>input_sequence_27925
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-------------------------------------------------------------------------------A
TGGGCTCCAGCAAAGGCTCGCCCCCGCCCTCCGGCGCCGGCCCCTCGTCTGCCGGGAATGCCCCCGCGCCGGTGGGTCCG
GCGCCGAGGCCGCCGGAGGTGGCGCCGTTCCTCACCAAGGTGTACGACATGGTGTCGGACGCGGCGACCGACAAGGTCAT
GTCGTGGACCGACGCCGGCAACAGCTTCGTGATCTGGGACGCGCACGCCTTCGAGCGCGACCTGCTCAGCCGCCACTTCA
AGCACCGCAACTTCAGCAGCTTCATACGCCAGCTCAACACCTATGTGAGATTCCCTCAGCCTCCTCGCTCGTTTCCGGTG
CGAGCCGGTTTTTTTTTTTTTGCGTGTGATTTTGAGTTGAATTGGATGCAATTGCTATCGCGGAGCATATGTTTCCTTTA
TTATAATTTCGTAATGTGCTATTGCGGCTAATTGCGAATTTAGTCCAAGTTAAATGTCTGGAGTAGCTCTCGGTGTAGCT
TAGACAAACCTGTGTTTTAATGCGTGATCATTTTCGCTTGAATCCAGTTTGTTACAGGCTGTTGCTTTGTTCAATTTGTG
CTTGTTGCGCTGAGAACTTGTGGCAATACAATTTCGA-TTCGGGTAATATGCGGACTTACCATTCCGGGTTAAAGCATTT
GTTCCAAATCTGTCCATGCTTTGGTATCCAGTAGTAAAAATGCTTTTAGCAGTCTTCTTTATATATATGAAATATAATTG
TGCGTGTGGCCAATGGAATTTTGTGGATCTGATCAAAATAACTACCGCTCGTAGCAGTTCTGCTGAACATGCCTTGAGTT
CTATTGGCACGGAATGCATGCTATTGAAACTCCTTTCTATATTTTGGATTCTGCATATTTGGCATCTACCAAACTTTATT
TATGGTAGGAGTACAAAAGAATGAAGCTACTTAATGTAGTGTCTTCGCTTCATGCTTAACTTAA-TAGTATCCTGACTGT
TGTGTTTTTGAATGAAATCAAATAAATGTTTCGTCTGCATTGACATAATATC------------TAATCTTCCGCGTGAG
CATTTCTTTTATGCTGGTTGGAACTTTGTTTTACCTACCCAAATATATTTGATGAATGATGCTGTGCTTTTGATGAGTGT
CTATCAGTATCCAGAGTCTCGAGCCAGATTCTTGCAGTCAGGGATTCAATACTTGTCAGCTTCTCCTTCCAATTTTTATA
CTGTTTCTTTCATGTCCATGTGCTGAATACAAGAGCAGACGGATTTTTTCTCACTGGATTGTATACATGCTCTTAAAGAT
TTTGTTGTGACCACATGAATTGCTGCTCTTGGCTCCATATACTTTTGGTAAAACTTCCTCATGAAGCATGTAACTTTCAA
CACTGCAATGAAATCAGTGGTAGCAT--AATGACCTGTTATTTACTCTAGAGAAAACCTTGCATAAATTGCGCTGTTTTT
TTGGATGCTCTCTATGTTCTCTATCTTCAGTTTTAAGCAT----------------------------------------
-------------------TCTAAGATATCTTATTTGGTGAACTTATCCATGCTTCTTG--TTATCTAGGGATTTCGTAA
AGTTGACCCTGATAGATGGGAGTGGGCCAACGAGGGGTTCCTTAGGGGCCAAAAGCATCTTCTGAAAATCATTAAGAGAA
AGAAGAGACCTCAGGAAGCAGGTCGTGAGTTGGAGAAGGCACCTGTCAAAGCTGCACCTGGTACTGAAAATATTGAAATA
GGAAGATATGGCGGGCTTGTAAAGGAGGTGGAAACCCTTAAGAGGGATAAAGCTCTTCTCATGAAGCAGCTTGTGGATCT
CAGGCTCTACCAGCAAAGCTCTAACCTTGAAGTCCAGAGTTTGATTCAGCGCCTTCAAGTAATGGAACAGAACCAGAAGC
AGATGATGGCACTTCTAGCAATCGTTGTCCAGAACCCTAGTCTTCTCAACCAGCTTGTGCAGCAGCAGCAGCAGCAGCGC
AGGAATAACTGCGTTTATGAGGATGGAAACAAGAAAAGGAGGTTCCCTGCTCTAGAGCAGGGTCCAGTAACTGATCATGA
GACTTCTGGCGCAGGGGCCGAAATCATTCAGTATCGGCCTCCTGTCCCTGAAACTTCTAGCCAAGTAATAGCAGATGAAG
CATTTTTGTCGGCCACTGCACAACCAATCTCTAGTCCTGCACTTAACATGCCCATGGACATCGACACTCAAACGACCTCG
GACAACCTCAACACACAAGGTTCATCTGGGGACATTTTTGCTGACATGCCTGCTCTACCAGACTTTGAAGACATGCATCT
GTGGTTTAACGAAGACGGGGAACCTACTTTAACTATTCAAGATTATGATGAGTCTCCCCAGTCAGGGCAGGACTGTCAGA
TGGAAGCACAGCATAACTACAATTACCCTCAACATGGTATTCTCTAGTTTGATGTACGCCGAATGTTTGTGTTGTTCTTT
TTCTGCAAATCGTGCAG--ACTGTATTTTATGTAGCTGCCAATTTCGTATGTCCAATGACACACTATGCACTTCATGTGC
ACAAGTGGAGTTCAGATTAGTAGGATTTTGCAAAGTTTATACCATGCCTTCTCCTTCCCGTGATGTCAGGGAAATGAATT
TTATTTCTGTCTGTTTAATACTCCCTCCGTCCGGAAGTACTTGTCATTGAAATGGATGTATCTACATGTATTTTAGTTCT
ATATACATCTATTTTCATCCATTTTGATGACAAGTAATTCGGGCGGAGGGAGTATGTTGTTATGATGTTCTGTTACTATC
TCAGTGATTCTATACAAATCTGACTCACTCTCTTATTTCAGCTGATGCCATAACTGAAGCATAG----------------
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>chr4B_1_TraesCS4B01G239700
CTTGAACAATATAATTGCACCGTAAGGCAGTTTATACTTCTTTTTCCTGACTACACTCGAATAGAAGACTACACTACAAG
CCTATATTACCGCATTAATAAATAATTACTGATTTTATTTAAATAAGAATATTTTCCTGCGATTACTATATGAAGCAACA
TAACCACTGTCGTGTCTCACTTTTGAAAATACAATTTGAGCGACATCAAACATTGTGTATCCATTTGATTTATATTTTTA
AAAACATTTATTTTTTATATTATGTGAATCTCATCCGATTTACGTTTGAGACGTGCGTTGTACGTGCATGCTTACTAGTT
TGACAAGTGTAATTCCAGTCCAAGTCCGACGACAGCAATGACGTTGGTGACT------TGGC-GACTGCGACACTCTCGT
ACTCGCCATCTGGCCCATCGTTCCAGGGCCAC-------------CGTGTGGATTCTCCATTCGTCTTTTTCTTTGAGAG
GTTCTTCGAATGCAGCGCTGCTTCCCAGCCCCCACCGGCCCCGC----------CCATGCCATCGAGCGGGACGCGACGC
AACCACGCTGGCTCTTGCGCCCCACAGAAAAAAT-CGCAAAATGTGGAAAACGCTCGCCGCACAGAAAATTGCCATG---
----GCGTAACCCTCACACACCGACACATGGGGCCCGACGCCTTCAGGCCCACAAGTCATCGTCGAATAAAAACACGGGA
GCGCAGCTGTAAAACCAACGAATACGT-TATTCCAAAGCAA-TTTCCGGGCACGCGCCTTGCGTGATCTGACGCACGCAC
AAATATCGCCGACCCTACCACATTTTTTTT----CGTTTTGAACT-----------------------------------
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------------------------------TCCATAGATTTCTTTCTTAATCCTGAACCTGAAGGCAGGCAGCCCAAACA
CGAACAAGTCGCAGACCCCT-----CCAACCCAAAAATTCCCCAAAATCATCCGAACCCAAACCGAAATCCCCACACCGA
TACGCCTTCCTCCTCCCGT-----CTCGCCGCCCTCATCAATCTCGAACGAAGCTAGGGTTTCCGCTCCCCGCACCGCCA
TGGGCTCCAGCAAAGGCTCGCCCCCGCCCTCCGGCGCCGGCCCCTCGTCTGCCGGGAATGCCCCCGCGCCGGTGGGTCCG
GCGCCGAGGCCGCCGGAGGTGGCGCCGTTCCTCACCAAGGTGTACGACATGGTGTCGGACGCGGCGACCGACAAGGTCAT
GTCGTGGACCGACGCCGGCAACAGCTTCGTGATCTGGGACGCGCACGCCTTCGAGCGCGACCTGCTCAGCCGCCACTTCA
AGCACCGCAACTTCAGCAGCTTCATACGCCAGCTCAACACCTATGTGAGATTCCCTCAGCCTCCTCGCTCGTTTCCGGTG
CGAGCCGGTTTTTTTTTTTTTGCGTGTGATTTTGAGTTGAATTGGATGCAATTGCTATCGCGGAGCATATGTTTCCTTTA
TTATAATTTCGTAATGTGCTATTGCGGCTAATTGCGAATTTAGTCCAAGTTAAATGTCTGGAGTAGCTCTCGGTGTAGCT
TAGACAAACCTGTGTTTTAATGCGTGATCATTTTCGCTTGAATCCAGTTTGTTACAGGCTGTTGCTTTGTTCAATTTGTG
CTTGTTGCGCTGAGAACTTGTGGCAATACAATTTCGA-TTCGGGTAATATGCGGACTTACCATTCCGGGTTAAAGCATTT
GTTCCAAATCTGTCCATGCTTTGGTATCCAGTAGTAAAAATGCTTTTAGCAGTCTTCTTTATATATATGAAATATAATTG
TGCGTGTGGCCAATGGAATTTTGTGGATCTGATCAAAATAACTACCGCTCGTAGCAGTTCTGCTGAACATGCCTTGAGTT
CTATTGGCACGGAATGCATGCTATTGAAACTCCTTTCTATATTTTGGATTCTGCATATTTGGCATCTACCAAACTTTATT
TATGGTAGGAGTACAAAAGAATGAAGCTACTTAATGTAGTGTCTTCGCTTCATGCTTAACTTAA-TAGTATCCTGACTGT
TGTGTTTTTGAATGAAATCAAATAAATGTTTCGTCTGCATTGACATAATATC------------TAATCTTCCGCGTGAG
CATTTCTTTTATGCTGGTTGGAACTTTGTTTTACCTACCCAAATATATTTGATGAATGATGCTGTGCTTTTGATGAGTGT
CTATCAGTATCCAGAGTCTCGAGCCAGATTCTTGCAGTCAGGGATTCAATACTTGTCAGCTTCTCCTTCCAATTTTTATA
CTGTTTCTTTCATGTCCATGTGCTGAATACAAGAGCAGACGGATTTTTTCTCACTGGATTGTATACATGCTCTTAAAGAT
TTTGTTGTGACCACATGAATTGCTGCTCTTGGCTCCATATACTTTTGGTAAAACTTCCTCATGAAGCATGTAACTTTCAA
CACTGCAATGAAATCAGTGGTAGCAT--AATGACCTGTTATTTACTCTAGAGAAAACCTTGCATAAATTGCGCTGTTTTT
TTGGATGCTCTCTATGTTCTCTATCTTCAGTTTTAAGCAT----------------------------------------
-------------------TCTAAGATATCTTATTTGGTGAACTTATCCATGCTTCTTG--TTATCTAGGGATTTCGTAA
AGTTGACCCTGATAGATGGGAGTGGGCCAACGAGGGGTTCCTTAGGGGCCAAAAGCATCTTCTGAAAATCATTAAGAGAA
AGAAGAGACCTCAGGAAGCAGGTCGTGAGTTGGAGAAGGCACCTGTCAAAGCTGCACCTGGTACTGAAAATATTGAAATA
GGAAGATATGGCGGGCTTGTAAAGGAGGTGGAAACCCTTAAGAGGGATAAAGCTCTTCTCATGAAGCAGCTTGTGGATCT
CAGGCTCTACCAGCAAAGCTCTAACCTTGAAGTCCAGAGTTTGATTCAGCGCCTTCAAGTAATGGAACAGAACCAGAAGC
AGATGATGGCACTTCTAGCAATCGTTGTCCAGAACCCTAGTCTTCTCAACCAGCTTGTGCAGCAGCAGCAGCAGCAGCGC
AGGAATAACTGCGTTTATGAGGATGGAAACAAGAAAAGGAGGTTCCCTGCTCTAGAGCAGGGTCCAGTAACTGATCATGA
GACTTCTGGCGCAGGGGCCGAAATCATTCAGTATCGGCCTCCTGTCCCTGAAACTTCTAGCCAAGTAATAGCAGATGAAG
CATTTTTGTCGGCCACTGCACAACCAATCTCTAGTCCTGCACTTAACATGCCCATGGACATCGACACTCAAACGACCTCG
GACAACCTCAACACACAAGGTTCATCTGGGGACATTTTTGCTGACATGCCTGCTCTACCAGACTTTGAAGACATGCATCT
GTGGTTTAACGAAGACGGGGAACCTACTTTAACTATTCAAGATTATGATGAGTCTCCCCAGTCAGGGCAGGACTGTCAGA
TGGAAGCACAGCATAACTACAATTACCCTCAACATGGTATTCTCTAGTTTGATGTACGCCGAATGTTTGTGTTGTTCTTT
TTCTGCAAATCGTGCAG--ACTGTATTTTATGTAGCTGCCAATTTCGTATGTCCAATGACACACTATGCACTTCATGTGC
ACAAGTGGAGTTCAGATTAGTAGGATTTTGCAAAGTTTATACCATGCCTTCTCCTTCCCGTGATGTCAGGGAAATGAATT
TTATTTCTGTCTGTTTAATACTCCCTCCGTCCGGAAGTACTTGTCATTGAAATGGATGTATCTACATGTATTTTAGTTCT
ATATACATCTATTTTCATCCATTTTGATGACAAGTAATTCGGGCGGAGGGAGTATGTTGTTATGATGTTCTGTTACTATC
TCAGTGATTCTATACAAATCTGACTCACTCTCTTATTTCAGCTGATGCCATAACTGAAGCATAGGTGGTGGTCTAGGAGC
ACATTGGGCAGCAACAT-----TAGGTTCGCAAGGGTCCATAAAAAGATCACCATTATGTTCTATTTACTGAAAGTTACT
TCGTA---------------------------------------------------------------------------
----------------------------------------------------------------TTTGATAAACAGAACA
AAATGTAGCTGTGTACTTTAGCAGTCACCAATGTCATCAAAATATAATCATGTTCAATTTGATAATCTTTGTCAACAAGC
ACAAAACAGGATGCATGCAGGAAAAAAAAGCAGCG---GCATTTAGATGTCTCACTAGATATTCAAATACTTAGATGTGT
GATAGAACTTTAGCATGATTCTGTTGCAATAGTATTCAAATATTTGGATGT-----------------------------
------------GATAGAACTTTAGCATGATTCTGTTGCAATAGTATTAGGTTGCTGCCCTTCATGTTGCTGCC------
------------------------------------------------------------------CTTCTTGGTTGATA
TGAATGTCATTTTGCTCTAGTAGGCGC---TAGGTTCAGTTCGATGCTAACTAATTTTACAAAGATGAGTCAGCAGGAAT
CA-TTTTGCTGTAGGGCTTTGTTGGTTGTTCTCCTACTGATTCAGTTGCCTTTTTTTCAGCTTCTGGGTGATCAAAGTAT
GAAGGCATGGTGATGCGTGAGGTGGGCGCCATTGGCAGCGAAAACAACAGTTGTGCTCAGAGTTGTGAGAGTGTCGTATA
GC-AATGCTCGAAAAACATTAACCGTCGTTGACCATACAGGATTCTTTTGTTGTTTTTTCGGGCATAGGACAGGGA-TTT
TTGCGCTACCCTACTC--CTCGTCCTTGCAGTAGAATAGCCAGCAACATGAAATTCACTC------TGTATATGCTGTTG
TGTTCTGTAAATGTCAACCTGTTCTGTACATTCTGTGAATTTCCAGCGAAAATGTAATGTTCCATTGACATTTGTGAAGC
GGTTTTCTAGTACGCC------TTTATGTATGGCCAGGGTGCATGGACGGGAGGCTAATTGCGAGAACCATGCACACGGA
CACC-CGTTTTTGCTCCCGGACATGAACTATTCCATATGCACTGCAAGCATTGTCTTTTTTTTCC
>chr4A_320
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-------------------------------------------------------------------------------T
TGACAAGTGTAATTCCAGTCCAAGTCCAACGACAGCAATGACGTCGATGACTTAGCCATGAC-GACTGCGACA--CTCAT
ACTCGCCATCTGGCCCAGCGTACCAGGGCCACATATCAGTCTCTCCGTGTGGATTCTCCCTTCGTCTTTTTCTTTGCGAG
GTTCTTCGAACGCAGCGCTGCTTCCCATCTCCCACCGACCCCGCCCATGCCATGCCATGCCATCGAGCGGGACGCGACGC
AACCACGCCGGCTCCTGCGCCCCACAGAAAAAAAACGCAAAATGTGGAAAACGCTCGCCGCACAGCAAATAATCATTGCG
TCATGCGTGACCCTCACACACCGACACGTGGGCCCGGACGCCCTCAGGTCCACAGGTCATCCTCGAATAAAAGCACGGGA
GCGCAGCTGTAAAACGAAGGCGTGCCT-TATTCCAAAGCAATTTTCCGGGCACGCGCCTTGCGTGATCTGACGCACGCAC
AAATATCGCCGACTCTACCACATTTTTTTT----CTTCTTCTTTTGAACTTCCCATAGATTTCGAGGAAAGTATCGTTTT
CCCCCCGAAATCCTCTCTGATGGATCAATTTCCCCCTCAACTCTAATACCGGATCAATCAACCCCTCAAATCTTTAAAAC
CGGATCAATCCCCCCCTAAAATGGTTTTGGACTTGATTTTGAGTGGTTTTGACCCAGATCGTGCACTTCTCTCGGTTATG
GCCGTGCACTTCGCGTCTTCAGTGCGCCCAGCTCGCCTCCGTGGCCGGCATGCTCGCCGCTTGCCGTCTTCATGGTCTCG
ACCAGGCTGCCGCAGAAGTACTCCCACTCCATGCCTACACGGACGCCGATGCTTCCCGAGAAGCCATCTGATGCCATGCT
CCTGATCAAGTCCGACTGCCCAGTGCGGGAACCGCTCTGTGTGCCTCGCACCGCACTGACCGGCGTCCCGCTTGGCCAGC
GCAGGAGACGAACTGCATCAGCACCATCGACGCGCTCATCCGGCCGCCCGTGATCATGCTCTGCTGCACCAGGCCCGCAT
TCTCTTCCTCCCGGCGAGCGGCGACGGTGTTCGAGGCGGCAACCACGCAGGCGTCGTTCTCGATGAGCGTCTCCAGCGTG
TCGGGGCCGCTGGAGGATGGCGGCAACGTGATCTCGTCGTCTTCGAGCTCCGTCGTAGGCTCTTGTGGCGGAGACGGCTC
TGGGCCCTGGTGCCGACGGCGTCTCTCGCCGGTCTGCGTGGCCGCGTTCGCCCCGGCACCACTGCGCGACGGCCACATGA
TACTCGCCGATGTCGAAGGAGCTCCAGTTCATCCTCTTCTCGTTCCCGGCCTAGTAGCTAGAGGTGGAGGAGGACAAGGA
TGAGTCAGTGGAGGCGTCGCGCGGGGAGGAGGCGGAGCCCTGGAGCGCGTACTCGACGATGCTGACTGGCACCACCTGAA
GCGAGACGAAACAAAGGAGAGCAGAGCGGGTACGCGGTCTGGGTCAAAACCACTCAAAATCAAGTTCAAAACCACTTTAG
GGGGGAATTGGTCCGGTTTTAGAGATATGAGGGGCTGATTGATCCGGTATTAAAGTTGAGGGGGGAATTGATCCATCAGA
GAAGATTTCGGGGGGAAAACGATACTTTCCTCCATAGATTTCTTTCTTAATCCTGAA------GGCAGGCAGCCCAAACA
CGAACAGGTCGCAGACCCCCCCAACCCAACCCAAAAATCCCCCAAAATCGTCCGAACCCAAACCGAAATCCCCACGCCGG
TACGCCTTCCTCCTCCTCCCTCTCCTCGCCGCCCTCATCAATCCCGAACGAGGCTAGGGTTTCCGCCCGCCGCACCGCCA
TGGGCTCCAGCAAAGGCTCGCCCCCGCCCTCCGCCGCGGGGCCCTCGTCGGCCGGGAATGCCCCCGCGCCGGTGGGGCCG
GCGCCTAGGCCGCCGGAGGTGGCGCCGTTCCTCACCAAGGTCTACGACATGGTCTCGGACGCGGCCACCGACAAGGTCAT
GTCGTGGACGGACGCCGGCAACAGCTTCGTGATCTGGGACGCGCACGCCTTCGAGCGCGACCTGCTCAGCCGCCACTTCA
AGCACCGCAACTTCAGCAGCTTCATACGCCAGCTCAACACCTATGTGAGACTCCCTCGCCCTCCCCGTTTGTCTCCTATG
CGCGGATTTTTCCTTTTCAGGGTGA-----TTTGAGGTGAATTGGATGCAATTGCTATGGCGGAGCAT--GTTTCCTTTA
TTATAATTTCGTAATGTGCTATTGCGACTATGTGAGAATTTAGTCCAAGTTAACTGTCTGGAGTAGCTCTCGGTGTAGCT
TAGACAAACCTGTGTTTTAATGCGCGATCATTTTCGCTTGAATCCAGTTTGTTACAGGCTATTGCTTTGTTCAATTTGTG
CTTGTTGCGCTGAGAACTTGTGGCAATACAATTTCACTTTCGGGTAATATGCGGACTTACCATTCCGGGTTAAAGCATTT
GTTCCAAATCTGTCCATGCTTTGGTATCCAGTAGTAAAAATGCTTTTAGCAGTCTTCTTTATAT-TATGAAATATAATTA
TGCGTGTGGCCATTGGAATTTTGTGGATCTGATCAAAATAACTATCGCTCCTAGCAGTTCTGCCGAACATGCCTTGAGTT
CTATTGGCACGGAATGCATGCTATCTAAACTCTTTTCTATATTTTGGATTCTGCATATTTGGCATCTACCAAACTTTATT
TATGGTAGGAGTAGAAGAGAATGGAGCTACTTCATGTAGTGTCTTCGCTTCATGCTTAACTTAAATAGTATCCTGACTGT
TGTGTTTCTGAATGAAATCAAATAAATGTTTCGTCTGCATTGACATAATATCATGACTGAAAGTTAATCTTCTGCGTGAG
CATTTCTTTTATGCTGGTTGGAACTTTGTTTTACCTACCCAAATGTATTTGATGAATGATGTTGTGCTTTTGATGAGTGT
CTAGCAGTATCCAGTGGCTCGAGCCAGATTCTTGCAGTCTGGGATTCTATTCTTATCAGCTTTTCCTTCCAATTTTTATA
CTGTTTCTTTCATGTCCATTTGCTGAATACAAGAGCAGACTGATTTTTTCTCACTGGATTGTATACATGCTCTTAAAGAT
TTTGTTGTGACCACACGAATTGCTGCTCTTGGCTCCATATACTTTTGGTAAAACTTCCTCATGAAGCATGCAACTTTCAA
CACTGCAATGAAATCAGTGGAAGCATCACATGATCTGTTATTTACTCTAAAGAAAACCTTGCA-----------------
---------------------------------------T----------------------------------------
-------------------TCTAAGATTTCTTATTTGGTGAACTTATCCATGCTTCTTC--TTATCTAGGGATTTCGTAA
AGTTGACCCTGATAGATGGGAGTGGGCCAATGAAGGGTTTCTTAGGGGCCAAAAGCATCTTCTGAAAATCATTAAGAGAA
AGAAGAGACCTCAGGAAGCAGGTCGTGAGTTAGAGAAGGCACCTGTCAAAGCTGCACCTGGTACTGAAAATATTGAAATA
GGAAGATATGGCGGGCTTGTAAAGGAGGTGGAAACCCTTAAGAGGGATAAATCTCTTCTCATGCAGCAGCTTGTGGATCT
CAGGCACTACCAGCAAAGCTCTAACCTTGAAGTCCAGAGTTTGATTCAACGCCTTCAAGTAATGGAACAGAACCAGAAGC
AGATGATGGCACTTCTATCAATCGTTGTCCAGAACCCTAGTCTTCTCAACCAGCTTGTGCAGCAGCAGCAGCAGCAGCGC
AGGGCCAACTGG---TATGAGGATGGAAACAAGAAAAGGAGGTTCCCTGCTCTAGAGCAGGGTCCAGTAACTGATTACGG
GACTTCTGGCGCAGGGACCGAAATTATTCAGTATCGGCCTCCTGCCCCTGAAACTTCTAGCCCAGTAATACCAGATGAAG
CATTTTTGTCGGCCACCACACAACCAATCTCAAGTCCCGCACTTAACATGCCCATGGACATTGACACTCAAACGACGTCG
GACAACCTCAACACACAAGGTTCATCAGGGGACATTTTTGCTGACATGCCTGCTCTACCAGACTTTGATGACATGCATCT
GTGGTTTGGCGAAGACGGGGAACCTACTTTAACTATTCAAGATTATGATGAGTCTCCACAGTCAGAGCAGGACTGTCAGA
TGGAAGCACAGCATAACTACAATAACCCTCAACATGGTATTCCCTAGTTTGTTGTATGCTGAATGTTTCTGTTCTTCTTT
TTCTGCAAAGCATGCAGAGACTGTATTCTGTGTAACTGCTAATATTGTATGTCCAATGACACGCTATGCACTTCAGGTGC
CCAAGTGGAGTTCAGATTAGTAGGATTTTGCGAAGTTTATACCATGTCATTTCCTTCTTT---TGTCAAGGAAATGGATT
TTTTAACGCCTGCTTATTA-------------------------------------------------------------
---------------------------------------------------------TGTTATGGTGTTCTGCTACTATC
TCAGCGATTCTATACAAATCTGACTCACTTTCTTATTTCAGCTGATGTCATAACTGAAGCATAGGTGGTGGTCTACGAGC
ACATCGGGCAGCAACATTACTTTAGGTTCAGAACGGTCCATAAAAAGATCACCATTATGTTTTCTTTACTGAAAGTTACT
TTGTACCCCCTTAGAGATTTCAATACGGACTACATACGGATGTATGTAGACGCATTTTAGAGTGTAGAGTTACTCATTTT
CCTCCGTATATAGTCTACATTGGAATCTCTATAAAATGGCTTATATTTAGGAACGGAGGGAGTATTTGCTGAACAGGACA
AAACGCAGCAGTGTAGTTTAGCAGTTACTAATGTCATCAGAATATAGTCATGTTCAATTTGATG-------CCAACAAGC
ACAAAACAGGATGCATGCAGGAAAAAGAAGGCAGCAT------------------------------TATTTAGATG---
------------------------------------------------TTTTACCCAAGCATACTCGCCTGATATTCAAA
CAACCTATTGGCGATAGCACTTTAACATGATTCTTTTGCGATAGTATTAGGTTGCTGCTGCCCTTTCAGAATTTAGAGTT
AGTCTTATTGGCCTTCACAT------------------ACATATTTGTAACCTTGTTTTTGAAAACCCGCTTGGTTGTAC
TCTAGTACACTTATTTTGGGATGAAGGGGGTAGGTTCAGTTTGATGCTGACTAATTTTACAAAGATTAGTCGGAAGCAAT
CAGTTTTGTTGTAGGGCTTGACAA-ATGTTA-CCTACTAATTCAGTTGCCTTTTGTTCAGCTTCTGGGTGATCAAAATGT
GGAGGCATGATGATGCGTGAGGTGGGCGCCATTGGCAGTGAAAACGGCATCTGTGCTCAGAGTCATCAGAGTGTCATATA
GCAAATGCTCGAAAGACATTAACTGTCGTTGACTACACAGGATTCTTTTGTTGTTTTT-CGGGCATAGGACAGGGACTTT
TTGCGCGACCCTACTCTCCTTGTCCTTACAGTAGAACAGCCAACAAC-TGAAATTCACTCGCTCGGTGTATATGCTGTTG
TGTTTTGTAAATGTCAACCTGTCCTGTACATTCTGTGAATTTCCAGCGAAAATGTAATATTCCATTGACATTTATGAAGT
GGTTTTCTATTACGTGTTGCATTTTATGTACGTGCAGGGTGCATGAACGGGAGGCT-ATTGCAAGAACCATGCACATGCA
CACCTCGTTTTTGCTCCCGGACATCC---ATTGCATACACACTGCGAGCATTGTC----------
>chr4D_334
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-------------TCCAGTCCAAGTCCAACGACAGCAATGACGTCGATGCCTGGCCCCTGCATGACCGCGACA--CTCGT
ACTCGCCATCTGGCCCATCGTTCCAGGGCCACATATCAGTCTCTCCGTGTGGATTCTTCCTTCGTCTTTTTCTTTGCGAG
GTTCTTCGAATGCAGCGCTGCTTCCCAGCTCCCACCGGCCCTGC----------CCATGCCATCGAGCGGGACGCGACGC
AACCACGCTGGCTCTTGCGCCCCACAGAAAAAAG-CGCAAAATGTGAAAAACGCTCGCCGTACAGGAAATCGCCGTGCA-
-------TAACCCTCACACACCGACACGTGGGCCCCGACGCCTTCAGGCCCACAAGTCATCGTCGAATAAAAACACGGGA
GCGCAGCTGTAAAACGAATACAGTACAGTATTCCAAAGCAA-TTTCCGGGCACGCGCCTTGCGTGATCTGACGCACGCAC
AAATATCGCCGACCCTACCACATTTTTTTTTTTCCGTTTTGAACT-----------------------------------
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------------------------------TCCATAGATTTCTTTCTTAATCCTGAA------GGCAGGCAGCCCAAACA
CGAACAAGTCGAAGACCCC-----CCCAACCCAAAAATCCCCCAAAATCATCCGAACCCAAACTGAAATCCCCACACCGA
TACGCCTTCCTCCTCCCGT-----CTCGCCGCCCTCATCAATCCCGAACGAGGCTAGGGTTTCCGCCCGCCGCACCGCCA
TGGGCTCCAGCAAAGGCTCGCCCCCGCCCTCCGCCGCGGGCCCCTCGTCGGCCGGGAATGCCCCCGCGCCGGTGGGGCCG
GTGCCGAGGCCGCCGGAGGTGGCGCCGTTCCTCACCAAGGTCTACGACATGGTCTCGGACGCGGCGACCGACAAGGTCAT
GTCGTGGACCGACGCAGGCAACAGCTTCGTGATCTGGGACGCGCACGCCTTCGAGCGCGACCTGCTCAGCCGCCACTTCA
AGCACCGCAACTTCAGCAGCTTCATACGCCAGCTCAACACCTATGTGAGACTCCCTCGCCCTCCTCGCTTGTTTCCGGTG
CGAGCCGTGTTTTTTTTTTTGCGG-GTGATTTTGAGTTGAATTGGATGCAATTGCAATCGCGGAGCATC--TTTCCTTTA
TTATAATTTCGTAATGTGCTATTGCGGGTAATTGAGAATTTAGTCCAAGTTAACTGTCTGGAGTAGCTCTCGGTGCAGCT
TAGACAAACCTGTGTTTTAATGCGTTATCATTTTCGCTTGAATCCAGTTTGTTACAGGCTGTTGCTTTGTTCAATTTGTG
CTTGTTGCGCTGACAACTTGTGGCAATACATTTTCAA-TTCGGGTAATATGCGGACTTACCATTCCGGATTAAAGCATTT
GTTCCAAATCTGTCCATGCTTTGGTATCCAGTAATAAAAATGCTTTTAGCAGTCTTCTTTATATATATGAAATATAATTG
TGCGTGTGGCCAATGGAATTTTGTGGATCTGATCAAAATAACTATCGCTCGTAGCAGTTCTGCTGAATCTGCCTCGAGTT
CTATTGGCACGGAATGCATGCTATCGAAACTCTTTCCTATATTTTGGATTCTGCATATTTGGCATATACCAAACTTTACT
TATGGTATGAGTATAAGAGAATGAAGCTACTTAATGTGGTGTCTTCGCTTCATGCTTAACTT-AATAGTATCCTGACTGT
TGTGTTTCTGAATGAAATCAAATAAATGTTTCGTCTGCATTGACATAATATCATGACTGACAGTTAATCTTCTGTGTGAG
CATTTCTTTTATGCTGGTTGGAACTTTGTTTTACCTACCCAAAGGTATTTGATGAATGATGCTGTGCTTTTGATGAGTGT
CTATCAGTATCCAGTGTCTCAAGCCAGATTCTTGCAGTCAGGGATTCAATACTTGTCAGCTTCTCCTTCCAATTTTTATA
CTGTTTCTTTCATGTCCATTTGCTGAATACAAGAGCAGACTGATTTTTTCTCGCTGGATTGTATACATGCTCTTAAAGAT
TTTGTTGTGACCACATGAATTGCTGCTCTTGGCTCCATATACTTTTGGTAAAACTTCCTCATGAAGCATGTAACTTTCAA
CACTGCAATGAAATCAGTGGTAGCAT--CATGATCTGTTATTTACTCTAGAGAAAACCTTGCA-----------------
---------------------------------------TAAATTGCGCTGTTTTTTTTTTGGATGCTCTCTATGTTCTC
TATCTTCAGTTTTAAGCATTCTAAGATATCTTATTTGGTGAACTTATCCATGCTTCTTCTTTTATCTAGGGATTTCGTAA
AGTTGACCCTGATAGATGGGAGTGGGCCAATGAGGGGTTTCTTAGGGACCAAAAGCATCTTCTGAAAATCATTAAGAGAA
AGAAGAGACCTCAGGAAGCAGGTCGTGAGTTGGAGAAGGCACCTGTCAAAGCTGCACCTGGTACTGAAAATATTGAAATA
GGAAGATATGGCGGGCTTGTAAAGGAGGTGGAAACCCTTAAGAGGGATAAAGCTCTTCTCATGAAGCAGCTCGTGGATCT
CAGGCTCTACCAGCAAAGCTCTAACCTTGAAGTCCAGAGTTTGATTCAGCGCCTTCAAGTAATGGAACAGAACCAGAAGC
AGATGATGGCACTTCTAGCAATCGTTGTCCAGAACCCTAGTCTTCTCAACCAGCTTGTGCAGCAGCAGCAGCAGCAGCGC
AGGAATAACTGCGTTTATGAGGATGGAAACAAGAAAAGGAGGTTCCCTGCTCTAGAGCAGGGTCCAGTAACTGATCATGA
GACTTCTGGCTCAGGGGCCGAAATTATTCAGTATCGGCCTCCTGTCCCTGAAACTTCTAGCCAAGTAATAGCAGATGAAG
CATTTTTGTCGGCCACCGCACAACCAATCTCTAGTGCTGCACTTAACATGCCCATGGACATCGACACTCAAACGACCTTG
GGCAACCTCAACACACAAGGTTCATCTGGGGACATTTTTGCTGACATGCCTGCTCTACCAGACTTTGAAGACATGCATCT
GTGGTTTAGCGAAGACGGGGAACCTACTTTAACTATTCAAGATTATGATGAATTTCCCCAATCAGGGCAGGACTGTCAGA
TGGAAGCACAGCATAACTACAATAACCCTCAACATGGTATTCCCTAGTTTGATGTACGCCAAATGTTTC---TGTTCTTT
TTCTGCAAAACATGCAG--ACTGTATTCTATGTAGCTGCCAATTTTGTATGTCCAGTAACACACTATGCACTTCATGTGC
ACAAGTGGAGTTAAGATTAGTAGGATCTTGCAAAGTTTATACCATGCTATCTCCTTCCTTAAATGTCTGGGAAATGGATT
T---------------------CCCTCCGTCCGTTTGC------------------------------------------
----------------------------------------------------TATGTTGTTATGGTGTTCTGTTGCTATC
TTAGTGATTCTATACAAATCTGACTCATTTTCTTATTTCAGCTGATGCCATAACTGAAGCATAGGTGGTGGTCTAGGAGC
ACATTGGGCAGCAACAT-----TAGGTTCGCAAGGGTCCGTAAAAGAT---CCATTATGTTCTATTTACTGAAAGTTACT
TCGTA---------------------------------------------------------------------------
----------------------------------------------------------------TTTGCTAAGCCAAACG
AAATGCAGCTGTGCACTTTAGCAGTCACTAATGTCATCAAAATATAATCATG--CAATTTGATATTCTTCACCAACAAGG
ACAAAAGAGGATGCATGCAGAAAAAAAAAACCCGGGGAGCATTTAGATGTCTAACTAGGTATTCAAATATTTAGATG---
------------------------------------------------TGT-----------------------------
------------GATAGAACTTTAACATGATTCTGTTGCATCGGTATTAGGT---TGCTGCCCTTTCAGAATTCAGAGTT
AGTACTTCATGCTGCATCTCTTAGTCAAACCGGACTTCACATATTTGTAACCTTGTTTTCGAAGATCTGCTTGGTTGATA
TGAATGTTATTTTGTTCTAGTAGGAGC---TAGGTTCAGTTCGATGGTGACTAATTTTACAAAGATCAGTTGGAAGGAAT
CA-TTTTGCTGTAGGGCTTGACGA-TTGTTCTCCTACTGACTCAGTTGCCTTTCCTTCAGCTTCCGGGTGATCAAAGTAT
GGAGGCATGGTGATGCGTGAGGTGCGCGCCATTGGCAGTGAAAGCAGGAGTTGTGCTCAGAGTGTCGTATAC-TCGTATG
GC-AATGCTCGAAAGACATTAACTGTCGTTGACTATACAGGATTCTTTTGTTGTTTTTTCGGGCACAGGACAGGGA-TTT
TTGCGCTACCCTACTCTCCTTGTCCTCACAGTAGAATAGCCAACAAC-TGAAGTTCACTCGCTCGGTGTATATGCTGTTG
TGTTTTGTAAATGTCAACCTGTTCTGTACATTCTGTGAACTTCCAGCGAAAATGTAATGTTCCATTGACATTTATTAAGC
GGTTTTCTAGTACGCGTTGCGTCTTATCTACGTGCAGGGTACATAGACGGGAAGCT-ATGGCGAGAACCATGCACACGCA
CACC-CGTTTTTGCTCCCGGACATGAACAATTCCTT--ACACTGTGAGCATTGTC----------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
---------------------------S----------------S-S-------------S------------SS-----
-----------------------------------------------------------S----------------S---
-----------------------------S--------------------------------------------------
---------------------------------S-------------------------------S----S---------
---------------------------S----S-----------------------------------------------
---------------S--S-S--S-S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------SSSSSS-----------------
-------------------S------------------S-----------------------------------------
-------------------------------------------S-------S--------------S-S-----------
---------------------------------S---S-----------S--------------------------S---
-----------------------------------------S-----------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S------SS----------S----------
-------S------------S-S-S-------------------------------------------SS----------
----------------------------------S------------------S--------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
------------------------S-------S-----------------------------------------------
-------------S--S---------------------------------------------------------------
-------S----------------------------------------------------------------S-------
--------------------------------------------S-----------------------------------
--------------S-----------------------------------------------------------------
-------------------S--------------------S---------------------------------------
--------------------------------------------------------------------------------
----------------------------S----S-----------------------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------
----------------------------------------------------------S---------------------
------------------------------S--------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
-----------------------S------------------S-------------------------S-----------
---------S-S---------------S-----------------S----------------------------------
------------------------------------------------S---------SSSS--------------S---
--S-SS-SSSSSS--SSSSSSS-----------SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S---------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-----S----------------------S-----------------------------------S----SSS--------
-------------------------------SSS------------------S-----S----------S-------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------
------------------------S---------------------------------SSSS-S-SSS-SSSS-------
--------------------------------------------------------------------S-----------
--------------S---------S-----------------------S-----------------S----S-S------
-------------------SSSSSS-----------------------------S-------------------------
-S------------------------------------S-------S----------------SS---------------
--------------S--------S---------S----------------------------------------------
--------------------S------S--------------S----S--------------------------------
----S--------------------------------------------------------------------S------
---------------S--------------S-SS----------------------S---------------------S-
----------------------------S--------SS------S---------SSSSSSSSSS
>forward_367
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GACGACAGCAATGACGTTGG---------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_2614
--------------------------------------------------------------------------------
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-----------------------------------------------------ATGTCTGGAGTAGCTCTCGGT------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_2149
--------------------------------------------------------------------------------
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-------------------------------------------------GAAGCTAGGGTTTCCGCTCC-----------
--------------------------------------------------------------------------------
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>reverse_3800
--------------------------------------------------------------------------------
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---------------------------------------CCTTAGGGGCCAAAAGCATC---------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_3791
--------------------------------------------------------------------------------
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-----------ATAGATGGGAGTGGGCCAAC-------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_5586
--------------------------------------------------------------------------------
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-----------------------------------------------------------------GTTGCTGCCCTTCTT
GGTTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
