Multiple sequence alignment - TraesCS4B01G209800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G209800 chr4B 100.000 2771 0 0 1 2771 447458639 447455869 0.000000e+00 5118.0
1 TraesCS4B01G209800 chr4B 81.818 473 78 6 1130 1601 653586 653121 9.310000e-105 390.0
2 TraesCS4B01G209800 chr4A 93.718 2117 84 20 2 2094 103067615 103069706 0.000000e+00 3127.0
3 TraesCS4B01G209800 chr4A 80.472 466 85 5 1136 1601 603540341 603539882 4.390000e-93 351.0
4 TraesCS4B01G209800 chr4A 94.667 75 2 2 2207 2280 103069747 103069820 6.270000e-22 115.0
5 TraesCS4B01G209800 chr4D 94.470 1772 61 12 313 2080 362132703 362130965 0.000000e+00 2695.0
6 TraesCS4B01G209800 chr4D 81.607 473 79 6 1130 1601 1230953 1231418 4.330000e-103 385.0
7 TraesCS4B01G209800 chr4D 90.647 278 17 4 1 269 362132989 362132712 7.300000e-96 361.0
8 TraesCS4B01G209800 chr6D 83.087 473 72 7 1130 1601 26351124 26351589 9.170000e-115 424.0
9 TraesCS4B01G209800 chr6D 81.081 111 17 4 20 128 100941204 100941096 4.920000e-13 86.1
10 TraesCS4B01G209800 chr6A 83.051 472 74 5 1130 1601 27772868 27773333 9.170000e-115 424.0
11 TraesCS4B01G209800 chr6A 80.952 147 22 3 2288 2434 148247618 148247478 8.110000e-21 111.0
12 TraesCS4B01G209800 chr6B 81.992 472 79 4 1130 1601 48552037 48552502 2.000000e-106 396.0
13 TraesCS4B01G209800 chr6B 79.221 154 25 4 2281 2434 212971159 212971305 1.760000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G209800 chr4B 447455869 447458639 2770 True 5118 5118 100.0000 1 2771 1 chr4B.!!$R2 2770
1 TraesCS4B01G209800 chr4A 103067615 103069820 2205 False 1621 3127 94.1925 2 2280 2 chr4A.!!$F1 2278
2 TraesCS4B01G209800 chr4D 362130965 362132989 2024 True 1528 2695 92.5585 1 2080 2 chr4D.!!$R1 2079

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
684 700 0.031857 TTTTGATTGTGCCAGTGCGG 59.968 50.0 0.0 0.0 41.78 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2125 2153 0.036732 GAGGATTGCTCACCACACCA 59.963 55.0 0.0 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 1.995484 CTTGCACACTCGATCATCGTT 59.005 47.619 7.00 0.00 41.35 3.85
271 287 1.410004 AAGCGGGAATCGACTATGGA 58.590 50.000 0.00 0.00 42.43 3.41
272 288 1.633774 AGCGGGAATCGACTATGGAT 58.366 50.000 0.00 0.00 42.43 3.41
273 289 1.273606 AGCGGGAATCGACTATGGATG 59.726 52.381 0.00 0.00 42.43 3.51
274 290 1.673033 GCGGGAATCGACTATGGATGG 60.673 57.143 0.00 0.00 42.43 3.51
276 292 1.978580 GGGAATCGACTATGGATGGGT 59.021 52.381 0.00 0.00 0.00 4.51
277 293 2.372172 GGGAATCGACTATGGATGGGTT 59.628 50.000 0.00 0.00 0.00 4.11
278 294 3.403038 GGAATCGACTATGGATGGGTTG 58.597 50.000 0.00 0.00 0.00 3.77
279 295 3.403038 GAATCGACTATGGATGGGTTGG 58.597 50.000 0.00 0.00 0.00 3.77
280 296 0.468226 TCGACTATGGATGGGTTGGC 59.532 55.000 0.00 0.00 0.00 4.52
281 297 0.180171 CGACTATGGATGGGTTGGCA 59.820 55.000 0.00 0.00 0.00 4.92
282 298 1.680338 GACTATGGATGGGTTGGCAC 58.320 55.000 0.00 0.00 0.00 5.01
333 349 2.933495 TTATGGACTCCGTCGTCTTG 57.067 50.000 0.00 0.00 34.38 3.02
538 554 4.624364 CTGGGCCACACGCTCACA 62.624 66.667 0.00 0.00 45.56 3.58
539 555 4.927782 TGGGCCACACGCTCACAC 62.928 66.667 0.00 0.00 45.56 3.82
564 580 2.277756 CCGCGACGTACTACCAGC 60.278 66.667 8.23 0.00 0.00 4.85
684 700 0.031857 TTTTGATTGTGCCAGTGCGG 59.968 50.000 0.00 0.00 41.78 5.69
848 868 2.697751 CCACTAGCTAGCAACCAGAGAT 59.302 50.000 20.91 0.00 0.00 2.75
1176 1203 1.667722 CAAGAACAAGCCCAAGCCC 59.332 57.895 0.00 0.00 41.25 5.19
1407 1434 3.547746 GTTCGAGATACTCTCCCTGTCT 58.452 50.000 0.00 0.00 40.34 3.41
1593 1620 2.185350 CCGCTGGATCAAGACGCT 59.815 61.111 0.00 0.00 0.00 5.07
1731 1758 2.933287 ATGTTCGGGCAGTGGGGA 60.933 61.111 0.00 0.00 0.00 4.81
1772 1799 0.172578 CCACCGACGTCATTCTAGCA 59.827 55.000 17.16 0.00 0.00 3.49
1977 2005 5.622233 GCTTGGGAATGTGAAATTCCTACAC 60.622 44.000 13.82 0.00 45.21 2.90
1979 2007 4.258543 GGGAATGTGAAATTCCTACACGA 58.741 43.478 13.82 0.00 45.21 4.35
1989 2017 6.934645 TGAAATTCCTACACGAATCAAGAACT 59.065 34.615 0.00 0.00 31.14 3.01
1993 2021 5.470368 TCCTACACGAATCAAGAACTCAAG 58.530 41.667 0.00 0.00 0.00 3.02
2003 2031 3.569701 TCAAGAACTCAAGGAACAATGGC 59.430 43.478 0.00 0.00 0.00 4.40
2009 2037 0.529378 CAAGGAACAATGGCTGCTCC 59.471 55.000 0.00 0.00 40.19 4.70
2015 2043 1.760192 ACAATGGCTGCTCCTCAATC 58.240 50.000 0.00 0.00 35.26 2.67
2061 2089 3.719214 GGCGTTCGCCTCCTAATG 58.281 61.111 25.91 0.00 46.99 1.90
2063 2091 0.103572 GGCGTTCGCCTCCTAATGTA 59.896 55.000 25.91 0.00 46.99 2.29
2069 2097 3.469008 TCGCCTCCTAATGTACAATGG 57.531 47.619 0.00 2.62 0.00 3.16
2106 2134 6.942532 TTCATTTAACTGGATAGCATGTCC 57.057 37.500 0.00 0.00 36.26 4.02
2107 2135 6.000246 TCATTTAACTGGATAGCATGTCCA 58.000 37.500 3.69 3.69 43.26 4.02
2108 2136 6.422333 TCATTTAACTGGATAGCATGTCCAA 58.578 36.000 5.17 0.00 44.69 3.53
2109 2137 6.318648 TCATTTAACTGGATAGCATGTCCAAC 59.681 38.462 5.17 0.00 44.69 3.77
2110 2138 2.717639 ACTGGATAGCATGTCCAACC 57.282 50.000 5.17 0.00 44.69 3.77
2111 2139 1.134401 ACTGGATAGCATGTCCAACCG 60.134 52.381 5.17 0.00 44.69 4.44
2112 2140 0.463654 TGGATAGCATGTCCAACCGC 60.464 55.000 1.14 0.00 42.56 5.68
2113 2141 1.166531 GGATAGCATGTCCAACCGCC 61.167 60.000 0.00 0.00 35.76 6.13
2114 2142 1.152963 ATAGCATGTCCAACCGCCC 60.153 57.895 0.00 0.00 0.00 6.13
2115 2143 2.624674 ATAGCATGTCCAACCGCCCC 62.625 60.000 0.00 0.00 0.00 5.80
2116 2144 4.740822 GCATGTCCAACCGCCCCT 62.741 66.667 0.00 0.00 0.00 4.79
2117 2145 2.438434 CATGTCCAACCGCCCCTC 60.438 66.667 0.00 0.00 0.00 4.30
2118 2146 4.096003 ATGTCCAACCGCCCCTCG 62.096 66.667 0.00 0.00 38.08 4.63
2138 2166 4.624364 CGGCTGGTGTGGTGAGCA 62.624 66.667 0.00 0.00 34.20 4.26
2139 2167 2.203337 GGCTGGTGTGGTGAGCAA 60.203 61.111 0.00 0.00 34.20 3.91
2140 2168 1.604593 GGCTGGTGTGGTGAGCAAT 60.605 57.895 0.00 0.00 34.20 3.56
2141 2169 1.589716 GGCTGGTGTGGTGAGCAATC 61.590 60.000 0.00 0.00 34.20 2.67
2142 2170 1.589716 GCTGGTGTGGTGAGCAATCC 61.590 60.000 0.00 0.00 32.70 3.01
2143 2171 0.037303 CTGGTGTGGTGAGCAATCCT 59.963 55.000 7.61 0.00 0.00 3.24
2144 2172 0.036732 TGGTGTGGTGAGCAATCCTC 59.963 55.000 7.61 0.00 41.15 3.71
2145 2173 0.678048 GGTGTGGTGAGCAATCCTCC 60.678 60.000 0.00 0.00 39.98 4.30
2146 2174 0.036732 GTGTGGTGAGCAATCCTCCA 59.963 55.000 0.00 0.00 39.98 3.86
2147 2175 0.770499 TGTGGTGAGCAATCCTCCAA 59.230 50.000 0.00 0.00 39.98 3.53
2148 2176 1.355381 TGTGGTGAGCAATCCTCCAAT 59.645 47.619 0.00 0.00 39.98 3.16
2149 2177 2.019984 GTGGTGAGCAATCCTCCAATC 58.980 52.381 0.00 0.00 39.98 2.67
2150 2178 1.634973 TGGTGAGCAATCCTCCAATCA 59.365 47.619 0.00 0.00 39.98 2.57
2151 2179 2.242965 TGGTGAGCAATCCTCCAATCAT 59.757 45.455 0.00 0.00 39.98 2.45
2152 2180 2.883386 GGTGAGCAATCCTCCAATCATC 59.117 50.000 0.00 0.00 39.98 2.92
2153 2181 3.548770 GTGAGCAATCCTCCAATCATCA 58.451 45.455 0.00 0.00 39.98 3.07
2154 2182 3.564644 GTGAGCAATCCTCCAATCATCAG 59.435 47.826 0.00 0.00 39.98 2.90
2155 2183 3.457012 TGAGCAATCCTCCAATCATCAGA 59.543 43.478 0.00 0.00 39.98 3.27
2156 2184 4.080186 TGAGCAATCCTCCAATCATCAGAA 60.080 41.667 0.00 0.00 39.98 3.02
2157 2185 4.863548 AGCAATCCTCCAATCATCAGAAA 58.136 39.130 0.00 0.00 0.00 2.52
2158 2186 5.266788 AGCAATCCTCCAATCATCAGAAAA 58.733 37.500 0.00 0.00 0.00 2.29
2159 2187 5.718130 AGCAATCCTCCAATCATCAGAAAAA 59.282 36.000 0.00 0.00 0.00 1.94
2160 2188 6.383147 AGCAATCCTCCAATCATCAGAAAAAT 59.617 34.615 0.00 0.00 0.00 1.82
2161 2189 7.046033 GCAATCCTCCAATCATCAGAAAAATT 58.954 34.615 0.00 0.00 0.00 1.82
2162 2190 8.199449 GCAATCCTCCAATCATCAGAAAAATTA 58.801 33.333 0.00 0.00 0.00 1.40
2163 2191 9.745880 CAATCCTCCAATCATCAGAAAAATTAG 57.254 33.333 0.00 0.00 0.00 1.73
2164 2192 9.705103 AATCCTCCAATCATCAGAAAAATTAGA 57.295 29.630 0.00 0.00 0.00 2.10
2165 2193 9.878737 ATCCTCCAATCATCAGAAAAATTAGAT 57.121 29.630 0.00 0.00 0.00 1.98
2185 2213 6.690194 AGATAAGCATGTTCAATCCAGTTC 57.310 37.500 0.00 0.00 0.00 3.01
2193 2221 6.127647 GCATGTTCAATCCAGTTCCATAAGAA 60.128 38.462 0.00 0.00 0.00 2.52
2194 2222 7.577426 GCATGTTCAATCCAGTTCCATAAGAAA 60.577 37.037 0.00 0.00 35.85 2.52
2198 2226 8.306761 GTTCAATCCAGTTCCATAAGAAACAAT 58.693 33.333 0.00 0.00 35.85 2.71
2199 2227 8.421249 TCAATCCAGTTCCATAAGAAACAATT 57.579 30.769 0.00 0.00 35.85 2.32
2200 2228 9.527157 TCAATCCAGTTCCATAAGAAACAATTA 57.473 29.630 0.00 0.00 35.85 1.40
2204 2232 8.966868 TCCAGTTCCATAAGAAACAATTATTCC 58.033 33.333 0.78 0.00 35.85 3.01
2205 2233 7.915397 CCAGTTCCATAAGAAACAATTATTCCG 59.085 37.037 0.78 0.00 35.85 4.30
2269 2297 2.533916 TGCTTGGTTTGGGATATGCAA 58.466 42.857 0.00 0.00 0.00 4.08
2271 2299 2.497273 GCTTGGTTTGGGATATGCAAGT 59.503 45.455 0.00 0.00 0.00 3.16
2273 2301 4.747810 CTTGGTTTGGGATATGCAAGTTC 58.252 43.478 0.00 0.00 0.00 3.01
2274 2302 4.046286 TGGTTTGGGATATGCAAGTTCT 57.954 40.909 0.00 0.00 0.00 3.01
2280 2308 4.016444 TGGGATATGCAAGTTCTTGGTTC 58.984 43.478 13.35 0.00 0.00 3.62
2281 2309 4.016444 GGGATATGCAAGTTCTTGGTTCA 58.984 43.478 13.35 4.70 0.00 3.18
2282 2310 4.142381 GGGATATGCAAGTTCTTGGTTCAC 60.142 45.833 13.35 0.00 0.00 3.18
2283 2311 4.437390 GGATATGCAAGTTCTTGGTTCACG 60.437 45.833 13.35 0.00 0.00 4.35
2284 2312 2.031258 TGCAAGTTCTTGGTTCACGA 57.969 45.000 13.35 0.00 0.00 4.35
2285 2313 2.571212 TGCAAGTTCTTGGTTCACGAT 58.429 42.857 13.35 0.00 0.00 3.73
2286 2314 3.734463 TGCAAGTTCTTGGTTCACGATA 58.266 40.909 13.35 0.00 0.00 2.92
2287 2315 3.745975 TGCAAGTTCTTGGTTCACGATAG 59.254 43.478 13.35 0.00 46.19 2.08
2288 2316 3.424962 GCAAGTTCTTGGTTCACGATAGC 60.425 47.826 13.35 0.00 42.67 2.97
2289 2317 3.963428 AGTTCTTGGTTCACGATAGCT 57.037 42.857 0.00 0.00 42.67 3.32
2290 2318 5.168569 CAAGTTCTTGGTTCACGATAGCTA 58.831 41.667 0.00 0.00 42.67 3.32
2291 2319 5.599999 AGTTCTTGGTTCACGATAGCTAT 57.400 39.130 5.76 5.76 42.67 2.97
2292 2320 6.710597 AGTTCTTGGTTCACGATAGCTATA 57.289 37.500 6.13 0.00 42.67 1.31
2293 2321 7.291411 AGTTCTTGGTTCACGATAGCTATAT 57.709 36.000 6.13 0.00 42.67 0.86
2294 2322 7.148641 AGTTCTTGGTTCACGATAGCTATATG 58.851 38.462 6.13 8.57 42.67 1.78
2295 2323 6.650427 TCTTGGTTCACGATAGCTATATGT 57.350 37.500 6.13 5.75 42.67 2.29
2296 2324 6.447162 TCTTGGTTCACGATAGCTATATGTG 58.553 40.000 23.31 23.31 42.67 3.21
2297 2325 6.264518 TCTTGGTTCACGATAGCTATATGTGA 59.735 38.462 25.99 25.99 42.67 3.58
2298 2326 6.013842 TGGTTCACGATAGCTATATGTGAG 57.986 41.667 27.15 12.42 40.31 3.51
2299 2327 4.859798 GGTTCACGATAGCTATATGTGAGC 59.140 45.833 28.61 28.61 40.31 4.26
2300 2328 4.703645 TCACGATAGCTATATGTGAGCC 57.296 45.455 25.99 6.10 41.06 4.70
2301 2329 3.127030 TCACGATAGCTATATGTGAGCCG 59.873 47.826 25.99 17.02 41.06 5.52
2302 2330 2.159366 ACGATAGCTATATGTGAGCCGC 60.159 50.000 6.13 0.00 41.06 6.53
2303 2331 2.796383 CGATAGCTATATGTGAGCCGCC 60.796 54.545 6.13 0.00 41.06 6.13
2304 2332 1.924731 TAGCTATATGTGAGCCGCCT 58.075 50.000 0.00 0.00 41.06 5.52
2305 2333 0.319728 AGCTATATGTGAGCCGCCTG 59.680 55.000 0.00 0.00 41.06 4.85
2306 2334 0.318441 GCTATATGTGAGCCGCCTGA 59.682 55.000 0.00 0.00 33.60 3.86
2307 2335 1.270305 GCTATATGTGAGCCGCCTGAA 60.270 52.381 0.00 0.00 33.60 3.02
2308 2336 2.613977 GCTATATGTGAGCCGCCTGAAT 60.614 50.000 0.00 0.00 33.60 2.57
2309 2337 2.645838 ATATGTGAGCCGCCTGAATT 57.354 45.000 0.00 0.00 0.00 2.17
2310 2338 2.418368 TATGTGAGCCGCCTGAATTT 57.582 45.000 0.00 0.00 0.00 1.82
2311 2339 0.813184 ATGTGAGCCGCCTGAATTTG 59.187 50.000 0.00 0.00 0.00 2.32
2312 2340 1.153958 GTGAGCCGCCTGAATTTGC 60.154 57.895 0.00 0.00 0.00 3.68
2313 2341 1.603171 TGAGCCGCCTGAATTTGCA 60.603 52.632 0.00 0.00 0.00 4.08
2314 2342 1.177895 TGAGCCGCCTGAATTTGCAA 61.178 50.000 0.00 0.00 0.00 4.08
2315 2343 0.174162 GAGCCGCCTGAATTTGCAAT 59.826 50.000 0.00 0.00 0.00 3.56
2316 2344 1.405105 GAGCCGCCTGAATTTGCAATA 59.595 47.619 0.00 0.00 0.00 1.90
2317 2345 2.034124 AGCCGCCTGAATTTGCAATAT 58.966 42.857 0.00 0.00 0.00 1.28
2318 2346 2.129607 GCCGCCTGAATTTGCAATATG 58.870 47.619 0.00 0.00 0.00 1.78
2319 2347 2.746269 CCGCCTGAATTTGCAATATGG 58.254 47.619 0.00 0.01 0.00 2.74
2320 2348 2.546373 CCGCCTGAATTTGCAATATGGG 60.546 50.000 0.00 0.79 0.00 4.00
2321 2349 2.101249 CGCCTGAATTTGCAATATGGGT 59.899 45.455 0.00 0.00 0.00 4.51
2322 2350 3.460103 GCCTGAATTTGCAATATGGGTG 58.540 45.455 0.00 0.00 0.00 4.61
2323 2351 3.132646 GCCTGAATTTGCAATATGGGTGA 59.867 43.478 0.00 0.00 0.00 4.02
2324 2352 4.738541 GCCTGAATTTGCAATATGGGTGAG 60.739 45.833 0.00 0.00 0.00 3.51
2325 2353 4.403432 CCTGAATTTGCAATATGGGTGAGT 59.597 41.667 0.00 0.00 0.00 3.41
2326 2354 5.450965 CCTGAATTTGCAATATGGGTGAGTC 60.451 44.000 0.00 0.00 0.00 3.36
2327 2355 4.096231 TGAATTTGCAATATGGGTGAGTCG 59.904 41.667 0.00 0.00 0.00 4.18
2328 2356 3.342377 TTTGCAATATGGGTGAGTCGA 57.658 42.857 0.00 0.00 0.00 4.20
2329 2357 3.558931 TTGCAATATGGGTGAGTCGAT 57.441 42.857 0.00 0.00 0.00 3.59
2330 2358 3.558931 TGCAATATGGGTGAGTCGATT 57.441 42.857 0.00 0.00 0.00 3.34
2331 2359 3.884895 TGCAATATGGGTGAGTCGATTT 58.115 40.909 0.00 0.00 0.00 2.17
2332 2360 4.269183 TGCAATATGGGTGAGTCGATTTT 58.731 39.130 0.00 0.00 0.00 1.82
2333 2361 4.704540 TGCAATATGGGTGAGTCGATTTTT 59.295 37.500 0.00 0.00 0.00 1.94
2334 2362 5.036737 GCAATATGGGTGAGTCGATTTTTG 58.963 41.667 0.00 0.00 0.00 2.44
2335 2363 5.581605 CAATATGGGTGAGTCGATTTTTGG 58.418 41.667 0.00 0.00 0.00 3.28
2336 2364 2.940994 TGGGTGAGTCGATTTTTGGA 57.059 45.000 0.00 0.00 0.00 3.53
2337 2365 3.216187 TGGGTGAGTCGATTTTTGGAA 57.784 42.857 0.00 0.00 0.00 3.53
2338 2366 3.146066 TGGGTGAGTCGATTTTTGGAAG 58.854 45.455 0.00 0.00 0.00 3.46
2339 2367 3.181449 TGGGTGAGTCGATTTTTGGAAGA 60.181 43.478 0.00 0.00 0.00 2.87
2340 2368 3.437049 GGGTGAGTCGATTTTTGGAAGAG 59.563 47.826 0.00 0.00 0.00 2.85
2341 2369 3.437049 GGTGAGTCGATTTTTGGAAGAGG 59.563 47.826 0.00 0.00 0.00 3.69
2342 2370 4.315803 GTGAGTCGATTTTTGGAAGAGGA 58.684 43.478 0.00 0.00 0.00 3.71
2343 2371 4.755123 GTGAGTCGATTTTTGGAAGAGGAA 59.245 41.667 0.00 0.00 0.00 3.36
2344 2372 4.997395 TGAGTCGATTTTTGGAAGAGGAAG 59.003 41.667 0.00 0.00 0.00 3.46
2345 2373 5.221641 TGAGTCGATTTTTGGAAGAGGAAGA 60.222 40.000 0.00 0.00 0.00 2.87
2346 2374 5.621193 AGTCGATTTTTGGAAGAGGAAGAA 58.379 37.500 0.00 0.00 0.00 2.52
2347 2375 6.062095 AGTCGATTTTTGGAAGAGGAAGAAA 58.938 36.000 0.00 0.00 0.00 2.52
2348 2376 6.717084 AGTCGATTTTTGGAAGAGGAAGAAAT 59.283 34.615 0.00 0.00 0.00 2.17
2349 2377 7.231519 AGTCGATTTTTGGAAGAGGAAGAAATT 59.768 33.333 0.00 0.00 0.00 1.82
2350 2378 7.539022 GTCGATTTTTGGAAGAGGAAGAAATTC 59.461 37.037 0.00 0.00 0.00 2.17
2351 2379 7.230510 TCGATTTTTGGAAGAGGAAGAAATTCA 59.769 33.333 0.00 0.00 0.00 2.57
2352 2380 8.031277 CGATTTTTGGAAGAGGAAGAAATTCAT 58.969 33.333 0.00 0.00 0.00 2.57
2353 2381 9.363763 GATTTTTGGAAGAGGAAGAAATTCATC 57.636 33.333 0.00 0.00 32.43 2.92
2354 2382 6.500684 TTTGGAAGAGGAAGAAATTCATCG 57.499 37.500 0.00 0.00 36.90 3.84
2355 2383 4.517285 TGGAAGAGGAAGAAATTCATCGG 58.483 43.478 0.00 0.00 36.90 4.18
2356 2384 4.225042 TGGAAGAGGAAGAAATTCATCGGA 59.775 41.667 0.00 0.00 36.90 4.55
2357 2385 5.186198 GGAAGAGGAAGAAATTCATCGGAA 58.814 41.667 0.00 0.00 36.90 4.30
2358 2386 5.295540 GGAAGAGGAAGAAATTCATCGGAAG 59.704 44.000 0.00 0.00 36.90 3.46
2359 2387 4.775236 AGAGGAAGAAATTCATCGGAAGG 58.225 43.478 0.00 0.00 36.90 3.46
2360 2388 4.471386 AGAGGAAGAAATTCATCGGAAGGA 59.529 41.667 0.00 0.00 36.90 3.36
2361 2389 5.045578 AGAGGAAGAAATTCATCGGAAGGAA 60.046 40.000 0.00 0.00 36.90 3.36
2362 2390 5.189180 AGGAAGAAATTCATCGGAAGGAAG 58.811 41.667 0.00 0.00 36.25 3.46
2363 2391 4.336713 GGAAGAAATTCATCGGAAGGAAGG 59.663 45.833 0.00 0.00 36.25 3.46
2364 2392 4.844349 AGAAATTCATCGGAAGGAAGGA 57.156 40.909 0.00 0.00 36.25 3.36
2365 2393 5.179452 AGAAATTCATCGGAAGGAAGGAA 57.821 39.130 0.00 0.00 36.25 3.36
2366 2394 5.189180 AGAAATTCATCGGAAGGAAGGAAG 58.811 41.667 0.00 0.00 36.25 3.46
2367 2395 3.567478 ATTCATCGGAAGGAAGGAAGG 57.433 47.619 2.64 0.00 36.25 3.46
2368 2396 1.204146 TCATCGGAAGGAAGGAAGGG 58.796 55.000 0.00 0.00 0.00 3.95
2369 2397 1.204146 CATCGGAAGGAAGGAAGGGA 58.796 55.000 0.00 0.00 0.00 4.20
2370 2398 1.771255 CATCGGAAGGAAGGAAGGGAT 59.229 52.381 0.00 0.00 0.00 3.85
2371 2399 1.204146 TCGGAAGGAAGGAAGGGATG 58.796 55.000 0.00 0.00 0.00 3.51
2372 2400 1.204146 CGGAAGGAAGGAAGGGATGA 58.796 55.000 0.00 0.00 0.00 2.92
2373 2401 1.559682 CGGAAGGAAGGAAGGGATGAA 59.440 52.381 0.00 0.00 0.00 2.57
2374 2402 2.420687 CGGAAGGAAGGAAGGGATGAAG 60.421 54.545 0.00 0.00 0.00 3.02
2375 2403 2.092158 GGAAGGAAGGAAGGGATGAAGG 60.092 54.545 0.00 0.00 0.00 3.46
2376 2404 2.668850 AGGAAGGAAGGGATGAAGGA 57.331 50.000 0.00 0.00 0.00 3.36
2377 2405 2.934722 AGGAAGGAAGGGATGAAGGAA 58.065 47.619 0.00 0.00 0.00 3.36
2378 2406 2.849318 AGGAAGGAAGGGATGAAGGAAG 59.151 50.000 0.00 0.00 0.00 3.46
2379 2407 2.092158 GGAAGGAAGGGATGAAGGAAGG 60.092 54.545 0.00 0.00 0.00 3.46
2380 2408 2.668850 AGGAAGGGATGAAGGAAGGA 57.331 50.000 0.00 0.00 0.00 3.36
2381 2409 2.486716 AGGAAGGGATGAAGGAAGGAG 58.513 52.381 0.00 0.00 0.00 3.69
2382 2410 1.133945 GGAAGGGATGAAGGAAGGAGC 60.134 57.143 0.00 0.00 0.00 4.70
2383 2411 1.561542 GAAGGGATGAAGGAAGGAGCA 59.438 52.381 0.00 0.00 0.00 4.26
2384 2412 1.211456 AGGGATGAAGGAAGGAGCAG 58.789 55.000 0.00 0.00 0.00 4.24
2385 2413 0.465278 GGGATGAAGGAAGGAGCAGC 60.465 60.000 0.00 0.00 0.00 5.25
2386 2414 0.465278 GGATGAAGGAAGGAGCAGCC 60.465 60.000 0.00 0.00 0.00 4.85
2387 2415 0.254178 GATGAAGGAAGGAGCAGCCA 59.746 55.000 0.00 0.00 40.02 4.75
2388 2416 0.924823 ATGAAGGAAGGAGCAGCCAT 59.075 50.000 0.00 0.00 40.02 4.40
2389 2417 0.254178 TGAAGGAAGGAGCAGCCATC 59.746 55.000 0.00 0.00 40.02 3.51
2390 2418 0.813210 GAAGGAAGGAGCAGCCATCG 60.813 60.000 0.00 0.00 40.02 3.84
2391 2419 2.203126 GGAAGGAGCAGCCATCGG 60.203 66.667 0.00 0.00 40.02 4.18
2402 2430 3.822607 GCCATCGGCGATCTATCTT 57.177 52.632 21.25 0.00 39.62 2.40
2403 2431 2.941453 GCCATCGGCGATCTATCTTA 57.059 50.000 21.25 0.00 39.62 2.10
2404 2432 2.803451 GCCATCGGCGATCTATCTTAG 58.197 52.381 21.25 6.00 39.62 2.18
2405 2433 2.480416 GCCATCGGCGATCTATCTTAGG 60.480 54.545 21.25 16.15 39.62 2.69
2406 2434 2.099921 CCATCGGCGATCTATCTTAGGG 59.900 54.545 21.25 11.00 0.00 3.53
2407 2435 2.581216 TCGGCGATCTATCTTAGGGT 57.419 50.000 4.99 0.00 0.00 4.34
2408 2436 2.160205 TCGGCGATCTATCTTAGGGTG 58.840 52.381 4.99 0.00 0.00 4.61
2409 2437 1.202582 CGGCGATCTATCTTAGGGTGG 59.797 57.143 0.00 0.00 0.00 4.61
2410 2438 1.066787 GGCGATCTATCTTAGGGTGGC 60.067 57.143 0.00 0.00 0.00 5.01
2411 2439 1.618837 GCGATCTATCTTAGGGTGGCA 59.381 52.381 0.00 0.00 0.00 4.92
2412 2440 2.353208 GCGATCTATCTTAGGGTGGCAG 60.353 54.545 0.00 0.00 0.00 4.85
2413 2441 2.232452 CGATCTATCTTAGGGTGGCAGG 59.768 54.545 0.00 0.00 0.00 4.85
2414 2442 1.424638 TCTATCTTAGGGTGGCAGGC 58.575 55.000 0.00 0.00 0.00 4.85
2415 2443 1.062121 TCTATCTTAGGGTGGCAGGCT 60.062 52.381 0.00 0.00 0.00 4.58
2416 2444 1.346068 CTATCTTAGGGTGGCAGGCTC 59.654 57.143 0.00 0.00 0.00 4.70
2417 2445 1.690219 ATCTTAGGGTGGCAGGCTCG 61.690 60.000 0.00 0.00 0.00 5.03
2418 2446 2.606519 TTAGGGTGGCAGGCTCGT 60.607 61.111 0.00 0.00 0.00 4.18
2419 2447 2.579684 CTTAGGGTGGCAGGCTCGTC 62.580 65.000 0.00 0.00 0.00 4.20
2427 2455 2.509336 CAGGCTCGTCGGCGATTT 60.509 61.111 14.65 0.00 46.80 2.17
2428 2456 1.226859 CAGGCTCGTCGGCGATTTA 60.227 57.895 14.65 0.15 46.80 1.40
2429 2457 0.597637 CAGGCTCGTCGGCGATTTAT 60.598 55.000 14.65 0.00 46.80 1.40
2430 2458 0.104304 AGGCTCGTCGGCGATTTATT 59.896 50.000 14.65 0.00 46.80 1.40
2431 2459 0.935196 GGCTCGTCGGCGATTTATTT 59.065 50.000 14.65 0.00 46.80 1.40
2432 2460 1.329599 GGCTCGTCGGCGATTTATTTT 59.670 47.619 14.65 0.00 46.80 1.82
2433 2461 2.540931 GGCTCGTCGGCGATTTATTTTA 59.459 45.455 14.65 0.00 46.80 1.52
2434 2462 3.362693 GGCTCGTCGGCGATTTATTTTAG 60.363 47.826 14.65 0.00 46.80 1.85
2435 2463 3.362693 GCTCGTCGGCGATTTATTTTAGG 60.363 47.826 14.65 0.00 46.80 2.69
2436 2464 3.125316 TCGTCGGCGATTTATTTTAGGG 58.875 45.455 14.79 0.00 42.81 3.53
2437 2465 2.222445 CGTCGGCGATTTATTTTAGGGG 59.778 50.000 14.79 0.00 41.33 4.79
2438 2466 3.208594 GTCGGCGATTTATTTTAGGGGT 58.791 45.455 14.79 0.00 0.00 4.95
2439 2467 3.002965 GTCGGCGATTTATTTTAGGGGTG 59.997 47.826 14.79 0.00 0.00 4.61
2440 2468 2.292292 CGGCGATTTATTTTAGGGGTGG 59.708 50.000 0.00 0.00 0.00 4.61
2441 2469 2.626266 GGCGATTTATTTTAGGGGTGGG 59.374 50.000 0.00 0.00 0.00 4.61
2442 2470 2.626266 GCGATTTATTTTAGGGGTGGGG 59.374 50.000 0.00 0.00 0.00 4.96
2443 2471 3.227614 CGATTTATTTTAGGGGTGGGGG 58.772 50.000 0.00 0.00 0.00 5.40
2462 2490 3.499737 CGGGCATGCAGGTTCGTC 61.500 66.667 21.36 0.00 0.00 4.20
2463 2491 3.499737 GGGCATGCAGGTTCGTCG 61.500 66.667 21.36 0.00 0.00 5.12
2464 2492 2.434185 GGCATGCAGGTTCGTCGA 60.434 61.111 21.36 0.00 0.00 4.20
2465 2493 2.032634 GGCATGCAGGTTCGTCGAA 61.033 57.895 21.36 2.90 0.00 3.71
2466 2494 1.573829 GGCATGCAGGTTCGTCGAAA 61.574 55.000 21.36 0.00 0.00 3.46
2467 2495 0.237235 GCATGCAGGTTCGTCGAAAA 59.763 50.000 14.21 0.00 0.00 2.29
2468 2496 1.135689 GCATGCAGGTTCGTCGAAAAT 60.136 47.619 14.21 0.00 0.00 1.82
2469 2497 2.668279 GCATGCAGGTTCGTCGAAAATT 60.668 45.455 14.21 0.00 0.00 1.82
2470 2498 3.564511 CATGCAGGTTCGTCGAAAATTT 58.435 40.909 9.70 0.00 0.00 1.82
2471 2499 3.701532 TGCAGGTTCGTCGAAAATTTT 57.298 38.095 9.70 2.28 0.00 1.82
2472 2500 4.035278 TGCAGGTTCGTCGAAAATTTTT 57.965 36.364 9.70 0.00 0.00 1.94
2473 2501 3.794028 TGCAGGTTCGTCGAAAATTTTTG 59.206 39.130 9.70 11.39 0.00 2.44
2474 2502 3.794564 GCAGGTTCGTCGAAAATTTTTGT 59.205 39.130 16.14 0.00 0.00 2.83
2475 2503 4.266739 GCAGGTTCGTCGAAAATTTTTGTT 59.733 37.500 16.14 0.00 0.00 2.83
2476 2504 5.553766 GCAGGTTCGTCGAAAATTTTTGTTC 60.554 40.000 16.14 10.55 0.00 3.18
2477 2505 5.038683 AGGTTCGTCGAAAATTTTTGTTCC 58.961 37.500 16.14 12.18 0.00 3.62
2478 2506 5.038683 GGTTCGTCGAAAATTTTTGTTCCT 58.961 37.500 16.14 0.00 0.00 3.36
2479 2507 5.172591 GGTTCGTCGAAAATTTTTGTTCCTC 59.827 40.000 16.14 7.22 0.00 3.71
2480 2508 5.487153 TCGTCGAAAATTTTTGTTCCTCA 57.513 34.783 16.14 0.00 0.00 3.86
2481 2509 6.067263 TCGTCGAAAATTTTTGTTCCTCAT 57.933 33.333 16.14 0.00 0.00 2.90
2482 2510 6.140110 TCGTCGAAAATTTTTGTTCCTCATC 58.860 36.000 16.14 0.00 0.00 2.92
2483 2511 5.058008 CGTCGAAAATTTTTGTTCCTCATCG 59.942 40.000 16.14 6.64 0.00 3.84
2484 2512 5.342259 GTCGAAAATTTTTGTTCCTCATCGG 59.658 40.000 16.14 0.00 0.00 4.18
2485 2513 4.621034 CGAAAATTTTTGTTCCTCATCGGG 59.379 41.667 4.63 0.00 0.00 5.14
2486 2514 5.538118 GAAAATTTTTGTTCCTCATCGGGT 58.462 37.500 4.63 0.00 0.00 5.28
2487 2515 5.545063 AAATTTTTGTTCCTCATCGGGTT 57.455 34.783 0.00 0.00 0.00 4.11
2488 2516 6.658188 AAATTTTTGTTCCTCATCGGGTTA 57.342 33.333 0.00 0.00 0.00 2.85
2489 2517 5.897377 ATTTTTGTTCCTCATCGGGTTAG 57.103 39.130 0.00 0.00 0.00 2.34
2490 2518 4.627284 TTTTGTTCCTCATCGGGTTAGA 57.373 40.909 0.00 0.00 0.00 2.10
2491 2519 3.887621 TTGTTCCTCATCGGGTTAGAG 57.112 47.619 0.00 0.00 0.00 2.43
2494 2522 3.533697 CCTCATCGGGTTAGAGGGA 57.466 57.895 0.00 0.00 44.10 4.20
2495 2523 2.016905 CCTCATCGGGTTAGAGGGAT 57.983 55.000 0.00 0.00 44.10 3.85
2496 2524 1.620819 CCTCATCGGGTTAGAGGGATG 59.379 57.143 0.00 0.00 44.10 3.51
2497 2525 1.620819 CTCATCGGGTTAGAGGGATGG 59.379 57.143 0.62 0.00 37.47 3.51
2498 2526 1.062428 TCATCGGGTTAGAGGGATGGT 60.062 52.381 0.62 0.00 37.47 3.55
2499 2527 1.344763 CATCGGGTTAGAGGGATGGTC 59.655 57.143 0.00 0.00 34.16 4.02
2500 2528 0.754217 TCGGGTTAGAGGGATGGTCG 60.754 60.000 0.00 0.00 0.00 4.79
2501 2529 1.041447 CGGGTTAGAGGGATGGTCGT 61.041 60.000 0.00 0.00 0.00 4.34
2502 2530 0.464452 GGGTTAGAGGGATGGTCGTG 59.536 60.000 0.00 0.00 0.00 4.35
2503 2531 0.464452 GGTTAGAGGGATGGTCGTGG 59.536 60.000 0.00 0.00 0.00 4.94
2504 2532 0.464452 GTTAGAGGGATGGTCGTGGG 59.536 60.000 0.00 0.00 0.00 4.61
2505 2533 0.042131 TTAGAGGGATGGTCGTGGGT 59.958 55.000 0.00 0.00 0.00 4.51
2506 2534 0.686441 TAGAGGGATGGTCGTGGGTG 60.686 60.000 0.00 0.00 0.00 4.61
2507 2535 3.009115 AGGGATGGTCGTGGGTGG 61.009 66.667 0.00 0.00 0.00 4.61
2508 2536 4.796495 GGGATGGTCGTGGGTGGC 62.796 72.222 0.00 0.00 0.00 5.01
2510 2538 4.388499 GATGGTCGTGGGTGGCGT 62.388 66.667 0.00 0.00 0.00 5.68
2511 2539 4.388499 ATGGTCGTGGGTGGCGTC 62.388 66.667 0.00 0.00 0.00 5.19
2526 2554 4.295119 GTCAGCACGACGGTGGGT 62.295 66.667 0.00 0.00 44.54 4.51
2527 2555 4.293648 TCAGCACGACGGTGGGTG 62.294 66.667 0.00 4.59 44.54 4.61
2528 2556 4.293648 CAGCACGACGGTGGGTGA 62.294 66.667 11.79 0.00 44.54 4.02
2529 2557 3.311110 AGCACGACGGTGGGTGAT 61.311 61.111 11.79 3.93 44.54 3.06
2530 2558 3.118454 GCACGACGGTGGGTGATG 61.118 66.667 11.79 0.00 44.54 3.07
2531 2559 2.434185 CACGACGGTGGGTGATGG 60.434 66.667 0.00 0.00 40.58 3.51
2532 2560 2.920912 ACGACGGTGGGTGATGGT 60.921 61.111 0.00 0.00 0.00 3.55
2533 2561 2.345991 CGACGGTGGGTGATGGTT 59.654 61.111 0.00 0.00 0.00 3.67
2534 2562 2.032634 CGACGGTGGGTGATGGTTG 61.033 63.158 0.00 0.00 0.00 3.77
2535 2563 1.674322 GACGGTGGGTGATGGTTGG 60.674 63.158 0.00 0.00 0.00 3.77
2536 2564 2.361104 CGGTGGGTGATGGTTGGG 60.361 66.667 0.00 0.00 0.00 4.12
2537 2565 2.037208 GGTGGGTGATGGTTGGGG 59.963 66.667 0.00 0.00 0.00 4.96
2538 2566 2.543797 GGTGGGTGATGGTTGGGGA 61.544 63.158 0.00 0.00 0.00 4.81
2539 2567 1.000896 GTGGGTGATGGTTGGGGAG 60.001 63.158 0.00 0.00 0.00 4.30
2540 2568 2.237965 TGGGTGATGGTTGGGGAGG 61.238 63.158 0.00 0.00 0.00 4.30
2541 2569 1.928567 GGGTGATGGTTGGGGAGGA 60.929 63.158 0.00 0.00 0.00 3.71
2542 2570 1.609783 GGTGATGGTTGGGGAGGAG 59.390 63.158 0.00 0.00 0.00 3.69
2543 2571 1.609783 GTGATGGTTGGGGAGGAGG 59.390 63.158 0.00 0.00 0.00 4.30
2544 2572 1.619363 TGATGGTTGGGGAGGAGGG 60.619 63.158 0.00 0.00 0.00 4.30
2545 2573 3.023735 ATGGTTGGGGAGGAGGGC 61.024 66.667 0.00 0.00 0.00 5.19
2575 2603 4.827087 CAGGCGCAGGAGCATCGT 62.827 66.667 10.83 0.00 42.27 3.73
2576 2604 4.521062 AGGCGCAGGAGCATCGTC 62.521 66.667 10.83 0.00 42.27 4.20
2577 2605 4.819761 GGCGCAGGAGCATCGTCA 62.820 66.667 10.83 0.00 42.27 4.35
2578 2606 3.260483 GCGCAGGAGCATCGTCAG 61.260 66.667 0.30 0.00 42.27 3.51
2579 2607 3.260483 CGCAGGAGCATCGTCAGC 61.260 66.667 0.00 0.00 42.27 4.26
2580 2608 2.125391 GCAGGAGCATCGTCAGCA 60.125 61.111 0.00 0.00 41.58 4.41
2581 2609 2.172372 GCAGGAGCATCGTCAGCAG 61.172 63.158 0.00 0.00 41.58 4.24
2582 2610 2.172372 CAGGAGCATCGTCAGCAGC 61.172 63.158 0.00 0.00 34.37 5.25
2583 2611 3.260483 GGAGCATCGTCAGCAGCG 61.260 66.667 0.00 0.00 34.37 5.18
2584 2612 3.260483 GAGCATCGTCAGCAGCGG 61.260 66.667 0.00 0.00 0.00 5.52
2585 2613 4.827087 AGCATCGTCAGCAGCGGG 62.827 66.667 0.00 0.00 0.00 6.13
2617 2645 2.439519 GGTTGGGCCGGTGGTATG 60.440 66.667 1.90 0.00 0.00 2.39
2618 2646 2.353573 GTTGGGCCGGTGGTATGT 59.646 61.111 1.90 0.00 0.00 2.29
2619 2647 1.747745 GTTGGGCCGGTGGTATGTC 60.748 63.158 1.90 0.00 0.00 3.06
2620 2648 3.318006 TTGGGCCGGTGGTATGTCG 62.318 63.158 1.90 0.00 0.00 4.35
2621 2649 4.540735 GGGCCGGTGGTATGTCGG 62.541 72.222 1.90 0.00 45.84 4.79
2622 2650 4.540735 GGCCGGTGGTATGTCGGG 62.541 72.222 1.90 0.00 43.55 5.14
2624 2652 4.884257 CCGGTGGTATGTCGGGCG 62.884 72.222 0.00 0.00 40.07 6.13
2625 2653 4.884257 CGGTGGTATGTCGGGCGG 62.884 72.222 0.00 0.00 0.00 6.13
2626 2654 3.777910 GGTGGTATGTCGGGCGGT 61.778 66.667 0.00 0.00 0.00 5.68
2627 2655 2.266689 GTGGTATGTCGGGCGGTT 59.733 61.111 0.00 0.00 0.00 4.44
2628 2656 1.376295 GTGGTATGTCGGGCGGTTT 60.376 57.895 0.00 0.00 0.00 3.27
2629 2657 1.376166 TGGTATGTCGGGCGGTTTG 60.376 57.895 0.00 0.00 0.00 2.93
2630 2658 1.078988 GGTATGTCGGGCGGTTTGA 60.079 57.895 0.00 0.00 0.00 2.69
2631 2659 1.087771 GGTATGTCGGGCGGTTTGAG 61.088 60.000 0.00 0.00 0.00 3.02
2632 2660 0.390735 GTATGTCGGGCGGTTTGAGT 60.391 55.000 0.00 0.00 0.00 3.41
2633 2661 1.135024 GTATGTCGGGCGGTTTGAGTA 60.135 52.381 0.00 0.00 0.00 2.59
2634 2662 0.322322 ATGTCGGGCGGTTTGAGTAA 59.678 50.000 0.00 0.00 0.00 2.24
2635 2663 0.106335 TGTCGGGCGGTTTGAGTAAA 59.894 50.000 0.00 0.00 0.00 2.01
2636 2664 1.228533 GTCGGGCGGTTTGAGTAAAA 58.771 50.000 0.00 0.00 0.00 1.52
2637 2665 1.603326 GTCGGGCGGTTTGAGTAAAAA 59.397 47.619 0.00 0.00 0.00 1.94
2638 2666 1.874872 TCGGGCGGTTTGAGTAAAAAG 59.125 47.619 0.00 0.00 0.00 2.27
2639 2667 1.874872 CGGGCGGTTTGAGTAAAAAGA 59.125 47.619 0.00 0.00 0.00 2.52
2640 2668 2.486592 CGGGCGGTTTGAGTAAAAAGAT 59.513 45.455 0.00 0.00 0.00 2.40
2641 2669 3.669557 CGGGCGGTTTGAGTAAAAAGATG 60.670 47.826 0.00 0.00 0.00 2.90
2642 2670 3.504520 GGGCGGTTTGAGTAAAAAGATGA 59.495 43.478 0.00 0.00 0.00 2.92
2643 2671 4.022676 GGGCGGTTTGAGTAAAAAGATGAA 60.023 41.667 0.00 0.00 0.00 2.57
2644 2672 4.915667 GGCGGTTTGAGTAAAAAGATGAAC 59.084 41.667 0.00 0.00 0.00 3.18
2645 2673 5.506649 GGCGGTTTGAGTAAAAAGATGAACA 60.507 40.000 0.00 0.00 0.00 3.18
2646 2674 5.974751 GCGGTTTGAGTAAAAAGATGAACAA 59.025 36.000 0.00 0.00 0.00 2.83
2647 2675 6.474102 GCGGTTTGAGTAAAAAGATGAACAAA 59.526 34.615 0.00 0.00 0.00 2.83
2648 2676 7.009723 GCGGTTTGAGTAAAAAGATGAACAAAA 59.990 33.333 0.00 0.00 0.00 2.44
2649 2677 8.531530 CGGTTTGAGTAAAAAGATGAACAAAAG 58.468 33.333 0.00 0.00 0.00 2.27
2650 2678 9.581099 GGTTTGAGTAAAAAGATGAACAAAAGA 57.419 29.630 0.00 0.00 0.00 2.52
2656 2684 9.546428 AGTAAAAAGATGAACAAAAGATTTGGG 57.454 29.630 7.64 0.00 0.00 4.12
2657 2685 6.866010 AAAAGATGAACAAAAGATTTGGGC 57.134 33.333 7.64 0.37 0.00 5.36
2658 2686 5.813513 AAGATGAACAAAAGATTTGGGCT 57.186 34.783 7.64 0.00 0.00 5.19
2659 2687 6.916360 AAGATGAACAAAAGATTTGGGCTA 57.084 33.333 7.64 0.00 0.00 3.93
2660 2688 6.521151 AGATGAACAAAAGATTTGGGCTAG 57.479 37.500 7.64 0.00 0.00 3.42
2661 2689 6.248433 AGATGAACAAAAGATTTGGGCTAGA 58.752 36.000 7.64 0.00 0.00 2.43
2662 2690 5.964958 TGAACAAAAGATTTGGGCTAGAG 57.035 39.130 7.64 0.00 0.00 2.43
2663 2691 4.766891 TGAACAAAAGATTTGGGCTAGAGG 59.233 41.667 7.64 0.00 0.00 3.69
2664 2692 4.388577 ACAAAAGATTTGGGCTAGAGGT 57.611 40.909 7.64 0.00 0.00 3.85
2665 2693 4.740902 ACAAAAGATTTGGGCTAGAGGTT 58.259 39.130 7.64 0.00 0.00 3.50
2666 2694 4.524328 ACAAAAGATTTGGGCTAGAGGTTG 59.476 41.667 7.64 0.00 0.00 3.77
2667 2695 4.657814 AAAGATTTGGGCTAGAGGTTGA 57.342 40.909 0.00 0.00 0.00 3.18
2668 2696 4.657814 AAGATTTGGGCTAGAGGTTGAA 57.342 40.909 0.00 0.00 0.00 2.69
2669 2697 4.227864 AGATTTGGGCTAGAGGTTGAAG 57.772 45.455 0.00 0.00 0.00 3.02
2670 2698 3.846588 AGATTTGGGCTAGAGGTTGAAGA 59.153 43.478 0.00 0.00 0.00 2.87
2671 2699 4.289672 AGATTTGGGCTAGAGGTTGAAGAA 59.710 41.667 0.00 0.00 0.00 2.52
2672 2700 4.447138 TTTGGGCTAGAGGTTGAAGAAA 57.553 40.909 0.00 0.00 0.00 2.52
2673 2701 3.703001 TGGGCTAGAGGTTGAAGAAAG 57.297 47.619 0.00 0.00 0.00 2.62
2674 2702 3.248024 TGGGCTAGAGGTTGAAGAAAGA 58.752 45.455 0.00 0.00 0.00 2.52
2675 2703 3.846588 TGGGCTAGAGGTTGAAGAAAGAT 59.153 43.478 0.00 0.00 0.00 2.40
2676 2704 5.030147 TGGGCTAGAGGTTGAAGAAAGATA 58.970 41.667 0.00 0.00 0.00 1.98
2677 2705 5.667626 TGGGCTAGAGGTTGAAGAAAGATAT 59.332 40.000 0.00 0.00 0.00 1.63
2678 2706 6.844388 TGGGCTAGAGGTTGAAGAAAGATATA 59.156 38.462 0.00 0.00 0.00 0.86
2679 2707 7.514127 TGGGCTAGAGGTTGAAGAAAGATATAT 59.486 37.037 0.00 0.00 0.00 0.86
2680 2708 9.036980 GGGCTAGAGGTTGAAGAAAGATATATA 57.963 37.037 0.00 0.00 0.00 0.86
2702 2730 7.969387 ATAATCGTTCATTTTTCATCCAACG 57.031 32.000 0.00 0.00 38.33 4.10
2703 2731 5.621197 ATCGTTCATTTTTCATCCAACGA 57.379 34.783 7.12 7.12 46.70 3.85
2704 2732 4.778904 TCGTTCATTTTTCATCCAACGAC 58.221 39.130 0.82 0.00 40.33 4.34
2705 2733 3.911964 CGTTCATTTTTCATCCAACGACC 59.088 43.478 0.00 0.00 39.10 4.79
2706 2734 4.320202 CGTTCATTTTTCATCCAACGACCT 60.320 41.667 0.00 0.00 39.10 3.85
2707 2735 5.106869 CGTTCATTTTTCATCCAACGACCTA 60.107 40.000 0.00 0.00 39.10 3.08
2708 2736 6.566942 CGTTCATTTTTCATCCAACGACCTAA 60.567 38.462 0.00 0.00 39.10 2.69
2709 2737 6.885952 TCATTTTTCATCCAACGACCTAAA 57.114 33.333 0.00 0.00 0.00 1.85
2710 2738 7.278461 TCATTTTTCATCCAACGACCTAAAA 57.722 32.000 0.00 0.00 0.00 1.52
2711 2739 7.142680 TCATTTTTCATCCAACGACCTAAAAC 58.857 34.615 0.00 0.00 0.00 2.43
2712 2740 6.452494 TTTTTCATCCAACGACCTAAAACA 57.548 33.333 0.00 0.00 0.00 2.83
2713 2741 6.452494 TTTTCATCCAACGACCTAAAACAA 57.548 33.333 0.00 0.00 0.00 2.83
2714 2742 6.452494 TTTCATCCAACGACCTAAAACAAA 57.548 33.333 0.00 0.00 0.00 2.83
2715 2743 6.642707 TTCATCCAACGACCTAAAACAAAT 57.357 33.333 0.00 0.00 0.00 2.32
2716 2744 6.249035 TCATCCAACGACCTAAAACAAATC 57.751 37.500 0.00 0.00 0.00 2.17
2717 2745 4.735662 TCCAACGACCTAAAACAAATCG 57.264 40.909 0.00 0.00 38.71 3.34
2718 2746 4.378774 TCCAACGACCTAAAACAAATCGA 58.621 39.130 0.00 0.00 36.64 3.59
2719 2747 4.998672 TCCAACGACCTAAAACAAATCGAT 59.001 37.500 0.00 0.00 36.64 3.59
2720 2748 5.086058 CCAACGACCTAAAACAAATCGATG 58.914 41.667 0.00 0.00 35.93 3.84
2721 2749 4.939509 ACGACCTAAAACAAATCGATGG 57.060 40.909 0.00 0.00 36.64 3.51
2722 2750 4.571919 ACGACCTAAAACAAATCGATGGA 58.428 39.130 0.00 0.00 36.64 3.41
2723 2751 4.390909 ACGACCTAAAACAAATCGATGGAC 59.609 41.667 0.00 0.00 36.64 4.02
2724 2752 4.630069 CGACCTAAAACAAATCGATGGACT 59.370 41.667 0.00 0.00 34.77 3.85
2725 2753 5.220416 CGACCTAAAACAAATCGATGGACTC 60.220 44.000 0.00 0.00 34.77 3.36
2726 2754 5.556915 ACCTAAAACAAATCGATGGACTCA 58.443 37.500 0.00 0.00 0.00 3.41
2727 2755 6.001460 ACCTAAAACAAATCGATGGACTCAA 58.999 36.000 0.00 0.00 0.00 3.02
2728 2756 6.488683 ACCTAAAACAAATCGATGGACTCAAA 59.511 34.615 0.00 0.00 0.00 2.69
2729 2757 7.176690 ACCTAAAACAAATCGATGGACTCAAAT 59.823 33.333 0.00 0.00 0.00 2.32
2730 2758 7.698130 CCTAAAACAAATCGATGGACTCAAATC 59.302 37.037 0.00 0.00 0.00 2.17
2731 2759 6.824305 AAACAAATCGATGGACTCAAATCT 57.176 33.333 0.00 0.00 0.00 2.40
2732 2760 6.824305 AACAAATCGATGGACTCAAATCTT 57.176 33.333 0.00 0.00 0.00 2.40
2733 2761 6.824305 ACAAATCGATGGACTCAAATCTTT 57.176 33.333 0.00 0.00 0.00 2.52
2734 2762 7.219484 ACAAATCGATGGACTCAAATCTTTT 57.781 32.000 0.00 0.00 0.00 2.27
2735 2763 7.661040 ACAAATCGATGGACTCAAATCTTTTT 58.339 30.769 0.00 0.00 0.00 1.94
2736 2764 7.809806 ACAAATCGATGGACTCAAATCTTTTTC 59.190 33.333 0.00 0.00 0.00 2.29
2737 2765 5.880054 TCGATGGACTCAAATCTTTTTCC 57.120 39.130 0.00 0.00 0.00 3.13
2738 2766 5.312895 TCGATGGACTCAAATCTTTTTCCA 58.687 37.500 0.00 0.00 0.00 3.53
2739 2767 5.945784 TCGATGGACTCAAATCTTTTTCCAT 59.054 36.000 0.50 0.50 39.17 3.41
2740 2768 6.032094 CGATGGACTCAAATCTTTTTCCATG 58.968 40.000 5.66 0.00 36.92 3.66
2741 2769 5.138125 TGGACTCAAATCTTTTTCCATGC 57.862 39.130 0.00 0.00 0.00 4.06
2742 2770 4.168760 GGACTCAAATCTTTTTCCATGCG 58.831 43.478 0.00 0.00 0.00 4.73
2743 2771 4.082787 GGACTCAAATCTTTTTCCATGCGA 60.083 41.667 0.00 0.00 0.00 5.10
2744 2772 4.798574 ACTCAAATCTTTTTCCATGCGAC 58.201 39.130 0.00 0.00 0.00 5.19
2745 2773 4.520492 ACTCAAATCTTTTTCCATGCGACT 59.480 37.500 0.00 0.00 0.00 4.18
2746 2774 4.797471 TCAAATCTTTTTCCATGCGACTG 58.203 39.130 0.00 0.00 0.00 3.51
2747 2775 4.278170 TCAAATCTTTTTCCATGCGACTGT 59.722 37.500 0.00 0.00 0.00 3.55
2748 2776 4.425577 AATCTTTTTCCATGCGACTGTC 57.574 40.909 0.00 0.00 0.00 3.51
2749 2777 2.844946 TCTTTTTCCATGCGACTGTCA 58.155 42.857 8.73 0.00 0.00 3.58
2750 2778 3.411446 TCTTTTTCCATGCGACTGTCAT 58.589 40.909 8.73 0.00 0.00 3.06
2751 2779 3.436704 TCTTTTTCCATGCGACTGTCATC 59.563 43.478 8.73 0.00 0.00 2.92
2752 2780 2.768253 TTTCCATGCGACTGTCATCT 57.232 45.000 8.73 0.00 0.00 2.90
2753 2781 3.885724 TTTCCATGCGACTGTCATCTA 57.114 42.857 8.73 0.00 0.00 1.98
2754 2782 3.443099 TTCCATGCGACTGTCATCTAG 57.557 47.619 8.73 0.00 0.00 2.43
2755 2783 1.067669 TCCATGCGACTGTCATCTAGC 59.932 52.381 8.73 3.26 0.00 3.42
2756 2784 1.495878 CATGCGACTGTCATCTAGCC 58.504 55.000 8.73 0.00 0.00 3.93
2757 2785 1.114627 ATGCGACTGTCATCTAGCCA 58.885 50.000 8.73 0.00 0.00 4.75
2758 2786 0.173481 TGCGACTGTCATCTAGCCAC 59.827 55.000 8.73 0.00 0.00 5.01
2759 2787 0.457851 GCGACTGTCATCTAGCCACT 59.542 55.000 8.73 0.00 0.00 4.00
2760 2788 1.535015 GCGACTGTCATCTAGCCACTC 60.535 57.143 8.73 0.00 0.00 3.51
2761 2789 1.066303 CGACTGTCATCTAGCCACTCC 59.934 57.143 8.73 0.00 0.00 3.85
2762 2790 1.410882 GACTGTCATCTAGCCACTCCC 59.589 57.143 2.24 0.00 0.00 4.30
2763 2791 1.007721 ACTGTCATCTAGCCACTCCCT 59.992 52.381 0.00 0.00 0.00 4.20
2764 2792 2.114616 CTGTCATCTAGCCACTCCCTT 58.885 52.381 0.00 0.00 0.00 3.95
2765 2793 2.102252 CTGTCATCTAGCCACTCCCTTC 59.898 54.545 0.00 0.00 0.00 3.46
2766 2794 1.067821 GTCATCTAGCCACTCCCTTCG 59.932 57.143 0.00 0.00 0.00 3.79
2767 2795 0.249657 CATCTAGCCACTCCCTTCGC 60.250 60.000 0.00 0.00 0.00 4.70
2768 2796 1.739338 ATCTAGCCACTCCCTTCGCG 61.739 60.000 0.00 0.00 0.00 5.87
2769 2797 2.678934 TAGCCACTCCCTTCGCGT 60.679 61.111 5.77 0.00 0.00 6.01
2770 2798 2.890847 CTAGCCACTCCCTTCGCGTG 62.891 65.000 5.77 0.00 0.00 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 1.067565 ACGATGATCGAGTGTGCAAGT 60.068 47.619 22.88 0.00 43.74 3.16
77 87 6.942976 TCTACACCCGATGAAGAGTAAATTT 58.057 36.000 0.00 0.00 0.00 1.82
86 96 2.546795 GGCTCATCTACACCCGATGAAG 60.547 54.545 4.52 1.42 44.62 3.02
271 287 1.909781 CTGCCAAGTGCCAACCCAT 60.910 57.895 0.00 0.00 40.16 4.00
272 288 2.521465 CTGCCAAGTGCCAACCCA 60.521 61.111 0.00 0.00 40.16 4.51
273 289 3.305516 CCTGCCAAGTGCCAACCC 61.306 66.667 0.00 0.00 40.16 4.11
274 290 3.305516 CCCTGCCAAGTGCCAACC 61.306 66.667 0.00 0.00 40.16 3.77
276 292 4.536526 TGCCCTGCCAAGTGCCAA 62.537 61.111 0.00 0.00 40.16 4.52
277 293 4.980702 CTGCCCTGCCAAGTGCCA 62.981 66.667 0.00 0.00 40.16 4.92
280 296 4.980702 TGCCTGCCCTGCCAAGTG 62.981 66.667 0.00 0.00 0.00 3.16
281 297 3.754586 TTTGCCTGCCCTGCCAAGT 62.755 57.895 0.00 0.00 0.00 3.16
282 298 2.444700 CTTTTGCCTGCCCTGCCAAG 62.445 60.000 0.00 0.00 0.00 3.61
300 316 3.049344 GTCCATAATGACCCTTCCCTCT 58.951 50.000 0.00 0.00 0.00 3.69
333 349 1.207811 CCCTTTTGAATGCCATGGACC 59.792 52.381 18.40 0.00 0.00 4.46
462 478 2.256156 TAGGAGAGGGAGGCATGGCA 62.256 60.000 22.64 0.00 0.00 4.92
530 546 1.668047 GCGGTTAGTTAGTGTGAGCGT 60.668 52.381 0.00 0.00 34.15 5.07
538 554 2.076863 AGTACGTCGCGGTTAGTTAGT 58.923 47.619 6.13 0.00 0.00 2.24
539 555 2.813779 AGTACGTCGCGGTTAGTTAG 57.186 50.000 6.13 0.00 0.00 2.34
564 580 0.454285 CTGTGGCAAATGTAACGGCG 60.454 55.000 4.80 4.80 0.00 6.46
590 606 2.271800 GAGGCAGTATATATGCACGGC 58.728 52.381 13.11 6.21 45.68 5.68
684 700 2.412112 CGGGGTAGCAGTCGTAGC 59.588 66.667 0.00 0.00 0.00 3.58
713 729 4.778415 TTCTGCTCTCGTCGGCGC 62.778 66.667 3.52 0.00 38.14 6.53
714 730 2.529005 TTCTTCTGCTCTCGTCGGCG 62.529 60.000 1.15 1.15 39.92 6.46
715 731 0.800300 CTTCTTCTGCTCTCGTCGGC 60.800 60.000 0.00 0.00 0.00 5.54
716 732 0.800300 GCTTCTTCTGCTCTCGTCGG 60.800 60.000 0.00 0.00 0.00 4.79
717 733 1.131037 CGCTTCTTCTGCTCTCGTCG 61.131 60.000 0.00 0.00 0.00 5.12
729 745 4.111375 TCTAGAATTCGCTTCGCTTCTT 57.889 40.909 0.00 0.00 38.98 2.52
994 1021 0.841961 TCCATGCTCCCCATCTCTTG 59.158 55.000 0.00 0.00 29.71 3.02
996 1023 1.406065 CGTCCATGCTCCCCATCTCT 61.406 60.000 0.00 0.00 29.71 3.10
1225 1252 4.161295 CCCGCTGGCGATCTCCAA 62.161 66.667 16.79 0.00 42.83 3.53
1569 1596 3.272364 TTGATCCAGCGGCAGCCTT 62.272 57.895 10.54 0.00 46.67 4.35
1677 1704 4.807039 GGCACGGCGTACATCGGT 62.807 66.667 14.22 0.72 40.26 4.69
1755 1782 1.135373 CAGTGCTAGAATGACGTCGGT 60.135 52.381 11.62 0.00 0.00 4.69
1977 2005 5.673337 TTGTTCCTTGAGTTCTTGATTCG 57.327 39.130 0.00 0.00 0.00 3.34
1979 2007 5.279156 GCCATTGTTCCTTGAGTTCTTGATT 60.279 40.000 0.00 0.00 0.00 2.57
1989 2017 1.538047 GAGCAGCCATTGTTCCTTGA 58.462 50.000 0.00 0.00 31.42 3.02
2003 2031 2.695127 AGAAGCTGATTGAGGAGCAG 57.305 50.000 0.00 0.00 44.59 4.24
2046 2074 2.572191 TGTACATTAGGAGGCGAACG 57.428 50.000 0.00 0.00 0.00 3.95
2084 2112 6.000246 TGGACATGCTATCCAGTTAAATGA 58.000 37.500 4.10 0.00 41.47 2.57
2094 2122 1.166531 GGCGGTTGGACATGCTATCC 61.167 60.000 0.00 0.00 36.70 2.59
2095 2123 1.166531 GGGCGGTTGGACATGCTATC 61.167 60.000 0.00 0.00 0.00 2.08
2096 2124 1.152963 GGGCGGTTGGACATGCTAT 60.153 57.895 0.00 0.00 0.00 2.97
2097 2125 2.270850 GGGCGGTTGGACATGCTA 59.729 61.111 0.00 0.00 0.00 3.49
2098 2126 4.740822 GGGGCGGTTGGACATGCT 62.741 66.667 0.00 0.00 0.00 3.79
2099 2127 4.740822 AGGGGCGGTTGGACATGC 62.741 66.667 0.00 0.00 0.00 4.06
2100 2128 2.438434 GAGGGGCGGTTGGACATG 60.438 66.667 0.00 0.00 0.00 3.21
2121 2149 4.624364 TGCTCACCACACCAGCCG 62.624 66.667 0.00 0.00 31.68 5.52
2122 2150 1.589716 GATTGCTCACCACACCAGCC 61.590 60.000 0.00 0.00 31.68 4.85
2123 2151 1.589716 GGATTGCTCACCACACCAGC 61.590 60.000 0.00 0.00 0.00 4.85
2124 2152 0.037303 AGGATTGCTCACCACACCAG 59.963 55.000 0.00 0.00 0.00 4.00
2125 2153 0.036732 GAGGATTGCTCACCACACCA 59.963 55.000 0.00 0.00 0.00 4.17
2126 2154 0.678048 GGAGGATTGCTCACCACACC 60.678 60.000 7.53 0.00 0.00 4.16
2127 2155 0.036732 TGGAGGATTGCTCACCACAC 59.963 55.000 7.53 0.00 0.00 3.82
2128 2156 0.770499 TTGGAGGATTGCTCACCACA 59.230 50.000 7.53 0.00 32.00 4.17
2129 2157 2.019984 GATTGGAGGATTGCTCACCAC 58.980 52.381 7.53 0.00 32.00 4.16
2130 2158 1.634973 TGATTGGAGGATTGCTCACCA 59.365 47.619 7.53 0.00 0.00 4.17
2131 2159 2.425143 TGATTGGAGGATTGCTCACC 57.575 50.000 7.53 0.00 0.00 4.02
2132 2160 3.548770 TGATGATTGGAGGATTGCTCAC 58.451 45.455 7.53 0.00 0.00 3.51
2133 2161 3.457012 TCTGATGATTGGAGGATTGCTCA 59.543 43.478 7.53 0.00 0.00 4.26
2134 2162 4.082665 TCTGATGATTGGAGGATTGCTC 57.917 45.455 0.00 0.00 0.00 4.26
2135 2163 4.515028 TTCTGATGATTGGAGGATTGCT 57.485 40.909 0.00 0.00 0.00 3.91
2136 2164 5.587388 TTTTCTGATGATTGGAGGATTGC 57.413 39.130 0.00 0.00 0.00 3.56
2137 2165 9.745880 CTAATTTTTCTGATGATTGGAGGATTG 57.254 33.333 0.00 0.00 0.00 2.67
2138 2166 9.705103 TCTAATTTTTCTGATGATTGGAGGATT 57.295 29.630 0.00 0.00 0.00 3.01
2139 2167 9.878737 ATCTAATTTTTCTGATGATTGGAGGAT 57.121 29.630 0.00 0.00 0.00 3.24
2157 2185 9.193806 ACTGGATTGAACATGCTTATCTAATTT 57.806 29.630 0.00 0.00 0.00 1.82
2158 2186 8.757982 ACTGGATTGAACATGCTTATCTAATT 57.242 30.769 0.00 0.00 0.00 1.40
2159 2187 8.757982 AACTGGATTGAACATGCTTATCTAAT 57.242 30.769 0.00 0.00 0.00 1.73
2160 2188 7.283127 GGAACTGGATTGAACATGCTTATCTAA 59.717 37.037 0.00 0.00 0.00 2.10
2161 2189 6.767902 GGAACTGGATTGAACATGCTTATCTA 59.232 38.462 0.00 0.00 0.00 1.98
2162 2190 5.591877 GGAACTGGATTGAACATGCTTATCT 59.408 40.000 0.00 0.00 0.00 1.98
2163 2191 5.357878 TGGAACTGGATTGAACATGCTTATC 59.642 40.000 0.00 0.00 0.00 1.75
2164 2192 5.263599 TGGAACTGGATTGAACATGCTTAT 58.736 37.500 0.00 0.00 0.00 1.73
2165 2193 4.661222 TGGAACTGGATTGAACATGCTTA 58.339 39.130 0.00 0.00 0.00 3.09
2166 2194 3.499338 TGGAACTGGATTGAACATGCTT 58.501 40.909 0.00 0.00 0.00 3.91
2174 2202 8.421249 AATTGTTTCTTATGGAACTGGATTGA 57.579 30.769 1.80 0.00 33.13 2.57
2185 2213 6.391227 AGCCGGAATAATTGTTTCTTATGG 57.609 37.500 5.05 0.00 0.00 2.74
2193 2221 4.142381 GCTCAAGAAGCCGGAATAATTGTT 60.142 41.667 5.05 0.00 45.92 2.83
2194 2222 3.378427 GCTCAAGAAGCCGGAATAATTGT 59.622 43.478 5.05 0.00 45.92 2.71
2216 2244 0.518636 GCATGCATGGCCGTACATAG 59.481 55.000 27.34 6.77 0.00 2.23
2269 2297 3.963428 AGCTATCGTGAACCAAGAACT 57.037 42.857 0.00 0.00 0.00 3.01
2271 2299 6.923508 CACATATAGCTATCGTGAACCAAGAA 59.076 38.462 22.85 0.00 0.00 2.52
2273 2301 6.447162 TCACATATAGCTATCGTGAACCAAG 58.553 40.000 25.56 8.08 33.86 3.61
2274 2302 6.399639 TCACATATAGCTATCGTGAACCAA 57.600 37.500 25.56 11.19 33.86 3.67
2280 2308 3.430008 CGGCTCACATATAGCTATCGTG 58.570 50.000 21.89 21.89 39.97 4.35
2281 2309 2.159366 GCGGCTCACATATAGCTATCGT 60.159 50.000 10.16 6.20 39.97 3.73
2282 2310 2.455032 GCGGCTCACATATAGCTATCG 58.545 52.381 10.16 6.18 39.97 2.92
2283 2311 2.428890 AGGCGGCTCACATATAGCTATC 59.571 50.000 10.16 0.00 39.97 2.08
2284 2312 2.167281 CAGGCGGCTCACATATAGCTAT 59.833 50.000 9.32 11.77 39.97 2.97
2285 2313 1.546029 CAGGCGGCTCACATATAGCTA 59.454 52.381 9.32 0.00 39.97 3.32
2286 2314 0.319728 CAGGCGGCTCACATATAGCT 59.680 55.000 9.32 0.00 39.97 3.32
2287 2315 0.318441 TCAGGCGGCTCACATATAGC 59.682 55.000 9.32 0.00 39.33 2.97
2288 2316 2.820059 TTCAGGCGGCTCACATATAG 57.180 50.000 9.32 0.00 0.00 1.31
2289 2317 3.769739 AATTCAGGCGGCTCACATATA 57.230 42.857 9.32 0.00 0.00 0.86
2290 2318 2.620115 CAAATTCAGGCGGCTCACATAT 59.380 45.455 9.32 0.00 0.00 1.78
2291 2319 2.016318 CAAATTCAGGCGGCTCACATA 58.984 47.619 9.32 0.00 0.00 2.29
2292 2320 0.813184 CAAATTCAGGCGGCTCACAT 59.187 50.000 9.32 0.00 0.00 3.21
2293 2321 1.865788 GCAAATTCAGGCGGCTCACA 61.866 55.000 9.32 0.00 0.00 3.58
2294 2322 1.153958 GCAAATTCAGGCGGCTCAC 60.154 57.895 9.32 0.00 0.00 3.51
2295 2323 1.177895 TTGCAAATTCAGGCGGCTCA 61.178 50.000 9.32 0.00 0.00 4.26
2296 2324 0.174162 ATTGCAAATTCAGGCGGCTC 59.826 50.000 9.32 0.00 0.00 4.70
2297 2325 1.473258 TATTGCAAATTCAGGCGGCT 58.527 45.000 5.25 5.25 0.00 5.52
2298 2326 2.129607 CATATTGCAAATTCAGGCGGC 58.870 47.619 1.71 0.00 0.00 6.53
2299 2327 2.546373 CCCATATTGCAAATTCAGGCGG 60.546 50.000 1.71 0.00 0.00 6.13
2300 2328 2.101249 ACCCATATTGCAAATTCAGGCG 59.899 45.455 1.71 0.00 0.00 5.52
2301 2329 3.132646 TCACCCATATTGCAAATTCAGGC 59.867 43.478 1.71 0.00 0.00 4.85
2302 2330 4.403432 ACTCACCCATATTGCAAATTCAGG 59.597 41.667 1.71 3.71 0.00 3.86
2303 2331 5.585390 GACTCACCCATATTGCAAATTCAG 58.415 41.667 1.71 0.00 0.00 3.02
2304 2332 4.096231 CGACTCACCCATATTGCAAATTCA 59.904 41.667 1.71 0.00 0.00 2.57
2305 2333 4.335315 TCGACTCACCCATATTGCAAATTC 59.665 41.667 1.71 0.00 0.00 2.17
2306 2334 4.269183 TCGACTCACCCATATTGCAAATT 58.731 39.130 1.71 0.00 0.00 1.82
2307 2335 3.884895 TCGACTCACCCATATTGCAAAT 58.115 40.909 1.71 0.00 0.00 2.32
2308 2336 3.342377 TCGACTCACCCATATTGCAAA 57.658 42.857 1.71 0.00 0.00 3.68
2309 2337 3.558931 ATCGACTCACCCATATTGCAA 57.441 42.857 0.00 0.00 0.00 4.08
2310 2338 3.558931 AATCGACTCACCCATATTGCA 57.441 42.857 0.00 0.00 0.00 4.08
2311 2339 4.900635 AAAATCGACTCACCCATATTGC 57.099 40.909 0.00 0.00 0.00 3.56
2312 2340 5.356751 TCCAAAAATCGACTCACCCATATTG 59.643 40.000 0.00 0.00 0.00 1.90
2313 2341 5.505780 TCCAAAAATCGACTCACCCATATT 58.494 37.500 0.00 0.00 0.00 1.28
2314 2342 5.110814 TCCAAAAATCGACTCACCCATAT 57.889 39.130 0.00 0.00 0.00 1.78
2315 2343 4.561500 TCCAAAAATCGACTCACCCATA 57.438 40.909 0.00 0.00 0.00 2.74
2316 2344 3.433306 TCCAAAAATCGACTCACCCAT 57.567 42.857 0.00 0.00 0.00 4.00
2317 2345 2.940994 TCCAAAAATCGACTCACCCA 57.059 45.000 0.00 0.00 0.00 4.51
2318 2346 3.408634 TCTTCCAAAAATCGACTCACCC 58.591 45.455 0.00 0.00 0.00 4.61
2319 2347 3.437049 CCTCTTCCAAAAATCGACTCACC 59.563 47.826 0.00 0.00 0.00 4.02
2320 2348 4.315803 TCCTCTTCCAAAAATCGACTCAC 58.684 43.478 0.00 0.00 0.00 3.51
2321 2349 4.617253 TCCTCTTCCAAAAATCGACTCA 57.383 40.909 0.00 0.00 0.00 3.41
2322 2350 5.238583 TCTTCCTCTTCCAAAAATCGACTC 58.761 41.667 0.00 0.00 0.00 3.36
2323 2351 5.228945 TCTTCCTCTTCCAAAAATCGACT 57.771 39.130 0.00 0.00 0.00 4.18
2324 2352 5.941948 TTCTTCCTCTTCCAAAAATCGAC 57.058 39.130 0.00 0.00 0.00 4.20
2325 2353 7.230510 TGAATTTCTTCCTCTTCCAAAAATCGA 59.769 33.333 0.00 0.00 0.00 3.59
2326 2354 7.370383 TGAATTTCTTCCTCTTCCAAAAATCG 58.630 34.615 0.00 0.00 0.00 3.34
2327 2355 9.363763 GATGAATTTCTTCCTCTTCCAAAAATC 57.636 33.333 0.00 0.00 0.00 2.17
2328 2356 8.031277 CGATGAATTTCTTCCTCTTCCAAAAAT 58.969 33.333 6.69 0.00 0.00 1.82
2329 2357 7.370383 CGATGAATTTCTTCCTCTTCCAAAAA 58.630 34.615 6.69 0.00 0.00 1.94
2330 2358 6.071952 CCGATGAATTTCTTCCTCTTCCAAAA 60.072 38.462 6.69 0.00 0.00 2.44
2331 2359 5.415701 CCGATGAATTTCTTCCTCTTCCAAA 59.584 40.000 6.69 0.00 0.00 3.28
2332 2360 4.943705 CCGATGAATTTCTTCCTCTTCCAA 59.056 41.667 6.69 0.00 0.00 3.53
2333 2361 4.225042 TCCGATGAATTTCTTCCTCTTCCA 59.775 41.667 6.69 0.00 0.00 3.53
2334 2362 4.770795 TCCGATGAATTTCTTCCTCTTCC 58.229 43.478 6.69 0.00 0.00 3.46
2335 2363 5.295540 CCTTCCGATGAATTTCTTCCTCTTC 59.704 44.000 6.69 0.00 0.00 2.87
2336 2364 5.045578 TCCTTCCGATGAATTTCTTCCTCTT 60.046 40.000 6.69 0.00 0.00 2.85
2337 2365 4.471386 TCCTTCCGATGAATTTCTTCCTCT 59.529 41.667 6.69 0.00 0.00 3.69
2338 2366 4.770795 TCCTTCCGATGAATTTCTTCCTC 58.229 43.478 6.69 0.00 0.00 3.71
2339 2367 4.844349 TCCTTCCGATGAATTTCTTCCT 57.156 40.909 6.69 0.00 0.00 3.36
2340 2368 4.336713 CCTTCCTTCCGATGAATTTCTTCC 59.663 45.833 6.69 0.00 0.00 3.46
2341 2369 5.186198 TCCTTCCTTCCGATGAATTTCTTC 58.814 41.667 0.00 0.36 0.00 2.87
2342 2370 5.179452 TCCTTCCTTCCGATGAATTTCTT 57.821 39.130 0.00 0.00 0.00 2.52
2343 2371 4.844349 TCCTTCCTTCCGATGAATTTCT 57.156 40.909 0.00 0.00 0.00 2.52
2344 2372 4.336713 CCTTCCTTCCTTCCGATGAATTTC 59.663 45.833 0.00 0.00 0.00 2.17
2345 2373 4.273318 CCTTCCTTCCTTCCGATGAATTT 58.727 43.478 0.00 0.00 0.00 1.82
2346 2374 3.372025 CCCTTCCTTCCTTCCGATGAATT 60.372 47.826 0.00 0.00 0.00 2.17
2347 2375 2.173569 CCCTTCCTTCCTTCCGATGAAT 59.826 50.000 0.00 0.00 0.00 2.57
2348 2376 1.559682 CCCTTCCTTCCTTCCGATGAA 59.440 52.381 0.00 0.00 0.00 2.57
2349 2377 1.204146 CCCTTCCTTCCTTCCGATGA 58.796 55.000 0.00 0.00 0.00 2.92
2350 2378 1.204146 TCCCTTCCTTCCTTCCGATG 58.796 55.000 0.00 0.00 0.00 3.84
2351 2379 1.771255 CATCCCTTCCTTCCTTCCGAT 59.229 52.381 0.00 0.00 0.00 4.18
2352 2380 1.204146 CATCCCTTCCTTCCTTCCGA 58.796 55.000 0.00 0.00 0.00 4.55
2353 2381 1.204146 TCATCCCTTCCTTCCTTCCG 58.796 55.000 0.00 0.00 0.00 4.30
2354 2382 2.092158 CCTTCATCCCTTCCTTCCTTCC 60.092 54.545 0.00 0.00 0.00 3.46
2355 2383 2.846827 TCCTTCATCCCTTCCTTCCTTC 59.153 50.000 0.00 0.00 0.00 3.46
2356 2384 2.934722 TCCTTCATCCCTTCCTTCCTT 58.065 47.619 0.00 0.00 0.00 3.36
2357 2385 2.668850 TCCTTCATCCCTTCCTTCCT 57.331 50.000 0.00 0.00 0.00 3.36
2358 2386 2.092158 CCTTCCTTCATCCCTTCCTTCC 60.092 54.545 0.00 0.00 0.00 3.46
2359 2387 2.846827 TCCTTCCTTCATCCCTTCCTTC 59.153 50.000 0.00 0.00 0.00 3.46
2360 2388 2.849318 CTCCTTCCTTCATCCCTTCCTT 59.151 50.000 0.00 0.00 0.00 3.36
2361 2389 2.486716 CTCCTTCCTTCATCCCTTCCT 58.513 52.381 0.00 0.00 0.00 3.36
2362 2390 1.133945 GCTCCTTCCTTCATCCCTTCC 60.134 57.143 0.00 0.00 0.00 3.46
2363 2391 1.561542 TGCTCCTTCCTTCATCCCTTC 59.438 52.381 0.00 0.00 0.00 3.46
2364 2392 1.563410 CTGCTCCTTCCTTCATCCCTT 59.437 52.381 0.00 0.00 0.00 3.95
2365 2393 1.211456 CTGCTCCTTCCTTCATCCCT 58.789 55.000 0.00 0.00 0.00 4.20
2366 2394 0.465278 GCTGCTCCTTCCTTCATCCC 60.465 60.000 0.00 0.00 0.00 3.85
2367 2395 0.465278 GGCTGCTCCTTCCTTCATCC 60.465 60.000 0.00 0.00 0.00 3.51
2368 2396 0.254178 TGGCTGCTCCTTCCTTCATC 59.746 55.000 0.00 0.00 35.26 2.92
2369 2397 0.924823 ATGGCTGCTCCTTCCTTCAT 59.075 50.000 0.00 0.00 35.26 2.57
2370 2398 0.254178 GATGGCTGCTCCTTCCTTCA 59.746 55.000 0.00 0.00 33.98 3.02
2371 2399 0.813210 CGATGGCTGCTCCTTCCTTC 60.813 60.000 0.00 0.00 36.04 3.46
2372 2400 1.222936 CGATGGCTGCTCCTTCCTT 59.777 57.895 0.00 0.00 36.04 3.36
2373 2401 2.739996 CCGATGGCTGCTCCTTCCT 61.740 63.158 0.00 0.00 36.04 3.36
2374 2402 2.203126 CCGATGGCTGCTCCTTCC 60.203 66.667 0.00 0.00 36.04 3.46
2375 2403 2.899339 GCCGATGGCTGCTCCTTC 60.899 66.667 0.00 0.00 46.69 3.46
2384 2412 2.480416 CCTAAGATAGATCGCCGATGGC 60.480 54.545 3.34 0.00 46.75 4.40
2385 2413 2.099921 CCCTAAGATAGATCGCCGATGG 59.900 54.545 3.34 0.00 0.00 3.51
2386 2414 2.755655 ACCCTAAGATAGATCGCCGATG 59.244 50.000 3.34 0.00 0.00 3.84
2387 2415 2.755655 CACCCTAAGATAGATCGCCGAT 59.244 50.000 0.00 0.00 0.00 4.18
2388 2416 2.160205 CACCCTAAGATAGATCGCCGA 58.840 52.381 0.00 0.00 0.00 5.54
2389 2417 1.202582 CCACCCTAAGATAGATCGCCG 59.797 57.143 0.00 0.00 0.00 6.46
2390 2418 1.066787 GCCACCCTAAGATAGATCGCC 60.067 57.143 0.00 0.00 0.00 5.54
2391 2419 1.618837 TGCCACCCTAAGATAGATCGC 59.381 52.381 0.00 0.00 0.00 4.58
2392 2420 2.232452 CCTGCCACCCTAAGATAGATCG 59.768 54.545 0.00 0.00 0.00 3.69
2393 2421 2.027653 GCCTGCCACCCTAAGATAGATC 60.028 54.545 0.00 0.00 0.00 2.75
2394 2422 1.981495 GCCTGCCACCCTAAGATAGAT 59.019 52.381 0.00 0.00 0.00 1.98
2395 2423 1.062121 AGCCTGCCACCCTAAGATAGA 60.062 52.381 0.00 0.00 0.00 1.98
2396 2424 1.346068 GAGCCTGCCACCCTAAGATAG 59.654 57.143 0.00 0.00 0.00 2.08
2397 2425 1.424638 GAGCCTGCCACCCTAAGATA 58.575 55.000 0.00 0.00 0.00 1.98
2398 2426 1.690219 CGAGCCTGCCACCCTAAGAT 61.690 60.000 0.00 0.00 0.00 2.40
2399 2427 2.359169 CGAGCCTGCCACCCTAAGA 61.359 63.158 0.00 0.00 0.00 2.10
2400 2428 2.187946 CGAGCCTGCCACCCTAAG 59.812 66.667 0.00 0.00 0.00 2.18
2401 2429 2.606519 ACGAGCCTGCCACCCTAA 60.607 61.111 0.00 0.00 0.00 2.69
2402 2430 3.075005 GACGAGCCTGCCACCCTA 61.075 66.667 0.00 0.00 0.00 3.53
2416 2444 2.222445 CCCCTAAAATAAATCGCCGACG 59.778 50.000 0.00 0.00 42.01 5.12
2417 2445 3.002965 CACCCCTAAAATAAATCGCCGAC 59.997 47.826 0.00 0.00 0.00 4.79
2418 2446 3.207778 CACCCCTAAAATAAATCGCCGA 58.792 45.455 0.00 0.00 0.00 5.54
2419 2447 2.292292 CCACCCCTAAAATAAATCGCCG 59.708 50.000 0.00 0.00 0.00 6.46
2420 2448 2.626266 CCCACCCCTAAAATAAATCGCC 59.374 50.000 0.00 0.00 0.00 5.54
2421 2449 2.626266 CCCCACCCCTAAAATAAATCGC 59.374 50.000 0.00 0.00 0.00 4.58
2422 2450 3.227614 CCCCCACCCCTAAAATAAATCG 58.772 50.000 0.00 0.00 0.00 3.34
2445 2473 3.499737 GACGAACCTGCATGCCCG 61.500 66.667 16.68 12.81 0.00 6.13
2446 2474 3.499737 CGACGAACCTGCATGCCC 61.500 66.667 16.68 0.00 0.00 5.36
2447 2475 1.573829 TTTCGACGAACCTGCATGCC 61.574 55.000 16.68 0.00 0.00 4.40
2448 2476 0.237235 TTTTCGACGAACCTGCATGC 59.763 50.000 11.82 11.82 0.00 4.06
2449 2477 2.900122 ATTTTCGACGAACCTGCATG 57.100 45.000 10.38 0.00 0.00 4.06
2450 2478 3.915437 AAATTTTCGACGAACCTGCAT 57.085 38.095 10.38 0.00 0.00 3.96
2451 2479 3.701532 AAAATTTTCGACGAACCTGCA 57.298 38.095 10.38 0.00 0.00 4.41
2452 2480 3.794564 ACAAAAATTTTCGACGAACCTGC 59.205 39.130 10.38 0.00 0.00 4.85
2453 2481 5.051973 GGAACAAAAATTTTCGACGAACCTG 60.052 40.000 10.38 4.33 0.00 4.00
2454 2482 5.038683 GGAACAAAAATTTTCGACGAACCT 58.961 37.500 10.38 0.00 0.00 3.50
2455 2483 5.038683 AGGAACAAAAATTTTCGACGAACC 58.961 37.500 10.38 4.18 0.00 3.62
2456 2484 5.740099 TGAGGAACAAAAATTTTCGACGAAC 59.260 36.000 10.38 0.00 0.00 3.95
2457 2485 5.881447 TGAGGAACAAAAATTTTCGACGAA 58.119 33.333 6.10 6.10 0.00 3.85
2458 2486 5.487153 TGAGGAACAAAAATTTTCGACGA 57.513 34.783 3.41 0.00 0.00 4.20
2459 2487 5.058008 CGATGAGGAACAAAAATTTTCGACG 59.942 40.000 3.41 0.00 0.00 5.12
2460 2488 5.342259 CCGATGAGGAACAAAAATTTTCGAC 59.658 40.000 3.41 0.00 45.00 4.20
2461 2489 5.457140 CCGATGAGGAACAAAAATTTTCGA 58.543 37.500 3.41 0.00 45.00 3.71
2462 2490 4.621034 CCCGATGAGGAACAAAAATTTTCG 59.379 41.667 3.41 0.00 45.00 3.46
2463 2491 5.538118 ACCCGATGAGGAACAAAAATTTTC 58.462 37.500 3.41 0.00 45.00 2.29
2464 2492 5.545063 ACCCGATGAGGAACAAAAATTTT 57.455 34.783 0.00 0.00 45.00 1.82
2465 2493 5.545063 AACCCGATGAGGAACAAAAATTT 57.455 34.783 0.00 0.00 45.00 1.82
2466 2494 6.007703 TCTAACCCGATGAGGAACAAAAATT 58.992 36.000 0.00 0.00 45.00 1.82
2467 2495 5.566469 TCTAACCCGATGAGGAACAAAAAT 58.434 37.500 0.00 0.00 45.00 1.82
2468 2496 4.975631 TCTAACCCGATGAGGAACAAAAA 58.024 39.130 0.00 0.00 45.00 1.94
2469 2497 4.575885 CTCTAACCCGATGAGGAACAAAA 58.424 43.478 0.00 0.00 45.00 2.44
2470 2498 4.202245 CTCTAACCCGATGAGGAACAAA 57.798 45.455 0.00 0.00 45.00 2.83
2471 2499 3.887621 CTCTAACCCGATGAGGAACAA 57.112 47.619 0.00 0.00 45.00 2.83
2476 2504 1.620819 CATCCCTCTAACCCGATGAGG 59.379 57.143 0.00 0.00 45.02 3.86
2477 2505 1.620819 CCATCCCTCTAACCCGATGAG 59.379 57.143 0.00 0.00 35.21 2.90
2478 2506 1.062428 ACCATCCCTCTAACCCGATGA 60.062 52.381 0.00 0.00 35.21 2.92
2479 2507 1.344763 GACCATCCCTCTAACCCGATG 59.655 57.143 0.00 0.00 33.42 3.84
2480 2508 1.718280 GACCATCCCTCTAACCCGAT 58.282 55.000 0.00 0.00 0.00 4.18
2481 2509 0.754217 CGACCATCCCTCTAACCCGA 60.754 60.000 0.00 0.00 0.00 5.14
2482 2510 1.041447 ACGACCATCCCTCTAACCCG 61.041 60.000 0.00 0.00 0.00 5.28
2483 2511 0.464452 CACGACCATCCCTCTAACCC 59.536 60.000 0.00 0.00 0.00 4.11
2484 2512 0.464452 CCACGACCATCCCTCTAACC 59.536 60.000 0.00 0.00 0.00 2.85
2485 2513 0.464452 CCCACGACCATCCCTCTAAC 59.536 60.000 0.00 0.00 0.00 2.34
2486 2514 0.042131 ACCCACGACCATCCCTCTAA 59.958 55.000 0.00 0.00 0.00 2.10
2487 2515 0.686441 CACCCACGACCATCCCTCTA 60.686 60.000 0.00 0.00 0.00 2.43
2488 2516 1.990060 CACCCACGACCATCCCTCT 60.990 63.158 0.00 0.00 0.00 3.69
2489 2517 2.584608 CACCCACGACCATCCCTC 59.415 66.667 0.00 0.00 0.00 4.30
2490 2518 3.009115 CCACCCACGACCATCCCT 61.009 66.667 0.00 0.00 0.00 4.20
2491 2519 4.796495 GCCACCCACGACCATCCC 62.796 72.222 0.00 0.00 0.00 3.85
2493 2521 4.388499 ACGCCACCCACGACCATC 62.388 66.667 0.00 0.00 0.00 3.51
2494 2522 4.388499 GACGCCACCCACGACCAT 62.388 66.667 0.00 0.00 0.00 3.55
2509 2537 4.295119 ACCCACCGTCGTGCTGAC 62.295 66.667 0.00 0.20 44.53 3.51
2510 2538 4.293648 CACCCACCGTCGTGCTGA 62.294 66.667 0.00 0.00 38.79 4.26
2511 2539 3.589654 ATCACCCACCGTCGTGCTG 62.590 63.158 0.00 0.00 38.79 4.41
2512 2540 3.311110 ATCACCCACCGTCGTGCT 61.311 61.111 0.00 0.00 38.79 4.40
2513 2541 3.118454 CATCACCCACCGTCGTGC 61.118 66.667 0.00 0.00 38.79 5.34
2514 2542 2.434185 CCATCACCCACCGTCGTG 60.434 66.667 0.00 0.00 39.91 4.35
2515 2543 2.513259 AACCATCACCCACCGTCGT 61.513 57.895 0.00 0.00 0.00 4.34
2516 2544 2.032634 CAACCATCACCCACCGTCG 61.033 63.158 0.00 0.00 0.00 5.12
2517 2545 1.674322 CCAACCATCACCCACCGTC 60.674 63.158 0.00 0.00 0.00 4.79
2518 2546 2.434331 CCAACCATCACCCACCGT 59.566 61.111 0.00 0.00 0.00 4.83
2519 2547 2.361104 CCCAACCATCACCCACCG 60.361 66.667 0.00 0.00 0.00 4.94
2520 2548 2.037208 CCCCAACCATCACCCACC 59.963 66.667 0.00 0.00 0.00 4.61
2521 2549 1.000896 CTCCCCAACCATCACCCAC 60.001 63.158 0.00 0.00 0.00 4.61
2522 2550 2.237965 CCTCCCCAACCATCACCCA 61.238 63.158 0.00 0.00 0.00 4.51
2523 2551 1.926426 CTCCTCCCCAACCATCACCC 61.926 65.000 0.00 0.00 0.00 4.61
2524 2552 1.609783 CTCCTCCCCAACCATCACC 59.390 63.158 0.00 0.00 0.00 4.02
2525 2553 1.609783 CCTCCTCCCCAACCATCAC 59.390 63.158 0.00 0.00 0.00 3.06
2526 2554 1.619363 CCCTCCTCCCCAACCATCA 60.619 63.158 0.00 0.00 0.00 3.07
2527 2555 3.061905 GCCCTCCTCCCCAACCATC 62.062 68.421 0.00 0.00 0.00 3.51
2528 2556 3.023735 GCCCTCCTCCCCAACCAT 61.024 66.667 0.00 0.00 0.00 3.55
2558 2586 4.827087 ACGATGCTCCTGCGCCTG 62.827 66.667 4.18 0.00 43.34 4.85
2559 2587 4.521062 GACGATGCTCCTGCGCCT 62.521 66.667 4.18 0.00 43.34 5.52
2560 2588 4.819761 TGACGATGCTCCTGCGCC 62.820 66.667 4.18 0.00 43.34 6.53
2561 2589 3.260483 CTGACGATGCTCCTGCGC 61.260 66.667 0.00 0.00 43.34 6.09
2562 2590 3.260483 GCTGACGATGCTCCTGCG 61.260 66.667 0.00 0.00 43.34 5.18
2563 2591 2.125391 TGCTGACGATGCTCCTGC 60.125 61.111 0.00 0.00 40.20 4.85
2564 2592 2.172372 GCTGCTGACGATGCTCCTG 61.172 63.158 0.00 0.00 0.00 3.86
2565 2593 2.186384 GCTGCTGACGATGCTCCT 59.814 61.111 0.00 0.00 0.00 3.69
2566 2594 3.260483 CGCTGCTGACGATGCTCC 61.260 66.667 0.00 0.00 0.00 4.70
2567 2595 3.260483 CCGCTGCTGACGATGCTC 61.260 66.667 0.00 0.00 0.00 4.26
2568 2596 4.827087 CCCGCTGCTGACGATGCT 62.827 66.667 0.00 0.00 0.00 3.79
2587 2615 4.114997 CAACCGCCCGTTGCCATC 62.115 66.667 0.00 0.00 45.16 3.51
2600 2628 2.439519 CATACCACCGGCCCAACC 60.440 66.667 0.00 0.00 0.00 3.77
2601 2629 1.747745 GACATACCACCGGCCCAAC 60.748 63.158 0.00 0.00 0.00 3.77
2602 2630 2.672295 GACATACCACCGGCCCAA 59.328 61.111 0.00 0.00 0.00 4.12
2603 2631 3.776781 CGACATACCACCGGCCCA 61.777 66.667 0.00 0.00 0.00 5.36
2604 2632 4.540735 CCGACATACCACCGGCCC 62.541 72.222 0.00 0.00 36.62 5.80
2605 2633 4.540735 CCCGACATACCACCGGCC 62.541 72.222 0.00 0.00 41.74 6.13
2607 2635 4.884257 CGCCCGACATACCACCGG 62.884 72.222 0.00 0.00 42.64 5.28
2608 2636 4.884257 CCGCCCGACATACCACCG 62.884 72.222 0.00 0.00 0.00 4.94
2609 2637 2.808181 AAACCGCCCGACATACCACC 62.808 60.000 0.00 0.00 0.00 4.61
2610 2638 1.376295 AAACCGCCCGACATACCAC 60.376 57.895 0.00 0.00 0.00 4.16
2611 2639 1.376166 CAAACCGCCCGACATACCA 60.376 57.895 0.00 0.00 0.00 3.25
2612 2640 1.078988 TCAAACCGCCCGACATACC 60.079 57.895 0.00 0.00 0.00 2.73
2613 2641 0.390735 ACTCAAACCGCCCGACATAC 60.391 55.000 0.00 0.00 0.00 2.39
2614 2642 1.184431 TACTCAAACCGCCCGACATA 58.816 50.000 0.00 0.00 0.00 2.29
2615 2643 0.322322 TTACTCAAACCGCCCGACAT 59.678 50.000 0.00 0.00 0.00 3.06
2616 2644 0.106335 TTTACTCAAACCGCCCGACA 59.894 50.000 0.00 0.00 0.00 4.35
2617 2645 1.228533 TTTTACTCAAACCGCCCGAC 58.771 50.000 0.00 0.00 0.00 4.79
2618 2646 1.874872 CTTTTTACTCAAACCGCCCGA 59.125 47.619 0.00 0.00 0.00 5.14
2619 2647 1.874872 TCTTTTTACTCAAACCGCCCG 59.125 47.619 0.00 0.00 0.00 6.13
2620 2648 3.504520 TCATCTTTTTACTCAAACCGCCC 59.495 43.478 0.00 0.00 0.00 6.13
2621 2649 4.759516 TCATCTTTTTACTCAAACCGCC 57.240 40.909 0.00 0.00 0.00 6.13
2622 2650 5.516090 TGTTCATCTTTTTACTCAAACCGC 58.484 37.500 0.00 0.00 0.00 5.68
2623 2651 7.979115 TTTGTTCATCTTTTTACTCAAACCG 57.021 32.000 0.00 0.00 0.00 4.44
2624 2652 9.581099 TCTTTTGTTCATCTTTTTACTCAAACC 57.419 29.630 0.00 0.00 0.00 3.27
2630 2658 9.546428 CCCAAATCTTTTGTTCATCTTTTTACT 57.454 29.630 0.00 0.00 0.00 2.24
2631 2659 8.282592 GCCCAAATCTTTTGTTCATCTTTTTAC 58.717 33.333 0.00 0.00 0.00 2.01
2632 2660 8.210265 AGCCCAAATCTTTTGTTCATCTTTTTA 58.790 29.630 0.00 0.00 0.00 1.52
2633 2661 7.056006 AGCCCAAATCTTTTGTTCATCTTTTT 58.944 30.769 0.00 0.00 0.00 1.94
2634 2662 6.594744 AGCCCAAATCTTTTGTTCATCTTTT 58.405 32.000 0.00 0.00 0.00 2.27
2635 2663 6.178607 AGCCCAAATCTTTTGTTCATCTTT 57.821 33.333 0.00 0.00 0.00 2.52
2636 2664 5.813513 AGCCCAAATCTTTTGTTCATCTT 57.186 34.783 0.00 0.00 0.00 2.40
2637 2665 6.248433 TCTAGCCCAAATCTTTTGTTCATCT 58.752 36.000 0.00 0.00 0.00 2.90
2638 2666 6.405176 CCTCTAGCCCAAATCTTTTGTTCATC 60.405 42.308 0.00 0.00 0.00 2.92
2639 2667 5.420104 CCTCTAGCCCAAATCTTTTGTTCAT 59.580 40.000 0.00 0.00 0.00 2.57
2640 2668 4.766891 CCTCTAGCCCAAATCTTTTGTTCA 59.233 41.667 0.00 0.00 0.00 3.18
2641 2669 4.767409 ACCTCTAGCCCAAATCTTTTGTTC 59.233 41.667 0.00 0.00 0.00 3.18
2642 2670 4.740902 ACCTCTAGCCCAAATCTTTTGTT 58.259 39.130 0.00 0.00 0.00 2.83
2643 2671 4.388577 ACCTCTAGCCCAAATCTTTTGT 57.611 40.909 0.00 0.00 0.00 2.83
2644 2672 4.766891 TCAACCTCTAGCCCAAATCTTTTG 59.233 41.667 0.00 0.00 0.00 2.44
2645 2673 4.998051 TCAACCTCTAGCCCAAATCTTTT 58.002 39.130 0.00 0.00 0.00 2.27
2646 2674 4.657814 TCAACCTCTAGCCCAAATCTTT 57.342 40.909 0.00 0.00 0.00 2.52
2647 2675 4.289672 TCTTCAACCTCTAGCCCAAATCTT 59.710 41.667 0.00 0.00 0.00 2.40
2648 2676 3.846588 TCTTCAACCTCTAGCCCAAATCT 59.153 43.478 0.00 0.00 0.00 2.40
2649 2677 4.222124 TCTTCAACCTCTAGCCCAAATC 57.778 45.455 0.00 0.00 0.00 2.17
2650 2678 4.657814 TTCTTCAACCTCTAGCCCAAAT 57.342 40.909 0.00 0.00 0.00 2.32
2651 2679 4.104102 TCTTTCTTCAACCTCTAGCCCAAA 59.896 41.667 0.00 0.00 0.00 3.28
2652 2680 3.650942 TCTTTCTTCAACCTCTAGCCCAA 59.349 43.478 0.00 0.00 0.00 4.12
2653 2681 3.248024 TCTTTCTTCAACCTCTAGCCCA 58.752 45.455 0.00 0.00 0.00 5.36
2654 2682 3.983044 TCTTTCTTCAACCTCTAGCCC 57.017 47.619 0.00 0.00 0.00 5.19
2676 2704 9.663904 CGTTGGATGAAAAATGAACGATTATAT 57.336 29.630 0.00 0.00 38.71 0.86
2677 2705 8.884726 TCGTTGGATGAAAAATGAACGATTATA 58.115 29.630 0.00 0.00 39.98 0.98
2678 2706 7.696453 GTCGTTGGATGAAAAATGAACGATTAT 59.304 33.333 0.00 0.00 44.69 1.28
2679 2707 7.018826 GTCGTTGGATGAAAAATGAACGATTA 58.981 34.615 0.00 0.00 44.69 1.75
2680 2708 5.856455 GTCGTTGGATGAAAAATGAACGATT 59.144 36.000 0.00 0.00 44.69 3.34
2681 2709 5.390613 GTCGTTGGATGAAAAATGAACGAT 58.609 37.500 0.00 0.00 44.69 3.73
2682 2710 4.319911 GGTCGTTGGATGAAAAATGAACGA 60.320 41.667 0.00 0.00 41.91 3.85
2683 2711 3.911964 GGTCGTTGGATGAAAAATGAACG 59.088 43.478 0.00 0.00 37.98 3.95
2684 2712 5.121221 AGGTCGTTGGATGAAAAATGAAC 57.879 39.130 0.00 0.00 30.56 3.18
2685 2713 6.885952 TTAGGTCGTTGGATGAAAAATGAA 57.114 33.333 0.00 0.00 0.00 2.57
2686 2714 6.885952 TTTAGGTCGTTGGATGAAAAATGA 57.114 33.333 0.00 0.00 0.00 2.57
2687 2715 6.920758 TGTTTTAGGTCGTTGGATGAAAAATG 59.079 34.615 0.00 0.00 0.00 2.32
2688 2716 7.045126 TGTTTTAGGTCGTTGGATGAAAAAT 57.955 32.000 0.00 0.00 0.00 1.82
2689 2717 6.452494 TGTTTTAGGTCGTTGGATGAAAAA 57.548 33.333 0.00 0.00 0.00 1.94
2690 2718 6.452494 TTGTTTTAGGTCGTTGGATGAAAA 57.548 33.333 0.00 0.00 0.00 2.29
2691 2719 6.452494 TTTGTTTTAGGTCGTTGGATGAAA 57.548 33.333 0.00 0.00 0.00 2.69
2692 2720 6.566942 CGATTTGTTTTAGGTCGTTGGATGAA 60.567 38.462 0.00 0.00 0.00 2.57
2693 2721 5.106869 CGATTTGTTTTAGGTCGTTGGATGA 60.107 40.000 0.00 0.00 0.00 2.92
2694 2722 5.086058 CGATTTGTTTTAGGTCGTTGGATG 58.914 41.667 0.00 0.00 0.00 3.51
2695 2723 4.998672 TCGATTTGTTTTAGGTCGTTGGAT 59.001 37.500 0.00 0.00 34.24 3.41
2696 2724 4.378774 TCGATTTGTTTTAGGTCGTTGGA 58.621 39.130 0.00 0.00 34.24 3.53
2697 2725 4.735662 TCGATTTGTTTTAGGTCGTTGG 57.264 40.909 0.00 0.00 34.24 3.77
2698 2726 5.086058 CCATCGATTTGTTTTAGGTCGTTG 58.914 41.667 0.00 0.00 33.93 4.10
2699 2727 4.998672 TCCATCGATTTGTTTTAGGTCGTT 59.001 37.500 0.00 0.00 34.24 3.85
2700 2728 4.390909 GTCCATCGATTTGTTTTAGGTCGT 59.609 41.667 0.00 0.00 34.24 4.34
2701 2729 4.630069 AGTCCATCGATTTGTTTTAGGTCG 59.370 41.667 0.00 0.00 0.00 4.79
2702 2730 5.642063 TGAGTCCATCGATTTGTTTTAGGTC 59.358 40.000 0.00 0.00 0.00 3.85
2703 2731 5.556915 TGAGTCCATCGATTTGTTTTAGGT 58.443 37.500 0.00 0.00 0.00 3.08
2704 2732 6.494893 TTGAGTCCATCGATTTGTTTTAGG 57.505 37.500 0.00 0.00 0.00 2.69
2705 2733 8.454106 AGATTTGAGTCCATCGATTTGTTTTAG 58.546 33.333 0.00 0.00 0.00 1.85
2706 2734 8.335532 AGATTTGAGTCCATCGATTTGTTTTA 57.664 30.769 0.00 0.00 0.00 1.52
2707 2735 7.219484 AGATTTGAGTCCATCGATTTGTTTT 57.781 32.000 0.00 0.00 0.00 2.43
2708 2736 6.824305 AGATTTGAGTCCATCGATTTGTTT 57.176 33.333 0.00 0.00 0.00 2.83
2709 2737 6.824305 AAGATTTGAGTCCATCGATTTGTT 57.176 33.333 0.00 0.00 0.00 2.83
2710 2738 6.824305 AAAGATTTGAGTCCATCGATTTGT 57.176 33.333 0.00 0.00 0.00 2.83
2711 2739 7.274250 GGAAAAAGATTTGAGTCCATCGATTTG 59.726 37.037 0.00 0.00 0.00 2.32
2712 2740 7.039784 TGGAAAAAGATTTGAGTCCATCGATTT 60.040 33.333 0.00 0.00 0.00 2.17
2713 2741 6.434028 TGGAAAAAGATTTGAGTCCATCGATT 59.566 34.615 0.00 0.00 0.00 3.34
2714 2742 5.945784 TGGAAAAAGATTTGAGTCCATCGAT 59.054 36.000 0.00 0.00 0.00 3.59
2715 2743 5.312895 TGGAAAAAGATTTGAGTCCATCGA 58.687 37.500 0.00 0.00 0.00 3.59
2716 2744 5.627499 TGGAAAAAGATTTGAGTCCATCG 57.373 39.130 0.00 0.00 0.00 3.84
2717 2745 5.809051 GCATGGAAAAAGATTTGAGTCCATC 59.191 40.000 12.24 0.00 30.85 3.51
2718 2746 5.622914 CGCATGGAAAAAGATTTGAGTCCAT 60.623 40.000 10.46 10.46 32.50 3.41
2719 2747 4.321156 CGCATGGAAAAAGATTTGAGTCCA 60.321 41.667 0.00 7.64 0.00 4.02
2720 2748 4.082787 TCGCATGGAAAAAGATTTGAGTCC 60.083 41.667 0.00 0.00 0.00 3.85
2721 2749 4.853743 GTCGCATGGAAAAAGATTTGAGTC 59.146 41.667 0.00 0.00 0.00 3.36
2722 2750 4.520492 AGTCGCATGGAAAAAGATTTGAGT 59.480 37.500 0.00 0.00 0.00 3.41
2723 2751 4.855388 CAGTCGCATGGAAAAAGATTTGAG 59.145 41.667 0.00 0.00 0.00 3.02
2724 2752 4.278170 ACAGTCGCATGGAAAAAGATTTGA 59.722 37.500 0.00 0.00 0.00 2.69
2725 2753 4.549458 ACAGTCGCATGGAAAAAGATTTG 58.451 39.130 0.00 0.00 0.00 2.32
2726 2754 4.278170 TGACAGTCGCATGGAAAAAGATTT 59.722 37.500 0.00 0.00 0.00 2.17
2727 2755 3.820467 TGACAGTCGCATGGAAAAAGATT 59.180 39.130 0.00 0.00 0.00 2.40
2728 2756 3.411446 TGACAGTCGCATGGAAAAAGAT 58.589 40.909 0.00 0.00 0.00 2.40
2729 2757 2.844946 TGACAGTCGCATGGAAAAAGA 58.155 42.857 0.00 0.00 0.00 2.52
2730 2758 3.438087 AGATGACAGTCGCATGGAAAAAG 59.562 43.478 0.00 0.00 0.00 2.27
2731 2759 3.411446 AGATGACAGTCGCATGGAAAAA 58.589 40.909 0.00 0.00 0.00 1.94
2732 2760 3.057969 AGATGACAGTCGCATGGAAAA 57.942 42.857 0.00 0.00 0.00 2.29
2733 2761 2.768253 AGATGACAGTCGCATGGAAA 57.232 45.000 0.00 0.00 0.00 3.13
2734 2762 2.481969 GCTAGATGACAGTCGCATGGAA 60.482 50.000 0.00 0.00 0.00 3.53
2735 2763 1.067669 GCTAGATGACAGTCGCATGGA 59.932 52.381 0.00 0.00 0.00 3.41
2736 2764 1.495878 GCTAGATGACAGTCGCATGG 58.504 55.000 0.00 0.00 0.00 3.66
2737 2765 1.202452 TGGCTAGATGACAGTCGCATG 60.202 52.381 0.00 0.00 0.00 4.06
2738 2766 1.114627 TGGCTAGATGACAGTCGCAT 58.885 50.000 0.00 0.00 0.00 4.73
2739 2767 0.173481 GTGGCTAGATGACAGTCGCA 59.827 55.000 0.00 0.00 31.98 5.10
2740 2768 0.457851 AGTGGCTAGATGACAGTCGC 59.542 55.000 0.00 0.00 29.58 5.19
2741 2769 2.483583 GAGTGGCTAGATGACAGTCG 57.516 55.000 0.00 0.00 43.49 4.18
2743 2771 1.007721 AGGGAGTGGCTAGATGACAGT 59.992 52.381 0.00 0.00 40.78 3.55
2744 2772 1.786937 AGGGAGTGGCTAGATGACAG 58.213 55.000 0.00 0.00 31.98 3.51
2745 2773 2.111384 GAAGGGAGTGGCTAGATGACA 58.889 52.381 0.00 0.00 0.00 3.58
2746 2774 1.067821 CGAAGGGAGTGGCTAGATGAC 59.932 57.143 0.00 0.00 0.00 3.06
2747 2775 1.403814 CGAAGGGAGTGGCTAGATGA 58.596 55.000 0.00 0.00 0.00 2.92
2748 2776 0.249657 GCGAAGGGAGTGGCTAGATG 60.250 60.000 0.00 0.00 0.00 2.90
2749 2777 1.739338 CGCGAAGGGAGTGGCTAGAT 61.739 60.000 0.00 0.00 46.37 1.98
2750 2778 2.415608 CGCGAAGGGAGTGGCTAGA 61.416 63.158 0.00 0.00 46.37 2.43
2751 2779 2.105128 CGCGAAGGGAGTGGCTAG 59.895 66.667 0.00 0.00 46.37 3.42
2752 2780 2.678934 ACGCGAAGGGAGTGGCTA 60.679 61.111 15.93 0.00 46.37 3.93
2753 2781 4.379243 CACGCGAAGGGAGTGGCT 62.379 66.667 15.93 0.00 46.37 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.