Multiple sequence alignment - TraesCS4B01G189800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G189800 chr4B 100.000 2675 0 0 1 2675 412589620 412592294 0.000000e+00 4940.0
1 TraesCS4B01G189800 chr4A 94.444 1764 45 28 465 2199 138833700 138831961 0.000000e+00 2665.0
2 TraesCS4B01G189800 chr4A 91.163 430 14 5 2270 2675 138831962 138831533 1.800000e-156 562.0
3 TraesCS4B01G189800 chr4D 93.584 1730 59 27 495 2191 334631620 334633330 0.000000e+00 2532.0
4 TraesCS4B01G189800 chr4D 96.916 227 7 0 2449 2675 334633573 334633799 5.400000e-102 381.0
5 TraesCS4B01G189800 chr4D 81.461 178 14 6 2277 2435 334633328 334633505 7.770000e-26 128.0
6 TraesCS4B01G189800 chr1B 92.275 466 30 5 2 461 231624010 231623545 0.000000e+00 656.0
7 TraesCS4B01G189800 chr1B 79.882 507 85 7 1162 1664 529998581 529998088 3.280000e-94 355.0
8 TraesCS4B01G189800 chr3B 91.485 458 36 2 4 460 33331906 33332361 6.290000e-176 627.0
9 TraesCS4B01G189800 chr3B 91.126 462 37 4 2 459 257779301 257779762 8.130000e-175 623.0
10 TraesCS4B01G189800 chr7D 89.936 467 40 6 2 461 249618764 249618298 1.770000e-166 595.0
11 TraesCS4B01G189800 chr1D 89.765 469 43 4 2 465 346392289 346392757 1.770000e-166 595.0
12 TraesCS4B01G189800 chr1D 89.485 466 42 6 2 461 461082458 461081994 1.380000e-162 582.0
13 TraesCS4B01G189800 chr1D 89.270 466 44 5 2 461 21878920 21879385 1.790000e-161 579.0
14 TraesCS4B01G189800 chr1D 80.473 507 82 8 1162 1664 392697011 392697504 3.250000e-99 372.0
15 TraesCS4B01G189800 chr1D 92.500 40 2 1 2220 2259 194928270 194928232 3.720000e-04 56.5
16 TraesCS4B01G189800 chr2D 89.655 464 44 3 2 461 596590803 596591266 2.970000e-164 588.0
17 TraesCS4B01G189800 chr2D 84.820 527 67 10 1148 1667 37646337 37645817 3.950000e-143 518.0
18 TraesCS4B01G189800 chr2D 83.750 80 6 2 2200 2272 574118116 574118037 4.780000e-08 69.4
19 TraesCS4B01G189800 chr3A 89.417 463 46 3 2 461 688985069 688985531 4.960000e-162 580.0
20 TraesCS4B01G189800 chr2B 84.952 525 70 7 1148 1667 65883468 65882948 8.480000e-145 523.0
21 TraesCS4B01G189800 chr2A 84.091 528 69 12 1148 1667 42495212 42494692 1.850000e-136 496.0
22 TraesCS4B01G189800 chr1A 80.237 506 83 7 1162 1663 492652782 492652290 5.440000e-97 364.0
23 TraesCS4B01G189800 chr3D 78.543 508 86 14 1147 1638 454904066 454904566 2.000000e-81 313.0
24 TraesCS4B01G189800 chr6D 92.958 71 5 0 2201 2271 377341741 377341671 1.310000e-18 104.0
25 TraesCS4B01G189800 chr6D 94.737 57 1 2 2216 2271 295046628 295046573 1.320000e-13 87.9
26 TraesCS4B01G189800 chr6A 91.549 71 6 0 2201 2271 518785633 518785563 6.090000e-17 99.0
27 TraesCS4B01G189800 chr6A 90.000 70 7 0 2202 2271 460643434 460643365 1.020000e-14 91.6
28 TraesCS4B01G189800 chr5D 91.549 71 5 1 2202 2272 50501948 50502017 2.190000e-16 97.1
29 TraesCS4B01G189800 chr5D 93.443 61 4 0 2214 2274 515669221 515669281 1.020000e-14 91.6
30 TraesCS4B01G189800 chr5A 85.135 74 5 2 2202 2275 12560781 12560714 1.330000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G189800 chr4B 412589620 412592294 2674 False 4940.000000 4940 100.000000 1 2675 1 chr4B.!!$F1 2674
1 TraesCS4B01G189800 chr4A 138831533 138833700 2167 True 1613.500000 2665 92.803500 465 2675 2 chr4A.!!$R1 2210
2 TraesCS4B01G189800 chr4D 334631620 334633799 2179 False 1013.666667 2532 90.653667 495 2675 3 chr4D.!!$F1 2180
3 TraesCS4B01G189800 chr2D 37645817 37646337 520 True 518.000000 518 84.820000 1148 1667 1 chr2D.!!$R1 519
4 TraesCS4B01G189800 chr2B 65882948 65883468 520 True 523.000000 523 84.952000 1148 1667 1 chr2B.!!$R1 519
5 TraesCS4B01G189800 chr2A 42494692 42495212 520 True 496.000000 496 84.091000 1148 1667 1 chr2A.!!$R1 519
6 TraesCS4B01G189800 chr3D 454904066 454904566 500 False 313.000000 313 78.543000 1147 1638 1 chr3D.!!$F1 491

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
447 448 0.03438 GAGGCAGGGGTTTAACCTCC 60.034 60.0 10.86 11.5 40.56 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1998 2024 0.46546 TCAACAGCACACAAGGGGTC 60.465 55.0 0.0 0.0 0.0 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.970639 GGACAGGTGCTACGCTGA 59.029 61.111 0.00 0.00 0.00 4.26
18 19 1.153745 GGACAGGTGCTACGCTGAG 60.154 63.158 0.00 0.00 0.00 3.35
19 20 1.587054 GACAGGTGCTACGCTGAGT 59.413 57.895 0.00 0.00 0.00 3.41
20 21 0.456995 GACAGGTGCTACGCTGAGTC 60.457 60.000 0.00 0.00 0.00 3.36
21 22 1.179174 ACAGGTGCTACGCTGAGTCA 61.179 55.000 0.00 0.00 0.00 3.41
22 23 0.174389 CAGGTGCTACGCTGAGTCAT 59.826 55.000 0.00 0.00 0.00 3.06
23 24 0.174389 AGGTGCTACGCTGAGTCATG 59.826 55.000 0.00 0.00 0.00 3.07
24 25 1.424493 GGTGCTACGCTGAGTCATGC 61.424 60.000 0.00 0.00 0.00 4.06
25 26 1.153568 TGCTACGCTGAGTCATGCC 60.154 57.895 0.00 0.00 0.00 4.40
26 27 1.142748 GCTACGCTGAGTCATGCCT 59.857 57.895 0.00 0.00 0.00 4.75
27 28 1.150567 GCTACGCTGAGTCATGCCTG 61.151 60.000 0.00 0.00 0.00 4.85
28 29 0.457443 CTACGCTGAGTCATGCCTGA 59.543 55.000 0.00 0.00 0.00 3.86
29 30 1.068281 CTACGCTGAGTCATGCCTGAT 59.932 52.381 0.00 0.00 32.98 2.90
30 31 0.251354 ACGCTGAGTCATGCCTGATT 59.749 50.000 0.00 0.00 32.98 2.57
31 32 0.656259 CGCTGAGTCATGCCTGATTG 59.344 55.000 0.00 0.00 32.98 2.67
32 33 1.022735 GCTGAGTCATGCCTGATTGG 58.977 55.000 0.00 0.00 39.35 3.16
43 44 0.729116 CCTGATTGGCAAGTGCTACG 59.271 55.000 5.96 0.00 41.70 3.51
44 45 0.097674 CTGATTGGCAAGTGCTACGC 59.902 55.000 5.96 0.00 41.70 4.42
45 46 0.605050 TGATTGGCAAGTGCTACGCA 60.605 50.000 5.96 0.00 41.70 5.24
46 47 0.734889 GATTGGCAAGTGCTACGCAT 59.265 50.000 5.96 0.00 41.91 4.73
47 48 0.452987 ATTGGCAAGTGCTACGCATG 59.547 50.000 5.96 0.00 41.91 4.06
48 49 0.605050 TTGGCAAGTGCTACGCATGA 60.605 50.000 0.00 0.00 41.91 3.07
49 50 1.298157 TGGCAAGTGCTACGCATGAC 61.298 55.000 0.00 0.00 41.91 3.06
50 51 1.298157 GGCAAGTGCTACGCATGACA 61.298 55.000 0.00 0.00 41.91 3.58
51 52 0.095935 GCAAGTGCTACGCATGACAG 59.904 55.000 0.00 0.00 41.91 3.51
52 53 1.713597 CAAGTGCTACGCATGACAGA 58.286 50.000 0.00 0.00 41.91 3.41
53 54 2.274437 CAAGTGCTACGCATGACAGAT 58.726 47.619 0.00 0.00 41.91 2.90
54 55 2.215907 AGTGCTACGCATGACAGATC 57.784 50.000 0.00 0.00 41.91 2.75
55 56 1.753649 AGTGCTACGCATGACAGATCT 59.246 47.619 0.00 0.00 41.91 2.75
56 57 2.167281 AGTGCTACGCATGACAGATCTT 59.833 45.455 0.00 0.00 41.91 2.40
57 58 2.283617 GTGCTACGCATGACAGATCTTG 59.716 50.000 0.00 0.00 41.91 3.02
74 75 1.821336 TTGCAAAGACTTCGCGTTTG 58.179 45.000 5.77 10.41 34.83 2.93
75 76 1.010580 TGCAAAGACTTCGCGTTTGA 58.989 45.000 19.52 5.59 33.78 2.69
76 77 1.267832 TGCAAAGACTTCGCGTTTGAC 60.268 47.619 19.52 12.42 33.78 3.18
77 78 1.647748 CAAAGACTTCGCGTTTGACG 58.352 50.000 12.29 0.00 45.88 4.35
78 79 0.580104 AAAGACTTCGCGTTTGACGG 59.420 50.000 5.77 0.00 42.82 4.79
79 80 0.249155 AAGACTTCGCGTTTGACGGA 60.249 50.000 5.77 0.00 42.82 4.69
80 81 0.038526 AGACTTCGCGTTTGACGGAT 60.039 50.000 5.77 0.00 42.82 4.18
81 82 0.093026 GACTTCGCGTTTGACGGATG 59.907 55.000 5.77 3.77 42.82 3.51
82 83 0.319211 ACTTCGCGTTTGACGGATGA 60.319 50.000 5.77 0.00 42.82 2.92
83 84 0.366871 CTTCGCGTTTGACGGATGAG 59.633 55.000 5.77 0.00 42.82 2.90
84 85 1.623081 TTCGCGTTTGACGGATGAGC 61.623 55.000 5.77 0.00 42.82 4.26
85 86 2.395690 GCGTTTGACGGATGAGCG 59.604 61.111 2.48 0.00 42.82 5.03
86 87 2.395690 CGTTTGACGGATGAGCGC 59.604 61.111 0.00 0.00 38.08 5.92
87 88 2.379634 CGTTTGACGGATGAGCGCA 61.380 57.895 11.47 0.00 38.08 6.09
88 89 1.421485 GTTTGACGGATGAGCGCAG 59.579 57.895 11.47 0.00 0.00 5.18
89 90 1.741401 TTTGACGGATGAGCGCAGG 60.741 57.895 11.47 0.00 0.00 4.85
90 91 3.664025 TTGACGGATGAGCGCAGGG 62.664 63.158 11.47 0.00 0.00 4.45
116 117 3.202001 CCGTTAGGCGCCATGGTG 61.202 66.667 31.54 21.43 39.71 4.17
117 118 3.202001 CGTTAGGCGCCATGGTGG 61.202 66.667 31.54 13.53 41.55 4.61
126 127 3.430862 CCATGGTGGCGTCAACGG 61.431 66.667 2.57 0.00 40.23 4.44
127 128 2.358125 CATGGTGGCGTCAACGGA 60.358 61.111 0.00 0.00 40.23 4.69
128 129 1.745115 CATGGTGGCGTCAACGGAT 60.745 57.895 0.00 0.00 40.23 4.18
129 130 1.745115 ATGGTGGCGTCAACGGATG 60.745 57.895 0.00 0.00 40.23 3.51
130 131 2.358247 GGTGGCGTCAACGGATGT 60.358 61.111 4.54 0.00 40.23 3.06
131 132 2.388232 GGTGGCGTCAACGGATGTC 61.388 63.158 4.54 0.00 40.23 3.06
132 133 2.047655 TGGCGTCAACGGATGTCC 60.048 61.111 4.54 0.00 40.23 4.02
142 143 4.713946 GGATGTCCGAACTGGCAA 57.286 55.556 0.00 0.00 37.80 4.52
143 144 2.471255 GGATGTCCGAACTGGCAAG 58.529 57.895 0.00 0.00 37.80 4.01
144 145 1.026718 GGATGTCCGAACTGGCAAGG 61.027 60.000 0.00 0.00 37.80 3.61
145 146 0.036388 GATGTCCGAACTGGCAAGGA 60.036 55.000 0.00 0.00 37.80 3.36
146 147 0.620556 ATGTCCGAACTGGCAAGGAT 59.379 50.000 0.00 0.00 37.80 3.24
147 148 0.321564 TGTCCGAACTGGCAAGGATG 60.322 55.000 0.00 0.00 37.80 3.51
148 149 0.036388 GTCCGAACTGGCAAGGATGA 60.036 55.000 0.00 0.00 37.80 2.92
149 150 0.911769 TCCGAACTGGCAAGGATGAT 59.088 50.000 0.00 0.00 37.80 2.45
150 151 1.019673 CCGAACTGGCAAGGATGATG 58.980 55.000 0.00 0.00 0.00 3.07
151 152 0.379669 CGAACTGGCAAGGATGATGC 59.620 55.000 0.00 0.00 43.08 3.91
152 153 0.379669 GAACTGGCAAGGATGATGCG 59.620 55.000 0.00 0.00 44.75 4.73
153 154 1.033746 AACTGGCAAGGATGATGCGG 61.034 55.000 0.00 0.00 44.75 5.69
154 155 1.153107 CTGGCAAGGATGATGCGGA 60.153 57.895 0.00 0.00 44.75 5.54
155 156 0.536687 CTGGCAAGGATGATGCGGAT 60.537 55.000 0.00 0.00 44.75 4.18
156 157 0.535780 TGGCAAGGATGATGCGGATC 60.536 55.000 10.37 10.37 44.75 3.36
157 158 0.250640 GGCAAGGATGATGCGGATCT 60.251 55.000 18.23 3.60 44.75 2.75
158 159 1.155042 GCAAGGATGATGCGGATCTC 58.845 55.000 18.23 12.11 33.57 2.75
159 160 1.270732 GCAAGGATGATGCGGATCTCT 60.271 52.381 18.23 9.81 33.57 3.10
160 161 2.686235 CAAGGATGATGCGGATCTCTC 58.314 52.381 18.23 13.65 0.00 3.20
161 162 1.265236 AGGATGATGCGGATCTCTCC 58.735 55.000 22.57 22.57 38.29 3.71
162 163 1.203162 AGGATGATGCGGATCTCTCCT 60.203 52.381 25.23 25.23 39.65 3.69
163 164 1.067000 GGATGATGCGGATCTCTCCTG 60.067 57.143 22.69 0.00 39.65 3.86
164 165 1.891811 GATGATGCGGATCTCTCCTGA 59.108 52.381 18.23 0.00 39.65 3.86
165 166 1.780503 TGATGCGGATCTCTCCTGAA 58.219 50.000 18.23 0.00 39.65 3.02
166 167 1.685517 TGATGCGGATCTCTCCTGAAG 59.314 52.381 18.23 0.00 39.65 3.02
167 168 1.959985 GATGCGGATCTCTCCTGAAGA 59.040 52.381 9.99 0.00 39.65 2.87
168 169 2.079170 TGCGGATCTCTCCTGAAGAT 57.921 50.000 0.00 0.00 39.65 2.40
169 170 1.685517 TGCGGATCTCTCCTGAAGATG 59.314 52.381 0.00 0.00 39.65 2.90
170 171 1.000731 GCGGATCTCTCCTGAAGATGG 59.999 57.143 0.00 0.00 39.65 3.51
171 172 1.617850 CGGATCTCTCCTGAAGATGGG 59.382 57.143 0.00 0.00 39.65 4.00
172 173 2.688477 GGATCTCTCCTGAAGATGGGT 58.312 52.381 0.00 0.00 38.65 4.51
173 174 2.632512 GGATCTCTCCTGAAGATGGGTC 59.367 54.545 0.00 0.00 38.65 4.46
174 175 2.928036 TCTCTCCTGAAGATGGGTCA 57.072 50.000 0.00 0.00 32.19 4.02
175 176 2.744760 TCTCTCCTGAAGATGGGTCAG 58.255 52.381 0.00 0.00 41.87 3.51
176 177 2.043664 TCTCTCCTGAAGATGGGTCAGT 59.956 50.000 1.14 0.00 40.83 3.41
177 178 2.168106 CTCTCCTGAAGATGGGTCAGTG 59.832 54.545 1.14 0.00 40.83 3.66
178 179 1.209019 CTCCTGAAGATGGGTCAGTGG 59.791 57.143 1.14 0.00 40.83 4.00
179 180 0.987294 CCTGAAGATGGGTCAGTGGT 59.013 55.000 1.14 0.00 40.83 4.16
180 181 1.065854 CCTGAAGATGGGTCAGTGGTC 60.066 57.143 1.14 0.00 40.83 4.02
181 182 0.984230 TGAAGATGGGTCAGTGGTCC 59.016 55.000 0.00 0.00 0.00 4.46
182 183 0.984230 GAAGATGGGTCAGTGGTCCA 59.016 55.000 7.61 7.61 34.79 4.02
183 184 1.351017 GAAGATGGGTCAGTGGTCCAA 59.649 52.381 8.94 0.00 33.90 3.53
184 185 1.673767 AGATGGGTCAGTGGTCCAAT 58.326 50.000 8.94 0.00 33.90 3.16
185 186 1.283029 AGATGGGTCAGTGGTCCAATG 59.717 52.381 13.25 13.25 33.90 2.82
186 187 1.281867 GATGGGTCAGTGGTCCAATGA 59.718 52.381 17.90 17.90 36.10 2.57
187 188 1.371467 TGGGTCAGTGGTCCAATGAT 58.629 50.000 23.89 0.00 40.47 2.45
188 189 1.004628 TGGGTCAGTGGTCCAATGATG 59.995 52.381 23.89 6.78 40.47 3.07
189 190 1.281867 GGGTCAGTGGTCCAATGATGA 59.718 52.381 23.89 8.96 40.47 2.92
190 191 2.092212 GGGTCAGTGGTCCAATGATGAT 60.092 50.000 23.89 0.00 40.47 2.45
191 192 2.947652 GGTCAGTGGTCCAATGATGATG 59.052 50.000 23.89 0.00 40.47 3.07
192 193 2.947652 GTCAGTGGTCCAATGATGATGG 59.052 50.000 23.89 0.00 40.47 3.51
193 194 1.679680 CAGTGGTCCAATGATGATGGC 59.320 52.381 14.24 0.00 37.88 4.40
194 195 0.664761 GTGGTCCAATGATGATGGCG 59.335 55.000 0.00 0.00 37.88 5.69
195 196 0.466007 TGGTCCAATGATGATGGCGG 60.466 55.000 0.00 0.00 37.88 6.13
196 197 1.656441 GTCCAATGATGATGGCGGC 59.344 57.895 0.00 0.00 37.88 6.53
197 198 0.820891 GTCCAATGATGATGGCGGCT 60.821 55.000 11.43 0.00 37.88 5.52
198 199 0.535780 TCCAATGATGATGGCGGCTC 60.536 55.000 11.43 6.00 37.88 4.70
199 200 1.521450 CCAATGATGATGGCGGCTCC 61.521 60.000 11.43 2.07 0.00 4.70
200 201 0.536687 CAATGATGATGGCGGCTCCT 60.537 55.000 11.43 0.00 35.26 3.69
201 202 1.059098 AATGATGATGGCGGCTCCTA 58.941 50.000 11.43 0.00 35.26 2.94
202 203 1.059098 ATGATGATGGCGGCTCCTAA 58.941 50.000 11.43 0.00 35.26 2.69
203 204 0.836606 TGATGATGGCGGCTCCTAAA 59.163 50.000 11.43 0.00 35.26 1.85
204 205 1.211703 TGATGATGGCGGCTCCTAAAA 59.788 47.619 11.43 0.00 35.26 1.52
205 206 1.604278 GATGATGGCGGCTCCTAAAAC 59.396 52.381 11.43 0.00 35.26 2.43
206 207 0.742990 TGATGGCGGCTCCTAAAACG 60.743 55.000 11.43 0.00 35.26 3.60
207 208 0.743345 GATGGCGGCTCCTAAAACGT 60.743 55.000 11.43 0.00 35.26 3.99
208 209 1.024579 ATGGCGGCTCCTAAAACGTG 61.025 55.000 11.43 0.00 35.26 4.49
209 210 1.670083 GGCGGCTCCTAAAACGTGT 60.670 57.895 0.00 0.00 0.00 4.49
210 211 1.495951 GCGGCTCCTAAAACGTGTG 59.504 57.895 0.00 0.00 0.00 3.82
211 212 1.495951 CGGCTCCTAAAACGTGTGC 59.504 57.895 0.00 0.00 0.00 4.57
212 213 1.225376 CGGCTCCTAAAACGTGTGCA 61.225 55.000 0.00 0.00 0.00 4.57
213 214 1.165270 GGCTCCTAAAACGTGTGCAT 58.835 50.000 0.00 0.00 0.00 3.96
214 215 1.135689 GGCTCCTAAAACGTGTGCATG 60.136 52.381 0.00 0.00 0.00 4.06
215 216 1.535462 GCTCCTAAAACGTGTGCATGT 59.465 47.619 0.00 0.00 0.00 3.21
216 217 2.665519 GCTCCTAAAACGTGTGCATGTG 60.666 50.000 0.00 0.00 0.00 3.21
217 218 2.805671 CTCCTAAAACGTGTGCATGTGA 59.194 45.455 0.00 0.00 0.00 3.58
218 219 3.407698 TCCTAAAACGTGTGCATGTGAT 58.592 40.909 0.00 0.00 0.00 3.06
219 220 3.188254 TCCTAAAACGTGTGCATGTGATG 59.812 43.478 0.00 0.00 0.00 3.07
220 221 3.058293 CCTAAAACGTGTGCATGTGATGT 60.058 43.478 0.00 0.00 0.00 3.06
221 222 2.404265 AAACGTGTGCATGTGATGTG 57.596 45.000 0.00 0.00 0.00 3.21
222 223 0.040157 AACGTGTGCATGTGATGTGC 60.040 50.000 0.00 0.00 42.81 4.57
223 224 1.510414 CGTGTGCATGTGATGTGCG 60.510 57.895 0.00 0.00 45.37 5.34
225 226 2.872557 GTGCATGTGATGTGCGCT 59.127 55.556 9.73 0.00 46.56 5.92
226 227 1.210931 GTGCATGTGATGTGCGCTT 59.789 52.632 9.73 0.00 46.56 4.68
227 228 0.387622 GTGCATGTGATGTGCGCTTT 60.388 50.000 9.73 0.00 46.56 3.51
228 229 1.135717 GTGCATGTGATGTGCGCTTTA 60.136 47.619 9.73 0.00 46.56 1.85
229 230 1.130938 TGCATGTGATGTGCGCTTTAG 59.869 47.619 9.73 0.00 45.37 1.85
230 231 1.131126 GCATGTGATGTGCGCTTTAGT 59.869 47.619 9.73 0.00 32.29 2.24
231 232 2.351418 GCATGTGATGTGCGCTTTAGTA 59.649 45.455 9.73 0.00 32.29 1.82
232 233 3.544834 GCATGTGATGTGCGCTTTAGTAG 60.545 47.826 9.73 0.00 32.29 2.57
233 234 2.616960 TGTGATGTGCGCTTTAGTAGG 58.383 47.619 9.73 0.00 0.00 3.18
234 235 1.327764 GTGATGTGCGCTTTAGTAGGC 59.672 52.381 9.73 0.00 0.00 3.93
235 236 1.207089 TGATGTGCGCTTTAGTAGGCT 59.793 47.619 9.73 0.00 0.00 4.58
236 237 1.594862 GATGTGCGCTTTAGTAGGCTG 59.405 52.381 9.73 0.00 0.00 4.85
237 238 1.019278 TGTGCGCTTTAGTAGGCTGC 61.019 55.000 9.73 0.00 0.00 5.25
238 239 1.019278 GTGCGCTTTAGTAGGCTGCA 61.019 55.000 9.73 0.00 36.37 4.41
239 240 1.019278 TGCGCTTTAGTAGGCTGCAC 61.019 55.000 9.73 0.00 34.90 4.57
240 241 1.706287 GCGCTTTAGTAGGCTGCACC 61.706 60.000 5.14 0.00 39.61 5.01
241 242 1.421410 CGCTTTAGTAGGCTGCACCG 61.421 60.000 5.14 0.00 46.52 4.94
242 243 0.108329 GCTTTAGTAGGCTGCACCGA 60.108 55.000 5.14 0.00 46.52 4.69
243 244 1.674817 GCTTTAGTAGGCTGCACCGAA 60.675 52.381 5.14 0.00 46.52 4.30
244 245 2.906354 CTTTAGTAGGCTGCACCGAAT 58.094 47.619 5.14 0.00 46.52 3.34
245 246 2.309528 TTAGTAGGCTGCACCGAATG 57.690 50.000 5.14 0.00 46.52 2.67
246 247 1.191535 TAGTAGGCTGCACCGAATGT 58.808 50.000 5.14 0.00 46.52 2.71
247 248 0.324943 AGTAGGCTGCACCGAATGTT 59.675 50.000 5.14 0.00 46.52 2.71
248 249 0.447801 GTAGGCTGCACCGAATGTTG 59.552 55.000 0.50 0.00 46.52 3.33
249 250 0.323302 TAGGCTGCACCGAATGTTGA 59.677 50.000 0.50 0.00 46.52 3.18
250 251 0.322816 AGGCTGCACCGAATGTTGAT 60.323 50.000 0.50 0.00 46.52 2.57
251 252 0.099436 GGCTGCACCGAATGTTGATC 59.901 55.000 0.50 0.00 0.00 2.92
252 253 1.089920 GCTGCACCGAATGTTGATCT 58.910 50.000 0.00 0.00 0.00 2.75
253 254 1.063174 GCTGCACCGAATGTTGATCTC 59.937 52.381 0.00 0.00 0.00 2.75
254 255 1.325640 CTGCACCGAATGTTGATCTCG 59.674 52.381 0.00 0.00 0.00 4.04
255 256 1.067213 TGCACCGAATGTTGATCTCGA 60.067 47.619 3.11 0.00 34.52 4.04
256 257 2.205074 GCACCGAATGTTGATCTCGAT 58.795 47.619 3.11 0.00 34.52 3.59
257 258 3.181480 TGCACCGAATGTTGATCTCGATA 60.181 43.478 3.11 0.00 34.52 2.92
258 259 3.182572 GCACCGAATGTTGATCTCGATAC 59.817 47.826 3.11 0.00 34.52 2.24
259 260 3.422217 CACCGAATGTTGATCTCGATACG 59.578 47.826 3.11 0.00 34.52 3.06
260 261 3.066342 ACCGAATGTTGATCTCGATACGT 59.934 43.478 3.11 0.00 34.52 3.57
261 262 4.042398 CCGAATGTTGATCTCGATACGTT 58.958 43.478 0.00 0.00 34.52 3.99
262 263 5.209977 CCGAATGTTGATCTCGATACGTTA 58.790 41.667 0.00 0.00 34.52 3.18
263 264 5.856986 CCGAATGTTGATCTCGATACGTTAT 59.143 40.000 0.00 0.00 34.52 1.89
264 265 6.183359 CCGAATGTTGATCTCGATACGTTATG 60.183 42.308 0.00 0.00 34.52 1.90
265 266 6.359883 CGAATGTTGATCTCGATACGTTATGT 59.640 38.462 0.00 0.00 34.52 2.29
266 267 6.993175 ATGTTGATCTCGATACGTTATGTG 57.007 37.500 0.00 0.00 0.00 3.21
267 268 5.278604 TGTTGATCTCGATACGTTATGTGG 58.721 41.667 0.00 0.00 0.00 4.17
268 269 5.066764 TGTTGATCTCGATACGTTATGTGGA 59.933 40.000 0.00 0.00 0.00 4.02
269 270 5.959618 TGATCTCGATACGTTATGTGGAT 57.040 39.130 0.00 0.00 0.00 3.41
270 271 5.699839 TGATCTCGATACGTTATGTGGATG 58.300 41.667 0.00 0.00 0.00 3.51
271 272 4.499037 TCTCGATACGTTATGTGGATGG 57.501 45.455 0.00 0.00 0.00 3.51
272 273 4.139038 TCTCGATACGTTATGTGGATGGA 58.861 43.478 0.00 0.00 0.00 3.41
273 274 4.765339 TCTCGATACGTTATGTGGATGGAT 59.235 41.667 0.00 0.00 0.00 3.41
274 275 5.055642 TCGATACGTTATGTGGATGGATC 57.944 43.478 0.00 0.00 0.00 3.36
275 276 3.851969 CGATACGTTATGTGGATGGATCG 59.148 47.826 0.00 0.00 39.62 3.69
276 277 2.526304 ACGTTATGTGGATGGATCGG 57.474 50.000 0.00 0.00 0.00 4.18
277 278 1.148310 CGTTATGTGGATGGATCGGC 58.852 55.000 0.00 0.00 0.00 5.54
278 279 1.148310 GTTATGTGGATGGATCGGCG 58.852 55.000 0.00 0.00 0.00 6.46
279 280 1.044611 TTATGTGGATGGATCGGCGA 58.955 50.000 13.87 13.87 0.00 5.54
280 281 0.317160 TATGTGGATGGATCGGCGAC 59.683 55.000 13.76 6.32 0.00 5.19
292 293 2.968697 GGCGACGACACCGGTTTT 60.969 61.111 2.97 0.00 40.78 2.43
293 294 1.664333 GGCGACGACACCGGTTTTA 60.664 57.895 2.97 0.00 40.78 1.52
294 295 1.620413 GGCGACGACACCGGTTTTAG 61.620 60.000 2.97 0.00 40.78 1.85
295 296 0.664166 GCGACGACACCGGTTTTAGA 60.664 55.000 2.97 0.00 40.78 2.10
296 297 1.986698 CGACGACACCGGTTTTAGAT 58.013 50.000 2.97 0.00 40.78 1.98
297 298 2.731968 GCGACGACACCGGTTTTAGATA 60.732 50.000 2.97 0.00 40.78 1.98
298 299 3.699067 CGACGACACCGGTTTTAGATAT 58.301 45.455 2.97 0.00 40.78 1.63
299 300 3.484649 CGACGACACCGGTTTTAGATATG 59.515 47.826 2.97 0.00 40.78 1.78
300 301 3.788937 ACGACACCGGTTTTAGATATGG 58.211 45.455 2.97 0.00 40.78 2.74
301 302 3.128349 CGACACCGGTTTTAGATATGGG 58.872 50.000 2.97 0.00 0.00 4.00
302 303 3.473625 GACACCGGTTTTAGATATGGGG 58.526 50.000 2.97 0.00 0.00 4.96
303 304 3.116959 ACACCGGTTTTAGATATGGGGA 58.883 45.455 2.97 0.00 0.00 4.81
304 305 3.135895 ACACCGGTTTTAGATATGGGGAG 59.864 47.826 2.97 0.00 0.00 4.30
305 306 3.135895 CACCGGTTTTAGATATGGGGAGT 59.864 47.826 2.97 0.00 0.00 3.85
306 307 3.135895 ACCGGTTTTAGATATGGGGAGTG 59.864 47.826 0.00 0.00 0.00 3.51
307 308 3.389983 CCGGTTTTAGATATGGGGAGTGA 59.610 47.826 0.00 0.00 0.00 3.41
308 309 4.503296 CCGGTTTTAGATATGGGGAGTGAG 60.503 50.000 0.00 0.00 0.00 3.51
309 310 4.344102 CGGTTTTAGATATGGGGAGTGAGA 59.656 45.833 0.00 0.00 0.00 3.27
310 311 5.509840 CGGTTTTAGATATGGGGAGTGAGAG 60.510 48.000 0.00 0.00 0.00 3.20
311 312 5.301555 GTTTTAGATATGGGGAGTGAGAGC 58.698 45.833 0.00 0.00 0.00 4.09
312 313 2.783379 AGATATGGGGAGTGAGAGCA 57.217 50.000 0.00 0.00 0.00 4.26
313 314 2.324541 AGATATGGGGAGTGAGAGCAC 58.675 52.381 0.00 0.00 45.49 4.40
324 325 3.567478 GTGAGAGCACTCCCCATTATT 57.433 47.619 8.77 0.00 41.84 1.40
325 326 4.689612 GTGAGAGCACTCCCCATTATTA 57.310 45.455 8.77 0.00 41.84 0.98
326 327 5.036117 GTGAGAGCACTCCCCATTATTAA 57.964 43.478 8.77 0.00 41.84 1.40
327 328 5.059833 GTGAGAGCACTCCCCATTATTAAG 58.940 45.833 8.77 0.00 41.84 1.85
328 329 4.721776 TGAGAGCACTCCCCATTATTAAGT 59.278 41.667 8.77 0.00 41.99 2.24
329 330 5.191722 TGAGAGCACTCCCCATTATTAAGTT 59.808 40.000 8.77 0.00 41.99 2.66
330 331 6.079712 AGAGCACTCCCCATTATTAAGTTT 57.920 37.500 0.00 0.00 0.00 2.66
331 332 5.888161 AGAGCACTCCCCATTATTAAGTTTG 59.112 40.000 0.00 0.00 0.00 2.93
332 333 5.580022 AGCACTCCCCATTATTAAGTTTGT 58.420 37.500 0.00 0.00 0.00 2.83
333 334 6.727394 AGCACTCCCCATTATTAAGTTTGTA 58.273 36.000 0.00 0.00 0.00 2.41
334 335 6.828785 AGCACTCCCCATTATTAAGTTTGTAG 59.171 38.462 0.00 0.00 0.00 2.74
335 336 6.039382 GCACTCCCCATTATTAAGTTTGTAGG 59.961 42.308 0.00 0.00 0.00 3.18
336 337 6.039382 CACTCCCCATTATTAAGTTTGTAGGC 59.961 42.308 0.00 0.00 0.00 3.93
337 338 5.127491 TCCCCATTATTAAGTTTGTAGGCG 58.873 41.667 0.00 0.00 0.00 5.52
338 339 4.885325 CCCCATTATTAAGTTTGTAGGCGT 59.115 41.667 0.00 0.00 0.00 5.68
339 340 5.220970 CCCCATTATTAAGTTTGTAGGCGTG 60.221 44.000 0.00 0.00 0.00 5.34
340 341 5.587043 CCCATTATTAAGTTTGTAGGCGTGA 59.413 40.000 0.00 0.00 0.00 4.35
341 342 6.238374 CCCATTATTAAGTTTGTAGGCGTGAG 60.238 42.308 0.00 0.00 0.00 3.51
342 343 6.315393 CCATTATTAAGTTTGTAGGCGTGAGT 59.685 38.462 0.00 0.00 0.00 3.41
343 344 6.715344 TTATTAAGTTTGTAGGCGTGAGTG 57.285 37.500 0.00 0.00 0.00 3.51
344 345 2.902705 AAGTTTGTAGGCGTGAGTGA 57.097 45.000 0.00 0.00 0.00 3.41
345 346 3.402628 AAGTTTGTAGGCGTGAGTGAT 57.597 42.857 0.00 0.00 0.00 3.06
346 347 2.688507 AGTTTGTAGGCGTGAGTGATG 58.311 47.619 0.00 0.00 0.00 3.07
347 348 1.732259 GTTTGTAGGCGTGAGTGATGG 59.268 52.381 0.00 0.00 0.00 3.51
348 349 0.973632 TTGTAGGCGTGAGTGATGGT 59.026 50.000 0.00 0.00 0.00 3.55
349 350 0.973632 TGTAGGCGTGAGTGATGGTT 59.026 50.000 0.00 0.00 0.00 3.67
350 351 1.346395 TGTAGGCGTGAGTGATGGTTT 59.654 47.619 0.00 0.00 0.00 3.27
351 352 2.000447 GTAGGCGTGAGTGATGGTTTC 59.000 52.381 0.00 0.00 0.00 2.78
352 353 0.670546 AGGCGTGAGTGATGGTTTCG 60.671 55.000 0.00 0.00 0.00 3.46
353 354 1.635663 GGCGTGAGTGATGGTTTCGG 61.636 60.000 0.00 0.00 0.00 4.30
354 355 1.635663 GCGTGAGTGATGGTTTCGGG 61.636 60.000 0.00 0.00 0.00 5.14
355 356 0.320421 CGTGAGTGATGGTTTCGGGT 60.320 55.000 0.00 0.00 0.00 5.28
356 357 1.156736 GTGAGTGATGGTTTCGGGTG 58.843 55.000 0.00 0.00 0.00 4.61
357 358 0.036164 TGAGTGATGGTTTCGGGTGG 59.964 55.000 0.00 0.00 0.00 4.61
358 359 0.323629 GAGTGATGGTTTCGGGTGGA 59.676 55.000 0.00 0.00 0.00 4.02
359 360 0.991920 AGTGATGGTTTCGGGTGGAT 59.008 50.000 0.00 0.00 0.00 3.41
360 361 1.354368 AGTGATGGTTTCGGGTGGATT 59.646 47.619 0.00 0.00 0.00 3.01
361 362 1.472480 GTGATGGTTTCGGGTGGATTG 59.528 52.381 0.00 0.00 0.00 2.67
362 363 1.352687 TGATGGTTTCGGGTGGATTGA 59.647 47.619 0.00 0.00 0.00 2.57
363 364 2.025416 TGATGGTTTCGGGTGGATTGAT 60.025 45.455 0.00 0.00 0.00 2.57
364 365 1.832883 TGGTTTCGGGTGGATTGATG 58.167 50.000 0.00 0.00 0.00 3.07
365 366 1.074727 TGGTTTCGGGTGGATTGATGT 59.925 47.619 0.00 0.00 0.00 3.06
366 367 2.306219 TGGTTTCGGGTGGATTGATGTA 59.694 45.455 0.00 0.00 0.00 2.29
367 368 3.053991 TGGTTTCGGGTGGATTGATGTAT 60.054 43.478 0.00 0.00 0.00 2.29
368 369 3.315191 GGTTTCGGGTGGATTGATGTATG 59.685 47.826 0.00 0.00 0.00 2.39
369 370 3.924114 TTCGGGTGGATTGATGTATGT 57.076 42.857 0.00 0.00 0.00 2.29
370 371 3.924114 TCGGGTGGATTGATGTATGTT 57.076 42.857 0.00 0.00 0.00 2.71
371 372 3.804036 TCGGGTGGATTGATGTATGTTC 58.196 45.455 0.00 0.00 0.00 3.18
372 373 3.454447 TCGGGTGGATTGATGTATGTTCT 59.546 43.478 0.00 0.00 0.00 3.01
373 374 4.080582 TCGGGTGGATTGATGTATGTTCTT 60.081 41.667 0.00 0.00 0.00 2.52
374 375 4.035558 CGGGTGGATTGATGTATGTTCTTG 59.964 45.833 0.00 0.00 0.00 3.02
375 376 4.949856 GGGTGGATTGATGTATGTTCTTGT 59.050 41.667 0.00 0.00 0.00 3.16
376 377 5.066505 GGGTGGATTGATGTATGTTCTTGTC 59.933 44.000 0.00 0.00 0.00 3.18
377 378 5.647658 GGTGGATTGATGTATGTTCTTGTCA 59.352 40.000 0.00 0.00 0.00 3.58
378 379 6.183360 GGTGGATTGATGTATGTTCTTGTCAG 60.183 42.308 0.00 0.00 0.00 3.51
379 380 6.595326 GTGGATTGATGTATGTTCTTGTCAGA 59.405 38.462 0.00 0.00 0.00 3.27
380 381 6.595326 TGGATTGATGTATGTTCTTGTCAGAC 59.405 38.462 0.00 0.00 0.00 3.51
381 382 6.237942 GGATTGATGTATGTTCTTGTCAGACG 60.238 42.308 0.00 0.00 30.84 4.18
382 383 5.134202 TGATGTATGTTCTTGTCAGACGT 57.866 39.130 0.00 0.00 30.84 4.34
383 384 5.538118 TGATGTATGTTCTTGTCAGACGTT 58.462 37.500 0.00 0.00 30.84 3.99
384 385 5.989168 TGATGTATGTTCTTGTCAGACGTTT 59.011 36.000 0.00 0.00 30.84 3.60
385 386 5.651172 TGTATGTTCTTGTCAGACGTTTG 57.349 39.130 0.00 0.00 30.84 2.93
386 387 5.113383 TGTATGTTCTTGTCAGACGTTTGT 58.887 37.500 5.93 0.00 30.84 2.83
387 388 4.536364 ATGTTCTTGTCAGACGTTTGTG 57.464 40.909 5.93 0.00 0.00 3.33
388 389 2.095213 TGTTCTTGTCAGACGTTTGTGC 59.905 45.455 5.93 1.71 0.00 4.57
389 390 2.017138 TCTTGTCAGACGTTTGTGCA 57.983 45.000 5.93 4.26 0.00 4.57
390 391 2.351455 TCTTGTCAGACGTTTGTGCAA 58.649 42.857 5.93 11.13 0.00 4.08
391 392 2.942376 TCTTGTCAGACGTTTGTGCAAT 59.058 40.909 14.87 0.00 0.00 3.56
392 393 4.123506 TCTTGTCAGACGTTTGTGCAATA 58.876 39.130 14.87 8.63 0.00 1.90
393 394 4.572795 TCTTGTCAGACGTTTGTGCAATAA 59.427 37.500 14.87 7.65 0.00 1.40
394 395 5.238432 TCTTGTCAGACGTTTGTGCAATAAT 59.762 36.000 14.87 0.00 0.00 1.28
395 396 5.431420 TGTCAGACGTTTGTGCAATAATT 57.569 34.783 5.93 0.00 0.00 1.40
396 397 6.546972 TGTCAGACGTTTGTGCAATAATTA 57.453 33.333 5.93 0.00 0.00 1.40
397 398 6.960468 TGTCAGACGTTTGTGCAATAATTAA 58.040 32.000 5.93 0.00 0.00 1.40
398 399 7.589395 TGTCAGACGTTTGTGCAATAATTAAT 58.411 30.769 5.93 0.00 0.00 1.40
399 400 8.722394 TGTCAGACGTTTGTGCAATAATTAATA 58.278 29.630 5.93 0.00 0.00 0.98
400 401 9.549509 GTCAGACGTTTGTGCAATAATTAATAA 57.450 29.630 5.93 0.00 0.00 1.40
409 410 9.531942 TTGTGCAATAATTAATAAAGATGGCTG 57.468 29.630 0.00 0.00 0.00 4.85
410 411 7.652909 TGTGCAATAATTAATAAAGATGGCTGC 59.347 33.333 0.00 0.00 0.00 5.25
411 412 7.652909 GTGCAATAATTAATAAAGATGGCTGCA 59.347 33.333 0.50 0.00 0.00 4.41
412 413 8.369424 TGCAATAATTAATAAAGATGGCTGCAT 58.631 29.630 0.50 0.00 0.00 3.96
413 414 8.653338 GCAATAATTAATAAAGATGGCTGCATG 58.347 33.333 0.50 0.00 0.00 4.06
414 415 8.653338 CAATAATTAATAAAGATGGCTGCATGC 58.347 33.333 11.82 11.82 41.94 4.06
415 416 5.794726 ATTAATAAAGATGGCTGCATGCA 57.205 34.783 21.29 21.29 45.15 3.96
416 417 5.794726 TTAATAAAGATGGCTGCATGCAT 57.205 34.783 22.97 5.92 45.15 3.96
417 418 3.936372 ATAAAGATGGCTGCATGCATC 57.064 42.857 22.97 17.75 45.15 3.91
418 419 0.384309 AAAGATGGCTGCATGCATCG 59.616 50.000 22.97 12.00 45.15 3.84
419 420 0.464916 AAGATGGCTGCATGCATCGA 60.465 50.000 22.97 15.35 45.15 3.59
420 421 0.250770 AGATGGCTGCATGCATCGAT 60.251 50.000 22.97 19.82 45.15 3.59
421 422 0.596577 GATGGCTGCATGCATCGATT 59.403 50.000 22.97 5.00 45.15 3.34
422 423 0.313987 ATGGCTGCATGCATCGATTG 59.686 50.000 22.97 9.56 45.15 2.67
423 424 0.748729 TGGCTGCATGCATCGATTGA 60.749 50.000 22.97 0.00 45.15 2.57
424 425 0.596577 GGCTGCATGCATCGATTGAT 59.403 50.000 22.97 0.00 45.15 2.57
443 444 2.568003 GCAGAGGCAGGGGTTTAAC 58.432 57.895 0.00 0.00 40.72 2.01
444 445 0.965866 GCAGAGGCAGGGGTTTAACC 60.966 60.000 5.40 5.40 40.72 2.85
445 446 0.698818 CAGAGGCAGGGGTTTAACCT 59.301 55.000 14.27 0.00 38.64 3.50
446 447 0.992695 AGAGGCAGGGGTTTAACCTC 59.007 55.000 14.27 10.36 45.99 3.85
447 448 0.034380 GAGGCAGGGGTTTAACCTCC 60.034 60.000 10.86 11.50 40.56 4.30
448 449 0.477795 AGGCAGGGGTTTAACCTCCT 60.478 55.000 10.86 13.57 40.56 3.69
449 450 0.408309 GGCAGGGGTTTAACCTCCTT 59.592 55.000 17.59 0.00 40.56 3.36
450 451 1.203137 GGCAGGGGTTTAACCTCCTTT 60.203 52.381 17.59 0.00 40.56 3.11
451 452 2.605257 GCAGGGGTTTAACCTCCTTTT 58.395 47.619 17.59 0.00 40.56 2.27
452 453 2.969950 GCAGGGGTTTAACCTCCTTTTT 59.030 45.455 17.59 0.00 40.56 1.94
453 454 4.154176 GCAGGGGTTTAACCTCCTTTTTA 58.846 43.478 17.59 0.00 40.56 1.52
454 455 4.589798 GCAGGGGTTTAACCTCCTTTTTAA 59.410 41.667 17.59 0.00 40.56 1.52
455 456 5.070714 GCAGGGGTTTAACCTCCTTTTTAAA 59.929 40.000 17.59 0.00 40.56 1.52
456 457 6.408320 GCAGGGGTTTAACCTCCTTTTTAAAA 60.408 38.462 17.59 0.00 40.56 1.52
457 458 7.566569 CAGGGGTTTAACCTCCTTTTTAAAAA 58.433 34.615 17.59 12.62 40.56 1.94
486 487 5.133660 TGGTAAGCAATGATATTACCCCAGT 59.866 40.000 15.22 0.00 45.17 4.00
487 488 5.473504 GGTAAGCAATGATATTACCCCAGTG 59.526 44.000 9.80 0.00 41.65 3.66
488 489 4.104383 AGCAATGATATTACCCCAGTGG 57.896 45.455 0.63 0.63 41.37 4.00
489 490 2.558359 GCAATGATATTACCCCAGTGGC 59.442 50.000 2.61 0.00 37.83 5.01
490 491 3.831323 CAATGATATTACCCCAGTGGCA 58.169 45.455 2.61 0.00 37.83 4.92
491 492 4.410099 CAATGATATTACCCCAGTGGCAT 58.590 43.478 2.61 0.00 37.83 4.40
492 493 3.507162 TGATATTACCCCAGTGGCATG 57.493 47.619 2.61 0.00 37.83 4.06
1077 1086 2.409651 CGAGTCCTAGCAGGCGTC 59.590 66.667 0.00 0.00 34.61 5.19
1140 1149 2.764128 GGGACGGCAGGGATGAGA 60.764 66.667 0.00 0.00 0.00 3.27
1386 1398 4.657824 CACGTCGTGTCGGGCCTT 62.658 66.667 17.30 0.00 34.94 4.35
1707 1728 0.540597 TCCCTGGATGCGATCGATCT 60.541 55.000 21.57 4.53 0.00 2.75
1765 1787 1.533625 CGTGAGCATTTTTCTCCCCA 58.466 50.000 0.00 0.00 0.00 4.96
1766 1788 1.470098 CGTGAGCATTTTTCTCCCCAG 59.530 52.381 0.00 0.00 0.00 4.45
1767 1789 2.519013 GTGAGCATTTTTCTCCCCAGT 58.481 47.619 0.00 0.00 0.00 4.00
1769 1791 2.892852 TGAGCATTTTTCTCCCCAGTTG 59.107 45.455 0.00 0.00 0.00 3.16
1770 1792 1.620323 AGCATTTTTCTCCCCAGTTGC 59.380 47.619 0.00 0.00 0.00 4.17
1805 1827 2.878406 CACATTTGACCACCTCGTTTCT 59.122 45.455 0.00 0.00 0.00 2.52
1844 1870 0.918258 TTGTGAGATGCATGCCCCTA 59.082 50.000 16.68 0.00 0.00 3.53
1980 2006 6.257849 ACACGCAAAGTATATTCATCGACATT 59.742 34.615 0.00 0.00 0.00 2.71
1985 2011 8.935844 GCAAAGTATATTCATCGACATTGGATA 58.064 33.333 0.00 0.00 0.00 2.59
1997 2023 9.338291 CATCGACATTGGATATTCATTGATTTC 57.662 33.333 11.96 0.44 0.00 2.17
1998 2024 7.575365 TCGACATTGGATATTCATTGATTTCG 58.425 34.615 11.96 10.55 0.00 3.46
1999 2025 7.440856 TCGACATTGGATATTCATTGATTTCGA 59.559 33.333 11.96 12.27 0.00 3.71
2000 2026 7.531871 CGACATTGGATATTCATTGATTTCGAC 59.468 37.037 11.96 0.00 0.00 4.20
2001 2027 7.651808 ACATTGGATATTCATTGATTTCGACC 58.348 34.615 11.96 0.00 0.00 4.79
2002 2028 6.633500 TTGGATATTCATTGATTTCGACCC 57.367 37.500 0.00 0.00 0.00 4.46
2003 2029 5.070001 TGGATATTCATTGATTTCGACCCC 58.930 41.667 0.00 0.00 0.00 4.95
2006 2032 4.989279 ATTCATTGATTTCGACCCCTTG 57.011 40.909 0.00 0.00 0.00 3.61
2011 2047 0.521735 GATTTCGACCCCTTGTGTGC 59.478 55.000 0.00 0.00 0.00 4.57
2040 2080 8.962884 TGAGCATAGCTAATCAAGAACAATAA 57.037 30.769 0.00 0.00 39.88 1.40
2086 2126 2.556257 TCGAGCTTGTTAAACTGCACA 58.444 42.857 0.00 0.00 0.00 4.57
2087 2127 2.286833 TCGAGCTTGTTAAACTGCACAC 59.713 45.455 0.00 0.00 0.00 3.82
2099 2139 2.509336 GCACACGCATCGGTAGCT 60.509 61.111 0.00 0.00 38.36 3.32
2116 2156 5.050091 CGGTAGCTAGCACAAGAAATAATGG 60.050 44.000 21.99 0.00 0.00 3.16
2161 2206 1.257743 TGTGTGTCTCCTAGCTGGTC 58.742 55.000 0.00 0.00 37.07 4.02
2226 2271 7.996758 ACTCCCTCAGGAAAGAAATATAAGA 57.003 36.000 0.00 0.00 43.40 2.10
2227 2272 8.393959 ACTCCCTCAGGAAAGAAATATAAGAA 57.606 34.615 0.00 0.00 43.40 2.52
2228 2273 9.008584 ACTCCCTCAGGAAAGAAATATAAGAAT 57.991 33.333 0.00 0.00 43.40 2.40
2229 2274 9.282569 CTCCCTCAGGAAAGAAATATAAGAATG 57.717 37.037 0.00 0.00 43.40 2.67
2230 2275 8.781951 TCCCTCAGGAAAGAAATATAAGAATGT 58.218 33.333 0.00 0.00 40.08 2.71
2231 2276 9.413734 CCCTCAGGAAAGAAATATAAGAATGTT 57.586 33.333 0.00 0.00 33.47 2.71
2262 2307 9.595823 TCTAAACACTCTTATATTTCTTTCCGG 57.404 33.333 0.00 0.00 0.00 5.14
2263 2308 9.595823 CTAAACACTCTTATATTTCTTTCCGGA 57.404 33.333 0.00 0.00 0.00 5.14
2264 2309 8.494016 AAACACTCTTATATTTCTTTCCGGAG 57.506 34.615 3.34 0.00 0.00 4.63
2401 2470 3.963383 AATTAAACTAAGCGGCCGATG 57.037 42.857 33.48 15.38 0.00 3.84
2412 2483 0.884259 CGGCCGATGCATGAACCATA 60.884 55.000 24.07 0.00 40.13 2.74
2438 2509 6.722301 TCTCTCCTACGACAATGTATAAACG 58.278 40.000 0.00 0.00 0.00 3.60
2445 2516 5.974300 ACGACAATGTATAAACGATGATGC 58.026 37.500 0.00 0.00 0.00 3.91
2671 2796 1.195115 TGCTCCCTCGAGTAGCATTT 58.805 50.000 26.91 0.00 41.15 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.114627 ATCAGGCATGACTCAGCGTA 58.885 50.000 1.71 0.00 38.57 4.42
11 12 0.251354 AATCAGGCATGACTCAGCGT 59.749 50.000 1.71 0.00 38.57 5.07
12 13 0.656259 CAATCAGGCATGACTCAGCG 59.344 55.000 1.71 0.00 38.57 5.18
24 25 0.729116 CGTAGCACTTGCCAATCAGG 59.271 55.000 0.00 0.00 43.38 3.86
43 44 3.439476 AGTCTTTGCAAGATCTGTCATGC 59.561 43.478 9.71 9.71 46.40 4.06
44 45 5.624344 AAGTCTTTGCAAGATCTGTCATG 57.376 39.130 0.00 0.00 40.18 3.07
45 46 4.391216 CGAAGTCTTTGCAAGATCTGTCAT 59.609 41.667 0.00 0.00 40.18 3.06
46 47 3.742882 CGAAGTCTTTGCAAGATCTGTCA 59.257 43.478 0.00 0.00 40.18 3.58
47 48 3.424170 GCGAAGTCTTTGCAAGATCTGTC 60.424 47.826 18.40 0.00 40.18 3.51
48 49 2.481952 GCGAAGTCTTTGCAAGATCTGT 59.518 45.455 18.40 0.00 40.18 3.41
49 50 2.473540 CGCGAAGTCTTTGCAAGATCTG 60.474 50.000 22.05 3.01 40.18 2.90
50 51 1.728971 CGCGAAGTCTTTGCAAGATCT 59.271 47.619 22.05 0.00 40.18 2.75
51 52 1.461127 ACGCGAAGTCTTTGCAAGATC 59.539 47.619 22.05 0.00 40.18 2.75
52 53 1.512926 ACGCGAAGTCTTTGCAAGAT 58.487 45.000 22.05 4.28 40.18 2.40
53 54 1.295792 AACGCGAAGTCTTTGCAAGA 58.704 45.000 22.05 0.00 40.16 3.02
54 55 1.775208 CAAACGCGAAGTCTTTGCAAG 59.225 47.619 22.05 10.92 40.16 4.01
55 56 1.398739 TCAAACGCGAAGTCTTTGCAA 59.601 42.857 22.05 0.00 40.16 4.08
56 57 1.010580 TCAAACGCGAAGTCTTTGCA 58.989 45.000 22.05 2.11 40.16 4.08
57 58 1.385999 GTCAAACGCGAAGTCTTTGC 58.614 50.000 15.93 14.06 36.69 3.68
58 59 1.647748 CGTCAAACGCGAAGTCTTTG 58.352 50.000 15.93 13.18 33.65 2.77
59 60 0.580104 CCGTCAAACGCGAAGTCTTT 59.420 50.000 15.93 0.00 40.91 2.52
60 61 0.249155 TCCGTCAAACGCGAAGTCTT 60.249 50.000 15.93 0.00 40.91 3.01
61 62 0.038526 ATCCGTCAAACGCGAAGTCT 60.039 50.000 15.93 0.00 40.91 3.24
62 63 0.093026 CATCCGTCAAACGCGAAGTC 59.907 55.000 15.93 0.00 40.91 3.01
63 64 0.319211 TCATCCGTCAAACGCGAAGT 60.319 50.000 15.93 0.00 40.91 3.01
64 65 0.366871 CTCATCCGTCAAACGCGAAG 59.633 55.000 15.93 1.22 40.91 3.79
65 66 1.623081 GCTCATCCGTCAAACGCGAA 61.623 55.000 15.93 0.00 40.91 4.70
66 67 2.092291 GCTCATCCGTCAAACGCGA 61.092 57.895 15.93 0.00 40.91 5.87
67 68 2.395690 GCTCATCCGTCAAACGCG 59.604 61.111 3.53 3.53 40.91 6.01
68 69 2.395690 CGCTCATCCGTCAAACGC 59.604 61.111 0.00 0.00 40.91 4.84
69 70 2.283780 CTGCGCTCATCCGTCAAACG 62.284 60.000 9.73 0.00 42.11 3.60
70 71 1.421485 CTGCGCTCATCCGTCAAAC 59.579 57.895 9.73 0.00 0.00 2.93
71 72 1.741401 CCTGCGCTCATCCGTCAAA 60.741 57.895 9.73 0.00 0.00 2.69
72 73 2.125552 CCTGCGCTCATCCGTCAA 60.126 61.111 9.73 0.00 0.00 3.18
73 74 4.147449 CCCTGCGCTCATCCGTCA 62.147 66.667 9.73 0.00 0.00 4.35
99 100 3.202001 CACCATGGCGCCTAACGG 61.202 66.667 29.70 23.06 43.93 4.44
109 110 3.430862 CCGTTGACGCCACCATGG 61.431 66.667 11.19 11.19 41.55 3.66
110 111 1.745115 ATCCGTTGACGCCACCATG 60.745 57.895 0.00 0.00 38.18 3.66
111 112 1.745115 CATCCGTTGACGCCACCAT 60.745 57.895 0.00 0.00 38.18 3.55
112 113 2.358125 CATCCGTTGACGCCACCA 60.358 61.111 0.00 0.00 38.18 4.17
113 114 2.358247 ACATCCGTTGACGCCACC 60.358 61.111 0.00 0.00 38.18 4.61
114 115 2.388232 GGACATCCGTTGACGCCAC 61.388 63.158 0.00 0.00 38.18 5.01
115 116 2.047655 GGACATCCGTTGACGCCA 60.048 61.111 0.00 0.00 38.18 5.69
125 126 1.026718 CCTTGCCAGTTCGGACATCC 61.027 60.000 0.00 0.00 36.56 3.51
126 127 0.036388 TCCTTGCCAGTTCGGACATC 60.036 55.000 0.00 0.00 36.56 3.06
127 128 0.620556 ATCCTTGCCAGTTCGGACAT 59.379 50.000 0.00 0.00 36.56 3.06
128 129 0.321564 CATCCTTGCCAGTTCGGACA 60.322 55.000 0.00 0.00 36.56 4.02
129 130 0.036388 TCATCCTTGCCAGTTCGGAC 60.036 55.000 0.00 0.00 36.56 4.79
130 131 0.911769 ATCATCCTTGCCAGTTCGGA 59.088 50.000 0.00 0.00 36.56 4.55
131 132 1.019673 CATCATCCTTGCCAGTTCGG 58.980 55.000 0.00 0.00 38.11 4.30
132 133 0.379669 GCATCATCCTTGCCAGTTCG 59.620 55.000 0.00 0.00 33.95 3.95
133 134 0.379669 CGCATCATCCTTGCCAGTTC 59.620 55.000 0.00 0.00 36.75 3.01
134 135 1.033746 CCGCATCATCCTTGCCAGTT 61.034 55.000 0.00 0.00 36.75 3.16
135 136 1.452651 CCGCATCATCCTTGCCAGT 60.453 57.895 0.00 0.00 36.75 4.00
136 137 0.536687 ATCCGCATCATCCTTGCCAG 60.537 55.000 0.00 0.00 36.75 4.85
137 138 0.535780 GATCCGCATCATCCTTGCCA 60.536 55.000 0.00 0.00 36.75 4.92
138 139 0.250640 AGATCCGCATCATCCTTGCC 60.251 55.000 0.00 0.00 36.75 4.52
139 140 1.155042 GAGATCCGCATCATCCTTGC 58.845 55.000 0.00 0.00 36.74 4.01
140 141 2.612471 GGAGAGATCCGCATCATCCTTG 60.612 54.545 3.89 0.00 35.59 3.61
141 142 1.622811 GGAGAGATCCGCATCATCCTT 59.377 52.381 3.89 0.00 35.59 3.36
142 143 1.203162 AGGAGAGATCCGCATCATCCT 60.203 52.381 7.19 7.19 40.35 3.24
143 144 1.067000 CAGGAGAGATCCGCATCATCC 60.067 57.143 3.05 3.05 37.40 3.51
144 145 1.891811 TCAGGAGAGATCCGCATCATC 59.108 52.381 0.00 0.00 34.28 2.92
145 146 2.006805 TCAGGAGAGATCCGCATCAT 57.993 50.000 0.00 0.00 34.28 2.45
146 147 1.685517 CTTCAGGAGAGATCCGCATCA 59.314 52.381 0.00 0.00 34.28 3.07
147 148 1.959985 TCTTCAGGAGAGATCCGCATC 59.040 52.381 0.00 0.00 34.28 3.91
148 149 2.079170 TCTTCAGGAGAGATCCGCAT 57.921 50.000 0.00 0.00 34.28 4.73
149 150 1.685517 CATCTTCAGGAGAGATCCGCA 59.314 52.381 0.00 0.00 37.93 5.69
150 151 1.000731 CCATCTTCAGGAGAGATCCGC 59.999 57.143 0.00 0.00 37.93 5.54
151 152 1.617850 CCCATCTTCAGGAGAGATCCG 59.382 57.143 0.00 0.00 37.93 4.18
152 153 2.632512 GACCCATCTTCAGGAGAGATCC 59.367 54.545 0.00 0.00 37.93 3.36
153 154 3.303938 TGACCCATCTTCAGGAGAGATC 58.696 50.000 0.00 0.00 37.93 2.75
154 155 3.307506 CTGACCCATCTTCAGGAGAGAT 58.692 50.000 0.00 0.00 37.93 2.75
155 156 2.043664 ACTGACCCATCTTCAGGAGAGA 59.956 50.000 4.48 0.00 44.19 3.10
156 157 2.168106 CACTGACCCATCTTCAGGAGAG 59.832 54.545 4.48 0.00 44.19 3.20
157 158 2.182827 CACTGACCCATCTTCAGGAGA 58.817 52.381 4.48 0.00 44.19 3.71
158 159 1.209019 CCACTGACCCATCTTCAGGAG 59.791 57.143 4.48 0.00 44.19 3.69
159 160 1.279496 CCACTGACCCATCTTCAGGA 58.721 55.000 4.48 0.00 44.19 3.86
160 161 0.987294 ACCACTGACCCATCTTCAGG 59.013 55.000 4.48 0.00 44.19 3.86
161 162 1.065854 GGACCACTGACCCATCTTCAG 60.066 57.143 0.00 0.00 45.21 3.02
162 163 0.984230 GGACCACTGACCCATCTTCA 59.016 55.000 0.00 0.00 0.00 3.02
163 164 0.984230 TGGACCACTGACCCATCTTC 59.016 55.000 0.00 0.00 0.00 2.87
164 165 1.444933 TTGGACCACTGACCCATCTT 58.555 50.000 0.00 0.00 0.00 2.40
165 166 1.283029 CATTGGACCACTGACCCATCT 59.717 52.381 5.94 0.00 0.00 2.90
166 167 1.281867 TCATTGGACCACTGACCCATC 59.718 52.381 10.34 0.00 0.00 3.51
167 168 1.371467 TCATTGGACCACTGACCCAT 58.629 50.000 10.34 0.00 0.00 4.00
168 169 1.004628 CATCATTGGACCACTGACCCA 59.995 52.381 16.13 0.00 0.00 4.51
169 170 1.281867 TCATCATTGGACCACTGACCC 59.718 52.381 16.13 0.00 0.00 4.46
170 171 2.787473 TCATCATTGGACCACTGACC 57.213 50.000 16.13 0.00 0.00 4.02
171 172 2.947652 CCATCATCATTGGACCACTGAC 59.052 50.000 16.13 0.00 36.26 3.51
172 173 2.684630 GCCATCATCATTGGACCACTGA 60.685 50.000 16.14 16.14 36.26 3.41
173 174 1.679680 GCCATCATCATTGGACCACTG 59.320 52.381 5.47 5.47 36.26 3.66
174 175 1.748244 CGCCATCATCATTGGACCACT 60.748 52.381 0.00 0.00 36.26 4.00
175 176 0.664761 CGCCATCATCATTGGACCAC 59.335 55.000 0.00 0.00 36.26 4.16
176 177 0.466007 CCGCCATCATCATTGGACCA 60.466 55.000 0.00 0.00 36.26 4.02
177 178 1.799258 GCCGCCATCATCATTGGACC 61.799 60.000 0.00 0.00 36.26 4.46
178 179 0.820891 AGCCGCCATCATCATTGGAC 60.821 55.000 0.00 0.00 36.26 4.02
179 180 0.535780 GAGCCGCCATCATCATTGGA 60.536 55.000 0.00 0.00 36.26 3.53
180 181 1.521450 GGAGCCGCCATCATCATTGG 61.521 60.000 0.00 0.00 37.31 3.16
181 182 0.536687 AGGAGCCGCCATCATCATTG 60.537 55.000 0.00 0.00 40.02 2.82
182 183 1.059098 TAGGAGCCGCCATCATCATT 58.941 50.000 0.00 0.00 40.02 2.57
183 184 1.059098 TTAGGAGCCGCCATCATCAT 58.941 50.000 0.00 0.00 40.02 2.45
184 185 0.836606 TTTAGGAGCCGCCATCATCA 59.163 50.000 0.00 0.00 40.02 3.07
185 186 1.604278 GTTTTAGGAGCCGCCATCATC 59.396 52.381 0.00 0.00 40.02 2.92
186 187 1.680338 GTTTTAGGAGCCGCCATCAT 58.320 50.000 0.00 0.00 40.02 2.45
187 188 0.742990 CGTTTTAGGAGCCGCCATCA 60.743 55.000 0.00 0.00 40.02 3.07
188 189 0.743345 ACGTTTTAGGAGCCGCCATC 60.743 55.000 0.00 0.00 40.02 3.51
189 190 1.024579 CACGTTTTAGGAGCCGCCAT 61.025 55.000 0.00 0.00 40.02 4.40
190 191 1.669760 CACGTTTTAGGAGCCGCCA 60.670 57.895 0.00 0.00 40.02 5.69
191 192 1.670083 ACACGTTTTAGGAGCCGCC 60.670 57.895 0.00 0.00 0.00 6.13
192 193 1.495951 CACACGTTTTAGGAGCCGC 59.504 57.895 0.00 0.00 0.00 6.53
193 194 1.225376 TGCACACGTTTTAGGAGCCG 61.225 55.000 0.00 0.00 0.00 5.52
194 195 1.135689 CATGCACACGTTTTAGGAGCC 60.136 52.381 0.00 0.00 0.00 4.70
195 196 1.535462 ACATGCACACGTTTTAGGAGC 59.465 47.619 0.00 0.00 0.00 4.70
196 197 2.805671 TCACATGCACACGTTTTAGGAG 59.194 45.455 0.00 0.00 0.00 3.69
197 198 2.839975 TCACATGCACACGTTTTAGGA 58.160 42.857 0.00 0.00 0.00 2.94
198 199 3.058293 ACATCACATGCACACGTTTTAGG 60.058 43.478 0.00 0.00 0.00 2.69
199 200 3.907788 CACATCACATGCACACGTTTTAG 59.092 43.478 0.00 0.00 0.00 1.85
200 201 3.851471 GCACATCACATGCACACGTTTTA 60.851 43.478 0.00 0.00 42.88 1.52
201 202 2.730069 CACATCACATGCACACGTTTT 58.270 42.857 0.00 0.00 0.00 2.43
202 203 1.600164 GCACATCACATGCACACGTTT 60.600 47.619 0.00 0.00 42.88 3.60
203 204 0.040157 GCACATCACATGCACACGTT 60.040 50.000 0.00 0.00 42.88 3.99
204 205 1.575922 GCACATCACATGCACACGT 59.424 52.632 0.00 0.00 42.88 4.49
205 206 1.510414 CGCACATCACATGCACACG 60.510 57.895 0.00 0.00 43.57 4.49
206 207 1.798725 GCGCACATCACATGCACAC 60.799 57.895 0.30 0.00 43.57 3.82
207 208 1.517210 AAGCGCACATCACATGCACA 61.517 50.000 11.47 0.00 43.57 4.57
208 209 0.387622 AAAGCGCACATCACATGCAC 60.388 50.000 11.47 0.00 43.57 4.57
209 210 1.130938 CTAAAGCGCACATCACATGCA 59.869 47.619 11.47 0.00 43.57 3.96
210 211 1.131126 ACTAAAGCGCACATCACATGC 59.869 47.619 11.47 0.00 39.81 4.06
211 212 3.001634 CCTACTAAAGCGCACATCACATG 59.998 47.826 11.47 0.00 0.00 3.21
212 213 3.198068 CCTACTAAAGCGCACATCACAT 58.802 45.455 11.47 0.00 0.00 3.21
213 214 2.616960 CCTACTAAAGCGCACATCACA 58.383 47.619 11.47 0.00 0.00 3.58
214 215 1.327764 GCCTACTAAAGCGCACATCAC 59.672 52.381 11.47 0.00 0.00 3.06
215 216 1.207089 AGCCTACTAAAGCGCACATCA 59.793 47.619 11.47 0.00 0.00 3.07
216 217 1.594862 CAGCCTACTAAAGCGCACATC 59.405 52.381 11.47 0.00 0.00 3.06
217 218 1.656652 CAGCCTACTAAAGCGCACAT 58.343 50.000 11.47 0.00 0.00 3.21
218 219 1.019278 GCAGCCTACTAAAGCGCACA 61.019 55.000 11.47 0.00 0.00 4.57
219 220 1.019278 TGCAGCCTACTAAAGCGCAC 61.019 55.000 11.47 0.00 35.00 5.34
220 221 1.019278 GTGCAGCCTACTAAAGCGCA 61.019 55.000 11.47 0.00 36.62 6.09
221 222 1.706287 GGTGCAGCCTACTAAAGCGC 61.706 60.000 4.03 0.00 35.15 5.92
222 223 1.421410 CGGTGCAGCCTACTAAAGCG 61.421 60.000 10.90 0.00 34.25 4.68
223 224 0.108329 TCGGTGCAGCCTACTAAAGC 60.108 55.000 10.90 0.00 34.25 3.51
224 225 2.380084 TTCGGTGCAGCCTACTAAAG 57.620 50.000 10.90 0.00 34.25 1.85
225 226 2.027561 ACATTCGGTGCAGCCTACTAAA 60.028 45.455 10.90 0.00 34.25 1.85
226 227 1.553248 ACATTCGGTGCAGCCTACTAA 59.447 47.619 10.90 0.00 34.25 2.24
227 228 1.191535 ACATTCGGTGCAGCCTACTA 58.808 50.000 10.90 0.00 34.25 1.82
228 229 0.324943 AACATTCGGTGCAGCCTACT 59.675 50.000 10.90 0.00 34.25 2.57
229 230 0.447801 CAACATTCGGTGCAGCCTAC 59.552 55.000 10.90 0.00 34.25 3.18
230 231 0.323302 TCAACATTCGGTGCAGCCTA 59.677 50.000 10.90 0.00 34.25 3.93
231 232 0.322816 ATCAACATTCGGTGCAGCCT 60.323 50.000 10.90 0.00 34.25 4.58
232 233 0.099436 GATCAACATTCGGTGCAGCC 59.901 55.000 10.90 2.64 0.00 4.85
233 234 1.063174 GAGATCAACATTCGGTGCAGC 59.937 52.381 5.64 5.64 0.00 5.25
234 235 1.325640 CGAGATCAACATTCGGTGCAG 59.674 52.381 0.00 0.00 0.00 4.41
235 236 1.067213 TCGAGATCAACATTCGGTGCA 60.067 47.619 0.00 0.00 35.21 4.57
236 237 1.640428 TCGAGATCAACATTCGGTGC 58.360 50.000 0.00 0.00 35.21 5.01
237 238 3.422217 CGTATCGAGATCAACATTCGGTG 59.578 47.826 0.00 0.00 35.21 4.94
238 239 3.066342 ACGTATCGAGATCAACATTCGGT 59.934 43.478 0.00 0.00 35.21 4.69
239 240 3.629058 ACGTATCGAGATCAACATTCGG 58.371 45.455 0.00 0.00 35.21 4.30
240 241 6.359883 ACATAACGTATCGAGATCAACATTCG 59.640 38.462 0.00 0.00 35.76 3.34
241 242 7.358435 CCACATAACGTATCGAGATCAACATTC 60.358 40.741 0.00 0.00 0.00 2.67
242 243 6.420903 CCACATAACGTATCGAGATCAACATT 59.579 38.462 0.00 0.00 0.00 2.71
243 244 5.920840 CCACATAACGTATCGAGATCAACAT 59.079 40.000 0.00 0.00 0.00 2.71
244 245 5.066764 TCCACATAACGTATCGAGATCAACA 59.933 40.000 0.00 0.00 0.00 3.33
245 246 5.516996 TCCACATAACGTATCGAGATCAAC 58.483 41.667 0.00 0.00 0.00 3.18
246 247 5.761165 TCCACATAACGTATCGAGATCAA 57.239 39.130 0.00 0.00 0.00 2.57
247 248 5.335661 CCATCCACATAACGTATCGAGATCA 60.336 44.000 0.00 0.00 0.00 2.92
248 249 5.096169 CCATCCACATAACGTATCGAGATC 58.904 45.833 0.00 0.00 0.00 2.75
249 250 4.765339 TCCATCCACATAACGTATCGAGAT 59.235 41.667 0.00 0.00 0.00 2.75
250 251 4.139038 TCCATCCACATAACGTATCGAGA 58.861 43.478 0.00 0.00 0.00 4.04
251 252 4.499037 TCCATCCACATAACGTATCGAG 57.501 45.455 0.00 0.00 0.00 4.04
252 253 4.379082 CGATCCATCCACATAACGTATCGA 60.379 45.833 3.53 0.00 36.67 3.59
253 254 3.851969 CGATCCATCCACATAACGTATCG 59.148 47.826 0.00 0.00 0.00 2.92
254 255 4.174009 CCGATCCATCCACATAACGTATC 58.826 47.826 0.00 0.00 0.00 2.24
255 256 3.616560 GCCGATCCATCCACATAACGTAT 60.617 47.826 0.00 0.00 0.00 3.06
256 257 2.288579 GCCGATCCATCCACATAACGTA 60.289 50.000 0.00 0.00 0.00 3.57
257 258 1.540363 GCCGATCCATCCACATAACGT 60.540 52.381 0.00 0.00 0.00 3.99
258 259 1.148310 GCCGATCCATCCACATAACG 58.852 55.000 0.00 0.00 0.00 3.18
259 260 1.148310 CGCCGATCCATCCACATAAC 58.852 55.000 0.00 0.00 0.00 1.89
260 261 1.044611 TCGCCGATCCATCCACATAA 58.955 50.000 0.00 0.00 0.00 1.90
261 262 0.317160 GTCGCCGATCCATCCACATA 59.683 55.000 0.00 0.00 0.00 2.29
262 263 1.069765 GTCGCCGATCCATCCACAT 59.930 57.895 0.00 0.00 0.00 3.21
263 264 2.499205 GTCGCCGATCCATCCACA 59.501 61.111 0.00 0.00 0.00 4.17
264 265 2.658593 CGTCGCCGATCCATCCAC 60.659 66.667 0.00 0.00 35.63 4.02
265 266 2.831284 TCGTCGCCGATCCATCCA 60.831 61.111 0.00 0.00 38.40 3.41
266 267 2.354773 GTCGTCGCCGATCCATCC 60.355 66.667 0.00 0.00 46.30 3.51
267 268 1.944676 GTGTCGTCGCCGATCCATC 60.945 63.158 0.00 0.00 46.30 3.51
268 269 2.104331 GTGTCGTCGCCGATCCAT 59.896 61.111 0.00 0.00 46.30 3.41
269 270 4.124351 GGTGTCGTCGCCGATCCA 62.124 66.667 0.00 0.00 46.30 3.41
275 276 1.620413 CTAAAACCGGTGTCGTCGCC 61.620 60.000 8.52 1.83 40.52 5.54
276 277 0.664166 TCTAAAACCGGTGTCGTCGC 60.664 55.000 8.52 0.00 33.95 5.19
277 278 1.986698 ATCTAAAACCGGTGTCGTCG 58.013 50.000 8.52 0.00 33.95 5.12
278 279 3.800506 CCATATCTAAAACCGGTGTCGTC 59.199 47.826 8.52 0.00 33.95 4.20
279 280 3.431207 CCCATATCTAAAACCGGTGTCGT 60.431 47.826 8.52 0.00 33.95 4.34
280 281 3.128349 CCCATATCTAAAACCGGTGTCG 58.872 50.000 8.52 0.00 0.00 4.35
281 282 3.135167 TCCCCATATCTAAAACCGGTGTC 59.865 47.826 8.52 0.00 0.00 3.67
282 283 3.116959 TCCCCATATCTAAAACCGGTGT 58.883 45.455 8.52 0.00 0.00 4.16
283 284 3.135895 ACTCCCCATATCTAAAACCGGTG 59.864 47.826 8.52 0.00 0.00 4.94
284 285 3.135895 CACTCCCCATATCTAAAACCGGT 59.864 47.826 0.00 0.00 0.00 5.28
285 286 3.389983 TCACTCCCCATATCTAAAACCGG 59.610 47.826 0.00 0.00 0.00 5.28
286 287 4.344102 TCTCACTCCCCATATCTAAAACCG 59.656 45.833 0.00 0.00 0.00 4.44
287 288 5.743422 GCTCTCACTCCCCATATCTAAAACC 60.743 48.000 0.00 0.00 0.00 3.27
288 289 5.163301 TGCTCTCACTCCCCATATCTAAAAC 60.163 44.000 0.00 0.00 0.00 2.43
289 290 4.968719 TGCTCTCACTCCCCATATCTAAAA 59.031 41.667 0.00 0.00 0.00 1.52
290 291 4.345257 GTGCTCTCACTCCCCATATCTAAA 59.655 45.833 0.00 0.00 40.03 1.85
291 292 3.898123 GTGCTCTCACTCCCCATATCTAA 59.102 47.826 0.00 0.00 40.03 2.10
292 293 3.501349 GTGCTCTCACTCCCCATATCTA 58.499 50.000 0.00 0.00 40.03 1.98
293 294 2.324541 GTGCTCTCACTCCCCATATCT 58.675 52.381 0.00 0.00 40.03 1.98
294 295 2.829741 GTGCTCTCACTCCCCATATC 57.170 55.000 0.00 0.00 40.03 1.63
304 305 3.567478 AATAATGGGGAGTGCTCTCAC 57.433 47.619 17.04 13.58 42.90 3.51
305 306 4.721776 ACTTAATAATGGGGAGTGCTCTCA 59.278 41.667 17.04 0.00 42.05 3.27
306 307 5.297569 ACTTAATAATGGGGAGTGCTCTC 57.702 43.478 7.26 7.26 39.76 3.20
307 308 5.717119 AACTTAATAATGGGGAGTGCTCT 57.283 39.130 0.00 0.00 0.00 4.09
308 309 5.652452 ACAAACTTAATAATGGGGAGTGCTC 59.348 40.000 0.00 0.00 0.00 4.26
309 310 5.580022 ACAAACTTAATAATGGGGAGTGCT 58.420 37.500 0.00 0.00 0.00 4.40
310 311 5.914898 ACAAACTTAATAATGGGGAGTGC 57.085 39.130 0.00 0.00 0.00 4.40
311 312 6.039382 GCCTACAAACTTAATAATGGGGAGTG 59.961 42.308 0.00 0.00 0.00 3.51
312 313 6.127101 GCCTACAAACTTAATAATGGGGAGT 58.873 40.000 0.00 0.00 0.00 3.85
313 314 5.238650 CGCCTACAAACTTAATAATGGGGAG 59.761 44.000 0.00 0.00 0.00 4.30
314 315 5.127491 CGCCTACAAACTTAATAATGGGGA 58.873 41.667 0.00 0.00 0.00 4.81
315 316 4.885325 ACGCCTACAAACTTAATAATGGGG 59.115 41.667 0.00 0.00 0.00 4.96
316 317 5.587043 TCACGCCTACAAACTTAATAATGGG 59.413 40.000 0.00 0.00 0.00 4.00
317 318 6.315393 ACTCACGCCTACAAACTTAATAATGG 59.685 38.462 0.00 0.00 0.00 3.16
318 319 7.064134 TCACTCACGCCTACAAACTTAATAATG 59.936 37.037 0.00 0.00 0.00 1.90
319 320 7.101054 TCACTCACGCCTACAAACTTAATAAT 58.899 34.615 0.00 0.00 0.00 1.28
320 321 6.457355 TCACTCACGCCTACAAACTTAATAA 58.543 36.000 0.00 0.00 0.00 1.40
321 322 6.028146 TCACTCACGCCTACAAACTTAATA 57.972 37.500 0.00 0.00 0.00 0.98
322 323 4.890088 TCACTCACGCCTACAAACTTAAT 58.110 39.130 0.00 0.00 0.00 1.40
323 324 4.325028 TCACTCACGCCTACAAACTTAA 57.675 40.909 0.00 0.00 0.00 1.85
324 325 4.242475 CATCACTCACGCCTACAAACTTA 58.758 43.478 0.00 0.00 0.00 2.24
325 326 2.902705 TCACTCACGCCTACAAACTT 57.097 45.000 0.00 0.00 0.00 2.66
326 327 2.612972 CCATCACTCACGCCTACAAACT 60.613 50.000 0.00 0.00 0.00 2.66
327 328 1.732259 CCATCACTCACGCCTACAAAC 59.268 52.381 0.00 0.00 0.00 2.93
328 329 1.346395 ACCATCACTCACGCCTACAAA 59.654 47.619 0.00 0.00 0.00 2.83
329 330 0.973632 ACCATCACTCACGCCTACAA 59.026 50.000 0.00 0.00 0.00 2.41
330 331 0.973632 AACCATCACTCACGCCTACA 59.026 50.000 0.00 0.00 0.00 2.74
331 332 2.000447 GAAACCATCACTCACGCCTAC 59.000 52.381 0.00 0.00 0.00 3.18
332 333 1.403647 CGAAACCATCACTCACGCCTA 60.404 52.381 0.00 0.00 0.00 3.93
333 334 0.670546 CGAAACCATCACTCACGCCT 60.671 55.000 0.00 0.00 0.00 5.52
334 335 1.635663 CCGAAACCATCACTCACGCC 61.636 60.000 0.00 0.00 0.00 5.68
335 336 1.635663 CCCGAAACCATCACTCACGC 61.636 60.000 0.00 0.00 0.00 5.34
336 337 0.320421 ACCCGAAACCATCACTCACG 60.320 55.000 0.00 0.00 0.00 4.35
337 338 1.156736 CACCCGAAACCATCACTCAC 58.843 55.000 0.00 0.00 0.00 3.51
338 339 0.036164 CCACCCGAAACCATCACTCA 59.964 55.000 0.00 0.00 0.00 3.41
339 340 0.323629 TCCACCCGAAACCATCACTC 59.676 55.000 0.00 0.00 0.00 3.51
340 341 0.991920 ATCCACCCGAAACCATCACT 59.008 50.000 0.00 0.00 0.00 3.41
341 342 1.472480 CAATCCACCCGAAACCATCAC 59.528 52.381 0.00 0.00 0.00 3.06
342 343 1.352687 TCAATCCACCCGAAACCATCA 59.647 47.619 0.00 0.00 0.00 3.07
343 344 2.122783 TCAATCCACCCGAAACCATC 57.877 50.000 0.00 0.00 0.00 3.51
344 345 2.291540 ACATCAATCCACCCGAAACCAT 60.292 45.455 0.00 0.00 0.00 3.55
345 346 1.074727 ACATCAATCCACCCGAAACCA 59.925 47.619 0.00 0.00 0.00 3.67
346 347 1.834188 ACATCAATCCACCCGAAACC 58.166 50.000 0.00 0.00 0.00 3.27
347 348 3.945285 ACATACATCAATCCACCCGAAAC 59.055 43.478 0.00 0.00 0.00 2.78
348 349 4.229304 ACATACATCAATCCACCCGAAA 57.771 40.909 0.00 0.00 0.00 3.46
349 350 3.924114 ACATACATCAATCCACCCGAA 57.076 42.857 0.00 0.00 0.00 4.30
350 351 3.454447 AGAACATACATCAATCCACCCGA 59.546 43.478 0.00 0.00 0.00 5.14
351 352 3.808728 AGAACATACATCAATCCACCCG 58.191 45.455 0.00 0.00 0.00 5.28
352 353 4.949856 ACAAGAACATACATCAATCCACCC 59.050 41.667 0.00 0.00 0.00 4.61
353 354 5.647658 TGACAAGAACATACATCAATCCACC 59.352 40.000 0.00 0.00 0.00 4.61
354 355 6.595326 TCTGACAAGAACATACATCAATCCAC 59.405 38.462 0.00 0.00 0.00 4.02
355 356 6.595326 GTCTGACAAGAACATACATCAATCCA 59.405 38.462 2.24 0.00 33.05 3.41
356 357 6.237942 CGTCTGACAAGAACATACATCAATCC 60.238 42.308 8.73 0.00 33.05 3.01
357 358 6.311445 ACGTCTGACAAGAACATACATCAATC 59.689 38.462 8.73 0.00 33.05 2.67
358 359 6.166279 ACGTCTGACAAGAACATACATCAAT 58.834 36.000 8.73 0.00 33.05 2.57
359 360 5.538118 ACGTCTGACAAGAACATACATCAA 58.462 37.500 8.73 0.00 33.05 2.57
360 361 5.134202 ACGTCTGACAAGAACATACATCA 57.866 39.130 8.73 0.00 33.05 3.07
361 362 6.073765 ACAAACGTCTGACAAGAACATACATC 60.074 38.462 8.73 0.00 33.05 3.06
362 363 5.758296 ACAAACGTCTGACAAGAACATACAT 59.242 36.000 8.73 0.00 33.05 2.29
363 364 5.006261 CACAAACGTCTGACAAGAACATACA 59.994 40.000 8.73 0.00 33.05 2.29
364 365 5.432157 CACAAACGTCTGACAAGAACATAC 58.568 41.667 8.73 0.00 33.05 2.39
365 366 4.025229 GCACAAACGTCTGACAAGAACATA 60.025 41.667 8.73 0.00 33.05 2.29
366 367 3.242739 GCACAAACGTCTGACAAGAACAT 60.243 43.478 8.73 0.00 33.05 2.71
367 368 2.095213 GCACAAACGTCTGACAAGAACA 59.905 45.455 8.73 0.00 33.05 3.18
368 369 2.095213 TGCACAAACGTCTGACAAGAAC 59.905 45.455 8.73 0.00 33.05 3.01
369 370 2.351455 TGCACAAACGTCTGACAAGAA 58.649 42.857 8.73 0.00 33.05 2.52
370 371 2.017138 TGCACAAACGTCTGACAAGA 57.983 45.000 8.73 0.00 0.00 3.02
371 372 2.823196 TTGCACAAACGTCTGACAAG 57.177 45.000 8.73 0.00 0.00 3.16
372 373 4.884458 TTATTGCACAAACGTCTGACAA 57.116 36.364 8.73 0.00 0.00 3.18
373 374 5.431420 AATTATTGCACAAACGTCTGACA 57.569 34.783 8.73 0.00 0.00 3.58
374 375 9.549509 TTATTAATTATTGCACAAACGTCTGAC 57.450 29.630 0.00 0.00 0.00 3.51
383 384 9.531942 CAGCCATCTTTATTAATTATTGCACAA 57.468 29.630 0.00 0.00 0.00 3.33
384 385 7.652909 GCAGCCATCTTTATTAATTATTGCACA 59.347 33.333 0.00 0.00 0.00 4.57
385 386 7.652909 TGCAGCCATCTTTATTAATTATTGCAC 59.347 33.333 0.00 0.00 31.25 4.57
386 387 7.724287 TGCAGCCATCTTTATTAATTATTGCA 58.276 30.769 0.00 0.00 33.49 4.08
387 388 8.653338 CATGCAGCCATCTTTATTAATTATTGC 58.347 33.333 0.00 0.00 0.00 3.56
388 389 8.653338 GCATGCAGCCATCTTTATTAATTATTG 58.347 33.333 14.21 0.00 37.23 1.90
389 390 8.369424 TGCATGCAGCCATCTTTATTAATTATT 58.631 29.630 18.46 0.00 44.83 1.40
390 391 7.898918 TGCATGCAGCCATCTTTATTAATTAT 58.101 30.769 18.46 0.00 44.83 1.28
391 392 7.287512 TGCATGCAGCCATCTTTATTAATTA 57.712 32.000 18.46 0.00 44.83 1.40
392 393 6.164417 TGCATGCAGCCATCTTTATTAATT 57.836 33.333 18.46 0.00 44.83 1.40
393 394 5.794726 TGCATGCAGCCATCTTTATTAAT 57.205 34.783 18.46 0.00 44.83 1.40
394 395 5.563280 CGATGCATGCAGCCATCTTTATTAA 60.563 40.000 28.76 0.00 44.83 1.40
395 396 4.083164 CGATGCATGCAGCCATCTTTATTA 60.083 41.667 28.76 0.00 44.83 0.98
396 397 3.305131 CGATGCATGCAGCCATCTTTATT 60.305 43.478 28.76 6.01 44.83 1.40
397 398 2.228103 CGATGCATGCAGCCATCTTTAT 59.772 45.455 28.76 6.59 44.83 1.40
398 399 1.605232 CGATGCATGCAGCCATCTTTA 59.395 47.619 28.76 0.00 44.83 1.85
399 400 0.384309 CGATGCATGCAGCCATCTTT 59.616 50.000 28.76 8.20 44.83 2.52
400 401 0.464916 TCGATGCATGCAGCCATCTT 60.465 50.000 28.76 9.02 44.83 2.40
401 402 0.250770 ATCGATGCATGCAGCCATCT 60.251 50.000 28.76 9.83 44.83 2.90
402 403 0.596577 AATCGATGCATGCAGCCATC 59.403 50.000 28.76 18.37 44.83 3.51
403 404 0.313987 CAATCGATGCATGCAGCCAT 59.686 50.000 28.76 20.10 44.83 4.40
404 405 0.748729 TCAATCGATGCATGCAGCCA 60.749 50.000 28.76 18.55 44.83 4.75
405 406 0.596577 ATCAATCGATGCATGCAGCC 59.403 50.000 28.76 19.54 44.83 4.85
406 407 1.686464 CATCAATCGATGCATGCAGC 58.314 50.000 25.69 25.69 42.54 5.25
423 424 4.872760 GGTTAAACCCCTGCCTCTGCAT 62.873 54.545 0.00 0.00 38.57 3.96
424 425 3.621015 GGTTAAACCCCTGCCTCTGCA 62.621 57.143 0.00 0.00 37.46 4.41
425 426 0.965866 GGTTAAACCCCTGCCTCTGC 60.966 60.000 0.00 0.00 32.42 4.26
426 427 0.698818 AGGTTAAACCCCTGCCTCTG 59.301 55.000 0.00 0.00 39.75 3.35
427 428 0.992695 GAGGTTAAACCCCTGCCTCT 59.007 55.000 0.00 0.00 39.75 3.69
428 429 0.034380 GGAGGTTAAACCCCTGCCTC 60.034 60.000 0.00 0.00 39.75 4.70
429 430 0.477795 AGGAGGTTAAACCCCTGCCT 60.478 55.000 0.00 0.00 41.03 4.75
430 431 0.408309 AAGGAGGTTAAACCCCTGCC 59.592 55.000 0.00 0.00 41.03 4.85
431 432 2.304221 AAAGGAGGTTAAACCCCTGC 57.696 50.000 0.00 0.00 39.75 4.85
432 433 6.734502 TTTAAAAAGGAGGTTAAACCCCTG 57.265 37.500 0.00 0.00 39.75 4.45
433 434 7.752518 TTTTTAAAAAGGAGGTTAAACCCCT 57.247 32.000 9.31 0.00 39.75 4.79
456 457 8.474831 GGGTAATATCATTGCTTACCAGTTTTT 58.525 33.333 17.17 0.00 44.02 1.94
457 458 7.069455 GGGGTAATATCATTGCTTACCAGTTTT 59.931 37.037 17.17 0.00 44.02 2.43
458 459 6.549736 GGGGTAATATCATTGCTTACCAGTTT 59.450 38.462 17.17 0.00 44.02 2.66
459 460 6.068670 GGGGTAATATCATTGCTTACCAGTT 58.931 40.000 17.17 0.00 44.02 3.16
460 461 5.133660 TGGGGTAATATCATTGCTTACCAGT 59.866 40.000 17.17 0.00 44.02 4.00
461 462 5.630121 TGGGGTAATATCATTGCTTACCAG 58.370 41.667 17.17 0.00 44.02 4.00
462 463 5.133660 ACTGGGGTAATATCATTGCTTACCA 59.866 40.000 17.17 0.00 44.02 3.25
463 464 5.473504 CACTGGGGTAATATCATTGCTTACC 59.526 44.000 11.29 11.29 42.34 2.85
486 487 3.706183 TCCATTATTTCACCACATGCCA 58.294 40.909 0.00 0.00 0.00 4.92
487 488 4.734398 TTCCATTATTTCACCACATGCC 57.266 40.909 0.00 0.00 0.00 4.40
488 489 7.981225 ACTAAATTCCATTATTTCACCACATGC 59.019 33.333 0.00 0.00 0.00 4.06
583 584 2.670509 GCCTCTTGCTTGTTTGATCTGC 60.671 50.000 0.00 0.00 36.87 4.26
618 619 0.869730 CAAATTGGCCAACTTGCAGC 59.130 50.000 25.15 0.00 0.00 5.25
858 861 8.396390 CGTATATATAATAGACACGAGCCAAGT 58.604 37.037 0.00 0.00 0.00 3.16
859 862 7.376336 GCGTATATATAATAGACACGAGCCAAG 59.624 40.741 6.21 0.00 0.00 3.61
861 864 6.238566 GGCGTATATATAATAGACACGAGCCA 60.239 42.308 6.21 0.00 37.45 4.75
862 865 6.017275 AGGCGTATATATAATAGACACGAGCC 60.017 42.308 6.21 0.66 37.74 4.70
863 866 6.957150 AGGCGTATATATAATAGACACGAGC 58.043 40.000 6.21 0.00 0.00 5.03
864 867 8.367943 AGAGGCGTATATATAATAGACACGAG 57.632 38.462 6.21 0.00 0.00 4.18
865 868 9.254133 GTAGAGGCGTATATATAATAGACACGA 57.746 37.037 6.21 0.00 0.00 4.35
866 869 8.494347 GGTAGAGGCGTATATATAATAGACACG 58.506 40.741 0.00 0.00 0.00 4.49
867 870 8.782144 GGGTAGAGGCGTATATATAATAGACAC 58.218 40.741 0.00 0.00 0.00 3.67
1016 1025 3.731728 GGATGCTGGGGCTGGACA 61.732 66.667 0.00 0.00 39.59 4.02
1765 1787 2.354821 GTGACGAAAAGAACCAGCAACT 59.645 45.455 0.00 0.00 0.00 3.16
1766 1788 2.096819 TGTGACGAAAAGAACCAGCAAC 59.903 45.455 0.00 0.00 0.00 4.17
1767 1789 2.360844 TGTGACGAAAAGAACCAGCAA 58.639 42.857 0.00 0.00 0.00 3.91
1769 1791 3.626028 AATGTGACGAAAAGAACCAGC 57.374 42.857 0.00 0.00 0.00 4.85
1770 1792 4.970003 GTCAAATGTGACGAAAAGAACCAG 59.030 41.667 0.00 0.00 44.58 4.00
1796 1818 6.346199 CGAGAAAAGAAGAAGAAGAAACGAGG 60.346 42.308 0.00 0.00 0.00 4.63
1799 1821 6.275305 ACGAGAAAAGAAGAAGAAGAAACG 57.725 37.500 0.00 0.00 0.00 3.60
1805 1827 6.370442 TCACAACAACGAGAAAAGAAGAAGAA 59.630 34.615 0.00 0.00 0.00 2.52
1844 1870 3.593328 TGAATCTTTGGACAAGGGAGGAT 59.407 43.478 0.00 0.00 0.00 3.24
1980 2006 5.070001 GGGGTCGAAATCAATGAATATCCA 58.930 41.667 0.00 0.00 0.00 3.41
1985 2011 4.158394 CACAAGGGGTCGAAATCAATGAAT 59.842 41.667 0.00 0.00 0.00 2.57
1992 2018 0.521735 GCACACAAGGGGTCGAAATC 59.478 55.000 0.00 0.00 0.00 2.17
1997 2023 1.525995 AACAGCACACAAGGGGTCG 60.526 57.895 0.00 0.00 0.00 4.79
1998 2024 0.465460 TCAACAGCACACAAGGGGTC 60.465 55.000 0.00 0.00 0.00 4.46
1999 2025 0.466189 CTCAACAGCACACAAGGGGT 60.466 55.000 0.00 0.00 0.00 4.95
2000 2026 1.799258 GCTCAACAGCACACAAGGGG 61.799 60.000 0.00 0.00 46.06 4.79
2001 2027 1.656441 GCTCAACAGCACACAAGGG 59.344 57.895 0.00 0.00 46.06 3.95
2011 2047 6.314648 TGTTCTTGATTAGCTATGCTCAACAG 59.685 38.462 0.00 0.00 40.44 3.16
2057 2097 2.029838 AACAAGCTCGATCCACCATC 57.970 50.000 0.00 0.00 0.00 3.51
2086 2126 1.065928 GTGCTAGCTACCGATGCGT 59.934 57.895 17.23 0.00 35.28 5.24
2087 2127 0.527600 TTGTGCTAGCTACCGATGCG 60.528 55.000 17.23 0.00 35.28 4.73
2099 2139 9.638239 GAAAATTCACCATTATTTCTTGTGCTA 57.362 29.630 0.00 0.00 0.00 3.49
2161 2206 5.233957 TGCAATAAATTGGTCATCTGACG 57.766 39.130 4.93 0.00 45.65 4.35
2200 2245 9.676129 TCTTATATTTCTTTCCTGAGGGAGTAT 57.324 33.333 0.00 0.00 43.29 2.12
2201 2246 9.502035 TTCTTATATTTCTTTCCTGAGGGAGTA 57.498 33.333 0.00 0.00 43.29 2.59
2202 2247 7.996758 TCTTATATTTCTTTCCTGAGGGAGT 57.003 36.000 0.00 0.00 43.29 3.85
2203 2248 9.282569 CATTCTTATATTTCTTTCCTGAGGGAG 57.717 37.037 0.00 0.00 43.29 4.30
2204 2249 8.781951 ACATTCTTATATTTCTTTCCTGAGGGA 58.218 33.333 0.00 0.00 40.36 4.20
2205 2250 8.986929 ACATTCTTATATTTCTTTCCTGAGGG 57.013 34.615 0.00 0.00 0.00 4.30
2236 2281 9.595823 CCGGAAAGAAATATAAGAGTGTTTAGA 57.404 33.333 0.00 0.00 0.00 2.10
2237 2282 9.595823 TCCGGAAAGAAATATAAGAGTGTTTAG 57.404 33.333 0.00 0.00 0.00 1.85
2238 2283 9.595823 CTCCGGAAAGAAATATAAGAGTGTTTA 57.404 33.333 5.23 0.00 0.00 2.01
2239 2284 7.553044 CCTCCGGAAAGAAATATAAGAGTGTTT 59.447 37.037 5.23 0.00 0.00 2.83
2240 2285 7.048512 CCTCCGGAAAGAAATATAAGAGTGTT 58.951 38.462 5.23 0.00 0.00 3.32
2241 2286 6.408206 CCCTCCGGAAAGAAATATAAGAGTGT 60.408 42.308 5.23 0.00 0.00 3.55
2242 2287 5.992217 CCCTCCGGAAAGAAATATAAGAGTG 59.008 44.000 5.23 0.00 0.00 3.51
2243 2288 5.903589 TCCCTCCGGAAAGAAATATAAGAGT 59.096 40.000 5.23 0.00 34.19 3.24
2244 2289 6.042208 ACTCCCTCCGGAAAGAAATATAAGAG 59.958 42.308 5.23 2.37 37.86 2.85
2245 2290 5.903589 ACTCCCTCCGGAAAGAAATATAAGA 59.096 40.000 5.23 0.00 37.86 2.10
2246 2291 6.176014 ACTCCCTCCGGAAAGAAATATAAG 57.824 41.667 5.23 0.00 37.86 1.73
2247 2292 6.842807 AGTACTCCCTCCGGAAAGAAATATAA 59.157 38.462 5.23 0.00 37.86 0.98
2248 2293 6.379579 AGTACTCCCTCCGGAAAGAAATATA 58.620 40.000 5.23 0.00 37.86 0.86
2249 2294 5.217400 AGTACTCCCTCCGGAAAGAAATAT 58.783 41.667 5.23 0.00 37.86 1.28
2250 2295 4.617593 AGTACTCCCTCCGGAAAGAAATA 58.382 43.478 5.23 0.00 37.86 1.40
2251 2296 3.451890 AGTACTCCCTCCGGAAAGAAAT 58.548 45.455 5.23 0.00 37.86 2.17
2252 2297 2.898662 AGTACTCCCTCCGGAAAGAAA 58.101 47.619 5.23 0.00 37.86 2.52
2253 2298 2.617840 AGTACTCCCTCCGGAAAGAA 57.382 50.000 5.23 0.00 37.86 2.52
2254 2299 2.617840 AAGTACTCCCTCCGGAAAGA 57.382 50.000 5.23 4.03 37.86 2.52
2255 2300 7.173722 TCTATATAAGTACTCCCTCCGGAAAG 58.826 42.308 5.23 6.10 37.86 2.62
2256 2301 7.095183 TCTATATAAGTACTCCCTCCGGAAA 57.905 40.000 5.23 0.00 37.86 3.13
2257 2302 6.708885 TCTATATAAGTACTCCCTCCGGAA 57.291 41.667 5.23 0.00 37.86 4.30
2258 2303 6.708885 TTCTATATAAGTACTCCCTCCGGA 57.291 41.667 2.93 2.93 36.45 5.14
2259 2304 7.835181 AGATTTCTATATAAGTACTCCCTCCGG 59.165 40.741 0.00 0.00 0.00 5.14
2260 2305 8.810990 AGATTTCTATATAAGTACTCCCTCCG 57.189 38.462 0.00 0.00 0.00 4.63
2309 2354 0.537653 TATCGGTCGATTGGTTGGCA 59.462 50.000 11.20 0.00 36.17 4.92
2355 2400 2.064628 AGCATCTGCCGGCTCATAT 58.935 52.632 29.70 12.58 43.38 1.78
2356 2401 3.554716 AGCATCTGCCGGCTCATA 58.445 55.556 29.70 10.62 43.38 2.15
2360 2420 2.563013 ATTTGGAGCATCTGCCGGCT 62.563 55.000 29.70 5.42 44.48 5.52
2401 2470 4.926238 CGTAGGAGAGATTATGGTTCATGC 59.074 45.833 0.00 0.00 0.00 4.06
2412 2483 7.861372 CGTTTATACATTGTCGTAGGAGAGATT 59.139 37.037 0.00 0.00 0.00 2.40
2438 2509 6.315091 ACATTTGCTCTATTCTGCATCATC 57.685 37.500 0.00 0.00 39.07 2.92
2445 2516 8.843262 TGGATTCATAACATTTGCTCTATTCTG 58.157 33.333 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.