>input_sequence_45467
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ATGGGGTACCTG
CAGGAGGCCAGGGAGAATCACGTCAAGAAGAAGGTCGAGGAAGGTGAGTCAAACGCCCACGCTTCTAGTTCTTCGCGATT
TGGAATATTGAGAAATGCAGAGCTCGTCCTGGTTCTCTAGCAGATGTGTAATCGGGAAGTGCGTGAACTCCGCTGGCGTT
TCCTCTTGAAATCGCTACGCAATCTGAGCGGAATCATGCGTCATGGTGGCGGTAGCGGTAGCTGGCTGGTTGCAGTTTCA
GCGAACCAGGGAGGCTCTGGCTATGAATCTTATTTAAGGGAGGCGTTGTTACGCGTAGTGGTAGTGGTAGTTGGCTGCTT
GAAGTGGTCTGCAGAAAGCTGGATCGATGTTTCTAGCTCATGTTATTTATGTATTTAGCATGAAATTTGGGAACCCTGTT
CTGGTAGAATCTGCTAGTGGTTCACCGCAATGAGAAATTTTGAGAACGTTTTAATGTA--TCATTTAAAGGTTCTCGT--
-------TCTGAAAGGGCTAATTTTGCCCATTTTGTTTCGCCTTTCAGCTTTGCGCAGCAAAATGAAACAAAAGGCCCTC
AAGGAATGTGATGTACTGTGTTCAAAATACGCTGAATGTGCTCGAGGAAGAACTTTCTCTGTGGTTTGGACATGCCGCAA
GCAAGCCAAAGAGTTGAATAACTGTCTTCATCAATTGTAAGTGACCATTATATGTCTGTTATAAACTTTTGTTTTTGGAC
AAATCTTGCAAGTTGTATCTTCATTCTTGTTTAAACCTCATTTGTTATGGTAGAGTCTCACTCGTGCAAATAGAAAATAT
CAGCTTTGAAGACCCCAATATTGCTCCGTCCGAATAAATAGAAACATTGTGCTTGTAGATTGATCACAGAAACTAATAAG
CTGGCTTTTATTCGTCATTCAGCAGAAGAAGAATGTTAAAAATATCTATATATTGTACAGACAATCAGACAATGTGAATA
AGTCTGATAAATTAGTTCATGCCTGTGAGTTTCTCATGATTATAACAGCTCATATACTACGTAGACACTAGATTTTTCCA
TCACCGACAAAAGTATATCT-CTTTTACATTTAAGTCCTTCATATGGCGTAGTTCTGACCATCGATTTGGGTTTAGAAGC
TGTCTTG-TTGACAGCTGTTGCTGTTTTTGACAAAACTGTCTTTGAAAGTAGCACCAGCTTCATTTGGAATTTTATAGAG
CCAAGTTCTCTGTAGGTTTTGATTTATAGTCCGAAATTCTGACCCTGCCAGGAACTTGTGCCGGTTCTTGGGAGTGGTGC
CTGAACAGAGTGTAAAACCATTGGACAAGATCACAGAATATGATGTACTTGTCACCAAATGGT-AACTTTCCATTTGAGG
AACCTAGTGCTGAAACATGTTTGATGATCAATGCATTTGCCTGAATTTTGAGAAGTGTATTTATGCTATTAGTTCTGACC
ACATTATGCCTGAATCTTGA--------------------------------------------------------GAAT
TTGGTTCCACGTGATTGGAATGTGCTTACAATTAC----TTTTTGCCTCTATCCTCGAAGTGGCATGTTGCATTGTCCGA
GTAGACTAATATTGGCATGGCAGATACCTCTTTCAT-GTAATTCATCATGCGCTTTTGTATGTTGGCAGCACCAATGATG
CAATACTGGAAGATATGAAGAAGGCTTACATGGCCGAGGAAGAGAGCAAGGAGAAGAACAAATAA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr4B_1_TraesCS4B01G219100
ACAGTAAGTTTTCTTTAGGGGTTGAAAAAACAGTAACGCTTTGTTTGGATGTTTGCATTGGGAGGCTTGGCATTGCATTG
GGTTGAATACCAATATCACAGGATATTGGTATTGAAATTGAATGCTAATATTTCTGTTTGGATGTTTAGGTATTCAGAAC
GCAGACTTGATATTGAGGTTGAATGTCAAATGT--------TGGTCAAAATGAGGAATTGAGTTGCAAGAGACTTTGATT
TTTATGTTTAACATCCGAATATAGGTCAAAGTGAGGAATAGCGCGGGACCGAGGGCAAGAGAGCCATGGGGGTAAGTGCC
ATGGCAGCAGAAGGACGCAACAGGCTCCACGGGGTGCCGACAGTGTTGGGCGAGGGGCGGCGGCACGGTCGGCATGAGTG
GCACGAGCCACGAGGCAGAGGTCGCCATGGGGTGCTAGTCGTGCTGGGCGAGCCACCAGGGAGAGATGGGGGCG------
--------------------------------------------------------------------------------
----------CCGACGTCCAACTC-GCAGCTAGCCGCTTCTAGTCT--CTACCAGCCGAATCAATTTTTTAGGGCCGAAG
TGGGATGCAACATGCGGGGGAAGCGAACTGTGCGAATACCAAGCAAAACCGAGGAGTAAAGCTCCGAATTGGAGACTAGG
TCGTGCAAGTGTTGCGGTGGGGCATCGAATATTGGGATTCAATCCCAAGCGCGAATGCCATGGCCTGCCAAACAGCGGTA
TTCGGCTACCCGAATGCCAAAGTCTAATTCTCGCTCTCAATGCCAACATCCAAACGCAGTGTAAGTGGACGGGCCTGATC
TGGTTTGGGCTTTGTGGAACCTACCCCAACAACCCAGCCAAAAGCCCTTG-CCCCGAATCTCTTCCACGTTCTCCCTTCC
GCGACCAAAGAAAGGGGAAAACCGATAGGAAACCTTCCTGTCAATGGCCGCCTCCCCTTCCAAGGGCGTTAGGGTTTAAC
TCCAACTTCTCCTAGATCTCTCTCACCGCCCCTCTCCTCGATCAGGTACTGCAGCACCTGGTAGCCTCATGGGGTACCTG
CAGGAGGCCAGGGAGAATCACGTCAAGAAGAAGGTCGAGGAAGGTGAGTCAAACGCCCACGCTTCTAGTTCTTCGCGATT
TGGAATATTGAGAAATGCAGAGCTCGTCCTGGTTCTCTAGCAGATGTGTAATCGGGAAGTGCGTGAACTCCGCTGGCGTT
TCCTCTTGAAATCGCTACGCAATCTGAGCGGAATCATGCGTCATGGTGGCGGTAGCGGTAGCTGGCTGGTTGCAGTTTCA
GCGAACCAGGGAGGCTCTGGCTATGAATCTTATTTAAGGGAGGCGTTGTTACGCGTAGTGGTAGTGGTAGTTGGCTGCTT
GAAGTGGTCTGCAGAAAGCTGGATCGATGTTTCTAGCTCATGTTATTTATGTATTTAGCATGAAATTTGGGAACCCTGTT
CTGGTAGAATCTGCTAGTGGTTCACCGCAATGAGAAATTTTGAGAACGTTTTAATGTA--TCATTTAAAGGTTCTCGT--
-------TCTGAAAGGGCTAATTTTGCCCATTTTGTTTCGCCTTTCAGCTTTGCGCAGCAAAATGAAACAAAAGGCCCTC
AAGGAATGTGATGTACTGTGTTCAAAATACGCTGAATGTGCTCGAGGAAGAACTTTCTCTGTGGTTTGGACATGCCGCAA
GCAAGCCAAAGAGTTGAATAACTGTCTTCATCAATTGTAAGTGACCATTATATGTCTGTTATAAACTTTTGTTTTTGGAC
AAATCTTGCAAGTTGTATCTTCATTCTTGTTTAAACCTCATTTGTTATGGTAGAGTCTCACTCGTGCAAATAGAAAATAT
CAGCTTTGAAGACCCCAATATTGCTCCGTCCGAATAAATAGAAACATTGTGCTTGTAGATTGATCACAGAAACTAATAAG
CTGGCTTTTATTCGTCATTCAGCAGAAGAAGAATGTTAAAAATATCTATATATTGTACAGACAATCAGACAATGTGAATA
AGTCTGATAAATTAGTTCATGCCTGTGAGTTTCTCATGATTATAACAGCTCATATACTACGTAGACACTAGATTTTTCCA
TCACCGACAAAAGTATATCT-CTTTTACATTTAAGTCCTTCATATGGCGTAGTTCTGACCATCGATTTGGGTTTAGAAGC
TGTCTTG-TTGACAGCTGTTGCTGTTTTTGACAAAACTGTCTTTGAAAGTAGCACCAGCTTCATTTGGAATTTTATAGAG
CCAAGTTCTCTGTAGGTTTTGATTTATAGTCCGAAATTCTGACCCTGCCAGGAACTTGTGCCGGTTCTTGGGAGTGGTGC
CTGAACAGAGTGTAAAACCATTGGACAAGATCACAGAATATGATGTACTTGTCACCAAATGGT-AACTTTCCATTTGAGG
AACCTAGTGCTGAAACATGTTTGATGATCAATGCATTTGCCTGAATTTTGAGAAGTGTATTTATGCTATTAGTTCTGACC
ACATTATGCCTGAATCTTGA--------------------------------------------------------GAAT
TTGGTTCCACGTGATTGGAATGTGCTTACAATTAC----TTTTTGCCTCTATCCTCGAAGTGGCATGTTGCATTGTCCGA
GTAGACTAATATTGGCATGGCAGATACCTCTTTCAT-GTAATTCATCATGCGCTTTTGTATGTTGGCAGCACCAATGATG
CAATACTGGAAGATATGAAGAAGGCTTACATGGCCGAGGAAGAGAGCAAGGAGAAGAACAAATAATCTTTATGCA-----
-------------------TCCATGCCTGTATGTACACTGCTGCTTTTGGAATTTGGCAGTTGCTTACTGGTTATCTTAG
TTGATTGATGCTGAATTCCTAGAGACCTTTTGTGAACATTTGGGTTTGTCCAGATGCATAACCTGGTATGATCTCAAGGA
ATCCATGTATTA-TTTTATTGACTTGCAAGTTGTGTCTGATAGCATTATCCTCCAATAACTTGTTTAGCTGACCAAAGTG
TTCAGTTTGGCCTCCAGAAGGTAATTAAGTACTGAATCATTCACGAAAAATACATTTTCT-CTTTGCGCTAAAAAACTGG
CGACTTCTCTATTTTTTAGCCCAAAGCT--TAAAAACATAATGCCAGAAAGTTGCCCTTGGTTTCTGTT-----------
--------------------------AATATGCAATATACTATACCTTCTGGATGCACTCGGTTGTTCAGTGTTTTTCCT
TCTCTTTTTGACAAAG-CTGGCCCTCTTTTGAATGTTTAGCCA-AAAATGGCCCTAGTCCGAAACTTTAATCAAACATAG
CTCTTTTACTCAACGTGACCCATTCCATCGCTAAACTTGGCTAGGTCAGCAACAGGCATCTTGATTCCGAGAAAAACTTG
GCGGTATCGCAAAC-----AATGATGATTTGGGGTCAAGTCCAAGGACCTTGGAGCTGACTTATTTTCCATTCTAGGCAG
TAGCTTTGGTGCTGAGCTCCC-AAACTGAGCGTCACAGTCAGAAGCTTTGATCCTCGAATTGCTGTTTCCTTCGCAGAAT
CGCCAAGTTTTTCTCCCCACCAAGATGTTGCTCGGTGCTGATTCAGAAGTTGAGCGTCAGAATTGGTGGTGTAAAGCAAG
CCAAATTTTGTGAGCCTTTTGCAGTAGGATCATCTTTAACTAAACTTTTAGAAAATGGTAAATTTTGTCAATTTTCACTC
GTTTTCACCCTAAACATTCAGTTTATAGGATTCGTAGCAAAGAGGTTCTCTCATGGAAATAGTCTCATCTCTTCAACTGT
GCAGTGCAAAATTTGTGT
>chr1B_38
-------------------------------------GCTCTGTTTGGATGTTTGCATTGGGAGGGTTGGCATT-CATTG
GGTTGAATACCAATATCACAGG-TATTGGTATTGAGATTGAATGCCAATATTTATGTTTGGATGTTTAGGTATTCAGAAG
GCATACTTGAT--TGTGGTTGAAAGCCAAATGTTATTTGGATGGTCAAAGTGAGGAATTAAGTTGCAAGAGACTTTGATT
TTTATGTTTAACATCTGTATATA-GTCAAAGTGAGGAACAGCACGGGAT-----GCAGGAGAGACATGAGGGTGAGCGCC
ATGGGAGCTGATGGATGCAACAGGCTCCACGGGGTGTCGGCGGTGGTGGGCGAGGGTGGTT-GCACGGTCGCAATGAGTG
GCACGAG-------GCAGCGGTCGTCATGGGATGCTGGCCGAGCTGT---------CAGGGAGAGATGGGGGCGGCGCTG
ACCCGCGATGGGAGGGAGAAAAGCGGGGGATGGGCGGATGCTCATCGGAGAGATGCGGGGAGGAGGAGGACGATCAGGAC
CTGGCCTGCGCCGTCGTCCAACTCCGCAGCGCGCCGCTTCTAGTCT--CCACTGGCTGAATCAAATTTTCAGGGCCGAAG
TGGTATGCGACATGCGGGGGGAGCGAGCTGGCTGAATACCAAGCAAAACCGAGGGGTGAAGCTCCGAATTGGAGACTGGG
TCGTGCAAGTGTTGCCGCGGGGCATCGAATATTGGGATTCAATGCCAAACGTGAATGCCATGGCCTGCCAAACAGCGGTA
TTCGGCTACCCGAGTGCCAAAGTCTAATTCTCGTTCTCAATGTCAACATCCAAACGCAGCGTTAGTG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr7B_67
TTT------------------------------------------------------------------GCATTGCATTG
GGTTGAATACCAATATCACAGGATATTGGTATTGAAATTGAATGCTAATATTTCTGTTTGGATGTTTAGGTATTCAGAAC
GCAGACTTGATATTGAGGTTGAATGTCAAATGT--------TGGTCAAAATGAGGAATTGAGTTGCAAGAGACTTTGATT
TTTATGTTTAACATCCGAATATAGGTCAAAGTGAGGAATAGCGCGGGACCGAGGGCAAGAGAGCCATGGGGGTAAGTGCC
ATGGCAGCAGAAGGACGCAACAGGCTCCACGGGGTGCCGACAGTGTTGGGCGAGGGGCGGCGGCACGGTCGGCATGAGTG
GCACGAGCCACGAGGCAGAGGTCGCCATGGGGTGCTAGTCGTGCTGGGCGAGCCACCAGGGAGAGATGGGGGCG------
--------------------------------------------------------------------------------
----------CCGACGTCCAACTC-GCAGCTAGCCGCTTCTAGTCTCTCTACCAGCCGAATCAATTTTTTAGGGCCGAAG
TGGGATGCGACATGCGGGGGGAGCGAACTGTGCGAATACCAAGCAAAACCGAGGGGTAGAGCTCCGAATTGGAGACTGGG
TCGTGCAAGTGTTGCGGTGGGGCATCGAATATTGGGATTCAATCCCAAGCGCGAATGCCATGGCCTGCCAAACAGCGGTA
TTCGGCTACCCGGATGCCAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr4A_754
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GTAAGTAGACGGGCCGGATC
TTAGTTGGGCTGTGTGGAACCAACCCCAACAGCCCA----AAAGCCCTTGCCCCCGAATCTCTTCCACGTTGTCCCTTCG
GCCACCAAAGAAAGGGGAAACCCGATAGGAAACCTCCCTGTCAATGGCCGCCTCCCCTTCCAAGGGCATTAGGGTTTAAC
TCCAACTTCTCCTAGATCTCCCTCACCGCCCCTCTCCACGATCAGGCACCGCAGCACCTGGTAGCCTCATGGGGTACCTG
CAGGAGGCCAGGGAGAATCACGTGAAGAAGAAGGTCGAGGAAGGTGAGTCAAACCCCCAAGCTTCCAATTCTTGGCGATT
CGGAATATTGAGAAATGCAGAGCTCGTCCTTGTTCTCCAGCAGATGCGAAATCGGGCAGTGCGTGAACTCCGCGGGCGTT
TCCTCTTGAAATCACAACGCAATCTGAGCAGAATAATGCGTA------GCGGTAGCGGTAGTTGGCTGGTTGCAGTTTCA
CCGAACCAGGGAGGCTCTGGCTATGAATCTTATTTAAGGGAGGCGTTGTTGTGCGTAGTGGTAGTGGTAGTTGGCTGGTT
GAAGTGGTCTGCAGAAAGCTGAATTGATGTTACTAGCTCGTGTTATTACGTGTT----TATGAAATTTGGGAACTCTGTT
CTGGTAGAATCTGCTAGTGGTTCACCGGAATGAGAAATTGTGGGCATGTTTTAAAGTATGTCAGTTAAAGGTTCTCGTTC
TTGTTTATCTGAAAGAGCTAGTTTTGCCCATTGTGTTTCTCTTTTCAGCTTTGCGCAGCAAAATGAAACAAAAGGCCCTC
AAGGAATGTGATGTGCTGTGTTCAAAATATGCCGAATGTGCTCGAGGAAGAACTTTCTCTGTGGTTTGGACATGCCGCAA
GCAAGCCAAAGAGTTGAATAACTGTCTTCATCAATTGTAAGTGACCATTATATGTCTGTTATAAACTTCTGTTTTTGGAC
AAATCTTGCAAGTTATATCTTGATTCTTGTTTAAACCTCATTTGTTAAGGTAGAGTCTCACTCGTGCAAATAGAAAATTA
AAGCTTTGAAGACCCCGATATTGCTCCTTAAGTATAAATAGAAACATTGTGCTTGTGGATTAATCACCGAAACTAATAAG
CTGGCCTTTATTCGTCATTCAGCAGAATTATAATGTTAAAGATATCTATATATTGTACAGACAATGAGGCAATGTGGATA
CGTCTGATAAATTAGTTCATGCCTGTGAGTTTCTCATGATTCTAACACCTCATATACTACGTAGACGCTAGATTTTTC-A
TTACTGACAGAACTATGTCTCCTTTTATATGCAAGTCCTTCATATGGTGTACTTCTGGTAATCGATTTGGGTTTAGAAGC
TGTCTTG-TTGACAGCTGTTGCTGTTATTGACAAAATTGTCTTTGACAGTAGCACCAGGTTCATTTGGAATTTTATAGAG
CCAAGTTTGCTGTAGGCTTTGATTTGTAGTCCGAAGTTCTGACCGTGCCATGAACTTGCGCCAGTTCTTGAGAGCAGCGC
CTGGACAGAGTGTAAAACCATTGGACAAGATCAAAGAATATGATCTACTTGTCACCAATGGTAG---TTTTCATTTGAGG
AACCTACTGCTGAAACATGTTTGATGATCAGTGCATTTGCCTGAATCTTGAGAAGTGCATTTATGCTATTAATTCTGACC
ACATGGCGTCTCTG-----------------TCGAAGTGACAATCATAACCAAAATCTGTTATGAGCTGTGCCATGGAAT
TTGGTTCCACCTAATTGGAAGGTGGTTACCATTACCT--TTTTTTTCTCTATCCTTGAAGTGGCATGTTGCAT-------
----ACTAGCATTGGCGT---AGACACCTCATTCGTTGTAATTC-CCACGCGCTTTTGTATGTTGGCAGCACCAATGATG
CAATACTGGAAGATATGAAGAAGGCTTACATGGATGGGCAAGAGAGCAAGGAGAAGAACAAATAATCTTTATGCACGGAT
AAATGGAAAGCCATGGTTCTCCATGCCTGTACGTACA---------CTGGAATTTGGCAGTTGCTTACTGGTTATCTTAG
TTGATTGATGCTGAATTCCTAGAGACCTTTTGTGAACATTTGGGTTTGTCCAGATGCATAACCTGGTATGATCTCAAGGA
ATCCATGTAGTACTTTTATCGACTTGCAAGTTGTGCTAGATAGCATTATCCTCCAATAACTGGTTTAGCTGGCCAAAGTT
TTCAGTTTAACCTCCAAAAGGTAATTAAGTACTGAATCATTCACGAAAATACATTTTCAAGCTTTGGTCCAAAAAACAGA
GAAGTCGCCAGTTTTGTTCAACCGTCACTGTAAAAACATAATGCCAGAAAGTTGTCTTTTCTTTCTTTCTTTTTCTTTTT
TTGCGAAACGCCTTGTGTTTCTGTTGAATATGCAATATACTGTACCTTCTGGATGCACTCGGTTGTTCAGTGTTTTCCTT
GTTCTTTTTGACAAAACCTGACCCTCTTTTGAATGTTTAACCG-AAAATGACCCTTGTCTGAAGCTTTAACCAAATATAG
CTCTATTGGTCAATATAACTCATTCCAGCGCTAAACTTGGCTAGATCAGCAACAGGCATCTTGGTTTTGAGAAAAACTTG
GCGACATCGCAAAAAAAAAAATGACGATTTGGGTTCAACTCCAACGACCTTGGAGCTGACCTATTTTCCATTCTGGGCAG
TAGCTTTCGTGCTGAGCTCTCAAAGCTGAGCGTCAGAGTAAGTAGCTCTGA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr4D_754
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GTAAGTGGACGGGCCCGATC
T-AGTTGGGCTTTGCGGAACCTACCCCAACAGCCCA----AAAGCCCTTG-CGCCGAATCTCTTCCACGTTCTCCCTTCG
GCGACCAAAGAAAGGGAAAATCCGATAGGAAACCTTCCTGTCAATGGCCGCCTCCCCTTCCAAGGGCGTTAGGGTTTAAC
TCCAACTTCTCCTAGATCTCTCTCACCGCCCCTCTCCACGATCAGGCACCGCAGTACCTGGCAGCCTCATGGGGTACCTG
CAGGAGGCCAGGGAGAATCACGTCAAGAAGAAGGTCGAGGAAGGTGAGTCTAACGCCCACGCTTCTAGTTCTTCGCGATT
CGGAATATTGAGAAATGCAGAGCTCGTCCTGGTTCTCCAGCAGATGTGAAATCGGGAAGTGCGTGAACTCCGCTGGCGTT
TCCTCTTGAAATCGCTACGCAATCTGAGCGGAATAGTGCGTAATGGCGGCGGTCGCGGTAGTTGGCTGGTTGCAGTTTCA
CCGAACCAGGGAGGCTCTGGCTATCAATCTTGTTTAAGGGAGGCGTTGTTATGCGTAGTGGCAGTGGTAGTTGGCTGGTT
GAAGTGTTCTGCAGAAAGCTGAATTGATGTTACTAGCTCATGTTATTTATGTATTTAGTATGAAATTTGGGAACCCTGTT
CTGGTAGAATCAGCTAGTGGTTCCCCGGAATGAGAAATTCTGGGCATGTTTTAAAGTACATCATTTGAAGGTTCTCGT--
-------TCTGAAAGGGCTAATTTTGCCCATTTTGTTTCACTTTTCAGCTTTGCGCAGCAAAATGAAACAAAAGGCCCTC
AAGGAATGTGATGTGCTGTGTTCAAAATATGCCGAATGTGCTCGAGGAAGAACTTTCTCTGTGGTTTGGACATGCCGCAA
GCAAGCCAAAGAGTTGAATAACTGTCTTCATCAATTGTAAGTGACCATTATATGTCTGTTATAAACTTCTGTTTTTGGAC
AAATCTTGCAAGTTATATCTTGATTCTTGTTT------------------------------------------------
------TGAAGACCCCAATATTGCTCCTTAAGAATAAATAGAAACATTGTGCTTGTAGATTAATCACAGAAGATAATAAG
CTGGCTTTTGTTCATCATTCAGCAGGAGAATAATGTTAAAGATATCTATATATTGTACAGACAACGAGACAAT-------
--------------GTTCATGCCTGTGAGTTTCTCATGATTCTAACAGCTCATATACCATGTAGACACTAGATTTTTCTG
TTACCGACAAAAGTACGTCTCCTTTTATAT-CAAGTCCTTCATATGGCGTAGTTCTGGTCATCAAGTTGGGTTTAAAAGC
TGTCTTTCTTGACAGCTGTTGCTGTTTTTGACAAAATTATCTTTGACAGTAGCACCAGG-TCATTTGGAATATTATAGAG
CCAAGTTCACTGTAGGTTTTGATTTATAGTCTGAAGTTCTGACCCTGCCAAGAAATTTTGCTGGTTCTTGAGAACGGCGC
CTCAGCACAGTGTAAAACCGTTGGACAAGATCAAACAATATGATGTACTTGTCATCAAATGGTGAACTTTCCATTTGAGG
AACCTAGTGCTGAAACATGTTTGATGATCAGTGCATTTGCCTGAATCTTGAGAAGTGCATTTATGCTATTAATTCTGACC
ACATTGCGTCTCTTTCTAAGGAGTACTCCTTTCTAAGTGACAATCATTACCGAAATCTGTTATGGGCTGAGCCATGGTAT
TTGGTTCCACCTGATTGGAAGGTGGTTAACCATTACCTTTTTTTTTCTCTATCCTTGAAGTGGCATGTTGCAT-------
----ACTAACATTGGCATGACAGACACCTCATTCATTGTAATTCACCACGCGCTTTTGTATGTTGGCAGCACCAATGACG
CAATACTGGAAGATATGAAGAAGGCTTACATGGATGAGCAAGAGAGCAAGGAGAAGAACAAATAATCTTTATGCACGGAT
AAATTGAAAGTCATGGTTCTCCATGCCTGTACGTACACTGCTGCTTCTGGAATTTGGCAGTTGCTTACTGGTTATCTTGC
TTGATTGATGCTGAATTCCTATAGACCTTTTGTGAACATTTGGGTTTGTCCGGATGCATAACCCGGTATGATCTCAAGGA
ATCCATGTAGTACTTTTTTTGGCTTGCAAGTTGTGCCTGATAGCATTATCTTCCAATAACTGGTTTAGCTGGCCAAAGTG
TTCAGTTTAACCTCAAAAACGTAATTAACTACTGAATCATCCACGAAAATACATTTTCAAGCTTTGGGCTAAAAAACAGA
TAGGTCGCCAGTTTCGTTCAACCGTCACTGTAAAAACATAATGCCAGAAAGTTGCCTTGTGTTTCTGTTGAAT-------
---------------------------ATATGCAATACACTCTACTTTCCGGATGCACTTGGTTGTTCAGTGTTTTCCTT
ATTCTTTTTGA---------------------ATGTTTAGCCAAAAAATGACCCTAGTCTGAAACTTTAATCAAATATAG
CTGTTG--CTCAATGTGACCCATTCCAGCGCTAAACGT--CTAGATCAGCAACAGGCATCTTGGTTTTGTGAAAAACCTG
GTGATATGGC---AAACAAAATGACAATTTGGGGTCAACT--AAGGACCTTGGAGCTG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------S---------------------------------S----------------------S--
--------------------------------------------------------------------------------
---------------------------------S--------S----------------S---------------S----
-SSS---------------------------S----SSSS---------------------------------------S
--------------------S-----------------------------------------------------------
-------------------------------------S--------S--S------------------------------
--------------------------------------------------------------------------------
S------------------------------------S----------S-------------------------------
----------------------------------S------S----S--------------S------------------
S--------------------------------------------------S-------------------------S--
---------------------S--S------S--------------------------S---------------------
---------------------------S-----------S--S-S-S-------S-------------------------
---------------------------------------S-S--------------------------------------
--------------S--------------S--S-----------------------------------------------
--------------------------------------------------------------------S-----------
--------------S------S-------------------------S------------------------------SS
S--------------------------S-SS------------------------------S------------------
------------------------------S---------S------------------------S----------S---
S----------------------------------------S------------------------------------S-
-S--------------S----------S--SS-------------------------SS---------------------
------------------------------------S---------S-----------S---------------------
--------S--------------------------S--------------S-------------------S---S--S--
---------------------------------S----------------------------------------------
------------------------------S---------------S----------S-------------S--------
-----SS-S--SSS---SSS------------------------------------------------------------
----------S---------S---S----S--------------SS---------S-----------------SSSSSSS
SSSS-----S---------S----S-----S--------------S--S-------------------------------
---------------------------------SS---S-----------------------------------------
-------------------------------S--------------S---------------------------------
--------------------------------------------------------------------------------
---------S-------------------------S-------------------------S---------S--------
--------SS------S--------------------------------SSSSS---SSS------S----------S-S
SS-S-SSS-SS----S-SSSS-SSSSSS----------------------------S--S--------------------
-----------------------------------------S----------------------------------S-S-
SS-------------S----S-----------------------------S--------S---------------S----
-------S-----S-------------S----------------S------------------S--SS------------
---S---------S----------S-------------S---------------------S-------------S-----
-------S-----------S----S----------S---S--S----S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_66
----------------------------------------------GGATGTTTGCATTGGGAGGC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_1342
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CTGGCTGGTTGCAGTTTCA
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>forward_1238
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AGAGCTCGTCCTGGTTCTCT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2685
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GCCTCTATCCTCGAAGTGGC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_1548
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATCTGCTAGTGGTTCACCGC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_3692
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TCTCCCCACCAAGATGTTGC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
