0.00 32.77 3.33
160 161 6.369890 CCTGCGATTACTATATGAAGCAACAT 59.630 38.462 0.00 0.00 32.77 2.71
161 162 7.545615 CCTGCGATTACTATATGAAGCAACATA 59.454 37.037 5.57 5.57 37.20 2.29
162 163 8.825667 TGCGATTACTATATGAAGCAACATAA 57.174 30.769 6.88 0.00 36.53 1.90
163 164 8.708742 TGCGATTACTATATGAAGCAACATAAC 58.291 33.333 6.88 0.00 36.53 1.89
164 165 8.169268 GCGATTACTATATGAAGCAACATAACC 58.831 37.037 6.88 0.00 36.53 2.85
165 166 9.203421 CGATTACTATATGAAGCAACATAACCA 57.797 33.333 6.88 0.00 36.53 3.67
168 169 7.792374 ACTATATGAAGCAACATAACCACTG 57.208 36.000 6.88 0.00 36.53 3.66
169 170 7.338710 ACTATATGAAGCAACATAACCACTGT 58.661 34.615 6.88 0.00 36.53 3.55
170 171 6.683974 ATATGAAGCAACATAACCACTGTC 57.316 37.500 6.88 0.00 36.53 3.51
171 172 2.805671 TGAAGCAACATAACCACTGTCG 59.194 45.455 0.00 0.00 0.00 4.35
172 173 2.543777 AGCAACATAACCACTGTCGT 57.456 45.000 0.00 0.00 0.00 4.34
173 174 2.143122 AGCAACATAACCACTGTCGTG 58.857 47.619 0.00 0.00 40.89 4.35
174 175 1.871039 GCAACATAACCACTGTCGTGT 59.129 47.619 0.00 0.00 39.55 4.49
175 176 2.096417 GCAACATAACCACTGTCGTGTC 60.096 50.000 0.00 0.00 39.55 3.67
176 177 3.390135 CAACATAACCACTGTCGTGTCT 58.610 45.455 0.00 0.00 39.55 3.41
177 178 3.299340 ACATAACCACTGTCGTGTCTC 57.701 47.619 0.00 0.00 39.55 3.36
178 179 2.626266 ACATAACCACTGTCGTGTCTCA 59.374 45.455 0.00 0.00 39.55 3.27
179 180 2.787601 TAACCACTGTCGTGTCTCAC 57.212 50.000 0.00 0.00 39.55 3.51
180 181 1.112113 AACCACTGTCGTGTCTCACT 58.888 50.000 0.00 0.00 39.55 3.41
181 182 1.112113 ACCACTGTCGTGTCTCACTT 58.888 50.000 0.00 0.00 39.55 3.16
182 183 1.480954 ACCACTGTCGTGTCTCACTTT 59.519 47.619 0.00 0.00 39.55 2.66
183 184 2.093658 ACCACTGTCGTGTCTCACTTTT 60.094 45.455 0.00 0.00 39.55 2.27
184 185 2.285220 CCACTGTCGTGTCTCACTTTTG 59.715 50.000 0.00 0.00 39.55 2.44
185 186 3.186909 CACTGTCGTGTCTCACTTTTGA 58.813 45.455 0.00 0.00 36.39 2.69
186 187 3.616821 CACTGTCGTGTCTCACTTTTGAA 59.383 43.478 0.00 0.00 36.39 2.69
187 188 4.092821 CACTGTCGTGTCTCACTTTTGAAA 59.907 41.667 0.00 0.00 36.39 2.69
188 189 4.693566 ACTGTCGTGTCTCACTTTTGAAAA 59.306 37.500 0.00 0.00 31.34 2.29
189 190 5.354234 ACTGTCGTGTCTCACTTTTGAAAAT 59.646 36.000 0.00 0.00 31.34 1.82
190 191 6.537301 ACTGTCGTGTCTCACTTTTGAAAATA 59.463 34.615 0.00 0.00 31.34 1.40
191 192 6.711579 TGTCGTGTCTCACTTTTGAAAATAC 58.288 36.000 0.00 0.00 31.34 1.89
192 193 6.314152 TGTCGTGTCTCACTTTTGAAAATACA 59.686 34.615 0.00 0.00 31.34 2.29
193 194 7.148390 TGTCGTGTCTCACTTTTGAAAATACAA 60.148 33.333 0.00 0.00 31.34 2.41
194 195 7.855904 GTCGTGTCTCACTTTTGAAAATACAAT 59.144 33.333 0.00 0.00 31.34 2.71
195 196 8.402472 TCGTGTCTCACTTTTGAAAATACAATT 58.598 29.630 0.00 0.00 31.34 2.32
196 197 9.019764 CGTGTCTCACTTTTGAAAATACAATTT 57.980 29.630 0.00 0.00 31.34 1.82
200 201 9.248291 TCTCACTTTTGAAAATACAATTTGAGC 57.752 29.630 2.79 0.00 34.27 4.26
201 202 8.060020 TCACTTTTGAAAATACAATTTGAGCG 57.940 30.769 2.79 0.00 0.00 5.03
202 203 7.918033 TCACTTTTGAAAATACAATTTGAGCGA 59.082 29.630 2.79 0.00 0.00 4.93
203 204 7.998212 CACTTTTGAAAATACAATTTGAGCGAC 59.002 33.333 2.79 0.00 0.00 5.19
204 205 7.704472 ACTTTTGAAAATACAATTTGAGCGACA 59.296 29.630 2.79 0.00 0.00 4.35
205 206 8.586570 TTTTGAAAATACAATTTGAGCGACAT 57.413 26.923 2.79 0.00 0.00 3.06
206 207 7.795431 TTGAAAATACAATTTGAGCGACATC 57.205 32.000 2.79 0.00 0.00 3.06
207 208 6.907741 TGAAAATACAATTTGAGCGACATCA 58.092 32.000 2.79 0.00 0.00 3.07
208 209 7.366513 TGAAAATACAATTTGAGCGACATCAA 58.633 30.769 2.79 0.00 37.41 2.57
215 216 4.566545 TTTGAGCGACATCAAACATTGT 57.433 36.364 6.75 0.00 42.68 2.71
216 217 3.541071 TGAGCGACATCAAACATTGTG 57.459 42.857 0.00 0.00 0.00 3.33
217 218 2.877786 TGAGCGACATCAAACATTGTGT 59.122 40.909 0.00 0.00 0.00 3.72
218 219 4.061596 TGAGCGACATCAAACATTGTGTA 58.938 39.130 0.00 0.00 0.00 2.90
219 220 4.694982 TGAGCGACATCAAACATTGTGTAT 59.305 37.500 0.00 0.00 0.00 2.29
220 221 5.163864 TGAGCGACATCAAACATTGTGTATC 60.164 40.000 0.00 0.00 0.00 2.24
221 222 4.094887 AGCGACATCAAACATTGTGTATCC 59.905 41.667 0.00 0.00 0.00 2.59
222 223 4.142708 GCGACATCAAACATTGTGTATCCA 60.143 41.667 0.00 0.00 0.00 3.41
223 224 5.449041 GCGACATCAAACATTGTGTATCCAT 60.449 40.000 0.00 0.00 0.00 3.41
224 225 6.554419 CGACATCAAACATTGTGTATCCATT 58.446 36.000 0.00 0.00 0.00 3.16
225 226 7.028962 CGACATCAAACATTGTGTATCCATTT 58.971 34.615 0.00 0.00 0.00 2.32
226 227 7.008538 CGACATCAAACATTGTGTATCCATTTG 59.991 37.037 0.00 0.00 0.00 2.32
227 228 7.894708 ACATCAAACATTGTGTATCCATTTGA 58.105 30.769 0.00 0.00 38.52 2.69
228 229 8.533657 ACATCAAACATTGTGTATCCATTTGAT 58.466 29.630 0.00 0.00 42.86 2.57
229 230 9.373603 CATCAAACATTGTGTATCCATTTGATT 57.626 29.630 6.57 0.00 41.16 2.57
230 231 9.947433 ATCAAACATTGTGTATCCATTTGATTT 57.053 25.926 0.00 0.00 40.57 2.17
283 284 7.637709 TTATGTGAATCTCATCCGATTTACG 57.362 36.000 0.67 0.00 40.65 3.18
284 285 5.006153 TGTGAATCTCATCCGATTTACGT 57.994 39.130 0.00 0.00 40.65 3.57
285 286 5.416083 TGTGAATCTCATCCGATTTACGTT 58.584 37.500 0.00 0.00 40.65 3.99
286 287 5.872617 TGTGAATCTCATCCGATTTACGTTT 59.127 36.000 0.00 0.00 40.65 3.60
287 288 6.183360 TGTGAATCTCATCCGATTTACGTTTG 60.183 38.462 0.00 0.00 40.65 2.93
288 289 6.035650 GTGAATCTCATCCGATTTACGTTTGA 59.964 38.462 0.00 0.00 40.78 2.69
289 290 6.255670 TGAATCTCATCCGATTTACGTTTGAG 59.744 38.462 0.00 0.00 43.68 3.02
290 291 5.319140 TCTCATCCGATTTACGTTTGAGA 57.681 39.130 0.00 13.24 46.00 3.27
291 292 5.100259 TCTCATCCGATTTACGTTTGAGAC 58.900 41.667 0.00 0.00 44.76 3.36
299 300 4.471814 CGTTTGAGACGTGCGTTG 57.528 55.556 0.00 0.00 46.49 4.10
300 301 1.634225 CGTTTGAGACGTGCGTTGT 59.366 52.632 0.00 0.00 46.49 3.32
301 302 0.847670 CGTTTGAGACGTGCGTTGTA 59.152 50.000 0.00 0.00 46.49 2.41
302 303 1.395080 CGTTTGAGACGTGCGTTGTAC 60.395 52.381 0.00 0.00 46.49 2.90
303 304 0.847670 TTTGAGACGTGCGTTGTACG 59.152 50.000 5.90 5.90 46.21 3.67
308 309 2.850404 CGTGCGTTGTACGTGCAT 59.150 55.556 7.30 0.00 44.73 3.96
309 310 1.506891 CGTGCGTTGTACGTGCATG 60.507 57.895 7.30 3.82 44.73 4.06
310 311 1.792057 GTGCGTTGTACGTGCATGC 60.792 57.895 19.57 19.57 44.73 4.06
311 312 1.958715 TGCGTTGTACGTGCATGCT 60.959 52.632 24.14 0.40 44.73 3.79
312 313 1.206578 GCGTTGTACGTGCATGCTT 59.793 52.632 20.33 5.75 44.73 3.91
313 314 0.440758 GCGTTGTACGTGCATGCTTA 59.559 50.000 20.33 4.70 44.73 3.09
314 315 1.785518 GCGTTGTACGTGCATGCTTAC 60.786 52.381 20.33 16.62 44.73 2.34
315 316 1.724623 CGTTGTACGTGCATGCTTACT 59.275 47.619 20.33 1.10 36.74 2.24
316 317 2.918600 CGTTGTACGTGCATGCTTACTA 59.081 45.455 20.33 11.19 36.74 1.82
317 318 3.001070 CGTTGTACGTGCATGCTTACTAG 60.001 47.826 20.33 6.20 36.74 2.57
318 319 3.861276 TGTACGTGCATGCTTACTAGT 57.139 42.857 20.33 11.52 0.00 2.57
347 348 3.000727 GTGTAATTCCAGTCCAAGTCCG 58.999 50.000 0.00 0.00 0.00 4.79
364 365 1.282248 CCGACGACAGCAATGACGTT 61.282 55.000 7.14 0.00 39.85 3.99
366 367 0.163788 GACGACAGCAATGACGTTGG 59.836 55.000 9.41 0.00 39.85 3.77
374 381 1.334960 GCAATGACGTTGGTGACTTGG 60.335 52.381 9.41 0.00 38.29 3.61
456 477 6.935741 TTCTCCATTCGTCTTTTTCTTTGA 57.064 33.333 0.00 0.00 0.00 2.69
594 626 4.961511 AAACGCTCGCCGCACAGA 62.962 61.111 0.00 0.00 41.76 3.41
599 631 1.210155 GCTCGCCGCACAGAAAATT 59.790 52.632 0.00 0.00 38.92 1.82
629 668 1.618876 AACCCTCACACACCGACACA 61.619 55.000 0.00 0.00 0.00 3.72
634 673 1.965930 CACACACCGACACATGGGG 60.966 63.158 0.00 0.00 35.42 4.96
702 741 0.584396 CGCAGCTGTAAAACCAACGA 59.416 50.000 16.64 0.00 0.00 3.85
705 744 3.120477 CGCAGCTGTAAAACCAACGAATA 60.120 43.478 16.64 0.00 0.00 1.75
707 746 4.391358 CAGCTGTAAAACCAACGAATACG 58.609 43.478 5.25 0.00 45.75 3.06
831 1981 8.572855 AGATTTCTTTCTTAATCCTGAACCTG 57.427 34.615 0.00 0.00 32.43 4.00
832 1982 8.386264 AGATTTCTTTCTTAATCCTGAACCTGA 58.614 33.333 0.00 0.00 32.43 3.86
833 1983 8.940397 ATTTCTTTCTTAATCCTGAACCTGAA 57.060 30.769 0.00 0.00 0.00 3.02
884 2039 2.090210 AGACCCCTCCAACCCAAAAATT 60.090 45.455 0.00 0.00 0.00 1.82
964 2124 2.109799 CGCCGCCCTCATCAATCT 59.890 61.111 0.00 0.00 0.00 2.40
972 2132 2.738643 GCCCTCATCAATCTCGAACGAA 60.739 50.000 0.00 0.00 0.00 3.85
987 2147 1.218316 CGAAGCTAGGGTTTCCGCT 59.782 57.895 0.00 0.00 38.33 5.52
989 2149 0.462225 GAAGCTAGGGTTTCCGCTCC 60.462 60.000 0.00 0.00 38.33 4.70
1122 2282 1.966451 GCCGTTCCTCACCAAGGTG 60.966 63.158 13.03 13.03 46.32 4.00
1134 2294 1.270625 ACCAAGGTGTACGACATGGTG 60.271 52.381 13.57 0.00 42.04 4.17
1291 2451 3.118482 CCAGCTCAACACCTATGTGAGAT 60.118 47.826 5.05 0.00 45.76 2.75
1310 2470 3.535962 CCCTCAGCCTCCTCGCTC 61.536 72.222 0.00 0.00 36.82 5.03
1435 2595 1.065401 TGTGCTATTGCGGCTAATTGC 59.935 47.619 17.31 17.31 43.34 3.56
1454 2614 9.834628 CTAATTGCGAATTTAGTCCAAGTTAAA 57.165 29.630 0.00 0.00 32.38 1.52
1596 2756 5.460646 AGAACTTGTGGCAATACAATTTCG 58.539 37.500 17.05 5.04 46.31 3.46
1832 2993 4.614946 GGAATGCATGCTATTGAAACTCC 58.385 43.478 20.33 9.30 0.00 3.85
1893 3054 9.676861 ACCAAACTTTATTTATGGTAGGAGTAC 57.323 33.333 0.00 0.00 42.38 2.73
1966 3128 9.787435 TTAATAGTATCCTGACTGTTGTGTTTT 57.213 29.630 0.00 0.00 33.41 2.43
2071 3245 7.783596 TGGAACTTTGTTTTACCTACCCAAATA 59.216 33.333 0.00 0.00 0.00 1.40
2121 3295 6.605119 TGATGAGTGTCTATCAGTATCCAGA 58.395 40.000 0.00 0.00 0.00 3.86
2227 3401 2.346847 GTGCTGAATACAAGAGCAGACG 59.653 50.000 0.00 0.00 36.10 4.18
2373 3549 5.192176 TGCAATGAAATCAGTGGTAGCATA 58.808 37.500 12.19 0.00 41.70 3.14
2378 3554 6.925610 TGAAATCAGTGGTAGCATAATGAC 57.074 37.500 0.00 0.00 0.00 3.06
2408 3584 9.959721 TTATTTACTCTAGAGAAAACCTTGCAT 57.040 29.630 26.57 10.75 0.00 3.96
2410 3586 9.959721 ATTTACTCTAGAGAAAACCTTGCATAA 57.040 29.630 26.57 6.82 0.00 1.90
2411 3587 9.787435 TTTACTCTAGAGAAAACCTTGCATAAA 57.213 29.630 26.57 12.06 0.00 1.40
2412 3588 9.959721 TTACTCTAGAGAAAACCTTGCATAAAT 57.040 29.630 26.57 0.00 0.00 1.40
2413 3589 8.870075 ACTCTAGAGAAAACCTTGCATAAATT 57.130 30.769 26.57 0.00 0.00 1.82
2414 3590 8.734386 ACTCTAGAGAAAACCTTGCATAAATTG 58.266 33.333 26.57 0.00 0.00 2.32
2445 3621 6.992063 TTTTTGGATGCTCTCTATGTTCTC 57.008 37.500 0.00 0.00 0.00 2.87
2446 3622 5.946942 TTTGGATGCTCTCTATGTTCTCT 57.053 39.130 0.00 0.00 0.00 3.10
2447 3623 7.423844 TTTTGGATGCTCTCTATGTTCTCTA 57.576 36.000 0.00 0.00 0.00 2.43
2448 3624 7.609097 TTTGGATGCTCTCTATGTTCTCTAT 57.391 36.000 0.00 0.00 0.00 1.98
2449 3625 6.832520 TGGATGCTCTCTATGTTCTCTATC 57.167 41.667 0.00 0.00 0.00 2.08
2450 3626 6.551085 TGGATGCTCTCTATGTTCTCTATCT 58.449 40.000 0.00 0.00 0.00 1.98
2451 3627 7.009550 TGGATGCTCTCTATGTTCTCTATCTT 58.990 38.462 0.00 0.00 0.00 2.40
2452 3628 7.176515 TGGATGCTCTCTATGTTCTCTATCTTC 59.823 40.741 0.00 0.00 0.00 2.87
2453 3629 7.176515 GGATGCTCTCTATGTTCTCTATCTTCA 59.823 40.741 0.00 0.00 0.00 3.02
2454 3630 7.509141 TGCTCTCTATGTTCTCTATCTTCAG 57.491 40.000 0.00 0.00 0.00 3.02
2455 3631 7.059788 TGCTCTCTATGTTCTCTATCTTCAGT 58.940 38.462 0.00 0.00 0.00 3.41
2456 3632 7.559533 TGCTCTCTATGTTCTCTATCTTCAGTT 59.440 37.037 0.00 0.00 0.00 3.16
2457 3633 8.413229 GCTCTCTATGTTCTCTATCTTCAGTTT 58.587 37.037 0.00 0.00 0.00 2.66
2504 3739 4.701651 TGGTGAACTTATCCATGCTTCTTG 59.298 41.667 0.00 0.00 0.00 3.02
2554 3791 0.846693 ATAGATGGGAGTGGGCCAAC 59.153 55.000 8.40 0.26 0.00 3.77
2563 3800 3.961414 TGGGCCAACGAGGGGTTC 61.961 66.667 2.13 0.00 36.49 3.62
3100 4337 1.000274 GAAGCATTTTTGTCGGCCACT 60.000 47.619 2.24 0.00 0.00 4.00
3252 4489 5.069318 TGAAGACATGCATCTGTGGTTTAA 58.931 37.500 0.00 0.00 0.00 1.52
3347 4584 5.009631 TGGAAGCACAGCATAACTACAATT 58.990 37.500 0.00 0.00 0.00 2.32
3366 4603 6.731467 ACAATTACCCTCAACATGGTATTCT 58.269 36.000 0.00 0.00 36.99 2.40
3392 4629 3.463533 TTGATGTACGCCGAATGTTTG 57.536 42.857 0.00 0.00 0.00 2.93
3413 4650 7.041508 TGTTTGTGTTGTTCTTTTTCTGCAAAT 60.042 29.630 0.00 0.00 0.00 2.32
3415 4652 5.288232 TGTGTTGTTCTTTTTCTGCAAATCG 59.712 36.000 0.00 0.00 0.00 3.34
3447 4686 8.190784 ACTGTATTTTATGTAGCTGCCAATTTC 58.809 33.333 0.00 0.00 0.00 2.17
3530 4769 5.736951 TTTGCAAAGTTTATACCATGCCT 57.263 34.783 8.05 0.00 36.21 4.75
3540 4779 1.213296 TACCATGCCTTCTCCTTCCC 58.787 55.000 0.00 0.00 0.00 3.97
3541 4780 1.153086 CCATGCCTTCTCCTTCCCG 60.153 63.158 0.00 0.00 0.00 5.14
3542 4781 1.604378 CATGCCTTCTCCTTCCCGT 59.396 57.895 0.00 0.00 0.00 5.28
3543 4782 0.745845 CATGCCTTCTCCTTCCCGTG 60.746 60.000 0.00 0.00 0.00 4.94
3564 4803 6.851609 CGTGATGTCAGGGAAATGAATTTTA 58.148 36.000 0.00 0.00 0.00 1.52
3566 4805 7.975616 CGTGATGTCAGGGAAATGAATTTTATT 59.024 33.333 0.00 0.00 0.00 1.40
3567 4806 9.657419 GTGATGTCAGGGAAATGAATTTTATTT 57.343 29.630 0.00 0.00 0.00 1.40
3570 4809 9.880157 ATGTCAGGGAAATGAATTTTATTTCTG 57.120 29.630 19.85 13.96 41.80 3.02
3571 4810 8.869109 TGTCAGGGAAATGAATTTTATTTCTGT 58.131 29.630 19.85 9.53 41.80 3.41
3572 4811 9.358872 GTCAGGGAAATGAATTTTATTTCTGTC 57.641 33.333 19.85 12.81 41.80 3.51
3573 4812 9.312904 TCAGGGAAATGAATTTTATTTCTGTCT 57.687 29.630 19.85 14.17 41.80 3.41
3574 4813 9.362539 CAGGGAAATGAATTTTATTTCTGTCTG 57.637 33.333 19.85 18.90 41.80 3.51
3595 4834 1.696063 TTAATACTCCCTCCGTCCGG 58.304 55.000 0.00 0.00 0.00 5.14
3596 4835 0.846015 TAATACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
3597 4836 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
3599 4838 1.856539 TACTCCCTCCGTCCGGAAGT 61.857 60.000 16.46 11.87 44.66 3.01
3600 4839 1.077212 CTCCCTCCGTCCGGAAGTA 60.077 63.158 16.46 0.00 44.66 2.24
3601 4840 1.379044 TCCCTCCGTCCGGAAGTAC 60.379 63.158 16.46 0.00 44.66 2.73
3602 4841 1.379576 CCCTCCGTCCGGAAGTACT 60.380 63.158 16.46 0.00 44.66 2.73
3603 4842 0.969409 CCCTCCGTCCGGAAGTACTT 60.969 60.000 16.46 8.13 44.66 2.24
3604 4843 0.172803 CCTCCGTCCGGAAGTACTTG 59.827 60.000 14.14 0.00 44.66 3.16
3605 4844 0.886563 CTCCGTCCGGAAGTACTTGT 59.113 55.000 14.14 0.00 44.66 3.16
3606 4845 0.883833 TCCGTCCGGAAGTACTTGTC 59.116 55.000 14.14 4.21 42.05 3.18
3607 4846 0.599558 CCGTCCGGAAGTACTTGTCA 59.400 55.000 14.14 0.00 37.50 3.58
3608 4847 1.203994 CCGTCCGGAAGTACTTGTCAT 59.796 52.381 14.14 0.00 37.50 3.06
3609 4848 2.353406 CCGTCCGGAAGTACTTGTCATT 60.353 50.000 14.14 0.00 37.50 2.57
3610 4849 2.666508 CGTCCGGAAGTACTTGTCATTG 59.333 50.000 14.14 0.00 0.00 2.82
3611 4850 3.613193 CGTCCGGAAGTACTTGTCATTGA 60.613 47.826 14.14 0.00 0.00 2.57
3612 4851 4.312443 GTCCGGAAGTACTTGTCATTGAA 58.688 43.478 14.14 0.00 0.00 2.69
3613 4852 4.753107 GTCCGGAAGTACTTGTCATTGAAA 59.247 41.667 14.14 0.00 0.00 2.69
3614 4853 5.411669 GTCCGGAAGTACTTGTCATTGAAAT 59.588 40.000 14.14 0.00 0.00 2.17
3615 4854 5.411361 TCCGGAAGTACTTGTCATTGAAATG 59.589 40.000 14.14 0.00 37.75 2.32
3616 4855 5.391950 CCGGAAGTACTTGTCATTGAAATGG 60.392 44.000 14.14 0.00 37.03 3.16
3617 4856 5.411361 CGGAAGTACTTGTCATTGAAATGGA 59.589 40.000 14.14 0.00 37.03 3.41
3618 4857 6.094048 CGGAAGTACTTGTCATTGAAATGGAT 59.906 38.462 14.14 0.00 37.03 3.41
3619 4858 7.253422 GGAAGTACTTGTCATTGAAATGGATG 58.747 38.462 14.14 0.00 37.03 3.51
3620 4859 7.094205 GGAAGTACTTGTCATTGAAATGGATGT 60.094 37.037 14.14 2.77 37.03 3.06
3621 4860 8.862325 AAGTACTTGTCATTGAAATGGATGTA 57.138 30.769 7.48 2.01 37.03 2.29
3622 4861 9.466497 AAGTACTTGTCATTGAAATGGATGTAT 57.534 29.630 7.48 0.00 37.03 2.29
3623 4862 9.113838 AGTACTTGTCATTGAAATGGATGTATC 57.886 33.333 3.31 0.00 37.03 2.24
3624 4863 9.113838 GTACTTGTCATTGAAATGGATGTATCT 57.886 33.333 3.31 0.00 37.03 1.98
3626 4865 9.113838 ACTTGTCATTGAAATGGATGTATCTAC 57.886 33.333 3.31 0.00 37.03 2.59
3627 4866 9.112725 CTTGTCATTGAAATGGATGTATCTACA 57.887 33.333 3.31 0.00 37.52 2.74
3628 4867 9.631257 TTGTCATTGAAATGGATGTATCTACAT 57.369 29.630 2.53 2.53 40.94 2.29
3629 4868 9.059260 TGTCATTGAAATGGATGTATCTACATG 57.941 33.333 7.55 0.00 39.70 3.21
3630 4869 9.060347 GTCATTGAAATGGATGTATCTACATGT 57.940 33.333 2.69 2.69 39.70 3.21
3682 4921 8.183536 TCATCCATTTTGATGACAAGTAATTCG 58.816 33.333 0.00 0.00 44.65 3.34
3683 4922 6.851609 TCCATTTTGATGACAAGTAATTCGG 58.148 36.000 0.00 0.00 37.32 4.30
3684 4923 6.035843 CCATTTTGATGACAAGTAATTCGGG 58.964 40.000 0.00 0.00 37.32 5.14
3685 4924 4.695217 TTTGATGACAAGTAATTCGGGC 57.305 40.909 0.00 0.00 37.32 6.13
3686 4925 2.276201 TGATGACAAGTAATTCGGGCG 58.724 47.619 0.00 0.00 0.00 6.13
3687 4926 1.597663 GATGACAAGTAATTCGGGCGG 59.402 52.381 0.00 0.00 0.00 6.13
3688 4927 0.609151 TGACAAGTAATTCGGGCGGA 59.391 50.000 0.00 0.00 0.00 5.54
3689 4928 1.287425 GACAAGTAATTCGGGCGGAG 58.713 55.000 0.00 0.00 0.00 4.63
3690 4929 0.107848 ACAAGTAATTCGGGCGGAGG 60.108 55.000 0.00 0.00 0.00 4.30
3691 4930 0.814010 CAAGTAATTCGGGCGGAGGG 60.814 60.000 0.00 0.00 0.00 4.30
3692 4931 0.979187 AAGTAATTCGGGCGGAGGGA 60.979 55.000 0.00 0.00 0.00 4.20
3693 4932 1.069258 GTAATTCGGGCGGAGGGAG 59.931 63.158 0.00 0.00 0.00 4.30
3706 4945 3.181469 GCGGAGGGAGTATGTTGTTATGA 60.181 47.826 0.00 0.00 0.00 2.15
3751 4990 9.243637 GTGATTCTATACAAATCTGACTCACTC 57.756 37.037 0.00 0.00 35.72 3.51
3926 5309 2.737252 GCTGTGTACTTTAGCAGTCACC 59.263 50.000 10.36 0.00 36.88 4.02
4027 5413 1.262683 GCAGCGGCATTTAGATGTCTC 59.737 52.381 3.18 0.00 40.72 3.36
4033 5419 4.499865 GCGGCATTTAGATGTCTCACTAGA 60.500 45.833 0.00 0.00 35.71 2.43
4068 5454 8.934507 ACTTAGATGTGTGATAGAACTTTAGC 57.065 34.615 0.00 0.00 0.00 3.09
4069 5455 8.531982 ACTTAGATGTGTGATAGAACTTTAGCA 58.468 33.333 0.00 0.00 0.00 3.49
4070 5456 9.539825 CTTAGATGTGTGATAGAACTTTAGCAT 57.460 33.333 0.00 0.00 0.00 3.79
4071 5457 7.783090 AGATGTGTGATAGAACTTTAGCATG 57.217 36.000 0.00 0.00 0.00 4.06
4072 5458 7.559486 AGATGTGTGATAGAACTTTAGCATGA 58.441 34.615 0.00 0.00 0.00 3.07
4073 5459 8.209584 AGATGTGTGATAGAACTTTAGCATGAT 58.790 33.333 0.00 0.00 0.00 2.45
4074 5460 8.743085 ATGTGTGATAGAACTTTAGCATGATT 57.257 30.769 0.00 0.00 0.00 2.57
4075 5461 8.201554 TGTGTGATAGAACTTTAGCATGATTC 57.798 34.615 0.00 0.00 0.00 2.52
4076 5462 8.043113 TGTGTGATAGAACTTTAGCATGATTCT 58.957 33.333 0.00 0.00 34.16 2.40
4077 5463 8.333908 GTGTGATAGAACTTTAGCATGATTCTG 58.666 37.037 0.00 0.00 32.11 3.02
4078 5464 8.043113 TGTGATAGAACTTTAGCATGATTCTGT 58.957 33.333 0.00 0.00 32.11 3.41
4079 5465 8.887717 GTGATAGAACTTTAGCATGATTCTGTT 58.112 33.333 0.00 0.00 32.11 3.16
4080 5466 8.886719 TGATAGAACTTTAGCATGATTCTGTTG 58.113 33.333 0.00 0.00 32.11 3.33
4081 5467 5.947443 AGAACTTTAGCATGATTCTGTTGC 58.053 37.500 0.00 0.00 36.63 4.17
4082 5468 5.474532 AGAACTTTAGCATGATTCTGTTGCA 59.525 36.000 0.00 0.00 38.84 4.08
4083 5469 5.710513 ACTTTAGCATGATTCTGTTGCAA 57.289 34.783 0.00 0.00 38.84 4.08
4084 5470 6.276832 ACTTTAGCATGATTCTGTTGCAAT 57.723 33.333 0.59 0.00 38.84 3.56
4085 5471 7.395190 ACTTTAGCATGATTCTGTTGCAATA 57.605 32.000 0.59 0.00 38.84 1.90
4086 5472 7.478322 ACTTTAGCATGATTCTGTTGCAATAG 58.522 34.615 16.45 16.45 38.84 1.73
4087 5473 7.121759 ACTTTAGCATGATTCTGTTGCAATAGT 59.878 33.333 20.91 4.64 38.84 2.12
4088 5474 8.504812 TTTAGCATGATTCTGTTGCAATAGTA 57.495 30.769 20.91 13.37 38.84 1.82
4089 5475 8.681486 TTAGCATGATTCTGTTGCAATAGTAT 57.319 30.769 20.91 17.32 38.84 2.12
4090 5476 7.578310 AGCATGATTCTGTTGCAATAGTATT 57.422 32.000 20.91 8.63 38.84 1.89
4091 5477 7.646314 AGCATGATTCTGTTGCAATAGTATTC 58.354 34.615 20.91 15.89 38.84 1.75
4092 5478 7.283807 AGCATGATTCTGTTGCAATAGTATTCA 59.716 33.333 20.91 19.84 38.84 2.57
4093 5479 7.916977 GCATGATTCTGTTGCAATAGTATTCAA 59.083 33.333 20.91 9.43 36.40 2.69
4094 5480 9.791820 CATGATTCTGTTGCAATAGTATTCAAA 57.208 29.630 20.91 8.78 0.00 2.69
4152 5579 3.882888 TGCAATAGTATTAGGTTGCTGCC 59.117 43.478 9.87 0.00 45.28 4.85
4153 5580 3.253432 GCAATAGTATTAGGTTGCTGCCC 59.747 47.826 0.00 0.00 42.61 5.36
4154 5581 4.718961 CAATAGTATTAGGTTGCTGCCCT 58.281 43.478 0.00 0.00 36.04 5.19
4155 5582 5.133221 CAATAGTATTAGGTTGCTGCCCTT 58.867 41.667 2.74 0.00 33.35 3.95
4157 5584 2.576191 AGTATTAGGTTGCTGCCCTTCA 59.424 45.455 2.74 0.00 33.35 3.02
4159 5586 1.838112 TTAGGTTGCTGCCCTTCATG 58.162 50.000 2.74 0.00 33.35 3.07
4160 5587 0.698238 TAGGTTGCTGCCCTTCATGT 59.302 50.000 2.74 0.00 33.35 3.21
4161 5588 0.178953 AGGTTGCTGCCCTTCATGTT 60.179 50.000 0.00 0.00 0.00 2.71
4163 5590 0.668401 GTTGCTGCCCTTCATGTTGC 60.668 55.000 0.00 0.00 0.00 4.17
4164 5591 0.828762 TTGCTGCCCTTCATGTTGCT 60.829 50.000 0.00 0.00 0.00 3.91
4165 5592 1.214589 GCTGCCCTTCATGTTGCTG 59.785 57.895 0.00 0.00 0.00 4.41
4166 5593 1.214589 CTGCCCTTCATGTTGCTGC 59.785 57.895 0.00 0.00 0.00 5.25
4170 5669 0.901580 CCCTTCATGTTGCTGCCCTT 60.902 55.000 0.00 0.00 0.00 3.95
4196 5695 7.760794 TCTTGGTTGATATGAATGTCATTTTGC 59.239 33.333 0.00 0.00 38.26 3.68
4206 5705 5.586243 TGAATGTCATTTTGCTCTAGTAGGC 59.414 40.000 0.00 0.69 0.00 3.93
4227 5729 2.223502 CGCTAGGTTCAGTTCGATGCTA 60.224 50.000 0.00 0.00 0.00 3.49
4277 5780 4.081476 GGAATCATTTTGCTGTAGGGCTTT 60.081 41.667 0.00 0.00 0.00 3.51
4278 5781 3.940209 TCATTTTGCTGTAGGGCTTTG 57.060 42.857 0.00 0.00 0.00 2.77
4279 5782 3.230134 TCATTTTGCTGTAGGGCTTTGT 58.770 40.909 0.00 0.00 0.00 2.83
4280 5783 3.640967 TCATTTTGCTGTAGGGCTTTGTT 59.359 39.130 0.00 0.00 0.00 2.83
4281 5784 3.451141 TTTTGCTGTAGGGCTTTGTTG 57.549 42.857 0.00 0.00 0.00 3.33
4282 5785 1.327303 TTGCTGTAGGGCTTTGTTGG 58.673 50.000 0.00 0.00 0.00 3.77
4312 5815 5.385198 TCCTACTGATTCAGTTGCCTTTTT 58.615 37.500 23.53 0.00 42.59 1.94
4339 5842 4.225942 AGCTTCTGGGTGATCAAAGTATGA 59.774 41.667 0.00 0.00 43.67 2.15
4384 5887 3.584586 CCATTGGCAGCGAAAACAA 57.415 47.368 0.00 0.00 0.00 2.83
4401 5904 2.991250 ACAACAGTTGTGCTCAGAGTT 58.009 42.857 18.49 0.00 43.48 3.01
4402 5905 2.679837 ACAACAGTTGTGCTCAGAGTTG 59.320 45.455 18.49 19.40 43.48 3.16
4431 5935 4.032445 GTGTCGTATAGCAATGCTCGAAAA 59.968 41.667 12.53 4.30 40.44 2.29
4440 5944 4.923281 AGCAATGCTCGAAAAACATTAACC 59.077 37.500 0.00 0.00 30.62 2.85
4450 5954 3.883631 AAACATTAACCGTCGTTGACC 57.116 42.857 0.00 0.00 33.17 4.02
4514 6021 0.822164 TTTGCGCTACCCTACTCCTC 59.178 55.000 9.73 0.00 0.00 3.71
4521 6028 2.299521 CTACCCTACTCCTCGTCCTTG 58.700 57.143 0.00 0.00 0.00 3.61
4536 6043 3.462021 GTCCTTGCAGTAGAATAGCCAG 58.538 50.000 0.00 0.00 0.00 4.85
4541 6048 2.027285 TGCAGTAGAATAGCCAGCAACA 60.027 45.455 0.00 0.00 0.00 3.33
4572 6085 5.869344 TCACTCTGTATATGCTGTTGTGTTC 59.131 40.000 17.25 0.00 0.00 3.18
4672 6191 6.698766 CGGTTTTCTAGTACGCCTTTATGTAT 59.301 38.462 0.00 0.00 0.00 2.29
4674 6193 7.042254 GGTTTTCTAGTACGCCTTTATGTATGG 60.042 40.741 0.00 0.00 0.00 2.74
4675 6194 5.130292 TCTAGTACGCCTTTATGTATGGC 57.870 43.478 0.00 0.00 42.27 4.40
4698 6217 2.364973 TGCATGGACGGGAGGCTA 60.365 61.111 0.00 0.00 38.60 3.93
4720 6239 3.027170 GCGAGAACCATGCACACGG 62.027 63.158 0.00 0.00 0.00 4.94
4749 6269 0.400213 TTTGCTCCCGGACATGAACT 59.600 50.000 0.73 0.00 0.00 3.01
4758 6278 4.844085 TCCCGGACATGAACTATTCCATAT 59.156 41.667 0.73 0.00 0.00 1.78
4759 6279 4.937620 CCCGGACATGAACTATTCCATATG 59.062 45.833 0.73 0.00 0.00 1.78
4766 6286 4.779696 TGAACTATTCCATATGCACTGCA 58.220 39.130 6.09 6.09 44.86 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.643764 CCTTACGGTGCAATTATATTGTTCAAG 59.356 37.037 0.00 0.00 0.00 3.02
1 2 7.476667 CCTTACGGTGCAATTATATTGTTCAA 58.523 34.615 0.00 0.00 0.00 2.69
2 3 6.459024 GCCTTACGGTGCAATTATATTGTTCA 60.459 38.462 0.00 0.00 0.00 3.18
3 4 5.912955 GCCTTACGGTGCAATTATATTGTTC 59.087 40.000 0.00 0.00 0.00 3.18
4 5 5.358442 TGCCTTACGGTGCAATTATATTGTT 59.642 36.000 0.00 0.00 33.87 2.83
5 6 4.884744 TGCCTTACGGTGCAATTATATTGT 59.115 37.500 0.00 0.00 33.87 2.71
6 7 5.008613 ACTGCCTTACGGTGCAATTATATTG 59.991 40.000 0.00 0.00 36.16 1.90
7 8 5.130350 ACTGCCTTACGGTGCAATTATATT 58.870 37.500 0.00 0.00 36.16 1.28
8 9 4.714632 ACTGCCTTACGGTGCAATTATAT 58.285 39.130 0.00 0.00 36.16 0.86
9 10 4.145365 ACTGCCTTACGGTGCAATTATA 57.855 40.909 0.00 0.00 36.16 0.98
10 11 2.999331 ACTGCCTTACGGTGCAATTAT 58.001 42.857 0.00 0.00 36.16 1.28
11 12 2.483014 ACTGCCTTACGGTGCAATTA 57.517 45.000 0.00 0.00 36.16 1.40
12 13 1.616159 AACTGCCTTACGGTGCAATT 58.384 45.000 0.00 0.00 38.15 2.32
13 14 1.616159 AAACTGCCTTACGGTGCAAT 58.384 45.000 0.00 0.00 38.15 3.56
14 15 2.257691 TAAACTGCCTTACGGTGCAA 57.742 45.000 0.00 0.00 38.15 4.08
15 16 2.483014 ATAAACTGCCTTACGGTGCA 57.517 45.000 0.00 0.00 38.15 4.57
16 17 3.528532 AGTATAAACTGCCTTACGGTGC 58.471 45.455 0.00 0.00 38.15 5.01
17 18 5.416947 AGAAGTATAAACTGCCTTACGGTG 58.583 41.667 0.00 0.00 38.15 4.94
18 19 5.672421 AGAAGTATAAACTGCCTTACGGT 57.328 39.130 0.00 0.00 40.66 4.83
19 20 6.980051 AAAGAAGTATAAACTGCCTTACGG 57.020 37.500 0.00 0.00 35.62 4.02
20 21 7.961283 GGAAAAAGAAGTATAAACTGCCTTACG 59.039 37.037 0.00 0.00 35.62 3.18
21 22 9.011095 AGGAAAAAGAAGTATAAACTGCCTTAC 57.989 33.333 0.00 0.00 35.62 2.34
22 23 9.010029 CAGGAAAAAGAAGTATAAACTGCCTTA 57.990 33.333 0.00 0.00 35.62 2.69
23 24 7.724061 TCAGGAAAAAGAAGTATAAACTGCCTT 59.276 33.333 0.00 0.00 35.62 4.35
24 25 7.175119 GTCAGGAAAAAGAAGTATAAACTGCCT 59.825 37.037 0.00 0.00 35.62 4.75
25 26 7.175119 AGTCAGGAAAAAGAAGTATAAACTGCC 59.825 37.037 0.00 0.00 35.62 4.85
26 27 8.100508 AGTCAGGAAAAAGAAGTATAAACTGC 57.899 34.615 0.00 0.00 35.62 4.40
31 32 9.924650 GAGTGTAGTCAGGAAAAAGAAGTATAA 57.075 33.333 0.00 0.00 0.00 0.98
32 33 8.242053 CGAGTGTAGTCAGGAAAAAGAAGTATA 58.758 37.037 0.00 0.00 0.00 1.47
33 34 7.039923 TCGAGTGTAGTCAGGAAAAAGAAGTAT 60.040 37.037 0.00 0.00 0.00 2.12
34 35 6.263842 TCGAGTGTAGTCAGGAAAAAGAAGTA 59.736 38.462 0.00 0.00 0.00 2.24
35 36 5.068723 TCGAGTGTAGTCAGGAAAAAGAAGT 59.931 40.000 0.00 0.00 0.00 3.01
36 37 5.529791 TCGAGTGTAGTCAGGAAAAAGAAG 58.470 41.667 0.00 0.00 0.00 2.85
37 38 5.524971 TCGAGTGTAGTCAGGAAAAAGAA 57.475 39.130 0.00 0.00 0.00 2.52
38 39 5.524971 TTCGAGTGTAGTCAGGAAAAAGA 57.475 39.130 0.00 0.00 0.00 2.52
39 40 7.313646 TCTATTCGAGTGTAGTCAGGAAAAAG 58.686 38.462 0.00 0.00 0.00 2.27
40 41 7.223260 TCTATTCGAGTGTAGTCAGGAAAAA 57.777 36.000 0.00 0.00 0.00 1.94
41 42 6.829229 TCTATTCGAGTGTAGTCAGGAAAA 57.171 37.500 0.00 0.00 0.00 2.29
42 43 6.657966 TCTTCTATTCGAGTGTAGTCAGGAAA 59.342 38.462 0.00 0.00 0.00 3.13
43 44 6.093771 GTCTTCTATTCGAGTGTAGTCAGGAA 59.906 42.308 0.00 0.00 0.00 3.36
44 45 5.585445 GTCTTCTATTCGAGTGTAGTCAGGA 59.415 44.000 0.00 0.00 0.00 3.86
45 46 5.587043 AGTCTTCTATTCGAGTGTAGTCAGG 59.413 44.000 0.00 0.00 0.00 3.86
46 47 6.671614 AGTCTTCTATTCGAGTGTAGTCAG 57.328 41.667 0.00 0.00 0.00 3.51
47 48 7.064371 GTGTAGTCTTCTATTCGAGTGTAGTCA 59.936 40.741 0.00 0.00 0.00 3.41
48 49 7.278424 AGTGTAGTCTTCTATTCGAGTGTAGTC 59.722 40.741 0.00 0.00 0.00 2.59
49 50 7.104939 AGTGTAGTCTTCTATTCGAGTGTAGT 58.895 38.462 0.00 0.00 0.00 2.73
50 51 7.542534 AGTGTAGTCTTCTATTCGAGTGTAG 57.457 40.000 0.00 0.00 0.00 2.74
51 52 8.037166 TGTAGTGTAGTCTTCTATTCGAGTGTA 58.963 37.037 0.00 0.00 0.00 2.90
52 53 6.877855 TGTAGTGTAGTCTTCTATTCGAGTGT 59.122 38.462 0.00 0.00 0.00 3.55
53 54 7.304919 TGTAGTGTAGTCTTCTATTCGAGTG 57.695 40.000 0.00 0.00 0.00 3.51
54 55 7.414319 GCTTGTAGTGTAGTCTTCTATTCGAGT 60.414 40.741 0.00 0.00 0.00 4.18
55 56 6.908284 GCTTGTAGTGTAGTCTTCTATTCGAG 59.092 42.308 0.00 0.00 0.00 4.04
56 57 6.183360 GGCTTGTAGTGTAGTCTTCTATTCGA 60.183 42.308 0.00 0.00 0.00 3.71
57 58 5.972382 GGCTTGTAGTGTAGTCTTCTATTCG 59.028 44.000 0.00 0.00 0.00 3.34
58 59 7.102847 AGGCTTGTAGTGTAGTCTTCTATTC 57.897 40.000 0.00 0.00 0.00 1.75
59 60 8.770010 ATAGGCTTGTAGTGTAGTCTTCTATT 57.230 34.615 0.00 0.00 0.00 1.73
61 62 9.863650 AATATAGGCTTGTAGTGTAGTCTTCTA 57.136 33.333 0.00 0.00 0.00 2.10
62 63 8.770010 AATATAGGCTTGTAGTGTAGTCTTCT 57.230 34.615 0.00 0.00 0.00 2.85
63 64 9.896263 GTAATATAGGCTTGTAGTGTAGTCTTC 57.104 37.037 0.00 0.00 0.00 2.87
64 65 8.858094 GGTAATATAGGCTTGTAGTGTAGTCTT 58.142 37.037 0.00 0.00 0.00 3.01
65 66 7.174599 CGGTAATATAGGCTTGTAGTGTAGTCT 59.825 40.741 0.00 0.00 0.00 3.24
66 67 7.303998 CGGTAATATAGGCTTGTAGTGTAGTC 58.696 42.308 0.00 0.00 0.00 2.59
67 68 6.294397 GCGGTAATATAGGCTTGTAGTGTAGT 60.294 42.308 0.00 0.00 0.00 2.73
68 69 6.091437 GCGGTAATATAGGCTTGTAGTGTAG 58.909 44.000 0.00 0.00 0.00 2.74
69 70 5.535783 TGCGGTAATATAGGCTTGTAGTGTA 59.464 40.000 0.00 0.00 0.00 2.90
70 71 4.342951 TGCGGTAATATAGGCTTGTAGTGT 59.657 41.667 0.00 0.00 0.00 3.55
71 72 4.878439 TGCGGTAATATAGGCTTGTAGTG 58.122 43.478 0.00 0.00 0.00 2.74
72 73 5.740290 ATGCGGTAATATAGGCTTGTAGT 57.260 39.130 0.00 0.00 0.00 2.73
73 74 8.718102 ATTAATGCGGTAATATAGGCTTGTAG 57.282 34.615 0.00 0.00 0.00 2.74
75 76 9.509956 TTTATTAATGCGGTAATATAGGCTTGT 57.490 29.630 0.00 0.00 0.00 3.16
129 130 9.151471 GCTTCATATAGTAATCGCAGGAAAATA 57.849 33.333 0.00 0.00 0.00 1.40
130 131 7.661437 TGCTTCATATAGTAATCGCAGGAAAAT 59.339 33.333 0.00 0.00 0.00 1.82
131 132 6.989759 TGCTTCATATAGTAATCGCAGGAAAA 59.010 34.615 0.00 0.00 0.00 2.29
132 133 6.521162 TGCTTCATATAGTAATCGCAGGAAA 58.479 36.000 0.00 0.00 0.00 3.13
133 134 6.096673 TGCTTCATATAGTAATCGCAGGAA 57.903 37.500 0.00 0.00 0.00 3.36
134 135 5.722021 TGCTTCATATAGTAATCGCAGGA 57.278 39.130 0.00 0.00 0.00 3.86
135 136 5.696270 TGTTGCTTCATATAGTAATCGCAGG 59.304 40.000 0.00 0.00 0.00 4.85
136 137 6.769608 TGTTGCTTCATATAGTAATCGCAG 57.230 37.500 0.00 0.00 0.00 5.18
137 138 8.708742 GTTATGTTGCTTCATATAGTAATCGCA 58.291 33.333 3.17 0.00 31.58 5.10
138 139 8.169268 GGTTATGTTGCTTCATATAGTAATCGC 58.831 37.037 3.17 0.00 31.58 4.58
139 140 9.203421 TGGTTATGTTGCTTCATATAGTAATCG 57.797 33.333 3.17 0.00 31.58 3.34
142 143 9.325198 CAGTGGTTATGTTGCTTCATATAGTAA 57.675 33.333 3.17 0.00 31.58 2.24
143 144 8.482943 ACAGTGGTTATGTTGCTTCATATAGTA 58.517 33.333 0.00 0.00 31.58 1.82
144 145 7.338710 ACAGTGGTTATGTTGCTTCATATAGT 58.661 34.615 0.00 0.00 31.58 2.12
145 146 7.306807 CGACAGTGGTTATGTTGCTTCATATAG 60.307 40.741 0.00 0.00 31.58 1.31
146 147 6.478673 CGACAGTGGTTATGTTGCTTCATATA 59.521 38.462 0.00 0.00 31.58 0.86
147 148 5.294306 CGACAGTGGTTATGTTGCTTCATAT 59.706 40.000 0.00 0.00 31.58 1.78
148 149 4.629634 CGACAGTGGTTATGTTGCTTCATA 59.370 41.667 0.00 0.00 0.00 2.15
149 150 3.436704 CGACAGTGGTTATGTTGCTTCAT 59.563 43.478 0.00 0.00 0.00 2.57
150 151 2.805671 CGACAGTGGTTATGTTGCTTCA 59.194 45.455 0.00 0.00 0.00 3.02
151 152 2.806244 ACGACAGTGGTTATGTTGCTTC 59.194 45.455 0.00 0.00 35.77 3.86
152 153 2.548057 CACGACAGTGGTTATGTTGCTT 59.452 45.455 0.00 0.00 44.34 3.91
153 154 2.143122 CACGACAGTGGTTATGTTGCT 58.857 47.619 0.00 0.00 44.34 3.91
154 155 2.594529 CACGACAGTGGTTATGTTGC 57.405 50.000 0.00 0.00 44.34 4.17
160 161 9.871070 TTCAAAAGTGAGACACGACAGTGGTTA 62.871 40.741 3.63 0.00 42.98 2.85
162 163 7.809411 TTCAAAAGTGAGACACGACAGTGGT 62.809 44.000 3.63 0.00 42.98 4.16
163 164 5.444416 TTCAAAAGTGAGACACGACAGTGG 61.444 45.833 3.63 0.00 42.98 4.00
164 165 3.616821 TTCAAAAGTGAGACACGACAGTG 59.383 43.478 0.00 0.00 43.69 3.66
165 166 3.520290 TCAAAAGTGAGACACGACAGT 57.480 42.857 0.00 0.00 39.64 3.55
166 167 4.857871 TTTCAAAAGTGAGACACGACAG 57.142 40.909 0.00 0.00 39.64 3.51
167 168 5.811399 ATTTTCAAAAGTGAGACACGACA 57.189 34.783 0.00 0.00 39.64 4.35
168 169 6.711579 TGTATTTTCAAAAGTGAGACACGAC 58.288 36.000 0.00 0.00 39.64 4.34
169 170 6.912203 TGTATTTTCAAAAGTGAGACACGA 57.088 33.333 0.00 0.00 39.64 4.35
170 171 8.560576 AATTGTATTTTCAAAAGTGAGACACG 57.439 30.769 0.00 0.00 39.64 4.49
174 175 9.248291 GCTCAAATTGTATTTTCAAAAGTGAGA 57.752 29.630 15.02 0.00 36.62 3.27
175 176 8.209869 CGCTCAAATTGTATTTTCAAAAGTGAG 58.790 33.333 0.00 0.00 37.03 3.51
176 177 7.918033 TCGCTCAAATTGTATTTTCAAAAGTGA 59.082 29.630 0.00 0.00 0.00 3.41
177 178 7.998212 GTCGCTCAAATTGTATTTTCAAAAGTG 59.002 33.333 0.00 0.00 0.00 3.16
178 179 7.704472 TGTCGCTCAAATTGTATTTTCAAAAGT 59.296 29.630 0.00 0.00 0.00 2.66
179 180 8.060020 TGTCGCTCAAATTGTATTTTCAAAAG 57.940 30.769 0.00 0.00 0.00 2.27
180 181 7.993821 TGTCGCTCAAATTGTATTTTCAAAA 57.006 28.000 0.00 0.00 0.00 2.44
181 182 7.864882 TGATGTCGCTCAAATTGTATTTTCAAA 59.135 29.630 0.00 0.00 0.00 2.69
182 183 7.366513 TGATGTCGCTCAAATTGTATTTTCAA 58.633 30.769 0.00 0.00 0.00 2.69
183 184 6.907741 TGATGTCGCTCAAATTGTATTTTCA 58.092 32.000 0.00 0.00 0.00 2.69
184 185 7.795431 TTGATGTCGCTCAAATTGTATTTTC 57.205 32.000 0.00 0.00 32.35 2.29
185 186 7.651304 TGTTTGATGTCGCTCAAATTGTATTTT 59.349 29.630 9.72 0.00 44.48 1.82
186 187 7.144661 TGTTTGATGTCGCTCAAATTGTATTT 58.855 30.769 9.72 0.00 44.48 1.40
187 188 6.676950 TGTTTGATGTCGCTCAAATTGTATT 58.323 32.000 9.72 0.00 44.48 1.89
188 189 6.252967 TGTTTGATGTCGCTCAAATTGTAT 57.747 33.333 9.72 0.00 44.48 2.29
189 190 5.681337 TGTTTGATGTCGCTCAAATTGTA 57.319 34.783 9.72 0.00 44.48 2.41
190 191 4.566545 TGTTTGATGTCGCTCAAATTGT 57.433 36.364 9.72 0.00 44.48 2.71
191 192 5.403166 ACAATGTTTGATGTCGCTCAAATTG 59.597 36.000 9.72 11.97 44.48 2.32
192 193 5.403166 CACAATGTTTGATGTCGCTCAAATT 59.597 36.000 9.72 1.58 44.48 1.82
193 194 4.919168 CACAATGTTTGATGTCGCTCAAAT 59.081 37.500 9.72 0.00 44.48 2.32
194 195 4.202000 ACACAATGTTTGATGTCGCTCAAA 60.202 37.500 4.25 4.25 41.56 2.69
195 196 3.314913 ACACAATGTTTGATGTCGCTCAA 59.685 39.130 0.00 0.00 33.42 3.02
196 197 2.877786 ACACAATGTTTGATGTCGCTCA 59.122 40.909 0.00 0.00 0.00 4.26
197 198 3.542712 ACACAATGTTTGATGTCGCTC 57.457 42.857 0.00 0.00 0.00 5.03
198 199 4.094887 GGATACACAATGTTTGATGTCGCT 59.905 41.667 0.00 0.00 0.00 4.93
199 200 4.142708 TGGATACACAATGTTTGATGTCGC 60.143 41.667 0.00 0.00 46.17 5.19
200 201 5.544136 TGGATACACAATGTTTGATGTCG 57.456 39.130 0.00 0.00 46.17 4.35
257 258 9.353999 CGTAAATCGGATGAGATTCACATAATA 57.646 33.333 0.00 0.00 39.69 0.98
258 259 7.872993 ACGTAAATCGGATGAGATTCACATAAT 59.127 33.333 0.00 0.00 44.69 1.28
259 260 7.207383 ACGTAAATCGGATGAGATTCACATAA 58.793 34.615 0.00 0.00 44.69 1.90
260 261 6.745116 ACGTAAATCGGATGAGATTCACATA 58.255 36.000 0.00 0.00 44.69 2.29
261 262 5.601662 ACGTAAATCGGATGAGATTCACAT 58.398 37.500 0.00 0.00 44.69 3.21
262 263 5.006153 ACGTAAATCGGATGAGATTCACA 57.994 39.130 0.00 0.00 44.69 3.58
263 264 5.968387 AACGTAAATCGGATGAGATTCAC 57.032 39.130 0.00 0.00 44.69 3.18
264 265 6.103330 TCAAACGTAAATCGGATGAGATTCA 58.897 36.000 0.00 0.00 44.69 2.57
265 266 6.583912 TCAAACGTAAATCGGATGAGATTC 57.416 37.500 0.00 0.00 44.69 2.52
269 270 4.027621 CGTCTCAAACGTAAATCGGATGAG 60.028 45.833 13.87 13.87 46.99 2.90
270 271 3.855379 CGTCTCAAACGTAAATCGGATGA 59.145 43.478 0.00 0.00 46.42 2.92
271 272 4.164802 CGTCTCAAACGTAAATCGGATG 57.835 45.455 0.00 0.00 46.42 3.51
282 283 4.791734 CGTACAACGCACGTCTCAAACG 62.792 54.545 0.00 0.00 45.81 3.60
283 284 1.395080 CGTACAACGCACGTCTCAAAC 60.395 52.381 0.00 0.00 33.65 2.93
284 285 0.847670 CGTACAACGCACGTCTCAAA 59.152 50.000 0.00 0.00 33.65 2.69
285 286 2.497804 CGTACAACGCACGTCTCAA 58.502 52.632 0.00 0.00 33.65 3.02
286 287 4.215330 CGTACAACGCACGTCTCA 57.785 55.556 0.00 0.00 33.65 3.27
296 297 3.924686 ACTAGTAAGCATGCACGTACAAC 59.075 43.478 21.98 6.69 0.00 3.32
297 298 4.182693 ACTAGTAAGCATGCACGTACAA 57.817 40.909 21.98 0.00 0.00 2.41
298 299 3.861276 ACTAGTAAGCATGCACGTACA 57.139 42.857 21.98 8.72 0.00 2.90
299 300 4.624024 TCAAACTAGTAAGCATGCACGTAC 59.376 41.667 21.98 17.66 0.00 3.67
300 301 4.624024 GTCAAACTAGTAAGCATGCACGTA 59.376 41.667 21.98 6.05 0.00 3.57
301 302 3.432252 GTCAAACTAGTAAGCATGCACGT 59.568 43.478 21.98 7.14 0.00 4.49
302 303 3.431912 TGTCAAACTAGTAAGCATGCACG 59.568 43.478 21.98 3.52 0.00 5.34
303 304 5.049405 ACTTGTCAAACTAGTAAGCATGCAC 60.049 40.000 21.98 10.48 32.65 4.57
304 305 5.049474 CACTTGTCAAACTAGTAAGCATGCA 60.049 40.000 21.98 0.00 32.65 3.96
305 306 5.049405 ACACTTGTCAAACTAGTAAGCATGC 60.049 40.000 10.51 10.51 32.65 4.06
306 307 6.545504 ACACTTGTCAAACTAGTAAGCATG 57.454 37.500 0.00 0.00 32.65 4.06
307 308 8.848474 ATTACACTTGTCAAACTAGTAAGCAT 57.152 30.769 0.00 0.00 32.65 3.79
308 309 8.671384 AATTACACTTGTCAAACTAGTAAGCA 57.329 30.769 0.00 0.00 32.65 3.91
309 310 8.228464 GGAATTACACTTGTCAAACTAGTAAGC 58.772 37.037 0.00 0.00 32.65 3.09
310 311 9.268268 TGGAATTACACTTGTCAAACTAGTAAG 57.732 33.333 0.00 0.00 32.65 2.34
311 312 9.268268 CTGGAATTACACTTGTCAAACTAGTAA 57.732 33.333 0.00 0.00 32.65 2.24
312 313 8.426489 ACTGGAATTACACTTGTCAAACTAGTA 58.574 33.333 0.00 0.00 32.65 1.82
313 314 7.280356 ACTGGAATTACACTTGTCAAACTAGT 58.720 34.615 0.00 0.00 34.63 2.57
314 315 7.095187 GGACTGGAATTACACTTGTCAAACTAG 60.095 40.741 9.93 0.00 0.00 2.57
315 316 6.708949 GGACTGGAATTACACTTGTCAAACTA 59.291 38.462 9.93 0.00 0.00 2.24
316 317 5.531287 GGACTGGAATTACACTTGTCAAACT 59.469 40.000 9.93 0.00 0.00 2.66
317 318 5.298276 TGGACTGGAATTACACTTGTCAAAC 59.702 40.000 9.93 0.00 0.00 2.93
318 319 5.441500 TGGACTGGAATTACACTTGTCAAA 58.558 37.500 9.93 0.00 0.00 2.69
347 348 0.163788 CCAACGTCATTGCTGTCGTC 59.836 55.000 0.00 0.00 44.40 4.20
364 365 2.280797 GCAGTCGCCAAGTCACCA 60.281 61.111 0.00 0.00 0.00 4.17
366 367 2.355837 TCGCAGTCGCCAAGTCAC 60.356 61.111 0.00 0.00 35.26 3.67
374 381 2.872001 CGAGAGTGTCGCAGTCGC 60.872 66.667 0.00 8.12 43.03 5.19
386 394 0.309302 CCAGATGGCGAGTACGAGAG 59.691 60.000 0.00 0.00 42.66 3.20
387 395 2.405143 CCAGATGGCGAGTACGAGA 58.595 57.895 0.00 0.00 42.66 4.04
439 460 6.768381 AGAACCTCTCAAAGAAAAAGACGAAT 59.232 34.615 0.00 0.00 0.00 3.34
456 477 1.731720 GCTGCATTCGAAGAACCTCT 58.268 50.000 3.35 0.00 45.90 3.69
563 594 1.066303 AGCGTTTTCCACATTTTGCGA 59.934 42.857 0.00 0.00 0.00 5.10
594 626 1.066502 GGGTTACGCCATGGCAATTTT 60.067 47.619 34.93 15.98 42.06 1.82
599 631 2.270850 GAGGGTTACGCCATGGCA 59.729 61.111 34.93 15.49 42.06 4.92
700 739 7.044314 GGAAATTGCTTTGGAATAACGTATTCG 60.044 37.037 0.00 0.00 44.24 3.34
702 741 6.750039 CGGAAATTGCTTTGGAATAACGTATT 59.250 34.615 0.00 0.00 0.00 1.89
705 744 4.481463 CGGAAATTGCTTTGGAATAACGT 58.519 39.130 0.00 0.00 0.00 3.99
707 746 4.180817 CCCGGAAATTGCTTTGGAATAAC 58.819 43.478 0.73 0.00 0.00 1.89
870 2020 2.496679 TGGGGAATTTTTGGGTTGGA 57.503 45.000 0.00 0.00 0.00 3.53
884 2039 1.341581 GGGTTCGGATGATTTTGGGGA 60.342 52.381 0.00 0.00 0.00 4.81
964 2124 1.067354 GGAAACCCTAGCTTCGTTCGA 60.067 52.381 0.00 0.00 0.00 3.71
972 2132 2.368011 GGGAGCGGAAACCCTAGCT 61.368 63.158 0.00 0.00 42.56 3.32
1291 2451 3.077556 GCGAGGAGGCTGAGGGAA 61.078 66.667 0.00 0.00 0.00 3.97
1299 2459 2.509561 GGAAACGAGCGAGGAGGC 60.510 66.667 0.00 0.00 0.00 4.70
1341 2501 4.566545 ATTCAACTCAAAATCACACGCA 57.433 36.364 0.00 0.00 0.00 5.24
1343 2503 5.518812 TCCAATTCAACTCAAAATCACACG 58.481 37.500 0.00 0.00 0.00 4.49
1345 2505 5.927689 GCATCCAATTCAACTCAAAATCACA 59.072 36.000 0.00 0.00 0.00 3.58
1435 2595 7.962918 CCAGACATTTAACTTGGACTAAATTCG 59.037 37.037 0.00 0.00 0.00 3.34
1454 2614 1.064314 ACCGAGAGCTACTCCAGACAT 60.064 52.381 7.36 0.00 42.18 3.06
1596 2756 3.314541 AGTCCGCATATTACCCGAATC 57.685 47.619 0.00 0.00 0.00 2.52
2019 3193 2.527487 GCATAAAAGAAATGCTCACGCG 59.473 45.455 3.53 3.53 45.05 6.01
2071 3245 6.650427 AGCACAGCATCATTCATCAAATAT 57.350 33.333 0.00 0.00 0.00 1.28
2121 3295 1.134848 GCAAGAATCTGGCTCGAGACT 60.135 52.381 21.24 0.00 0.00 3.24
2206 3380 2.346847 CGTCTGCTCTTGTATTCAGCAC 59.653 50.000 0.00 0.00 0.00 4.40
2378 3554 9.945904 AAGGTTTTCTCTAGAGTAAATAACAGG 57.054 33.333 22.56 0.00 31.92 4.00
2422 3598 6.715280 AGAGAACATAGAGAGCATCCAAAAA 58.285 36.000 0.00 0.00 33.66 1.94
2423 3599 6.305272 AGAGAACATAGAGAGCATCCAAAA 57.695 37.500 0.00 0.00 33.66 2.44
2424 3600 5.946942 AGAGAACATAGAGAGCATCCAAA 57.053 39.130 0.00 0.00 33.66 3.28
2425 3601 7.009550 AGATAGAGAACATAGAGAGCATCCAA 58.990 38.462 0.00 0.00 33.66 3.53
2426 3602 6.551085 AGATAGAGAACATAGAGAGCATCCA 58.449 40.000 0.00 0.00 33.66 3.41
2427 3603 7.176515 TGAAGATAGAGAACATAGAGAGCATCC 59.823 40.741 0.00 0.00 33.66 3.51
2428 3604 8.109705 TGAAGATAGAGAACATAGAGAGCATC 57.890 38.462 0.00 0.00 0.00 3.91
2429 3605 7.725397 ACTGAAGATAGAGAACATAGAGAGCAT 59.275 37.037 0.00 0.00 0.00 3.79
2430 3606 7.059788 ACTGAAGATAGAGAACATAGAGAGCA 58.940 38.462 0.00 0.00 0.00 4.26
2431 3607 7.510549 ACTGAAGATAGAGAACATAGAGAGC 57.489 40.000 0.00 0.00 0.00 4.09
2438 3614 9.678260 ATGCTTAAAACTGAAGATAGAGAACAT 57.322 29.630 0.00 0.00 0.00 2.71
2439 3615 9.507329 AATGCTTAAAACTGAAGATAGAGAACA 57.493 29.630 0.00 0.00 0.00 3.18
2440 3616 9.980780 GAATGCTTAAAACTGAAGATAGAGAAC 57.019 33.333 0.00 0.00 0.00 3.01
2441 3617 9.950496 AGAATGCTTAAAACTGAAGATAGAGAA 57.050 29.630 0.00 0.00 0.00 2.87
2504 3739 8.815189 GTCAACTTTACGAAATCCCTAGATAAC 58.185 37.037 0.00 0.00 30.42 1.89
2554 3791 2.743179 GCCCCTAAGGAACCCCTCG 61.743 68.421 0.00 0.00 43.48 4.63
2563 3800 1.114627 GATGCTTTTGGCCCCTAAGG 58.885 55.000 0.00 0.00 40.92 2.69
3028 4265 1.414181 ACAGGAGGCCGATACTGAATG 59.586 52.381 20.61 4.86 35.08 2.67
3100 4337 2.906389 AGGACTAGAGATTGGTTGTGCA 59.094 45.455 0.00 0.00 0.00 4.57
3252 4489 0.251519 AGTAGGTTCCCCGTCTTCGT 60.252 55.000 0.00 0.00 35.12 3.85
3347 4584 6.441222 ACTAGAGAATACCATGTTGAGGGTA 58.559 40.000 0.00 0.00 42.60 3.69
3366 4603 3.853831 TTCGGCGTACATCAAACTAGA 57.146 42.857 6.85 0.00 0.00 2.43
3392 4629 5.288472 ACGATTTGCAGAAAAAGAACAACAC 59.712 36.000 0.00 0.00 0.00 3.32
3413 4650 5.518847 GCTACATAAAATACAGTCTGCACGA 59.481 40.000 0.00 0.00 0.00 4.35
3415 4652 6.709643 CAGCTACATAAAATACAGTCTGCAC 58.290 40.000 0.00 0.00 0.00 4.57
3429 4668 5.820423 ACATACGAAATTGGCAGCTACATAA 59.180 36.000 0.00 0.00 0.00 1.90
3530 4769 1.550524 CTGACATCACGGGAAGGAGAA 59.449 52.381 0.00 0.00 0.00 2.87
3540 4779 4.970662 AATTCATTTCCCTGACATCACG 57.029 40.909 0.00 0.00 0.00 4.35
3541 4780 9.657419 AAATAAAATTCATTTCCCTGACATCAC 57.343 29.630 0.00 0.00 32.27 3.06
3542 4781 9.874205 GAAATAAAATTCATTTCCCTGACATCA 57.126 29.630 11.70 0.00 36.71 3.07
3564 4803 7.339482 GGAGGGAGTATTAAACAGACAGAAAT 58.661 38.462 0.00 0.00 0.00 2.17
3566 4805 5.105473 CGGAGGGAGTATTAAACAGACAGAA 60.105 44.000 0.00 0.00 0.00 3.02
3567 4806 4.401519 CGGAGGGAGTATTAAACAGACAGA 59.598 45.833 0.00 0.00 0.00 3.41
3569 4808 4.091549 ACGGAGGGAGTATTAAACAGACA 58.908 43.478 0.00 0.00 0.00 3.41
3570 4809 4.441217 GGACGGAGGGAGTATTAAACAGAC 60.441 50.000 0.00 0.00 0.00 3.51
3571 4810 3.703052 GGACGGAGGGAGTATTAAACAGA 59.297 47.826 0.00 0.00 0.00 3.41
3572 4811 3.490419 CGGACGGAGGGAGTATTAAACAG 60.490 52.174 0.00 0.00 0.00 3.16
3573 4812 2.428171 CGGACGGAGGGAGTATTAAACA 59.572 50.000 0.00 0.00 0.00 2.83
3574 4813 2.223900 CCGGACGGAGGGAGTATTAAAC 60.224 54.545 4.40 0.00 37.50 2.01
3577 4816 0.846015 TCCGGACGGAGGGAGTATTA 59.154 55.000 9.76 0.00 39.76 0.98
3578 4817 0.032813 TTCCGGACGGAGGGAGTATT 60.033 55.000 13.64 0.00 46.06 1.89
3579 4818 0.467659 CTTCCGGACGGAGGGAGTAT 60.468 60.000 14.28 0.00 46.06 2.12
3580 4819 1.077212 CTTCCGGACGGAGGGAGTA 60.077 63.158 14.28 0.00 46.06 2.59
3581 4820 2.362632 CTTCCGGACGGAGGGAGT 60.363 66.667 14.28 0.00 46.06 3.85
3582 4821 1.077212 TACTTCCGGACGGAGGGAG 60.077 63.158 23.78 16.33 46.06 4.30
3583 4822 1.379044 GTACTTCCGGACGGAGGGA 60.379 63.158 23.78 15.14 46.06 4.20
3595 4834 7.820648 ACATCCATTTCAATGACAAGTACTTC 58.179 34.615 4.77 0.00 38.70 3.01
3596 4835 7.765695 ACATCCATTTCAATGACAAGTACTT 57.234 32.000 1.12 1.12 38.70 2.24
3597 4836 9.113838 GATACATCCATTTCAATGACAAGTACT 57.886 33.333 0.81 0.00 38.70 2.73
3600 4839 9.113838 GTAGATACATCCATTTCAATGACAAGT 57.886 33.333 0.81 0.00 38.70 3.16
3601 4840 9.112725 TGTAGATACATCCATTTCAATGACAAG 57.887 33.333 0.81 0.00 38.70 3.16
3602 4841 9.631257 ATGTAGATACATCCATTTCAATGACAA 57.369 29.630 0.81 0.00 42.96 3.18
3603 4842 9.059260 CATGTAGATACATCCATTTCAATGACA 57.941 33.333 2.47 0.00 44.57 3.58
3604 4843 9.060347 ACATGTAGATACATCCATTTCAATGAC 57.940 33.333 0.00 0.00 44.57 3.06
3657 4896 7.433131 CCGAATTACTTGTCATCAAAATGGATG 59.567 37.037 0.00 0.00 44.78 3.51
3658 4897 7.416664 CCCGAATTACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
3659 4898 6.127758 CCCGAATTACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
3660 4899 6.035843 CCCGAATTACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
3661 4900 5.516339 GCCCGAATTACTTGTCATCAAAATG 59.484 40.000 0.00 0.00 32.87 2.32
3662 4901 5.650543 GCCCGAATTACTTGTCATCAAAAT 58.349 37.500 0.00 0.00 32.87 1.82
3663 4902 4.378978 CGCCCGAATTACTTGTCATCAAAA 60.379 41.667 0.00 0.00 32.87 2.44
3664 4903 3.126171 CGCCCGAATTACTTGTCATCAAA 59.874 43.478 0.00 0.00 32.87 2.69
3665 4904 2.675844 CGCCCGAATTACTTGTCATCAA 59.324 45.455 0.00 0.00 0.00 2.57
3666 4905 2.276201 CGCCCGAATTACTTGTCATCA 58.724 47.619 0.00 0.00 0.00 3.07
3667 4906 1.597663 CCGCCCGAATTACTTGTCATC 59.402 52.381 0.00 0.00 0.00 2.92
3668 4907 1.208535 TCCGCCCGAATTACTTGTCAT 59.791 47.619 0.00 0.00 0.00 3.06
3669 4908 0.609151 TCCGCCCGAATTACTTGTCA 59.391 50.000 0.00 0.00 0.00 3.58
3670 4909 1.287425 CTCCGCCCGAATTACTTGTC 58.713 55.000 0.00 0.00 0.00 3.18
3671 4910 0.107848 CCTCCGCCCGAATTACTTGT 60.108 55.000 0.00 0.00 0.00 3.16
3672 4911 0.814010 CCCTCCGCCCGAATTACTTG 60.814 60.000 0.00 0.00 0.00 3.16
3673 4912 0.979187 TCCCTCCGCCCGAATTACTT 60.979 55.000 0.00 0.00 0.00 2.24
3674 4913 1.382146 TCCCTCCGCCCGAATTACT 60.382 57.895 0.00 0.00 0.00 2.24
3675 4914 1.069258 CTCCCTCCGCCCGAATTAC 59.931 63.158 0.00 0.00 0.00 1.89
3676 4915 0.106066 TACTCCCTCCGCCCGAATTA 60.106 55.000 0.00 0.00 0.00 1.40
3677 4916 0.763223 ATACTCCCTCCGCCCGAATT 60.763 55.000 0.00 0.00 0.00 2.17
3678 4917 1.152312 ATACTCCCTCCGCCCGAAT 60.152 57.895 0.00 0.00 0.00 3.34
3679 4918 2.131709 CATACTCCCTCCGCCCGAA 61.132 63.158 0.00 0.00 0.00 4.30
3680 4919 2.520982 CATACTCCCTCCGCCCGA 60.521 66.667 0.00 0.00 0.00 5.14
3681 4920 2.432300 AACATACTCCCTCCGCCCG 61.432 63.158 0.00 0.00 0.00 6.13
3682 4921 1.146263 CAACATACTCCCTCCGCCC 59.854 63.158 0.00 0.00 0.00 6.13
3683 4922 0.252197 AACAACATACTCCCTCCGCC 59.748 55.000 0.00 0.00 0.00 6.13
3684 4923 2.973694 TAACAACATACTCCCTCCGC 57.026 50.000 0.00 0.00 0.00 5.54
3685 4924 4.665833 TCATAACAACATACTCCCTCCG 57.334 45.455 0.00 0.00 0.00 4.63
3686 4925 5.930135 ACATCATAACAACATACTCCCTCC 58.070 41.667 0.00 0.00 0.00 4.30
3687 4926 7.225538 CAGAACATCATAACAACATACTCCCTC 59.774 40.741 0.00 0.00 0.00 4.30
3688 4927 7.050377 CAGAACATCATAACAACATACTCCCT 58.950 38.462 0.00 0.00 0.00 4.20
3689 4928 6.823689 ACAGAACATCATAACAACATACTCCC 59.176 38.462 0.00 0.00 0.00 4.30
3690 4929 7.849804 ACAGAACATCATAACAACATACTCC 57.150 36.000 0.00 0.00 0.00 3.85
3692 4931 9.944376 AGTAACAGAACATCATAACAACATACT 57.056 29.630 0.00 0.00 0.00 2.12
3706 4945 8.976353 AGAATCACTGAGATAGTAACAGAACAT 58.024 33.333 0.00 0.00 37.60 2.71
3751 4990 6.485984 AGTTATGGCATCAGCTGAAATAAGAG 59.514 38.462 22.50 6.04 41.70 2.85
3886 5269 7.940850 ACACAGCTACATTTTGTTCTGTTTAT 58.059 30.769 10.52 1.68 39.33 1.40
3903 5286 4.321750 GGTGACTGCTAAAGTACACAGCTA 60.322 45.833 12.68 2.07 40.07 3.32
3962 5345 5.477510 TGTTTTGTGCTTGTTGACAAAGAT 58.522 33.333 0.00 0.00 41.72 2.40
3967 5350 2.822561 TCCTGTTTTGTGCTTGTTGACA 59.177 40.909 0.00 0.00 0.00 3.58
3968 5351 3.502191 TCCTGTTTTGTGCTTGTTGAC 57.498 42.857 0.00 0.00 0.00 3.18
3969 5352 3.737663 GCATCCTGTTTTGTGCTTGTTGA 60.738 43.478 0.00 0.00 34.85 3.18
4009 5392 2.169352 AGTGAGACATCTAAATGCCGCT 59.831 45.455 0.00 0.00 36.26 5.52
4010 5393 2.555199 AGTGAGACATCTAAATGCCGC 58.445 47.619 0.00 0.00 36.26 6.53
4011 5394 5.188327 TCTAGTGAGACATCTAAATGCCG 57.812 43.478 0.00 0.00 36.26 5.69
4044 5430 8.932945 TGCTAAAGTTCTATCACACATCTAAG 57.067 34.615 0.00 0.00 0.00 2.18
4052 5438 8.043113 ACAGAATCATGCTAAAGTTCTATCACA 58.957 33.333 0.00 0.00 0.00 3.58
4053 5439 8.430801 ACAGAATCATGCTAAAGTTCTATCAC 57.569 34.615 0.00 0.00 0.00 3.06
4054 5440 8.886719 CAACAGAATCATGCTAAAGTTCTATCA 58.113 33.333 0.00 0.00 0.00 2.15
4055 5441 7.854916 GCAACAGAATCATGCTAAAGTTCTATC 59.145 37.037 0.00 0.00 37.12 2.08
4056 5442 7.337689 TGCAACAGAATCATGCTAAAGTTCTAT 59.662 33.333 7.11 0.00 40.66 1.98
4057 5443 6.654582 TGCAACAGAATCATGCTAAAGTTCTA 59.345 34.615 7.11 0.00 40.66 2.10
4058 5444 5.474532 TGCAACAGAATCATGCTAAAGTTCT 59.525 36.000 7.11 0.00 40.66 3.01
4059 5445 5.702865 TGCAACAGAATCATGCTAAAGTTC 58.297 37.500 7.11 0.00 40.66 3.01
4060 5446 5.710513 TGCAACAGAATCATGCTAAAGTT 57.289 34.783 7.11 0.00 40.66 2.66
4061 5447 5.710513 TTGCAACAGAATCATGCTAAAGT 57.289 34.783 0.00 0.00 40.66 2.66
4062 5448 7.478322 ACTATTGCAACAGAATCATGCTAAAG 58.522 34.615 12.63 4.68 40.66 1.85
4063 5449 7.395190 ACTATTGCAACAGAATCATGCTAAA 57.605 32.000 12.63 0.00 40.66 1.85
4064 5450 8.681486 ATACTATTGCAACAGAATCATGCTAA 57.319 30.769 12.63 2.06 40.66 3.09
4065 5451 8.681486 AATACTATTGCAACAGAATCATGCTA 57.319 30.769 12.63 0.00 40.66 3.49
4066 5452 7.283807 TGAATACTATTGCAACAGAATCATGCT 59.716 33.333 12.63 0.00 40.66 3.79
4067 5453 7.420002 TGAATACTATTGCAACAGAATCATGC 58.580 34.615 12.63 0.00 40.45 4.06
4068 5454 9.791820 TTTGAATACTATTGCAACAGAATCATG 57.208 29.630 12.63 0.00 0.00 3.07
4094 5480 9.851686 TGCTAAAGTTCTATCACATCCAAATAT 57.148 29.630 0.00 0.00 0.00 1.28
4095 5481 9.851686 ATGCTAAAGTTCTATCACATCCAAATA 57.148 29.630 0.00 0.00 0.00 1.40
4096 5482 8.627403 CATGCTAAAGTTCTATCACATCCAAAT 58.373 33.333 0.00 0.00 0.00 2.32
4097 5483 7.828717 TCATGCTAAAGTTCTATCACATCCAAA 59.171 33.333 0.00 0.00 0.00 3.28
4098 5484 7.337938 TCATGCTAAAGTTCTATCACATCCAA 58.662 34.615 0.00 0.00 0.00 3.53
4099 5485 6.888105 TCATGCTAAAGTTCTATCACATCCA 58.112 36.000 0.00 0.00 0.00 3.41
4100 5486 7.976135 ATCATGCTAAAGTTCTATCACATCC 57.024 36.000 0.00 0.00 0.00 3.51
4101 5487 9.270640 AGAATCATGCTAAAGTTCTATCACATC 57.729 33.333 0.00 0.00 0.00 3.06
4102 5488 9.053840 CAGAATCATGCTAAAGTTCTATCACAT 57.946 33.333 0.00 0.00 0.00 3.21
4118 5545 8.019669 CCTAATACTATTGCAACAGAATCATGC 58.980 37.037 12.63 0.00 40.45 4.06
4152 5579 0.529378 GAAGGGCAGCAACATGAAGG 59.471 55.000 0.00 0.00 0.00 3.46
4153 5580 1.542492 AGAAGGGCAGCAACATGAAG 58.458 50.000 0.00 0.00 0.00 3.02
4154 5581 1.614903 CAAGAAGGGCAGCAACATGAA 59.385 47.619 0.00 0.00 0.00 2.57
4155 5582 1.250328 CAAGAAGGGCAGCAACATGA 58.750 50.000 0.00 0.00 0.00 3.07
4157 5584 0.178953 ACCAAGAAGGGCAGCAACAT 60.179 50.000 0.00 0.00 43.89 2.71
4159 5586 0.032540 CAACCAAGAAGGGCAGCAAC 59.967 55.000 0.00 0.00 43.89 4.17
4160 5587 0.106268 TCAACCAAGAAGGGCAGCAA 60.106 50.000 0.00 0.00 43.89 3.91
4161 5588 0.112995 ATCAACCAAGAAGGGCAGCA 59.887 50.000 0.00 0.00 43.89 4.41
4163 5590 3.889815 TCATATCAACCAAGAAGGGCAG 58.110 45.455 0.00 0.00 43.89 4.85
4164 5591 4.314522 TTCATATCAACCAAGAAGGGCA 57.685 40.909 0.00 0.00 43.89 5.36
4165 5592 4.646492 ACATTCATATCAACCAAGAAGGGC 59.354 41.667 0.00 0.00 43.89 5.19
4166 5593 5.887598 TGACATTCATATCAACCAAGAAGGG 59.112 40.000 0.00 0.00 43.89 3.95
4170 5669 7.760794 GCAAAATGACATTCATATCAACCAAGA 59.239 33.333 0.05 0.00 35.76 3.02
4196 5695 2.550606 CTGAACCTAGCGCCTACTAGAG 59.449 54.545 2.29 0.00 41.92 2.43
4206 5705 0.924090 GCATCGAACTGAACCTAGCG 59.076 55.000 0.00 0.00 0.00 4.26
4227 5729 9.066892 TGCTGACTCATCTTTGTAAAATTAGTT 57.933 29.630 0.00 0.00 0.00 2.24
4245 5747 3.442977 AGCAAAATGATTCCTGCTGACTC 59.557 43.478 12.31 0.00 43.34 3.36
4250 5752 3.698040 CCTACAGCAAAATGATTCCTGCT 59.302 43.478 8.44 8.44 45.83 4.24
4252 5754 3.181483 GCCCTACAGCAAAATGATTCCTG 60.181 47.826 0.00 0.00 0.00 3.86
4277 5780 4.974645 ATCAGTAGGAGAACAACCAACA 57.025 40.909 0.00 0.00 0.00 3.33
4278 5781 5.305585 TGAATCAGTAGGAGAACAACCAAC 58.694 41.667 0.00 0.00 0.00 3.77
4279 5782 5.071788 ACTGAATCAGTAGGAGAACAACCAA 59.928 40.000 15.09 0.00 43.46 3.67
4280 5783 4.593206 ACTGAATCAGTAGGAGAACAACCA 59.407 41.667 15.09 0.00 43.46 3.67
4281 5784 5.153950 ACTGAATCAGTAGGAGAACAACC 57.846 43.478 15.09 0.00 43.46 3.77
4282 5785 5.106908 GCAACTGAATCAGTAGGAGAACAAC 60.107 44.000 17.04 0.00 44.62 3.32
4312 5815 3.507162 TTGATCACCCAGAAGCTGAAA 57.493 42.857 0.00 0.00 32.44 2.69
4376 5879 3.100817 CTGAGCACAACTGTTGTTTTCG 58.899 45.455 22.66 12.96 43.23 3.46
4384 5887 2.093500 TCACAACTCTGAGCACAACTGT 60.093 45.455 4.19 0.00 0.00 3.55
4401 5904 4.672409 CATTGCTATACGACACTCTCACA 58.328 43.478 0.00 0.00 0.00 3.58
4402 5905 3.487574 GCATTGCTATACGACACTCTCAC 59.512 47.826 0.16 0.00 0.00 3.51
4431 5935 2.836262 TGGTCAACGACGGTTAATGTT 58.164 42.857 0.00 0.00 33.72 2.71
4440 5944 2.579207 ATCCTGTATGGTCAACGACG 57.421 50.000 0.00 0.00 37.07 5.12
4514 6021 2.159099 TGGCTATTCTACTGCAAGGACG 60.159 50.000 0.00 0.00 39.30 4.79
4521 6028 2.632377 TGTTGCTGGCTATTCTACTGC 58.368 47.619 0.00 0.00 0.00 4.40
4536 6043 7.377928 GCATATACAGAGTGAATTTCATGTTGC 59.622 37.037 8.88 9.14 0.00 4.17
4541 6048 8.618677 CAACAGCATATACAGAGTGAATTTCAT 58.381 33.333 1.78 0.00 0.00 2.57
4572 6085 6.481976 TGTACAGAACAGGTTGACATTTACAG 59.518 38.462 0.00 0.00 33.01 2.74
4641 6154 2.091744 GCGTACTAGAAAACCGCTTCAC 59.908 50.000 0.00 0.00 41.06 3.18
4663 6176 1.956477 GCACCCTGGCCATACATAAAG 59.044 52.381 5.51 0.00 0.00 1.85
4672 6191 4.365111 GTCCATGCACCCTGGCCA 62.365 66.667 4.71 4.71 33.56 5.36
4675 6194 4.802051 CCCGTCCATGCACCCTGG 62.802 72.222 0.00 0.00 34.93 4.45
4698 6217 1.068333 GTGTGCATGGTTCTCGCAATT 60.068 47.619 0.00 0.00 37.41 2.32
4720 6239 1.658114 GGGAGCAAAAACGGGTGTC 59.342 57.895 0.00 0.00 0.00 3.67
4749 6269 3.553904 TGCTTGCAGTGCATATGGAATA 58.446 40.909 20.50 0.00 38.76 1.75
4758 6278 1.034356 AAGACAATGCTTGCAGTGCA 58.966 45.000 20.57 15.37 44.95 4.57
4759 6279 2.144482 AAAGACAATGCTTGCAGTGC 57.856 45.000 20.57 8.58 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.