Multiple sequence alignment - TraesCS4B01G219100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G219100 chr4B 100.000 3682 0 0 1 3682 461197431 461193750 0.000000e+00 6800.0
1 TraesCS4B01G219100 chr4B 79.336 271 29 8 2578 2823 636796980 636797248 8.180000e-37 165.0
2 TraesCS4B01G219100 chr4A 90.658 1702 129 18 754 2442 89895933 89897617 0.000000e+00 2235.0
3 TraesCS4B01G219100 chr4A 84.314 612 49 26 2459 3043 89897673 89898264 4.150000e-154 555.0
4 TraesCS4B01G219100 chr4A 86.150 361 39 7 3045 3395 89898301 89898660 2.680000e-101 379.0
5 TraesCS4B01G219100 chr4A 91.860 172 14 0 871 1042 89680934 89681105 1.320000e-59 241.0
6 TraesCS4B01G219100 chr4D 94.212 1002 51 4 754 1753 374614786 374613790 0.000000e+00 1522.0
7 TraesCS4B01G219100 chr4D 87.520 641 54 14 1806 2443 374613791 374613174 0.000000e+00 717.0
8 TraesCS4B01G219100 chr4D 82.119 906 78 28 2461 3323 374613100 374612236 0.000000e+00 699.0
9 TraesCS4B01G219100 chr4D 86.628 172 18 3 754 924 374773032 374772865 6.280000e-43 185.0
10 TraesCS4B01G219100 chr4D 94.215 121 7 0 922 1042 374783786 374783666 6.280000e-43 185.0
11 TraesCS4B01G219100 chr4D 93.443 122 7 1 922 1042 374772373 374772252 2.920000e-41 180.0
12 TraesCS4B01G219100 chr4D 94.545 55 3 0 870 924 374784934 374784880 6.550000e-13 86.1
13 TraesCS4B01G219100 chr7B 98.613 649 7 1 67 713 553185953 553186601 0.000000e+00 1147.0
14 TraesCS4B01G219100 chr1B 90.301 299 26 3 464 760 648450217 648450514 4.460000e-104 388.0
15 TraesCS4B01G219100 chr1B 85.405 370 35 9 38 399 648449714 648450072 2.090000e-97 366.0
16 TraesCS4B01G219100 chr1B 87.023 131 15 2 2693 2823 532398508 532398380 2.960000e-31 147.0
17 TraesCS4B01G219100 chr5A 92.547 161 12 0 35 195 573954631 573954471 7.950000e-57 231.0
18 TraesCS4B01G219100 chr5A 90.184 163 16 0 33 195 649316249 649316087 2.880000e-51 213.0
19 TraesCS4B01G219100 chr5A 89.412 170 13 5 26 192 26157961 26158128 3.730000e-50 209.0
20 TraesCS4B01G219100 chr5D 90.588 170 14 2 27 195 455830726 455830558 1.330000e-54 224.0
21 TraesCS4B01G219100 chr2A 93.919 148 9 0 43 190 767010602 767010455 1.330000e-54 224.0
22 TraesCS4B01G219100 chr2A 78.967 271 30 8 2578 2823 343421957 343421689 3.810000e-35 159.0
23 TraesCS4B01G219100 chr6A 90.741 162 15 0 34 195 546925892 546925731 2.230000e-52 217.0
24 TraesCS4B01G219100 chrUn 90.566 159 15 0 36 194 81662018 81661860 1.040000e-50 211.0
25 TraesCS4B01G219100 chr1A 87.912 182 14 2 42 215 5875021 5875202 1.340000e-49 207.0
26 TraesCS4B01G219100 chr7A 79.336 271 29 8 2578 2823 323739817 323739549 8.180000e-37 165.0
27 TraesCS4B01G219100 chr7A 78.967 271 30 8 2578 2823 499349313 499349045 3.810000e-35 159.0
28 TraesCS4B01G219100 chr5B 78.967 271 30 8 2578 2823 473289630 473289898 3.810000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G219100 chr4B 461193750 461197431 3681 True 6800.000000 6800 100.000000 1 3682 1 chr4B.!!$R1 3681
1 TraesCS4B01G219100 chr4A 89895933 89898660 2727 False 1056.333333 2235 87.040667 754 3395 3 chr4A.!!$F2 2641
2 TraesCS4B01G219100 chr4D 374612236 374614786 2550 True 979.333333 1522 87.950333 754 3323 3 chr4D.!!$R1 2569
3 TraesCS4B01G219100 chr7B 553185953 553186601 648 False 1147.000000 1147 98.613000 67 713 1 chr7B.!!$F1 646
4 TraesCS4B01G219100 chr1B 648449714 648450514 800 False 377.000000 388 87.853000 38 760 2 chr1B.!!$F1 722

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
65 66 0.176449 GGATGTTTGCATTGGGAGGC 59.824 55.0 0.00 0.00 35.07 4.70 F
1129 1238 0.039035 AGAGCTCGTCCTGGTTCTCT 59.961 55.0 8.37 0.00 0.00 3.10 F
1439 1548 0.108138 ATCTGCTAGTGGTTCACCGC 60.108 55.0 0.87 0.87 46.57 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1233 1342 0.313043 CTGAAACTGCAACCAGCCAG 59.687 55.0 0.00 0.00 43.02 4.85 R
2502 2685 0.032815 GCCACTTCGAGGATAGAGGC 59.967 60.0 7.41 7.41 40.14 4.70 R
3435 3692 0.038166 GCAACATCTTGGTGGGGAGA 59.962 55.0 0.00 0.00 35.13 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.954487 ACAGTAAGTTTTCTTTAGGGGTTG 57.046 37.500 0.00 0.00 40.91 3.77
24 25 6.665695 ACAGTAAGTTTTCTTTAGGGGTTGA 58.334 36.000 0.00 0.00 40.91 3.18
25 26 7.120716 ACAGTAAGTTTTCTTTAGGGGTTGAA 58.879 34.615 0.00 0.00 40.91 2.69
26 27 7.616542 ACAGTAAGTTTTCTTTAGGGGTTGAAA 59.383 33.333 0.00 0.00 40.91 2.69
27 28 8.471609 CAGTAAGTTTTCTTTAGGGGTTGAAAA 58.528 33.333 0.00 0.00 40.91 2.29
28 29 9.038072 AGTAAGTTTTCTTTAGGGGTTGAAAAA 57.962 29.630 0.00 0.00 39.21 1.94
65 66 0.176449 GGATGTTTGCATTGGGAGGC 59.824 55.000 0.00 0.00 35.07 4.70
541 649 4.424711 GGGCCGAAGTGGGATGCA 62.425 66.667 0.00 0.00 38.63 3.96
587 695 2.871096 ATACCAAGCAAAACCGAGGA 57.129 45.000 0.00 0.00 0.00 3.71
726 834 4.592179 GAATGCCAAAGTCTAATTCTCGC 58.408 43.478 0.00 0.00 0.00 5.03
735 843 4.367450 AGTCTAATTCTCGCTCTCAATGC 58.633 43.478 0.00 0.00 0.00 3.56
752 860 3.919435 AATGCCAACATCCAAACGCAGT 61.919 45.455 0.00 0.00 37.93 4.40
768 876 1.535687 AGTGTAAGTGGACGGGCCT 60.536 57.895 0.84 0.00 37.63 5.19
774 882 1.903877 AAGTGGACGGGCCTGATCTG 61.904 60.000 21.41 0.00 37.63 2.90
775 883 3.083349 TGGACGGGCCTGATCTGG 61.083 66.667 21.41 14.07 37.63 3.86
776 884 3.083997 GGACGGGCCTGATCTGGT 61.084 66.667 21.41 0.00 0.00 4.00
804 912 1.223501 TGTGGAACCTACCCCAACAA 58.776 50.000 0.00 0.00 34.36 2.83
809 917 0.481128 AACCTACCCCAACAACCCAG 59.519 55.000 0.00 0.00 0.00 4.45
810 918 1.304134 CCTACCCCAACAACCCAGC 60.304 63.158 0.00 0.00 0.00 4.85
811 919 1.304134 CTACCCCAACAACCCAGCC 60.304 63.158 0.00 0.00 0.00 4.85
812 920 2.075355 CTACCCCAACAACCCAGCCA 62.075 60.000 0.00 0.00 0.00 4.75
851 960 0.974383 TCTTCCACGTTCTCCCTTCC 59.026 55.000 0.00 0.00 0.00 3.46
872 981 1.684450 GCGACCAAAGAAAGGGGAAAA 59.316 47.619 0.00 0.00 0.00 2.29
969 1078 3.670629 CTCTCACCGCCCCTCTCCT 62.671 68.421 0.00 0.00 0.00 3.69
978 1087 1.231641 CCCCTCTCCTCGATCAGGT 59.768 63.158 9.98 0.00 43.95 4.00
981 1090 1.144093 CCCTCTCCTCGATCAGGTACT 59.856 57.143 9.98 0.00 43.95 2.73
1092 1201 2.599082 CGCTTCTAGTTCTTCGCGATTT 59.401 45.455 10.88 0.00 42.82 2.17
1129 1238 0.039035 AGAGCTCGTCCTGGTTCTCT 59.961 55.000 8.37 0.00 0.00 3.10
1213 1322 0.528466 TCTGAGCGGAATCATGCGTC 60.528 55.000 0.00 0.00 43.01 5.19
1218 1327 1.439353 GCGGAATCATGCGTCATGGT 61.439 55.000 16.31 9.22 43.01 3.55
1233 1342 4.886121 GGTGGCGGTAGCGGTAGC 62.886 72.222 17.08 13.60 46.35 3.58
1252 1361 0.313043 CTGGCTGGTTGCAGTTTCAG 59.687 55.000 0.00 0.00 45.15 3.02
1303 1412 5.876460 TCTTATTTAAGGGAGGCGTTGTTAC 59.124 40.000 0.00 0.00 34.14 2.50
1329 1438 0.323629 TGGTAGTGGTAGTTGGCTGC 59.676 55.000 0.00 0.00 0.00 5.25
1353 1462 0.250640 AGTGGTCTGCAGAAAGCTGG 60.251 55.000 20.19 0.00 45.94 4.85
1356 1465 1.339438 TGGTCTGCAGAAAGCTGGATC 60.339 52.381 20.19 1.96 41.87 3.36
1363 1472 2.421424 GCAGAAAGCTGGATCGATGTTT 59.579 45.455 0.54 0.00 42.53 2.83
1439 1548 0.108138 ATCTGCTAGTGGTTCACCGC 60.108 55.000 0.87 0.87 46.57 5.68
1451 1560 3.320541 TGGTTCACCGCAATGAGAAATTT 59.679 39.130 0.00 0.00 39.43 1.82
1454 1563 4.844998 TCACCGCAATGAGAAATTTTGA 57.155 36.364 0.00 0.00 0.00 2.69
1456 1565 4.518590 TCACCGCAATGAGAAATTTTGAGA 59.481 37.500 0.00 0.00 0.00 3.27
1458 1567 5.117592 CACCGCAATGAGAAATTTTGAGAAC 59.882 40.000 0.00 0.00 0.00 3.01
1520 1640 5.381477 GCTAATTTTGCCCATTTTGTTTCG 58.619 37.500 0.00 0.00 0.00 3.46
1522 1642 1.587547 TTTGCCCATTTTGTTTCGCC 58.412 45.000 0.00 0.00 0.00 5.54
1575 1695 2.092429 GGCCCTCAAGGAATGTGATGTA 60.092 50.000 0.00 0.00 38.24 2.29
1590 1710 9.329913 GAATGTGATGTACTGTGTTCAAAATAC 57.670 33.333 0.00 0.00 0.00 1.89
1593 1713 5.699001 TGATGTACTGTGTTCAAAATACGCT 59.301 36.000 0.00 0.00 0.00 5.07
1735 1855 6.128336 TGTTTTTGGACAAATCTTGCAAGTTG 60.128 34.615 25.19 23.27 0.00 3.16
1742 1862 6.803807 GGACAAATCTTGCAAGTTGTATCTTC 59.196 38.462 26.43 17.16 34.44 2.87
1799 1919 7.097192 AGTCTCACTCGTGCAAATAGAAAATA 58.903 34.615 0.00 0.00 0.00 1.40
1800 1920 7.766278 AGTCTCACTCGTGCAAATAGAAAATAT 59.234 33.333 0.00 0.00 0.00 1.28
1801 1921 8.058915 GTCTCACTCGTGCAAATAGAAAATATC 58.941 37.037 0.00 0.00 0.00 1.63
1828 1948 2.222027 GAAGACCCCAATATTGCTCCG 58.778 52.381 10.11 0.00 0.00 4.63
1830 1950 1.141053 AGACCCCAATATTGCTCCGTC 59.859 52.381 10.11 10.96 0.00 4.79
1831 1951 0.182775 ACCCCAATATTGCTCCGTCC 59.817 55.000 10.11 0.00 0.00 4.79
1862 1982 9.630098 AAATAGAAACATTGTGCTTGTAGATTG 57.370 29.630 0.00 0.00 0.00 2.67
1911 2031 6.653273 TTATTCGTCATTCAGCAGAAGAAG 57.347 37.500 0.00 0.00 36.11 2.85
1921 2041 8.849168 TCATTCAGCAGAAGAAGAATGTTAAAA 58.151 29.630 12.13 0.00 44.62 1.52
1957 2077 5.852827 TGTACAGACAATCAGACAATGTGA 58.147 37.500 0.00 0.00 30.68 3.58
1961 2081 7.984422 ACAGACAATCAGACAATGTGAATAA 57.016 32.000 0.00 0.00 0.00 1.40
2002 2122 5.164620 TGCCTGTGAGTTTCTCATGATTA 57.835 39.130 0.00 0.00 42.73 1.75
2042 2162 8.189460 ACTACGTAGACACTAGATTTTTCCATC 58.811 37.037 28.74 0.00 0.00 3.51
2057 2177 7.747155 TTTTTCCATCACCGACAAAAGTATA 57.253 32.000 0.00 0.00 0.00 1.47
2067 2188 9.362539 TCACCGACAAAAGTATATCTCTTTTAC 57.637 33.333 14.16 11.53 41.30 2.01
2097 2218 3.958147 TCCTTCATATGGCGTAGTTCTGA 59.042 43.478 2.13 0.00 0.00 3.27
2098 2219 4.051922 CCTTCATATGGCGTAGTTCTGAC 58.948 47.826 2.13 0.00 0.00 3.51
2177 2299 2.878406 TGTCTTTGAAAGTAGCACCAGC 59.122 45.455 4.68 0.00 42.56 4.85
2207 2329 8.650143 TTTGGAATTTTATAGAGCCAAGTTCT 57.350 30.769 0.00 0.00 36.82 3.01
2234 2356 9.158233 CTGTAGGTTTTGATTTATAGTCCGAAA 57.842 33.333 0.00 0.00 0.00 3.46
2249 2371 1.089920 CGAAATTCTGACCCTGCCAG 58.910 55.000 0.00 0.00 0.00 4.85
2269 2391 0.310854 GAACTTGTGCCGGTTCTTGG 59.689 55.000 1.90 0.00 38.82 3.61
2273 2395 1.990160 TTGTGCCGGTTCTTGGGAGT 61.990 55.000 1.90 0.00 0.00 3.85
2276 2398 3.157680 CCGGTTCTTGGGAGTGGT 58.842 61.111 0.00 0.00 0.00 4.16
2312 2434 6.016276 AGTGTAAAACCATTGGACAAGATCAC 60.016 38.462 10.37 9.26 0.00 3.06
2388 2511 5.921976 GTGCTGAAACATGTTTGATGATCAA 59.078 36.000 27.85 3.29 34.03 2.57
2404 2527 5.092554 TGATCAATGCATTTGCCTGAATT 57.907 34.783 9.83 0.00 41.18 2.17
2415 2538 5.596836 TTTGCCTGAATTTTGAGAAGTGT 57.403 34.783 0.00 0.00 0.00 3.55
2446 2569 6.483307 TGCTATTAGTTCTGACCACATTATGC 59.517 38.462 0.00 0.00 0.00 3.14
2449 2572 3.614092 AGTTCTGACCACATTATGCCTG 58.386 45.455 0.00 0.00 0.00 4.85
2450 2573 3.264193 AGTTCTGACCACATTATGCCTGA 59.736 43.478 0.00 0.00 0.00 3.86
2451 2574 3.998913 TCTGACCACATTATGCCTGAA 57.001 42.857 0.00 0.00 0.00 3.02
2455 2578 4.858850 TGACCACATTATGCCTGAATCTT 58.141 39.130 0.00 0.00 0.00 2.40
2456 2579 4.641541 TGACCACATTATGCCTGAATCTTG 59.358 41.667 0.00 0.00 0.00 3.02
2457 2580 4.858850 ACCACATTATGCCTGAATCTTGA 58.141 39.130 0.00 0.00 0.00 3.02
2472 2651 5.048782 TGAATCTTGAGAATTTGGTTCCACG 60.049 40.000 0.00 0.00 37.56 4.94
2486 2665 1.164411 TCCACGTGATTGGAATGTGC 58.836 50.000 19.30 0.00 43.04 4.57
2491 2670 3.188254 CACGTGATTGGAATGTGCTTACA 59.812 43.478 10.90 0.00 0.00 2.41
2502 2685 8.586570 TGGAATGTGCTTACAATTACTTTTTG 57.413 30.769 0.00 0.00 0.00 2.44
2503 2686 7.170658 TGGAATGTGCTTACAATTACTTTTTGC 59.829 33.333 0.00 0.00 0.00 3.68
2513 2696 7.631717 ACAATTACTTTTTGCCTCTATCCTC 57.368 36.000 0.00 0.00 0.00 3.71
2538 2721 3.317608 GCATGTTGCATTGTCCGAG 57.682 52.632 0.00 0.00 44.26 4.63
2539 2722 0.523072 GCATGTTGCATTGTCCGAGT 59.477 50.000 0.00 0.00 44.26 4.18
2540 2723 1.737236 GCATGTTGCATTGTCCGAGTA 59.263 47.619 0.00 0.00 44.26 2.59
2541 2724 2.223112 GCATGTTGCATTGTCCGAGTAG 60.223 50.000 0.00 0.00 44.26 2.57
2547 2730 5.109903 GTTGCATTGTCCGAGTAGACTAAT 58.890 41.667 0.00 0.00 37.66 1.73
2557 2740 5.047306 TCCGAGTAGACTAATATTGGCATGG 60.047 44.000 0.00 0.00 0.00 3.66
2562 2745 5.252586 AGACTAATATTGGCATGGCAGAT 57.747 39.130 22.17 18.91 0.00 2.90
2568 2751 1.216064 TTGGCATGGCAGATACCTCT 58.784 50.000 22.17 0.00 0.00 3.69
2582 2766 7.446625 GGCAGATACCTCTTTCATGTAATTCAT 59.553 37.037 0.00 0.00 37.22 2.57
2650 2834 5.312079 AGATATGAAGAAGGCTTACATGGC 58.688 41.667 17.95 12.12 33.61 4.40
2719 2927 3.338249 CCTGTATGTACACTGCTGCTTT 58.662 45.455 0.00 0.00 31.93 3.51
2842 3050 7.238305 TGGTATGATCTCAAGGAATCCATGTAT 59.762 37.037 0.61 0.00 0.00 2.29
2867 3076 9.762933 ATTATTTTATTGACTTGCAAGTTGTGT 57.237 25.926 31.58 19.68 40.42 3.72
2893 3102 8.884323 TCTGATAGCATTATCCTCCAATAACTT 58.116 33.333 0.00 0.00 35.76 2.66
2903 3112 6.121776 TCCTCCAATAACTTGTTTAGCTGA 57.878 37.500 0.00 0.00 0.00 4.26
2920 3129 3.129287 AGCTGACCAAAGTGTTCAGTTTG 59.871 43.478 19.93 19.93 34.09 2.93
2928 3137 0.954452 GTGTTCAGTTTGGCCTCCAG 59.046 55.000 3.32 0.00 33.81 3.86
2965 3174 9.214957 AGTACTGAATCATTCACGAAAAATACA 57.785 29.630 0.00 0.00 35.46 2.29
3006 3216 6.635030 AAAACTGGCGACTTCTCTATTTTT 57.365 33.333 0.00 0.00 0.00 1.94
3045 3257 2.497273 ACATAATGCCAGAAAGTTGCCC 59.503 45.455 0.00 0.00 0.00 5.36
3048 3260 0.971386 ATGCCAGAAAGTTGCCCTTG 59.029 50.000 0.00 0.00 32.32 3.61
3108 3357 3.672241 GCACTCGGTTGTTCAGTGTTTTT 60.672 43.478 0.00 0.00 39.86 1.94
3110 3359 3.128068 ACTCGGTTGTTCAGTGTTTTTCC 59.872 43.478 0.00 0.00 0.00 3.13
3112 3361 3.759618 TCGGTTGTTCAGTGTTTTTCCTT 59.240 39.130 0.00 0.00 0.00 3.36
3113 3362 4.102649 CGGTTGTTCAGTGTTTTTCCTTC 58.897 43.478 0.00 0.00 0.00 3.46
3127 3376 8.435430 GTGTTTTTCCTTCTCTTTTTGACAAAG 58.565 33.333 0.10 0.00 0.00 2.77
3131 3381 4.339247 TCCTTCTCTTTTTGACAAAGCTGG 59.661 41.667 0.10 0.00 0.00 4.85
3160 3411 8.152309 TCTTTTGAATGTTTAGCCAAAAATGG 57.848 30.769 0.00 0.00 37.83 3.16
3185 3436 6.622245 GCCCTAGTCCGAAACTTTAATCAAAC 60.622 42.308 0.00 0.00 39.55 2.93
3217 3468 1.351017 ACTCAACGTGACCCATTCCAT 59.649 47.619 0.00 0.00 0.00 3.41
3234 3485 2.158957 TCCATCGCTAAACTTGGCTAGG 60.159 50.000 0.20 0.00 31.89 3.02
3257 3508 2.573941 GCAACAGGCATCTTGATTCC 57.426 50.000 0.00 0.00 43.97 3.01
3273 3524 0.948678 TTCCGAGAAAAACTTGGCGG 59.051 50.000 0.00 0.00 46.93 6.13
3303 3559 5.410355 AACAATGATGATTTGGGGTCAAG 57.590 39.130 0.00 0.00 33.98 3.02
3325 3581 0.689623 CAAGGACCTTGGAGCTGACT 59.310 55.000 24.42 0.00 37.77 3.41
3339 3595 6.957631 TGGAGCTGACTTATTTTCCATTCTA 58.042 36.000 0.00 0.00 30.21 2.10
3352 3608 4.142609 TCCATTCTAGGCAGTAGCTTTG 57.857 45.455 0.00 0.00 41.70 2.77
3364 3620 0.036010 TAGCTTTGGTGCTGAGCTCC 60.036 55.000 18.05 18.05 44.99 4.70
3368 3625 0.106268 TTTGGTGCTGAGCTCCCAAA 60.106 50.000 26.63 26.63 42.80 3.28
3379 3636 1.569479 GCTCCCAAACTGAGCGTCAC 61.569 60.000 0.00 0.00 45.05 3.67
3383 3640 0.861837 CCAAACTGAGCGTCACAGTC 59.138 55.000 9.48 0.00 46.01 3.51
3386 3643 1.032794 AACTGAGCGTCACAGTCAGA 58.967 50.000 9.87 0.00 46.01 3.27
3391 3648 0.390860 AGCGTCACAGTCAGAAGCTT 59.609 50.000 0.00 0.00 46.15 3.74
3395 3652 3.062763 CGTCACAGTCAGAAGCTTTGAT 58.937 45.455 0.00 0.00 0.00 2.57
3396 3653 3.122613 CGTCACAGTCAGAAGCTTTGATC 59.877 47.826 0.00 2.62 0.00 2.92
3397 3654 3.434984 GTCACAGTCAGAAGCTTTGATCC 59.565 47.826 0.00 0.00 0.00 3.36
3398 3655 3.326006 TCACAGTCAGAAGCTTTGATCCT 59.674 43.478 0.00 0.00 0.00 3.24
3399 3656 3.683822 CACAGTCAGAAGCTTTGATCCTC 59.316 47.826 0.00 0.00 0.00 3.71
3400 3657 2.928757 CAGTCAGAAGCTTTGATCCTCG 59.071 50.000 0.00 0.00 0.00 4.63
3401 3658 2.828520 AGTCAGAAGCTTTGATCCTCGA 59.171 45.455 0.00 0.00 0.00 4.04
3402 3659 3.259374 AGTCAGAAGCTTTGATCCTCGAA 59.741 43.478 0.00 0.00 0.00 3.71
3403 3660 4.081198 AGTCAGAAGCTTTGATCCTCGAAT 60.081 41.667 0.00 0.00 0.00 3.34
3404 3661 4.633565 GTCAGAAGCTTTGATCCTCGAATT 59.366 41.667 0.00 0.00 0.00 2.17
3405 3662 4.633126 TCAGAAGCTTTGATCCTCGAATTG 59.367 41.667 0.00 0.00 0.00 2.32
3406 3663 3.376546 AGAAGCTTTGATCCTCGAATTGC 59.623 43.478 0.00 0.00 0.00 3.56
3407 3664 2.996631 AGCTTTGATCCTCGAATTGCT 58.003 42.857 0.00 0.00 0.00 3.91
3408 3665 2.681848 AGCTTTGATCCTCGAATTGCTG 59.318 45.455 0.00 0.00 0.00 4.41
3409 3666 2.421424 GCTTTGATCCTCGAATTGCTGT 59.579 45.455 0.00 0.00 0.00 4.40
3410 3667 3.119708 GCTTTGATCCTCGAATTGCTGTT 60.120 43.478 0.00 0.00 0.00 3.16
3411 3668 4.616835 GCTTTGATCCTCGAATTGCTGTTT 60.617 41.667 0.00 0.00 0.00 2.83
3412 3669 4.685169 TTGATCCTCGAATTGCTGTTTC 57.315 40.909 0.00 0.00 0.00 2.78
3413 3670 3.009723 TGATCCTCGAATTGCTGTTTCC 58.990 45.455 0.00 0.00 0.00 3.13
3414 3671 2.859165 TCCTCGAATTGCTGTTTCCT 57.141 45.000 0.00 0.00 0.00 3.36
3415 3672 3.140325 TCCTCGAATTGCTGTTTCCTT 57.860 42.857 0.00 0.00 0.00 3.36
3416 3673 3.074412 TCCTCGAATTGCTGTTTCCTTC 58.926 45.455 0.00 0.00 0.00 3.46
3417 3674 2.159653 CCTCGAATTGCTGTTTCCTTCG 60.160 50.000 0.00 0.00 39.88 3.79
3418 3675 1.196808 TCGAATTGCTGTTTCCTTCGC 59.803 47.619 0.00 0.00 38.75 4.70
3419 3676 1.069296 CGAATTGCTGTTTCCTTCGCA 60.069 47.619 0.00 0.00 33.29 5.10
3420 3677 2.589014 GAATTGCTGTTTCCTTCGCAG 58.411 47.619 0.00 0.00 33.48 5.18
3421 3678 1.896220 ATTGCTGTTTCCTTCGCAGA 58.104 45.000 0.00 0.00 33.48 4.26
3422 3679 1.674359 TTGCTGTTTCCTTCGCAGAA 58.326 45.000 0.00 0.00 45.90 3.02
3423 3680 1.896220 TGCTGTTTCCTTCGCAGAAT 58.104 45.000 0.00 0.00 45.90 2.40
3424 3681 1.806542 TGCTGTTTCCTTCGCAGAATC 59.193 47.619 0.00 0.00 45.90 2.52
3425 3682 1.201965 GCTGTTTCCTTCGCAGAATCG 60.202 52.381 0.00 0.00 45.90 3.34
3426 3683 0.796312 TGTTTCCTTCGCAGAATCGC 59.204 50.000 0.00 0.00 45.90 4.58
3427 3684 0.097150 GTTTCCTTCGCAGAATCGCC 59.903 55.000 0.00 0.00 45.90 5.54
3428 3685 0.321210 TTTCCTTCGCAGAATCGCCA 60.321 50.000 0.00 0.00 45.90 5.69
3429 3686 0.321210 TTCCTTCGCAGAATCGCCAA 60.321 50.000 0.00 0.00 45.90 4.52
3430 3687 0.740868 TCCTTCGCAGAATCGCCAAG 60.741 55.000 0.00 0.00 45.90 3.61
3431 3688 1.021390 CCTTCGCAGAATCGCCAAGT 61.021 55.000 4.58 0.00 45.90 3.16
3432 3689 0.798776 CTTCGCAGAATCGCCAAGTT 59.201 50.000 0.00 0.00 45.90 2.66
3433 3690 1.197721 CTTCGCAGAATCGCCAAGTTT 59.802 47.619 0.00 0.00 45.90 2.66
3434 3691 1.234821 TCGCAGAATCGCCAAGTTTT 58.765 45.000 0.00 0.00 0.00 2.43
3435 3692 1.606668 TCGCAGAATCGCCAAGTTTTT 59.393 42.857 0.00 0.00 0.00 1.94
3436 3693 1.978782 CGCAGAATCGCCAAGTTTTTC 59.021 47.619 0.00 0.00 0.00 2.29
3437 3694 2.350772 CGCAGAATCGCCAAGTTTTTCT 60.351 45.455 0.00 0.00 0.00 2.52
3438 3695 3.237628 GCAGAATCGCCAAGTTTTTCTC 58.762 45.455 0.00 0.00 0.00 2.87
3439 3696 3.826466 CAGAATCGCCAAGTTTTTCTCC 58.174 45.455 0.00 0.00 0.00 3.71
3440 3697 2.820197 AGAATCGCCAAGTTTTTCTCCC 59.180 45.455 0.00 0.00 0.00 4.30
3441 3698 1.545841 ATCGCCAAGTTTTTCTCCCC 58.454 50.000 0.00 0.00 0.00 4.81
3442 3699 0.183971 TCGCCAAGTTTTTCTCCCCA 59.816 50.000 0.00 0.00 0.00 4.96
3443 3700 0.313987 CGCCAAGTTTTTCTCCCCAC 59.686 55.000 0.00 0.00 0.00 4.61
3444 3701 0.679505 GCCAAGTTTTTCTCCCCACC 59.320 55.000 0.00 0.00 0.00 4.61
3445 3702 2.032151 GCCAAGTTTTTCTCCCCACCA 61.032 52.381 0.00 0.00 0.00 4.17
3446 3703 2.393646 CCAAGTTTTTCTCCCCACCAA 58.606 47.619 0.00 0.00 0.00 3.67
3447 3704 2.365293 CCAAGTTTTTCTCCCCACCAAG 59.635 50.000 0.00 0.00 0.00 3.61
3448 3705 3.295973 CAAGTTTTTCTCCCCACCAAGA 58.704 45.455 0.00 0.00 0.00 3.02
3449 3706 3.897505 CAAGTTTTTCTCCCCACCAAGAT 59.102 43.478 0.00 0.00 0.00 2.40
3450 3707 3.500343 AGTTTTTCTCCCCACCAAGATG 58.500 45.455 0.00 0.00 0.00 2.90
3451 3708 3.117131 AGTTTTTCTCCCCACCAAGATGT 60.117 43.478 0.00 0.00 0.00 3.06
3452 3709 3.611025 TTTTCTCCCCACCAAGATGTT 57.389 42.857 0.00 0.00 0.00 2.71
3453 3710 2.584835 TTCTCCCCACCAAGATGTTG 57.415 50.000 0.00 0.00 0.00 3.33
3454 3711 0.038166 TCTCCCCACCAAGATGTTGC 59.962 55.000 0.00 0.00 31.64 4.17
3455 3712 0.038744 CTCCCCACCAAGATGTTGCT 59.961 55.000 0.00 0.00 31.64 3.91
3456 3713 0.038166 TCCCCACCAAGATGTTGCTC 59.962 55.000 0.00 0.00 31.64 4.26
3457 3714 1.308069 CCCCACCAAGATGTTGCTCG 61.308 60.000 0.00 0.00 31.64 5.03
3458 3715 1.308069 CCCACCAAGATGTTGCTCGG 61.308 60.000 0.00 0.00 31.64 4.63
3459 3716 0.606401 CCACCAAGATGTTGCTCGGT 60.606 55.000 0.00 0.00 31.64 4.69
3460 3717 0.518636 CACCAAGATGTTGCTCGGTG 59.481 55.000 0.00 0.00 31.64 4.94
3461 3718 1.237285 ACCAAGATGTTGCTCGGTGC 61.237 55.000 0.00 0.00 43.25 5.01
3462 3719 0.957395 CCAAGATGTTGCTCGGTGCT 60.957 55.000 3.53 0.00 43.37 4.40
3463 3720 0.167470 CAAGATGTTGCTCGGTGCTG 59.833 55.000 3.53 0.00 43.37 4.41
3464 3721 0.035317 AAGATGTTGCTCGGTGCTGA 59.965 50.000 3.53 0.00 43.37 4.26
3465 3722 0.251354 AGATGTTGCTCGGTGCTGAT 59.749 50.000 3.53 0.00 43.37 2.90
3466 3723 1.089920 GATGTTGCTCGGTGCTGATT 58.910 50.000 3.53 0.00 43.37 2.57
3467 3724 1.063174 GATGTTGCTCGGTGCTGATTC 59.937 52.381 3.53 0.00 43.37 2.52
3468 3725 0.250252 TGTTGCTCGGTGCTGATTCA 60.250 50.000 3.53 0.00 43.37 2.57
3469 3726 0.445436 GTTGCTCGGTGCTGATTCAG 59.555 55.000 9.40 9.40 43.37 3.02
3470 3727 0.321346 TTGCTCGGTGCTGATTCAGA 59.679 50.000 17.87 0.08 43.37 3.27
3471 3728 0.321346 TGCTCGGTGCTGATTCAGAA 59.679 50.000 17.87 3.67 43.37 3.02
3472 3729 1.005340 GCTCGGTGCTGATTCAGAAG 58.995 55.000 17.87 6.90 38.95 2.85
3473 3730 1.674221 GCTCGGTGCTGATTCAGAAGT 60.674 52.381 17.87 0.00 38.95 3.01
3474 3731 2.693069 CTCGGTGCTGATTCAGAAGTT 58.307 47.619 17.87 0.00 32.44 2.66
3475 3732 2.414481 CTCGGTGCTGATTCAGAAGTTG 59.586 50.000 17.87 0.00 32.44 3.16
3476 3733 2.037121 TCGGTGCTGATTCAGAAGTTGA 59.963 45.455 17.87 2.40 32.44 3.18
3477 3734 2.414481 CGGTGCTGATTCAGAAGTTGAG 59.586 50.000 17.87 0.00 37.07 3.02
3478 3735 2.161211 GGTGCTGATTCAGAAGTTGAGC 59.839 50.000 17.87 0.72 37.07 4.26
3479 3736 2.071540 TGCTGATTCAGAAGTTGAGCG 58.928 47.619 17.87 0.00 37.07 5.03
3480 3737 2.072298 GCTGATTCAGAAGTTGAGCGT 58.928 47.619 17.87 0.00 37.07 5.07
3481 3738 2.093467 GCTGATTCAGAAGTTGAGCGTC 59.907 50.000 17.87 0.00 37.07 5.19
3482 3739 3.320626 CTGATTCAGAAGTTGAGCGTCA 58.679 45.455 8.00 0.00 37.07 4.35
3483 3740 3.320626 TGATTCAGAAGTTGAGCGTCAG 58.679 45.455 0.00 0.00 37.07 3.51
3484 3741 3.005791 TGATTCAGAAGTTGAGCGTCAGA 59.994 43.478 0.00 0.00 37.07 3.27
3485 3742 3.452755 TTCAGAAGTTGAGCGTCAGAA 57.547 42.857 0.00 0.00 37.07 3.02
3486 3743 3.667497 TCAGAAGTTGAGCGTCAGAAT 57.333 42.857 0.00 0.00 0.00 2.40
3487 3744 3.995199 TCAGAAGTTGAGCGTCAGAATT 58.005 40.909 0.00 0.00 0.00 2.17
3488 3745 3.742882 TCAGAAGTTGAGCGTCAGAATTG 59.257 43.478 0.00 0.00 0.00 2.32
3489 3746 3.070018 AGAAGTTGAGCGTCAGAATTGG 58.930 45.455 0.00 0.00 0.00 3.16
3490 3747 2.550830 AGTTGAGCGTCAGAATTGGT 57.449 45.000 0.00 0.00 0.00 3.67
3491 3748 2.146342 AGTTGAGCGTCAGAATTGGTG 58.854 47.619 0.00 0.00 0.00 4.17
3492 3749 1.197721 GTTGAGCGTCAGAATTGGTGG 59.802 52.381 0.00 0.00 0.00 4.61
3493 3750 0.396435 TGAGCGTCAGAATTGGTGGT 59.604 50.000 0.00 0.00 0.00 4.16
3494 3751 0.798776 GAGCGTCAGAATTGGTGGTG 59.201 55.000 0.00 0.00 0.00 4.17
3495 3752 0.108585 AGCGTCAGAATTGGTGGTGT 59.891 50.000 0.00 0.00 0.00 4.16
3496 3753 1.346395 AGCGTCAGAATTGGTGGTGTA 59.654 47.619 0.00 0.00 0.00 2.90
3497 3754 2.147958 GCGTCAGAATTGGTGGTGTAA 58.852 47.619 0.00 0.00 0.00 2.41
3498 3755 2.550606 GCGTCAGAATTGGTGGTGTAAA 59.449 45.455 0.00 0.00 0.00 2.01
3499 3756 3.364964 GCGTCAGAATTGGTGGTGTAAAG 60.365 47.826 0.00 0.00 0.00 1.85
3500 3757 3.364964 CGTCAGAATTGGTGGTGTAAAGC 60.365 47.826 0.00 0.00 0.00 3.51
3501 3758 3.568007 GTCAGAATTGGTGGTGTAAAGCA 59.432 43.478 0.00 0.00 0.00 3.91
3502 3759 4.037446 GTCAGAATTGGTGGTGTAAAGCAA 59.963 41.667 0.00 0.00 39.17 3.91
3503 3760 4.278170 TCAGAATTGGTGGTGTAAAGCAAG 59.722 41.667 0.00 0.00 38.32 4.01
3504 3761 3.005791 AGAATTGGTGGTGTAAAGCAAGC 59.994 43.478 0.00 0.00 38.32 4.01
3505 3762 1.036707 TTGGTGGTGTAAAGCAAGCC 58.963 50.000 0.00 0.00 31.75 4.35
3506 3763 0.106469 TGGTGGTGTAAAGCAAGCCA 60.106 50.000 0.00 0.00 0.00 4.75
3507 3764 1.036707 GGTGGTGTAAAGCAAGCCAA 58.963 50.000 0.00 0.00 0.00 4.52
3508 3765 1.410882 GGTGGTGTAAAGCAAGCCAAA 59.589 47.619 0.00 0.00 0.00 3.28
3509 3766 2.037121 GGTGGTGTAAAGCAAGCCAAAT 59.963 45.455 0.00 0.00 0.00 2.32
3510 3767 3.494223 GGTGGTGTAAAGCAAGCCAAATT 60.494 43.478 0.00 0.00 0.00 1.82
3511 3768 4.126437 GTGGTGTAAAGCAAGCCAAATTT 58.874 39.130 0.00 0.00 0.00 1.82
3512 3769 4.574421 GTGGTGTAAAGCAAGCCAAATTTT 59.426 37.500 0.00 0.00 0.00 1.82
3513 3770 4.574013 TGGTGTAAAGCAAGCCAAATTTTG 59.426 37.500 1.99 1.99 0.00 2.44
3514 3771 4.574421 GGTGTAAAGCAAGCCAAATTTTGT 59.426 37.500 8.26 0.00 0.00 2.83
3515 3772 5.500825 GTGTAAAGCAAGCCAAATTTTGTG 58.499 37.500 8.26 1.80 0.00 3.33
3516 3773 5.293079 GTGTAAAGCAAGCCAAATTTTGTGA 59.707 36.000 8.26 0.00 0.00 3.58
3517 3774 5.523188 TGTAAAGCAAGCCAAATTTTGTGAG 59.477 36.000 8.26 0.00 0.00 3.51
3518 3775 2.486918 AGCAAGCCAAATTTTGTGAGC 58.513 42.857 8.26 4.85 0.00 4.26
3519 3776 1.532437 GCAAGCCAAATTTTGTGAGCC 59.468 47.619 8.26 0.00 0.00 4.70
3520 3777 2.807837 GCAAGCCAAATTTTGTGAGCCT 60.808 45.455 8.26 0.00 0.00 4.58
3521 3778 3.469739 CAAGCCAAATTTTGTGAGCCTT 58.530 40.909 8.26 0.99 0.00 4.35
3522 3779 3.843893 AGCCAAATTTTGTGAGCCTTT 57.156 38.095 8.26 0.00 0.00 3.11
3523 3780 4.155063 AGCCAAATTTTGTGAGCCTTTT 57.845 36.364 8.26 0.00 0.00 2.27
3524 3781 3.878699 AGCCAAATTTTGTGAGCCTTTTG 59.121 39.130 8.26 0.00 0.00 2.44
3525 3782 3.548616 GCCAAATTTTGTGAGCCTTTTGC 60.549 43.478 8.26 0.00 41.71 3.68
3526 3783 3.626670 CCAAATTTTGTGAGCCTTTTGCA 59.373 39.130 8.26 0.00 44.83 4.08
3527 3784 4.260866 CCAAATTTTGTGAGCCTTTTGCAG 60.261 41.667 8.26 0.00 44.83 4.41
3528 3785 3.825143 ATTTTGTGAGCCTTTTGCAGT 57.175 38.095 0.00 0.00 44.83 4.40
3529 3786 4.935352 ATTTTGTGAGCCTTTTGCAGTA 57.065 36.364 0.00 0.00 44.83 2.74
3530 3787 3.988379 TTTGTGAGCCTTTTGCAGTAG 57.012 42.857 0.00 0.00 44.83 2.57
3531 3788 1.896220 TGTGAGCCTTTTGCAGTAGG 58.104 50.000 10.91 10.91 44.83 3.18
3532 3789 1.419762 TGTGAGCCTTTTGCAGTAGGA 59.580 47.619 17.67 0.00 44.83 2.94
3533 3790 2.040278 TGTGAGCCTTTTGCAGTAGGAT 59.960 45.455 17.67 12.54 44.83 3.24
3534 3791 2.680339 GTGAGCCTTTTGCAGTAGGATC 59.320 50.000 21.14 21.14 45.08 3.36
3535 3792 2.991250 GAGCCTTTTGCAGTAGGATCA 58.009 47.619 22.34 0.00 44.42 2.92
3536 3793 3.549794 GAGCCTTTTGCAGTAGGATCAT 58.450 45.455 22.34 6.50 44.42 2.45
3537 3794 3.549794 AGCCTTTTGCAGTAGGATCATC 58.450 45.455 17.67 2.55 44.83 2.92
3538 3795 3.201708 AGCCTTTTGCAGTAGGATCATCT 59.798 43.478 17.67 4.49 44.83 2.90
3539 3796 3.950395 GCCTTTTGCAGTAGGATCATCTT 59.050 43.478 17.67 0.00 40.77 2.40
3540 3797 4.400567 GCCTTTTGCAGTAGGATCATCTTT 59.599 41.667 17.67 0.00 40.77 2.52
3541 3798 5.590259 GCCTTTTGCAGTAGGATCATCTTTA 59.410 40.000 17.67 0.00 40.77 1.85
3542 3799 6.095440 GCCTTTTGCAGTAGGATCATCTTTAA 59.905 38.462 17.67 0.00 40.77 1.52
3543 3800 7.475840 CCTTTTGCAGTAGGATCATCTTTAAC 58.524 38.462 9.93 0.00 33.13 2.01
3544 3801 7.337942 CCTTTTGCAGTAGGATCATCTTTAACT 59.662 37.037 9.93 0.00 33.13 2.24
3545 3802 9.383519 CTTTTGCAGTAGGATCATCTTTAACTA 57.616 33.333 0.00 0.00 0.00 2.24
3546 3803 9.733556 TTTTGCAGTAGGATCATCTTTAACTAA 57.266 29.630 0.00 0.00 0.00 2.24
3547 3804 9.733556 TTTGCAGTAGGATCATCTTTAACTAAA 57.266 29.630 0.00 0.00 0.00 1.85
3548 3805 8.718102 TGCAGTAGGATCATCTTTAACTAAAC 57.282 34.615 0.00 0.00 0.00 2.01
3549 3806 8.540388 TGCAGTAGGATCATCTTTAACTAAACT 58.460 33.333 0.00 0.00 0.00 2.66
3550 3807 9.384764 GCAGTAGGATCATCTTTAACTAAACTT 57.615 33.333 0.00 0.00 0.00 2.66
3584 3841 8.346476 TGGTAAATTTTGTCAATTTTCACTCG 57.654 30.769 0.00 0.00 32.64 4.18
3585 3842 7.976734 TGGTAAATTTTGTCAATTTTCACTCGT 59.023 29.630 0.00 0.00 32.64 4.18
3586 3843 8.813282 GGTAAATTTTGTCAATTTTCACTCGTT 58.187 29.630 0.00 0.00 32.64 3.85
3589 3846 9.753669 AAATTTTGTCAATTTTCACTCGTTTTC 57.246 25.926 0.00 0.00 0.00 2.29
3590 3847 7.875316 TTTTGTCAATTTTCACTCGTTTTCA 57.125 28.000 0.00 0.00 0.00 2.69
3591 3848 6.862944 TTGTCAATTTTCACTCGTTTTCAC 57.137 33.333 0.00 0.00 0.00 3.18
3592 3849 5.336744 TGTCAATTTTCACTCGTTTTCACC 58.663 37.500 0.00 0.00 0.00 4.02
3593 3850 4.738252 GTCAATTTTCACTCGTTTTCACCC 59.262 41.667 0.00 0.00 0.00 4.61
3594 3851 4.642885 TCAATTTTCACTCGTTTTCACCCT 59.357 37.500 0.00 0.00 0.00 4.34
3595 3852 5.823570 TCAATTTTCACTCGTTTTCACCCTA 59.176 36.000 0.00 0.00 0.00 3.53
3596 3853 6.319152 TCAATTTTCACTCGTTTTCACCCTAA 59.681 34.615 0.00 0.00 0.00 2.69
3597 3854 6.702716 ATTTTCACTCGTTTTCACCCTAAA 57.297 33.333 0.00 0.00 0.00 1.85
3598 3855 5.488645 TTTCACTCGTTTTCACCCTAAAC 57.511 39.130 0.00 0.00 33.28 2.01
3599 3856 4.139859 TCACTCGTTTTCACCCTAAACA 57.860 40.909 0.00 0.00 35.69 2.83
3600 3857 4.710324 TCACTCGTTTTCACCCTAAACAT 58.290 39.130 0.00 0.00 35.69 2.71
3601 3858 5.127491 TCACTCGTTTTCACCCTAAACATT 58.873 37.500 0.00 0.00 35.69 2.71
3602 3859 5.237779 TCACTCGTTTTCACCCTAAACATTC 59.762 40.000 0.00 0.00 35.69 2.67
3603 3860 5.008217 CACTCGTTTTCACCCTAAACATTCA 59.992 40.000 0.00 0.00 35.69 2.57
3604 3861 5.238650 ACTCGTTTTCACCCTAAACATTCAG 59.761 40.000 0.00 0.00 35.69 3.02
3605 3862 5.127491 TCGTTTTCACCCTAAACATTCAGT 58.873 37.500 0.00 0.00 35.69 3.41
3606 3863 5.591067 TCGTTTTCACCCTAAACATTCAGTT 59.409 36.000 0.00 0.00 43.89 3.16
3621 3878 7.948278 ACATTCAGTTTATAGGATTCGTAGC 57.052 36.000 0.00 0.00 0.00 3.58
3622 3879 7.497595 ACATTCAGTTTATAGGATTCGTAGCA 58.502 34.615 0.00 0.00 0.00 3.49
3623 3880 7.985184 ACATTCAGTTTATAGGATTCGTAGCAA 59.015 33.333 0.00 0.00 0.00 3.91
3624 3881 8.826710 CATTCAGTTTATAGGATTCGTAGCAAA 58.173 33.333 0.00 0.00 0.00 3.68
3625 3882 8.420374 TTCAGTTTATAGGATTCGTAGCAAAG 57.580 34.615 0.00 0.00 0.00 2.77
3626 3883 7.778083 TCAGTTTATAGGATTCGTAGCAAAGA 58.222 34.615 0.00 0.00 0.00 2.52
3627 3884 7.921214 TCAGTTTATAGGATTCGTAGCAAAGAG 59.079 37.037 0.00 0.00 0.00 2.85
3628 3885 7.169982 CAGTTTATAGGATTCGTAGCAAAGAGG 59.830 40.741 0.00 0.00 0.00 3.69
3629 3886 6.726490 TTATAGGATTCGTAGCAAAGAGGT 57.274 37.500 0.00 0.00 0.00 3.85
3630 3887 3.983044 AGGATTCGTAGCAAAGAGGTT 57.017 42.857 0.00 0.00 0.00 3.50
3631 3888 3.863041 AGGATTCGTAGCAAAGAGGTTC 58.137 45.455 0.00 0.00 0.00 3.62
3632 3889 3.515901 AGGATTCGTAGCAAAGAGGTTCT 59.484 43.478 0.00 0.00 0.00 3.01
3633 3890 3.866327 GGATTCGTAGCAAAGAGGTTCTC 59.134 47.826 0.00 0.00 0.00 2.87
3634 3891 4.382147 GGATTCGTAGCAAAGAGGTTCTCT 60.382 45.833 0.00 0.00 43.37 3.10
3635 3892 3.851976 TCGTAGCAAAGAGGTTCTCTC 57.148 47.619 0.00 0.00 40.28 3.20
3636 3893 3.154710 TCGTAGCAAAGAGGTTCTCTCA 58.845 45.455 0.00 0.00 44.81 3.27
3637 3894 3.764434 TCGTAGCAAAGAGGTTCTCTCAT 59.236 43.478 0.00 0.00 44.81 2.90
3638 3895 3.862267 CGTAGCAAAGAGGTTCTCTCATG 59.138 47.826 0.00 2.88 44.81 3.07
3639 3896 3.347077 AGCAAAGAGGTTCTCTCATGG 57.653 47.619 0.00 0.00 44.81 3.66
3640 3897 2.909006 AGCAAAGAGGTTCTCTCATGGA 59.091 45.455 0.00 0.00 44.81 3.41
3641 3898 3.328931 AGCAAAGAGGTTCTCTCATGGAA 59.671 43.478 0.00 0.00 44.81 3.53
3642 3899 4.074970 GCAAAGAGGTTCTCTCATGGAAA 58.925 43.478 0.00 0.00 44.81 3.13
3643 3900 4.704057 GCAAAGAGGTTCTCTCATGGAAAT 59.296 41.667 0.00 0.00 44.81 2.17
3644 3901 5.882557 GCAAAGAGGTTCTCTCATGGAAATA 59.117 40.000 0.00 0.00 44.81 1.40
3645 3902 6.038050 GCAAAGAGGTTCTCTCATGGAAATAG 59.962 42.308 0.00 0.00 44.81 1.73
3646 3903 6.882768 AAGAGGTTCTCTCATGGAAATAGT 57.117 37.500 0.00 0.00 44.81 2.12
3647 3904 6.478512 AGAGGTTCTCTCATGGAAATAGTC 57.521 41.667 0.00 0.00 44.81 2.59
3648 3905 6.201591 AGAGGTTCTCTCATGGAAATAGTCT 58.798 40.000 0.00 0.00 44.81 3.24
3649 3906 6.323739 AGAGGTTCTCTCATGGAAATAGTCTC 59.676 42.308 0.00 0.00 44.81 3.36
3650 3907 5.960811 AGGTTCTCTCATGGAAATAGTCTCA 59.039 40.000 0.00 0.00 0.00 3.27
3651 3908 6.614906 AGGTTCTCTCATGGAAATAGTCTCAT 59.385 38.462 0.00 0.00 0.00 2.90
3652 3909 6.928492 GGTTCTCTCATGGAAATAGTCTCATC 59.072 42.308 0.00 0.00 0.00 2.92
3653 3910 7.201992 GGTTCTCTCATGGAAATAGTCTCATCT 60.202 40.741 0.00 0.00 0.00 2.90
3654 3911 7.523293 TCTCTCATGGAAATAGTCTCATCTC 57.477 40.000 0.00 0.00 0.00 2.75
3655 3912 7.296856 TCTCTCATGGAAATAGTCTCATCTCT 58.703 38.462 0.00 0.00 0.00 3.10
3656 3913 7.784073 TCTCTCATGGAAATAGTCTCATCTCTT 59.216 37.037 0.00 0.00 0.00 2.85
3657 3914 7.950512 TCTCATGGAAATAGTCTCATCTCTTC 58.049 38.462 0.00 0.00 0.00 2.87
3658 3915 7.562821 TCTCATGGAAATAGTCTCATCTCTTCA 59.437 37.037 0.00 0.00 0.00 3.02
3659 3916 8.082672 TCATGGAAATAGTCTCATCTCTTCAA 57.917 34.615 0.00 0.00 0.00 2.69
3660 3917 7.984050 TCATGGAAATAGTCTCATCTCTTCAAC 59.016 37.037 0.00 0.00 0.00 3.18
3661 3918 7.487822 TGGAAATAGTCTCATCTCTTCAACT 57.512 36.000 0.00 0.00 0.00 3.16
3662 3919 7.326454 TGGAAATAGTCTCATCTCTTCAACTG 58.674 38.462 0.00 0.00 0.00 3.16
3663 3920 7.038729 TGGAAATAGTCTCATCTCTTCAACTGT 60.039 37.037 0.00 0.00 0.00 3.55
3664 3921 7.277539 GGAAATAGTCTCATCTCTTCAACTGTG 59.722 40.741 0.00 0.00 0.00 3.66
3665 3922 3.924144 AGTCTCATCTCTTCAACTGTGC 58.076 45.455 0.00 0.00 0.00 4.57
3666 3923 3.323115 AGTCTCATCTCTTCAACTGTGCA 59.677 43.478 0.00 0.00 0.00 4.57
3667 3924 3.679025 GTCTCATCTCTTCAACTGTGCAG 59.321 47.826 0.00 0.00 0.00 4.41
3668 3925 3.323115 TCTCATCTCTTCAACTGTGCAGT 59.677 43.478 0.00 0.00 44.94 4.40
3669 3926 3.396560 TCATCTCTTCAACTGTGCAGTG 58.603 45.455 5.53 1.26 41.58 3.66
3670 3927 1.586422 TCTCTTCAACTGTGCAGTGC 58.414 50.000 8.58 8.58 41.58 4.40
3671 3928 1.134431 TCTCTTCAACTGTGCAGTGCA 60.134 47.619 15.37 15.37 41.58 4.57
3672 3929 1.672363 CTCTTCAACTGTGCAGTGCAA 59.328 47.619 21.67 9.49 41.47 4.08
3673 3930 2.090760 TCTTCAACTGTGCAGTGCAAA 58.909 42.857 21.67 14.68 41.47 3.68
3674 3931 2.491298 TCTTCAACTGTGCAGTGCAAAA 59.509 40.909 21.67 10.57 41.47 2.44
3675 3932 3.130869 TCTTCAACTGTGCAGTGCAAAAT 59.869 39.130 21.67 0.00 41.47 1.82
3676 3933 3.523606 TCAACTGTGCAGTGCAAAATT 57.476 38.095 21.67 8.01 41.47 1.82
3677 3934 3.859443 TCAACTGTGCAGTGCAAAATTT 58.141 36.364 21.67 7.70 41.47 1.82
3678 3935 3.617706 TCAACTGTGCAGTGCAAAATTTG 59.382 39.130 21.67 19.20 41.47 2.32
3679 3936 3.249986 ACTGTGCAGTGCAAAATTTGT 57.750 38.095 21.67 5.66 41.47 2.83
3680 3937 2.931325 ACTGTGCAGTGCAAAATTTGTG 59.069 40.909 21.67 3.70 41.47 3.33
3681 3938 2.931325 CTGTGCAGTGCAAAATTTGTGT 59.069 40.909 21.67 0.00 41.47 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.665695 TCAACCCCTAAAGAAAACTTACTGT 58.334 36.000 0.00 0.00 0.00 3.55
1 2 7.576861 TTCAACCCCTAAAGAAAACTTACTG 57.423 36.000 0.00 0.00 0.00 2.74
2 3 8.598202 TTTTCAACCCCTAAAGAAAACTTACT 57.402 30.769 0.00 0.00 35.68 2.24
25 26 5.471257 TCCAAACAAAGCGTTACTGTTTTT 58.529 33.333 8.92 0.00 40.40 1.94
26 27 5.061920 TCCAAACAAAGCGTTACTGTTTT 57.938 34.783 8.92 0.00 40.40 2.43
27 28 4.705337 TCCAAACAAAGCGTTACTGTTT 57.295 36.364 6.58 6.58 42.49 2.83
28 29 4.097286 ACATCCAAACAAAGCGTTACTGTT 59.903 37.500 0.00 0.00 36.59 3.16
29 30 3.630312 ACATCCAAACAAAGCGTTACTGT 59.370 39.130 0.00 0.00 36.59 3.55
30 31 4.223320 ACATCCAAACAAAGCGTTACTG 57.777 40.909 0.00 0.00 36.59 2.74
31 32 4.911514 AACATCCAAACAAAGCGTTACT 57.088 36.364 0.00 0.00 36.59 2.24
32 33 4.317769 GCAAACATCCAAACAAAGCGTTAC 60.318 41.667 0.00 0.00 36.59 2.50
33 34 3.799420 GCAAACATCCAAACAAAGCGTTA 59.201 39.130 0.00 0.00 36.59 3.18
34 35 2.607180 GCAAACATCCAAACAAAGCGTT 59.393 40.909 0.00 0.00 40.50 4.84
35 36 2.200899 GCAAACATCCAAACAAAGCGT 58.799 42.857 0.00 0.00 0.00 5.07
36 37 2.200067 TGCAAACATCCAAACAAAGCG 58.800 42.857 0.00 0.00 0.00 4.68
40 41 3.135348 TCCCAATGCAAACATCCAAACAA 59.865 39.130 0.00 0.00 34.62 2.83
65 66 1.002201 TCAACCCAATGCAATGCCAAG 59.998 47.619 1.53 0.00 0.00 3.61
541 649 3.561120 TTCGCTTCCCCCGCATGTT 62.561 57.895 0.00 0.00 0.00 2.71
553 661 1.076332 GGTATTCGCACAGTTCGCTT 58.924 50.000 0.00 0.00 0.00 4.68
726 834 3.671433 CGTTTGGATGTTGGCATTGAGAG 60.671 47.826 0.00 0.00 35.07 3.20
735 843 0.667993 ACACTGCGTTTGGATGTTGG 59.332 50.000 0.00 0.00 0.00 3.77
752 860 0.907704 ATCAGGCCCGTCCACTTACA 60.908 55.000 0.00 0.00 37.29 2.41
768 876 1.962807 CACAAAGCCCAAACCAGATCA 59.037 47.619 0.00 0.00 0.00 2.92
774 882 0.105964 GGTTCCACAAAGCCCAAACC 59.894 55.000 0.00 0.00 0.00 3.27
775 883 1.119684 AGGTTCCACAAAGCCCAAAC 58.880 50.000 0.00 0.00 35.94 2.93
776 884 2.312390 GTAGGTTCCACAAAGCCCAAA 58.688 47.619 0.00 0.00 35.94 3.28
804 912 1.838396 CAAGGGCTTTTGGCTGGGT 60.838 57.895 0.00 0.00 45.25 4.51
810 918 3.694538 CGGGGCAAGGGCTTTTGG 61.695 66.667 4.86 0.00 40.87 3.28
811 919 1.543944 ATTCGGGGCAAGGGCTTTTG 61.544 55.000 0.00 0.00 40.87 2.44
812 920 1.229177 ATTCGGGGCAAGGGCTTTT 60.229 52.632 0.00 0.00 40.87 2.27
851 960 0.887387 TTCCCCTTTCTTTGGTCGCG 60.887 55.000 0.00 0.00 0.00 5.87
969 1078 0.173481 GTGCTGCAGTACCTGATCGA 59.827 55.000 22.90 0.00 32.44 3.59
978 1087 1.596934 GCTACCAGGTGCTGCAGTA 59.403 57.895 16.64 8.31 0.00 2.74
981 1090 2.930019 AGGCTACCAGGTGCTGCA 60.930 61.111 0.76 0.00 0.00 4.41
1092 1201 5.443283 AGCTCTGCATTTCTCAATATTCCA 58.557 37.500 0.00 0.00 0.00 3.53
1129 1238 3.704566 ACTTCCCGATTACACATCTGCTA 59.295 43.478 0.00 0.00 0.00 3.49
1140 1249 1.274167 AGTTCACGCACTTCCCGATTA 59.726 47.619 0.00 0.00 0.00 1.75
1206 1315 3.879682 CCGCCACCATGACGCATG 61.880 66.667 11.41 11.41 41.10 4.06
1213 1322 2.971428 CTACCGCTACCGCCACCATG 62.971 65.000 0.00 0.00 0.00 3.66
1218 1327 3.833645 CAGCTACCGCTACCGCCA 61.834 66.667 0.00 0.00 46.99 5.69
1233 1342 0.313043 CTGAAACTGCAACCAGCCAG 59.687 55.000 0.00 0.00 43.02 4.85
1303 1412 1.089920 ACTACCACTACCACTACGCG 58.910 55.000 3.53 3.53 0.00 6.01
1329 1438 2.031333 GCTTTCTGCAGACCACTTCAAG 60.031 50.000 18.03 16.05 42.31 3.02
1353 1462 7.881643 ATAACATGAGCTAGAAACATCGATC 57.118 36.000 0.00 0.00 0.00 3.69
1356 1465 9.803130 CATAAATAACATGAGCTAGAAACATCG 57.197 33.333 0.00 0.00 0.00 3.84
1390 1499 4.284234 AGAACAGGGTTCCCAAATTTCATG 59.716 41.667 10.73 0.00 0.00 3.07
1466 1575 8.092068 TCAGAACGAGAACCTTTAAATGATACA 58.908 33.333 0.00 0.00 0.00 2.29
1522 1642 0.595567 TTGCTGCGCAAAGCTGAAAG 60.596 50.000 20.56 3.28 45.96 2.62
1575 1695 5.008613 ACATTCAGCGTATTTTGAACACAGT 59.991 36.000 0.00 0.00 36.26 3.55
1590 1710 0.737367 TTCCTCGAGCACATTCAGCG 60.737 55.000 6.99 0.00 37.01 5.18
1593 1713 2.300152 AGTTCTTCCTCGAGCACATTCA 59.700 45.455 6.99 0.00 0.00 2.57
1709 1829 5.936956 ACTTGCAAGATTTGTCCAAAAACAA 59.063 32.000 32.50 0.00 37.37 2.83
1768 1888 1.166129 GCACGAGTGAGACTCTACCA 58.834 55.000 7.50 0.00 42.92 3.25
1799 1919 2.978156 TTGGGGTCTTCAAAGCTGAT 57.022 45.000 0.00 0.00 0.00 2.90
1800 1920 2.978156 ATTGGGGTCTTCAAAGCTGA 57.022 45.000 0.00 0.00 0.00 4.26
1801 1921 4.678840 GCAATATTGGGGTCTTCAAAGCTG 60.679 45.833 17.02 0.00 0.00 4.24
1828 1948 7.472543 AGCACAATGTTTCTATTTATTCGGAC 58.527 34.615 0.00 0.00 0.00 4.79
1830 1950 7.754924 ACAAGCACAATGTTTCTATTTATTCGG 59.245 33.333 0.00 0.00 0.00 4.30
1831 1951 8.673626 ACAAGCACAATGTTTCTATTTATTCG 57.326 30.769 0.00 0.00 0.00 3.34
1862 1982 5.819901 AGCCAGCTTATTAGTTTCTGTGATC 59.180 40.000 0.00 0.00 0.00 2.92
1961 2081 7.281774 CACAGGCATGAACTAATTTATCAGACT 59.718 37.037 4.84 0.00 0.00 3.24
2002 2122 8.719648 GTGTCTACGTAGTATATGAGCTGTTAT 58.280 37.037 21.53 0.00 44.56 1.89
2039 2159 8.425577 AAAGAGATATACTTTTGTCGGTGATG 57.574 34.615 0.00 0.00 34.50 3.07
2042 2162 9.146984 TGTAAAAGAGATATACTTTTGTCGGTG 57.853 33.333 20.69 0.00 44.01 4.94
2067 2188 6.706270 ACTACGCCATATGAAGGACTTAAATG 59.294 38.462 3.65 0.00 0.00 2.32
2070 2191 5.864418 ACTACGCCATATGAAGGACTTAA 57.136 39.130 3.65 0.00 0.00 1.85
2071 2192 5.597182 AGAACTACGCCATATGAAGGACTTA 59.403 40.000 3.65 0.00 0.00 2.24
2097 2218 3.694566 GCTTCTAAACCCAAATCGATGGT 59.305 43.478 0.00 0.00 38.91 3.55
2098 2219 3.947834 AGCTTCTAAACCCAAATCGATGG 59.052 43.478 0.00 0.00 40.35 3.51
2155 2277 3.058639 GCTGGTGCTACTTTCAAAGACAG 60.059 47.826 3.49 1.76 36.03 3.51
2177 2299 9.525409 CTTGGCTCTATAAAATTCCAAATGAAG 57.475 33.333 0.00 0.00 36.14 3.02
2207 2329 8.070034 TCGGACTATAAATCAAAACCTACAGA 57.930 34.615 0.00 0.00 0.00 3.41
2234 2356 0.329596 GTTCCTGGCAGGGTCAGAAT 59.670 55.000 32.23 0.00 37.47 2.40
2249 2371 0.310854 CAAGAACCGGCACAAGTTCC 59.689 55.000 0.00 0.00 40.71 3.62
2269 2391 0.321122 CTCTGTTCAGGCACCACTCC 60.321 60.000 0.00 0.00 0.00 3.85
2273 2395 1.419381 TACACTCTGTTCAGGCACCA 58.581 50.000 0.00 0.00 0.00 4.17
2276 2398 3.211045 GGTTTTACACTCTGTTCAGGCA 58.789 45.455 0.00 0.00 0.00 4.75
2388 2511 5.155278 TCTCAAAATTCAGGCAAATGCAT 57.845 34.783 7.80 0.00 44.36 3.96
2429 2552 3.609853 TCAGGCATAATGTGGTCAGAAC 58.390 45.455 0.00 0.00 0.00 3.01
2443 2566 5.021458 ACCAAATTCTCAAGATTCAGGCAT 58.979 37.500 0.00 0.00 0.00 4.40
2444 2567 4.410099 ACCAAATTCTCAAGATTCAGGCA 58.590 39.130 0.00 0.00 0.00 4.75
2446 2569 5.477984 TGGAACCAAATTCTCAAGATTCAGG 59.522 40.000 0.00 0.00 37.48 3.86
2449 2572 5.048713 ACGTGGAACCAAATTCTCAAGATTC 60.049 40.000 0.00 0.00 37.48 2.52
2450 2573 4.827284 ACGTGGAACCAAATTCTCAAGATT 59.173 37.500 0.00 0.00 37.48 2.40
2451 2574 4.216257 CACGTGGAACCAAATTCTCAAGAT 59.784 41.667 7.95 0.00 37.48 2.40
2455 2578 3.201353 TCACGTGGAACCAAATTCTCA 57.799 42.857 17.00 0.00 37.48 3.27
2456 2579 4.475944 CAATCACGTGGAACCAAATTCTC 58.524 43.478 17.00 0.00 37.48 2.87
2457 2580 3.255642 CCAATCACGTGGAACCAAATTCT 59.744 43.478 17.00 0.00 41.65 2.40
2472 2651 7.538575 AGTAATTGTAAGCACATTCCAATCAC 58.461 34.615 0.00 0.00 33.76 3.06
2482 2661 6.040391 AGAGGCAAAAAGTAATTGTAAGCACA 59.960 34.615 0.00 0.00 0.00 4.57
2486 2665 9.178758 AGGATAGAGGCAAAAAGTAATTGTAAG 57.821 33.333 0.00 0.00 0.00 2.34
2491 2670 6.650120 TCGAGGATAGAGGCAAAAAGTAATT 58.350 36.000 0.00 0.00 0.00 1.40
2502 2685 0.032815 GCCACTTCGAGGATAGAGGC 59.967 60.000 7.41 7.41 40.14 4.70
2503 2686 1.403814 TGCCACTTCGAGGATAGAGG 58.596 55.000 0.00 0.00 0.00 3.69
2513 2696 1.336148 ACAATGCAACATGCCACTTCG 60.336 47.619 0.00 0.00 44.23 3.79
2531 2714 4.891168 TGCCAATATTAGTCTACTCGGACA 59.109 41.667 0.00 0.00 38.57 4.02
2532 2715 5.449107 TGCCAATATTAGTCTACTCGGAC 57.551 43.478 0.00 0.00 36.56 4.79
2533 2716 5.047306 CCATGCCAATATTAGTCTACTCGGA 60.047 44.000 0.00 0.00 0.00 4.55
2534 2717 5.171476 CCATGCCAATATTAGTCTACTCGG 58.829 45.833 0.00 0.00 0.00 4.63
2535 2718 4.627467 GCCATGCCAATATTAGTCTACTCG 59.373 45.833 0.00 0.00 0.00 4.18
2536 2719 5.551233 TGCCATGCCAATATTAGTCTACTC 58.449 41.667 0.00 0.00 0.00 2.59
2537 2720 5.307976 TCTGCCATGCCAATATTAGTCTACT 59.692 40.000 0.00 0.00 0.00 2.57
2538 2721 5.551233 TCTGCCATGCCAATATTAGTCTAC 58.449 41.667 0.00 0.00 0.00 2.59
2539 2722 5.823861 TCTGCCATGCCAATATTAGTCTA 57.176 39.130 0.00 0.00 0.00 2.59
2540 2723 4.712051 TCTGCCATGCCAATATTAGTCT 57.288 40.909 0.00 0.00 0.00 3.24
2541 2724 5.355350 GGTATCTGCCATGCCAATATTAGTC 59.645 44.000 0.00 0.00 0.00 2.59
2547 2730 2.981784 AGAGGTATCTGCCATGCCAATA 59.018 45.455 3.21 0.00 33.30 1.90
2557 2740 7.792374 TGAATTACATGAAAGAGGTATCTGC 57.208 36.000 0.00 0.00 35.37 4.26
2562 2745 7.041848 CGCATGATGAATTACATGAAAGAGGTA 60.042 37.037 17.88 0.00 44.28 3.08
2568 2751 5.503662 AGCGCATGATGAATTACATGAAA 57.496 34.783 11.47 0.00 44.28 2.69
2582 2766 2.670789 GCCAACATACAAAAGCGCATGA 60.671 45.455 11.47 0.00 0.00 3.07
2585 2769 0.670706 TGCCAACATACAAAAGCGCA 59.329 45.000 11.47 0.00 0.00 6.09
2650 2834 0.459489 CTCCTTGCTCTCTTCCTCGG 59.541 60.000 0.00 0.00 0.00 4.63
2651 2835 1.468985 TCTCCTTGCTCTCTTCCTCG 58.531 55.000 0.00 0.00 0.00 4.63
2655 2839 4.264460 TGTTCTTCTCCTTGCTCTCTTC 57.736 45.455 0.00 0.00 0.00 2.87
2704 2912 2.340210 TCCAAAAGCAGCAGTGTACA 57.660 45.000 0.00 0.00 0.00 2.90
2719 2927 3.640967 AGTAAGCAACTGCCAAATTCCAA 59.359 39.130 0.00 0.00 43.38 3.53
2842 3050 9.243637 GACACAACTTGCAAGTCAATAAAATAA 57.756 29.630 31.20 0.00 38.57 1.40
2867 3076 8.441311 AGTTATTGGAGGATAATGCTATCAGA 57.559 34.615 0.00 0.00 36.40 3.27
2893 3102 4.265893 TGAACACTTTGGTCAGCTAAACA 58.734 39.130 0.00 0.00 39.52 2.83
2903 3112 1.480545 GGCCAAACTGAACACTTTGGT 59.519 47.619 19.18 0.00 45.69 3.67
3009 3219 5.163764 GGCATTATGTTTTTAAGCTTTGGGC 60.164 40.000 3.20 0.00 42.19 5.36
3010 3220 5.936956 TGGCATTATGTTTTTAAGCTTTGGG 59.063 36.000 3.20 0.00 0.00 4.12
3011 3221 6.873076 TCTGGCATTATGTTTTTAAGCTTTGG 59.127 34.615 3.20 0.00 0.00 3.28
3013 3223 8.900983 TTTCTGGCATTATGTTTTTAAGCTTT 57.099 26.923 3.20 0.00 0.00 3.51
3014 3224 8.150296 ACTTTCTGGCATTATGTTTTTAAGCTT 58.850 29.630 3.48 3.48 0.00 3.74
3015 3225 7.670364 ACTTTCTGGCATTATGTTTTTAAGCT 58.330 30.769 0.00 0.00 0.00 3.74
3016 3226 7.889589 ACTTTCTGGCATTATGTTTTTAAGC 57.110 32.000 0.00 0.00 0.00 3.09
3017 3227 8.223100 GCAACTTTCTGGCATTATGTTTTTAAG 58.777 33.333 0.00 0.00 0.00 1.85
3018 3228 7.172361 GGCAACTTTCTGGCATTATGTTTTTAA 59.828 33.333 0.00 0.00 41.38 1.52
3073 3322 1.414181 CCGAGTGCATCCAGAAGGTAT 59.586 52.381 0.00 0.00 35.89 2.73
3108 3357 4.339247 CCAGCTTTGTCAAAAAGAGAAGGA 59.661 41.667 0.00 0.00 29.30 3.36
3110 3359 4.047142 GCCAGCTTTGTCAAAAAGAGAAG 58.953 43.478 0.00 0.00 30.41 2.85
3112 3361 2.362077 GGCCAGCTTTGTCAAAAAGAGA 59.638 45.455 0.00 0.00 0.00 3.10
3113 3362 2.546584 GGGCCAGCTTTGTCAAAAAGAG 60.547 50.000 4.39 0.00 0.00 2.85
3127 3376 1.260544 ACATTCAAAAGAGGGCCAGC 58.739 50.000 6.18 0.00 0.00 4.85
3131 3381 3.258123 TGGCTAAACATTCAAAAGAGGGC 59.742 43.478 0.00 0.00 0.00 5.19
3160 3411 4.510571 TGATTAAAGTTTCGGACTAGGGC 58.489 43.478 0.00 0.00 37.72 5.19
3169 3420 9.612620 AAAGAGCTATGTTTGATTAAAGTTTCG 57.387 29.630 0.00 0.00 0.00 3.46
3185 3436 5.062308 GGTCACGTTGAGTAAAAGAGCTATG 59.938 44.000 0.00 0.00 0.00 2.23
3197 3448 0.762418 TGGAATGGGTCACGTTGAGT 59.238 50.000 0.00 0.00 0.00 3.41
3203 3454 0.104120 TAGCGATGGAATGGGTCACG 59.896 55.000 0.00 0.00 33.83 4.35
3217 3468 1.897133 TGACCTAGCCAAGTTTAGCGA 59.103 47.619 0.00 0.00 0.00 4.93
3234 3485 1.527034 TCAAGATGCCTGTTGCTGAC 58.473 50.000 0.00 0.00 42.00 3.51
3253 3504 1.539827 CCGCCAAGTTTTTCTCGGAAT 59.460 47.619 0.00 0.00 39.23 3.01
3256 3507 1.515081 TACCGCCAAGTTTTTCTCGG 58.485 50.000 0.00 0.00 42.24 4.63
3257 3508 2.222729 CGATACCGCCAAGTTTTTCTCG 60.223 50.000 0.00 0.00 0.00 4.04
3273 3524 5.459762 CCCAAATCATCATTGTTTGCGATAC 59.540 40.000 0.00 0.00 32.84 2.24
3283 3534 4.142093 GGACTTGACCCCAAATCATCATTG 60.142 45.833 0.00 0.00 30.69 2.82
3289 3545 2.490718 CCTTGGACTTGACCCCAAATCA 60.491 50.000 0.00 0.00 41.41 2.57
3325 3581 6.900194 AGCTACTGCCTAGAATGGAAAATAA 58.100 36.000 0.00 0.00 40.80 1.40
3339 3595 0.607489 CAGCACCAAAGCTACTGCCT 60.607 55.000 0.00 0.00 44.54 4.75
3352 3608 1.073897 AGTTTGGGAGCTCAGCACC 59.926 57.895 17.19 4.15 38.54 5.01
3364 3620 0.861837 GACTGTGACGCTCAGTTTGG 59.138 55.000 13.19 0.00 44.68 3.28
3368 3625 1.000827 CTTCTGACTGTGACGCTCAGT 60.001 52.381 12.24 12.24 46.86 3.41
3379 3636 2.928757 CGAGGATCAAAGCTTCTGACTG 59.071 50.000 0.00 0.00 33.17 3.51
3383 3640 4.730035 GCAATTCGAGGATCAAAGCTTCTG 60.730 45.833 0.00 0.61 33.17 3.02
3386 3643 3.128242 CAGCAATTCGAGGATCAAAGCTT 59.872 43.478 0.00 0.00 33.17 3.74
3391 3648 3.440173 GGAAACAGCAATTCGAGGATCAA 59.560 43.478 0.00 0.00 33.17 2.57
3395 3652 2.859165 AGGAAACAGCAATTCGAGGA 57.141 45.000 0.00 0.00 0.00 3.71
3396 3653 2.159653 CGAAGGAAACAGCAATTCGAGG 60.160 50.000 0.00 0.00 44.01 4.63
3397 3654 2.726066 GCGAAGGAAACAGCAATTCGAG 60.726 50.000 9.56 0.00 44.01 4.04
3398 3655 1.196808 GCGAAGGAAACAGCAATTCGA 59.803 47.619 9.56 0.00 44.01 3.71
3399 3656 1.069296 TGCGAAGGAAACAGCAATTCG 60.069 47.619 1.55 1.55 44.09 3.34
3400 3657 2.226437 TCTGCGAAGGAAACAGCAATTC 59.774 45.455 0.00 0.00 37.13 2.17
3401 3658 2.229792 TCTGCGAAGGAAACAGCAATT 58.770 42.857 0.00 0.00 37.13 2.32
3402 3659 1.896220 TCTGCGAAGGAAACAGCAAT 58.104 45.000 0.00 0.00 37.13 3.56
3403 3660 1.674359 TTCTGCGAAGGAAACAGCAA 58.326 45.000 0.00 0.00 37.13 3.91
3404 3661 1.806542 GATTCTGCGAAGGAAACAGCA 59.193 47.619 0.00 0.00 36.39 4.41
3405 3662 1.201965 CGATTCTGCGAAGGAAACAGC 60.202 52.381 0.00 0.00 0.00 4.40
3406 3663 1.201965 GCGATTCTGCGAAGGAAACAG 60.202 52.381 0.00 0.00 0.00 3.16
3407 3664 0.796312 GCGATTCTGCGAAGGAAACA 59.204 50.000 0.00 0.00 0.00 2.83
3408 3665 0.097150 GGCGATTCTGCGAAGGAAAC 59.903 55.000 0.00 0.00 35.06 2.78
3409 3666 0.321210 TGGCGATTCTGCGAAGGAAA 60.321 50.000 0.00 0.00 35.06 3.13
3410 3667 0.321210 TTGGCGATTCTGCGAAGGAA 60.321 50.000 0.00 0.00 35.06 3.36
3411 3668 0.740868 CTTGGCGATTCTGCGAAGGA 60.741 55.000 13.32 0.00 44.10 3.36
3412 3669 1.717937 CTTGGCGATTCTGCGAAGG 59.282 57.895 13.32 0.00 44.10 3.46
3414 3671 1.234821 AAACTTGGCGATTCTGCGAA 58.765 45.000 0.00 0.00 35.06 4.70
3415 3672 1.234821 AAAACTTGGCGATTCTGCGA 58.765 45.000 0.00 0.00 35.06 5.10
3416 3673 1.978782 GAAAAACTTGGCGATTCTGCG 59.021 47.619 0.00 0.00 35.06 5.18
3417 3674 3.237628 GAGAAAAACTTGGCGATTCTGC 58.762 45.455 0.00 0.00 30.89 4.26
3418 3675 3.366374 GGGAGAAAAACTTGGCGATTCTG 60.366 47.826 0.00 0.00 30.89 3.02
3419 3676 2.820197 GGGAGAAAAACTTGGCGATTCT 59.180 45.455 0.00 0.00 33.28 2.40
3420 3677 2.094700 GGGGAGAAAAACTTGGCGATTC 60.095 50.000 0.00 0.00 0.00 2.52
3421 3678 1.893137 GGGGAGAAAAACTTGGCGATT 59.107 47.619 0.00 0.00 0.00 3.34
3422 3679 1.203001 TGGGGAGAAAAACTTGGCGAT 60.203 47.619 0.00 0.00 0.00 4.58
3423 3680 0.183971 TGGGGAGAAAAACTTGGCGA 59.816 50.000 0.00 0.00 0.00 5.54
3424 3681 0.313987 GTGGGGAGAAAAACTTGGCG 59.686 55.000 0.00 0.00 0.00 5.69
3425 3682 0.679505 GGTGGGGAGAAAAACTTGGC 59.320 55.000 0.00 0.00 0.00 4.52
3426 3683 2.080654 TGGTGGGGAGAAAAACTTGG 57.919 50.000 0.00 0.00 0.00 3.61
3427 3684 3.295973 TCTTGGTGGGGAGAAAAACTTG 58.704 45.455 0.00 0.00 0.00 3.16
3428 3685 3.680777 TCTTGGTGGGGAGAAAAACTT 57.319 42.857 0.00 0.00 0.00 2.66
3429 3686 3.117131 ACATCTTGGTGGGGAGAAAAACT 60.117 43.478 0.00 0.00 0.00 2.66
3430 3687 3.230976 ACATCTTGGTGGGGAGAAAAAC 58.769 45.455 0.00 0.00 0.00 2.43
3431 3688 3.611025 ACATCTTGGTGGGGAGAAAAA 57.389 42.857 0.00 0.00 0.00 1.94
3432 3689 3.230134 CAACATCTTGGTGGGGAGAAAA 58.770 45.455 0.00 0.00 29.70 2.29
3433 3690 2.875296 CAACATCTTGGTGGGGAGAAA 58.125 47.619 0.00 0.00 29.70 2.52
3434 3691 1.547675 GCAACATCTTGGTGGGGAGAA 60.548 52.381 0.00 0.00 35.13 2.87
3435 3692 0.038166 GCAACATCTTGGTGGGGAGA 59.962 55.000 0.00 0.00 35.13 3.71
3436 3693 0.038744 AGCAACATCTTGGTGGGGAG 59.961 55.000 0.00 0.00 35.13 4.30
3437 3694 0.038166 GAGCAACATCTTGGTGGGGA 59.962 55.000 0.00 0.00 38.25 4.81
3438 3695 1.308069 CGAGCAACATCTTGGTGGGG 61.308 60.000 0.00 0.00 38.25 4.96
3439 3696 1.308069 CCGAGCAACATCTTGGTGGG 61.308 60.000 0.00 0.00 44.29 4.61
3440 3697 0.606401 ACCGAGCAACATCTTGGTGG 60.606 55.000 2.08 0.00 46.50 4.61
3441 3698 2.932663 ACCGAGCAACATCTTGGTG 58.067 52.632 2.08 0.00 46.50 4.17
3443 3700 1.503542 GCACCGAGCAACATCTTGG 59.496 57.895 0.00 0.00 44.79 3.61
3453 3710 1.005340 CTTCTGAATCAGCACCGAGC 58.995 55.000 5.18 0.00 46.19 5.03
3454 3711 2.376808 ACTTCTGAATCAGCACCGAG 57.623 50.000 5.18 1.36 0.00 4.63
3455 3712 2.037121 TCAACTTCTGAATCAGCACCGA 59.963 45.455 5.18 0.00 0.00 4.69
3456 3713 2.414481 CTCAACTTCTGAATCAGCACCG 59.586 50.000 5.18 0.00 32.17 4.94
3457 3714 2.161211 GCTCAACTTCTGAATCAGCACC 59.839 50.000 5.18 0.00 32.17 5.01
3458 3715 2.159734 CGCTCAACTTCTGAATCAGCAC 60.160 50.000 5.18 0.00 32.17 4.40
3459 3716 2.071540 CGCTCAACTTCTGAATCAGCA 58.928 47.619 5.18 0.00 32.17 4.41
3460 3717 2.072298 ACGCTCAACTTCTGAATCAGC 58.928 47.619 5.18 0.00 32.17 4.26
3461 3718 3.320626 TGACGCTCAACTTCTGAATCAG 58.679 45.455 3.38 3.38 32.17 2.90
3462 3719 3.005791 TCTGACGCTCAACTTCTGAATCA 59.994 43.478 0.00 0.00 32.17 2.57
3463 3720 3.579709 TCTGACGCTCAACTTCTGAATC 58.420 45.455 0.00 0.00 32.17 2.52
3464 3721 3.667497 TCTGACGCTCAACTTCTGAAT 57.333 42.857 0.00 0.00 32.17 2.57
3465 3722 3.452755 TTCTGACGCTCAACTTCTGAA 57.547 42.857 0.00 0.00 33.82 3.02
3466 3723 3.667497 ATTCTGACGCTCAACTTCTGA 57.333 42.857 0.00 0.00 0.00 3.27
3467 3724 3.120408 CCAATTCTGACGCTCAACTTCTG 60.120 47.826 0.00 0.00 0.00 3.02
3468 3725 3.070018 CCAATTCTGACGCTCAACTTCT 58.930 45.455 0.00 0.00 0.00 2.85
3469 3726 2.808543 ACCAATTCTGACGCTCAACTTC 59.191 45.455 0.00 0.00 0.00 3.01
3470 3727 2.549754 CACCAATTCTGACGCTCAACTT 59.450 45.455 0.00 0.00 0.00 2.66
3471 3728 2.146342 CACCAATTCTGACGCTCAACT 58.854 47.619 0.00 0.00 0.00 3.16
3472 3729 1.197721 CCACCAATTCTGACGCTCAAC 59.802 52.381 0.00 0.00 0.00 3.18
3473 3730 1.202758 ACCACCAATTCTGACGCTCAA 60.203 47.619 0.00 0.00 0.00 3.02
3474 3731 0.396435 ACCACCAATTCTGACGCTCA 59.604 50.000 0.00 0.00 0.00 4.26
3475 3732 0.798776 CACCACCAATTCTGACGCTC 59.201 55.000 0.00 0.00 0.00 5.03
3476 3733 0.108585 ACACCACCAATTCTGACGCT 59.891 50.000 0.00 0.00 0.00 5.07
3477 3734 1.803334 TACACCACCAATTCTGACGC 58.197 50.000 0.00 0.00 0.00 5.19
3478 3735 3.364964 GCTTTACACCACCAATTCTGACG 60.365 47.826 0.00 0.00 0.00 4.35
3479 3736 3.568007 TGCTTTACACCACCAATTCTGAC 59.432 43.478 0.00 0.00 0.00 3.51
3480 3737 3.826524 TGCTTTACACCACCAATTCTGA 58.173 40.909 0.00 0.00 0.00 3.27
3481 3738 4.549458 CTTGCTTTACACCACCAATTCTG 58.451 43.478 0.00 0.00 0.00 3.02
3482 3739 3.005791 GCTTGCTTTACACCACCAATTCT 59.994 43.478 0.00 0.00 0.00 2.40
3483 3740 3.317150 GCTTGCTTTACACCACCAATTC 58.683 45.455 0.00 0.00 0.00 2.17
3484 3741 2.037121 GGCTTGCTTTACACCACCAATT 59.963 45.455 0.00 0.00 0.00 2.32
3485 3742 1.618343 GGCTTGCTTTACACCACCAAT 59.382 47.619 0.00 0.00 0.00 3.16
3486 3743 1.036707 GGCTTGCTTTACACCACCAA 58.963 50.000 0.00 0.00 0.00 3.67
3487 3744 0.106469 TGGCTTGCTTTACACCACCA 60.106 50.000 0.00 0.00 0.00 4.17
3488 3745 1.036707 TTGGCTTGCTTTACACCACC 58.963 50.000 0.00 0.00 0.00 4.61
3489 3746 2.880963 TTTGGCTTGCTTTACACCAC 57.119 45.000 0.00 0.00 0.00 4.16
3490 3747 4.414337 AAATTTGGCTTGCTTTACACCA 57.586 36.364 0.00 0.00 0.00 4.17
3491 3748 4.574421 ACAAAATTTGGCTTGCTTTACACC 59.426 37.500 10.71 0.00 34.12 4.16
3492 3749 5.293079 TCACAAAATTTGGCTTGCTTTACAC 59.707 36.000 10.71 0.00 34.12 2.90
3493 3750 5.423015 TCACAAAATTTGGCTTGCTTTACA 58.577 33.333 10.71 0.00 34.12 2.41
3494 3751 5.558844 GCTCACAAAATTTGGCTTGCTTTAC 60.559 40.000 10.71 0.00 34.12 2.01
3495 3752 4.511082 GCTCACAAAATTTGGCTTGCTTTA 59.489 37.500 10.71 0.00 34.12 1.85
3496 3753 3.313249 GCTCACAAAATTTGGCTTGCTTT 59.687 39.130 10.71 0.00 34.12 3.51
3497 3754 2.874086 GCTCACAAAATTTGGCTTGCTT 59.126 40.909 10.71 0.00 34.12 3.91
3498 3755 2.486918 GCTCACAAAATTTGGCTTGCT 58.513 42.857 10.71 0.00 34.12 3.91
3499 3756 1.532437 GGCTCACAAAATTTGGCTTGC 59.468 47.619 10.71 8.32 34.12 4.01
3500 3757 3.116079 AGGCTCACAAAATTTGGCTTG 57.884 42.857 10.71 0.00 34.12 4.01
3501 3758 3.843893 AAGGCTCACAAAATTTGGCTT 57.156 38.095 10.71 8.04 38.42 4.35
3502 3759 3.843893 AAAGGCTCACAAAATTTGGCT 57.156 38.095 10.71 0.00 35.02 4.75
3503 3760 3.548616 GCAAAAGGCTCACAAAATTTGGC 60.549 43.478 10.71 3.96 40.25 4.52
3504 3761 3.626670 TGCAAAAGGCTCACAAAATTTGG 59.373 39.130 10.71 0.00 45.15 3.28
3505 3762 4.333372 ACTGCAAAAGGCTCACAAAATTTG 59.667 37.500 3.89 3.89 45.15 2.32
3506 3763 4.516323 ACTGCAAAAGGCTCACAAAATTT 58.484 34.783 0.00 0.00 45.15 1.82
3507 3764 4.141233 ACTGCAAAAGGCTCACAAAATT 57.859 36.364 0.00 0.00 45.15 1.82
3508 3765 3.825143 ACTGCAAAAGGCTCACAAAAT 57.175 38.095 0.00 0.00 45.15 1.82
3509 3766 3.068024 CCTACTGCAAAAGGCTCACAAAA 59.932 43.478 1.24 0.00 45.15 2.44
3510 3767 2.622942 CCTACTGCAAAAGGCTCACAAA 59.377 45.455 1.24 0.00 45.15 2.83
3511 3768 2.158682 TCCTACTGCAAAAGGCTCACAA 60.159 45.455 8.81 0.00 45.15 3.33
3512 3769 1.419762 TCCTACTGCAAAAGGCTCACA 59.580 47.619 8.81 0.00 45.15 3.58
3513 3770 2.185004 TCCTACTGCAAAAGGCTCAC 57.815 50.000 8.81 0.00 45.15 3.51
3514 3771 2.305635 TGATCCTACTGCAAAAGGCTCA 59.694 45.455 13.75 13.75 45.15 4.26
3515 3772 2.991250 TGATCCTACTGCAAAAGGCTC 58.009 47.619 8.81 9.33 45.15 4.70
3516 3773 3.201708 AGATGATCCTACTGCAAAAGGCT 59.798 43.478 8.81 0.06 45.15 4.58
3517 3774 3.549794 AGATGATCCTACTGCAAAAGGC 58.450 45.455 8.81 0.00 45.13 4.35
3518 3775 7.337942 AGTTAAAGATGATCCTACTGCAAAAGG 59.662 37.037 7.55 7.55 0.00 3.11
3519 3776 8.273780 AGTTAAAGATGATCCTACTGCAAAAG 57.726 34.615 0.00 0.00 0.00 2.27
3520 3777 9.733556 TTAGTTAAAGATGATCCTACTGCAAAA 57.266 29.630 0.00 0.00 0.00 2.44
3521 3778 9.733556 TTTAGTTAAAGATGATCCTACTGCAAA 57.266 29.630 0.00 0.00 0.00 3.68
3522 3779 9.162764 GTTTAGTTAAAGATGATCCTACTGCAA 57.837 33.333 0.00 0.00 0.00 4.08
3523 3780 8.540388 AGTTTAGTTAAAGATGATCCTACTGCA 58.460 33.333 0.00 0.00 0.00 4.41
3524 3781 8.950208 AGTTTAGTTAAAGATGATCCTACTGC 57.050 34.615 0.00 0.00 0.00 4.40
3558 3815 8.977505 CGAGTGAAAATTGACAAAATTTACCAT 58.022 29.630 0.00 0.00 30.38 3.55
3559 3816 7.976734 ACGAGTGAAAATTGACAAAATTTACCA 59.023 29.630 0.00 0.00 30.38 3.25
3560 3817 8.347729 ACGAGTGAAAATTGACAAAATTTACC 57.652 30.769 0.00 0.00 30.38 2.85
3563 3820 9.753669 GAAAACGAGTGAAAATTGACAAAATTT 57.246 25.926 0.00 0.00 0.00 1.82
3564 3821 8.930760 TGAAAACGAGTGAAAATTGACAAAATT 58.069 25.926 0.00 0.00 0.00 1.82
3565 3822 8.379902 GTGAAAACGAGTGAAAATTGACAAAAT 58.620 29.630 0.00 0.00 0.00 1.82
3566 3823 7.148722 GGTGAAAACGAGTGAAAATTGACAAAA 60.149 33.333 0.00 0.00 0.00 2.44
3567 3824 6.309251 GGTGAAAACGAGTGAAAATTGACAAA 59.691 34.615 0.00 0.00 0.00 2.83
3568 3825 5.802956 GGTGAAAACGAGTGAAAATTGACAA 59.197 36.000 0.00 0.00 0.00 3.18
3569 3826 5.336744 GGTGAAAACGAGTGAAAATTGACA 58.663 37.500 0.00 0.00 0.00 3.58
3570 3827 4.738252 GGGTGAAAACGAGTGAAAATTGAC 59.262 41.667 0.00 0.00 0.00 3.18
3571 3828 4.642885 AGGGTGAAAACGAGTGAAAATTGA 59.357 37.500 0.00 0.00 0.00 2.57
3572 3829 4.932146 AGGGTGAAAACGAGTGAAAATTG 58.068 39.130 0.00 0.00 0.00 2.32
3573 3830 6.702716 TTAGGGTGAAAACGAGTGAAAATT 57.297 33.333 0.00 0.00 0.00 1.82
3574 3831 6.095720 TGTTTAGGGTGAAAACGAGTGAAAAT 59.904 34.615 0.00 0.00 39.23 1.82
3575 3832 5.415077 TGTTTAGGGTGAAAACGAGTGAAAA 59.585 36.000 0.00 0.00 39.23 2.29
3576 3833 4.942483 TGTTTAGGGTGAAAACGAGTGAAA 59.058 37.500 0.00 0.00 39.23 2.69
3577 3834 4.515361 TGTTTAGGGTGAAAACGAGTGAA 58.485 39.130 0.00 0.00 39.23 3.18
3578 3835 4.139859 TGTTTAGGGTGAAAACGAGTGA 57.860 40.909 0.00 0.00 39.23 3.41
3579 3836 5.008217 TGAATGTTTAGGGTGAAAACGAGTG 59.992 40.000 0.00 0.00 39.23 3.51
3580 3837 5.127491 TGAATGTTTAGGGTGAAAACGAGT 58.873 37.500 0.00 0.00 39.23 4.18
3581 3838 5.238650 ACTGAATGTTTAGGGTGAAAACGAG 59.761 40.000 0.00 0.00 39.23 4.18
3582 3839 5.127491 ACTGAATGTTTAGGGTGAAAACGA 58.873 37.500 0.00 0.00 39.23 3.85
3583 3840 5.432885 ACTGAATGTTTAGGGTGAAAACG 57.567 39.130 0.00 0.00 39.23 3.60
3596 3853 7.985184 TGCTACGAATCCTATAAACTGAATGTT 59.015 33.333 0.00 0.00 41.29 2.71
3597 3854 7.497595 TGCTACGAATCCTATAAACTGAATGT 58.502 34.615 0.00 0.00 0.00 2.71
3598 3855 7.946655 TGCTACGAATCCTATAAACTGAATG 57.053 36.000 0.00 0.00 0.00 2.67
3599 3856 8.958119 TTTGCTACGAATCCTATAAACTGAAT 57.042 30.769 0.00 0.00 0.00 2.57
3600 3857 8.255206 TCTTTGCTACGAATCCTATAAACTGAA 58.745 33.333 0.00 0.00 0.00 3.02
3601 3858 7.778083 TCTTTGCTACGAATCCTATAAACTGA 58.222 34.615 0.00 0.00 0.00 3.41
3602 3859 7.169982 CCTCTTTGCTACGAATCCTATAAACTG 59.830 40.741 0.00 0.00 0.00 3.16
3603 3860 7.147707 ACCTCTTTGCTACGAATCCTATAAACT 60.148 37.037 0.00 0.00 0.00 2.66
3604 3861 6.985059 ACCTCTTTGCTACGAATCCTATAAAC 59.015 38.462 0.00 0.00 0.00 2.01
3605 3862 7.120923 ACCTCTTTGCTACGAATCCTATAAA 57.879 36.000 0.00 0.00 0.00 1.40
3606 3863 6.726490 ACCTCTTTGCTACGAATCCTATAA 57.274 37.500 0.00 0.00 0.00 0.98
3607 3864 6.550108 AGAACCTCTTTGCTACGAATCCTATA 59.450 38.462 0.00 0.00 0.00 1.31
3608 3865 5.364157 AGAACCTCTTTGCTACGAATCCTAT 59.636 40.000 0.00 0.00 0.00 2.57
3609 3866 4.710375 AGAACCTCTTTGCTACGAATCCTA 59.290 41.667 0.00 0.00 0.00 2.94
3610 3867 3.515901 AGAACCTCTTTGCTACGAATCCT 59.484 43.478 0.00 0.00 0.00 3.24
3611 3868 3.863041 AGAACCTCTTTGCTACGAATCC 58.137 45.455 0.00 0.00 0.00 3.01
3612 3869 4.749976 AGAGAACCTCTTTGCTACGAATC 58.250 43.478 0.00 0.00 37.60 2.52
3613 3870 4.220821 TGAGAGAACCTCTTTGCTACGAAT 59.779 41.667 0.00 0.00 41.35 3.34
3614 3871 3.572682 TGAGAGAACCTCTTTGCTACGAA 59.427 43.478 0.00 0.00 41.35 3.85
3615 3872 3.154710 TGAGAGAACCTCTTTGCTACGA 58.845 45.455 0.00 0.00 41.35 3.43
3616 3873 3.577649 TGAGAGAACCTCTTTGCTACG 57.422 47.619 0.00 0.00 41.35 3.51
3617 3874 4.081420 TCCATGAGAGAACCTCTTTGCTAC 60.081 45.833 0.00 0.00 41.35 3.58
3618 3875 4.096681 TCCATGAGAGAACCTCTTTGCTA 58.903 43.478 0.00 0.00 41.35 3.49
3619 3876 2.909006 TCCATGAGAGAACCTCTTTGCT 59.091 45.455 0.00 0.00 41.35 3.91
3620 3877 3.340814 TCCATGAGAGAACCTCTTTGC 57.659 47.619 0.00 0.00 41.35 3.68
3621 3878 7.108847 ACTATTTCCATGAGAGAACCTCTTTG 58.891 38.462 0.00 0.62 41.35 2.77
3622 3879 7.181845 AGACTATTTCCATGAGAGAACCTCTTT 59.818 37.037 0.00 0.00 41.35 2.52
3623 3880 6.671779 AGACTATTTCCATGAGAGAACCTCTT 59.328 38.462 0.00 0.00 41.35 2.85
3624 3881 6.201591 AGACTATTTCCATGAGAGAACCTCT 58.798 40.000 0.00 0.00 44.28 3.69
3625 3882 6.097554 TGAGACTATTTCCATGAGAGAACCTC 59.902 42.308 0.00 0.00 42.30 3.85
3626 3883 5.960811 TGAGACTATTTCCATGAGAGAACCT 59.039 40.000 0.00 0.00 0.00 3.50
3627 3884 6.227298 TGAGACTATTTCCATGAGAGAACC 57.773 41.667 0.00 0.00 0.00 3.62
3628 3885 7.725251 AGATGAGACTATTTCCATGAGAGAAC 58.275 38.462 0.00 0.00 0.00 3.01
3629 3886 7.784073 AGAGATGAGACTATTTCCATGAGAGAA 59.216 37.037 0.00 0.00 0.00 2.87
3630 3887 7.296856 AGAGATGAGACTATTTCCATGAGAGA 58.703 38.462 0.00 0.00 0.00 3.10
3631 3888 7.528996 AGAGATGAGACTATTTCCATGAGAG 57.471 40.000 0.00 0.00 0.00 3.20
3632 3889 7.562821 TGAAGAGATGAGACTATTTCCATGAGA 59.437 37.037 0.00 0.00 0.00 3.27
3633 3890 7.724287 TGAAGAGATGAGACTATTTCCATGAG 58.276 38.462 0.00 0.00 0.00 2.90
3634 3891 7.666063 TGAAGAGATGAGACTATTTCCATGA 57.334 36.000 0.00 0.00 0.00 3.07
3635 3892 7.986320 AGTTGAAGAGATGAGACTATTTCCATG 59.014 37.037 0.00 0.00 0.00 3.66
3636 3893 7.986320 CAGTTGAAGAGATGAGACTATTTCCAT 59.014 37.037 0.00 0.00 0.00 3.41
3637 3894 7.038729 ACAGTTGAAGAGATGAGACTATTTCCA 60.039 37.037 0.00 0.00 0.00 3.53
3638 3895 7.277539 CACAGTTGAAGAGATGAGACTATTTCC 59.722 40.741 0.00 0.00 0.00 3.13
3639 3896 7.201513 GCACAGTTGAAGAGATGAGACTATTTC 60.202 40.741 0.00 0.00 0.00 2.17
3640 3897 6.593382 GCACAGTTGAAGAGATGAGACTATTT 59.407 38.462 0.00 0.00 0.00 1.40
3641 3898 6.105333 GCACAGTTGAAGAGATGAGACTATT 58.895 40.000 0.00 0.00 0.00 1.73
3642 3899 5.186603 TGCACAGTTGAAGAGATGAGACTAT 59.813 40.000 0.00 0.00 0.00 2.12
3643 3900 4.524328 TGCACAGTTGAAGAGATGAGACTA 59.476 41.667 0.00 0.00 0.00 2.59
3644 3901 3.323115 TGCACAGTTGAAGAGATGAGACT 59.677 43.478 0.00 0.00 0.00 3.24
3645 3902 3.657634 TGCACAGTTGAAGAGATGAGAC 58.342 45.455 0.00 0.00 0.00 3.36
3646 3903 3.323115 ACTGCACAGTTGAAGAGATGAGA 59.677 43.478 0.00 0.00 38.83 3.27
3647 3904 3.432592 CACTGCACAGTTGAAGAGATGAG 59.567 47.826 0.00 0.00 40.20 2.90
3648 3905 3.396560 CACTGCACAGTTGAAGAGATGA 58.603 45.455 0.00 0.00 40.20 2.92
3649 3906 2.095869 GCACTGCACAGTTGAAGAGATG 60.096 50.000 0.00 0.00 40.20 2.90
3650 3907 2.149578 GCACTGCACAGTTGAAGAGAT 58.850 47.619 0.00 0.00 40.20 2.75
3651 3908 1.134431 TGCACTGCACAGTTGAAGAGA 60.134 47.619 0.00 0.00 40.20 3.10
3652 3909 1.302366 TGCACTGCACAGTTGAAGAG 58.698 50.000 0.00 0.00 40.20 2.85
3653 3910 1.748950 TTGCACTGCACAGTTGAAGA 58.251 45.000 2.26 0.00 40.20 2.87
3654 3911 2.565210 TTTGCACTGCACAGTTGAAG 57.435 45.000 2.26 0.00 40.20 3.02
3655 3912 3.523606 ATTTTGCACTGCACAGTTGAA 57.476 38.095 2.26 0.00 40.20 2.69
3656 3913 3.523606 AATTTTGCACTGCACAGTTGA 57.476 38.095 2.26 0.00 40.20 3.18
3657 3914 3.371591 ACAAATTTTGCACTGCACAGTTG 59.628 39.130 16.01 16.01 40.20 3.16
3658 3915 3.371591 CACAAATTTTGCACTGCACAGTT 59.628 39.130 2.26 0.00 40.20 3.16
3659 3916 2.931325 CACAAATTTTGCACTGCACAGT 59.069 40.909 2.26 0.00 43.61 3.55
3660 3917 2.931325 ACACAAATTTTGCACTGCACAG 59.069 40.909 2.26 0.00 38.71 3.66
3661 3918 2.969990 ACACAAATTTTGCACTGCACA 58.030 38.095 2.26 0.00 38.71 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.