Multiple sequence alignment - TraesCS4B01G155100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G155100 chr4B 100.000 2825 0 0 1 2825 276360075 276362899 0.000000e+00 5217.0
1 TraesCS4B01G155100 chr4A 90.660 1895 119 29 377 2245 307087633 307089495 0.000000e+00 2466.0
2 TraesCS4B01G155100 chr4A 87.668 373 43 3 1 371 307086878 307087249 5.590000e-117 431.0
3 TraesCS4B01G155100 chr4D 94.759 1164 42 10 924 2086 272995535 272994390 0.000000e+00 1794.0
4 TraesCS4B01G155100 chr4D 93.220 413 16 6 496 905 272995925 272995522 5.210000e-167 597.0
5 TraesCS4B01G155100 chr4D 92.013 313 24 1 1 312 272996248 272995936 3.340000e-119 438.0
6 TraesCS4B01G155100 chr4D 87.619 210 20 5 2317 2523 496205154 496204948 3.640000e-59 239.0
7 TraesCS4B01G155100 chr4D 86.603 209 25 3 2318 2523 390023298 390023506 7.870000e-56 228.0
8 TraesCS4B01G155100 chr5A 87.938 257 23 6 2273 2523 280675155 280675409 2.130000e-76 296.0
9 TraesCS4B01G155100 chr5D 83.489 321 33 12 2523 2825 556612011 556611693 5.960000e-72 281.0
10 TraesCS4B01G155100 chr5D 80.126 317 39 10 2527 2825 223548841 223549151 6.130000e-52 215.0
11 TraesCS4B01G155100 chr7A 85.156 256 30 5 2273 2523 709025678 709025426 3.610000e-64 255.0
12 TraesCS4B01G155100 chr7D 84.979 233 30 3 2295 2523 616098094 616097863 6.090000e-57 231.0
13 TraesCS4B01G155100 chr5B 86.022 186 19 7 2271 2451 588811062 588810879 2.870000e-45 193.0
14 TraesCS4B01G155100 chr3D 96.875 32 1 0 371 402 608407907 608407938 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G155100 chr4B 276360075 276362899 2824 False 5217.0 5217 100.000000 1 2825 1 chr4B.!!$F1 2824
1 TraesCS4B01G155100 chr4A 307086878 307089495 2617 False 1448.5 2466 89.164000 1 2245 2 chr4A.!!$F1 2244
2 TraesCS4B01G155100 chr4D 272994390 272996248 1858 True 943.0 1794 93.330667 1 2086 3 chr4D.!!$R2 2085

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.106708 GATCATGCCGGCTCTGGTAA 59.893 55.000 29.7 5.17 0.0 2.85 F
273 275 0.512085 AAAATTTGCCATGCGTTGCG 59.488 45.000 0.0 0.00 0.0 4.85 F
451 837 1.134175 GGCATTGGTTATTCGGTGGTG 59.866 52.381 0.0 0.00 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1195 1608 0.025898 TCGTCGTCGTCGTCATCATC 59.974 55.0 11.41 0.0 38.33 2.92 R
1218 1631 0.247537 CGTCGTCGTCGTCATCATCA 60.248 55.0 3.67 0.0 38.33 3.07 R
2327 2747 0.326238 TAGGTGATGGGAGTGGGGAC 60.326 60.0 0.00 0.0 0.00 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 3.285484 GGGCTGTCATTGTCAAGATCAT 58.715 45.455 0.00 0.00 0.00 2.45
84 85 0.106708 GATCATGCCGGCTCTGGTAA 59.893 55.000 29.70 5.17 0.00 2.85
86 87 1.221840 CATGCCGGCTCTGGTAAGT 59.778 57.895 29.70 0.00 0.00 2.24
123 124 1.134699 TGTCGATGACTCATTCTGGCC 60.135 52.381 0.00 0.00 33.15 5.36
240 242 1.475280 CTACTAGGTAAGTGCCGTGCA 59.525 52.381 0.00 0.00 39.39 4.57
251 253 1.035923 TGCCGTGCATTTTCCTCAAA 58.964 45.000 0.00 0.00 31.71 2.69
252 254 1.410517 TGCCGTGCATTTTCCTCAAAA 59.589 42.857 0.00 0.00 35.92 2.44
253 255 2.159043 TGCCGTGCATTTTCCTCAAAAA 60.159 40.909 0.00 0.00 40.98 1.94
273 275 0.512085 AAAATTTGCCATGCGTTGCG 59.488 45.000 0.00 0.00 0.00 4.85
315 317 9.653287 TTTTAATAGATTGACCAGTGACTACAG 57.347 33.333 0.00 0.00 0.00 2.74
356 358 9.067986 AGTGCACTAAAATCTTAGCTAGTTTTT 57.932 29.630 20.16 13.41 38.52 1.94
371 373 6.756542 AGCTAGTTTTTGTTTCCAATGAACAC 59.243 34.615 0.00 0.00 36.79 3.32
372 374 6.533367 GCTAGTTTTTGTTTCCAATGAACACA 59.467 34.615 0.00 0.00 36.79 3.72
374 376 7.127917 AGTTTTTGTTTCCAATGAACACAAC 57.872 32.000 0.00 0.00 36.79 3.32
375 377 5.769967 TTTTGTTTCCAATGAACACAACG 57.230 34.783 0.00 0.00 36.79 4.10
376 378 4.703645 TTGTTTCCAATGAACACAACGA 57.296 36.364 0.00 0.00 36.79 3.85
377 379 4.022464 TGTTTCCAATGAACACAACGAC 57.978 40.909 0.00 0.00 32.44 4.34
378 380 3.440522 TGTTTCCAATGAACACAACGACA 59.559 39.130 0.00 0.00 32.44 4.35
391 771 5.757886 ACACAACGACACTTATTTTGGATG 58.242 37.500 0.00 0.00 0.00 3.51
394 774 5.995282 ACAACGACACTTATTTTGGATGAGA 59.005 36.000 0.00 0.00 0.00 3.27
398 778 5.626809 CGACACTTATTTTGGATGAGAGGGA 60.627 44.000 0.00 0.00 0.00 4.20
451 837 1.134175 GGCATTGGTTATTCGGTGGTG 59.866 52.381 0.00 0.00 0.00 4.17
456 847 3.048337 TGGTTATTCGGTGGTGAACTC 57.952 47.619 0.00 0.00 0.00 3.01
457 848 2.369203 TGGTTATTCGGTGGTGAACTCA 59.631 45.455 0.00 0.00 0.00 3.41
469 860 6.612306 GGTGGTGAACTCAATGTAATCTTTC 58.388 40.000 0.00 0.00 0.00 2.62
471 862 6.206634 GTGGTGAACTCAATGTAATCTTTCCA 59.793 38.462 0.00 0.00 0.00 3.53
472 863 6.775142 TGGTGAACTCAATGTAATCTTTCCAA 59.225 34.615 0.00 0.00 0.00 3.53
473 864 7.451255 TGGTGAACTCAATGTAATCTTTCCAAT 59.549 33.333 0.00 0.00 0.00 3.16
504 895 3.575965 CATTGGGTGCTTTGTACTTCC 57.424 47.619 0.00 0.00 0.00 3.46
510 901 3.270877 GGTGCTTTGTACTTCCGATGAT 58.729 45.455 0.00 0.00 0.00 2.45
565 959 4.002906 TCATTCTGTCGTTTAACCAGCT 57.997 40.909 0.00 0.00 0.00 4.24
583 977 4.528206 CCAGCTGGGGTAAAAAGAAGAAAT 59.472 41.667 26.14 0.00 0.00 2.17
608 1002 9.938280 ATACAATGTAACACAGCTTAAGAAGTA 57.062 29.630 6.67 0.00 0.00 2.24
611 1005 7.653767 ATGTAACACAGCTTAAGAAGTACAC 57.346 36.000 6.67 3.38 0.00 2.90
711 1105 3.087031 CAAATTGTCACTGGCCTCTCAT 58.913 45.455 3.32 0.00 0.00 2.90
891 1290 7.425003 ACCCCAACTACTTAATAACCTCTCTA 58.575 38.462 0.00 0.00 0.00 2.43
892 1291 7.902941 ACCCCAACTACTTAATAACCTCTCTAA 59.097 37.037 0.00 0.00 0.00 2.10
893 1292 8.935741 CCCCAACTACTTAATAACCTCTCTAAT 58.064 37.037 0.00 0.00 0.00 1.73
906 1305 7.973048 AACCTCTCTAATACACATTACTGGA 57.027 36.000 0.00 0.00 0.00 3.86
907 1306 8.554490 AACCTCTCTAATACACATTACTGGAT 57.446 34.615 0.00 0.00 0.00 3.41
908 1307 8.554490 ACCTCTCTAATACACATTACTGGATT 57.446 34.615 0.00 0.00 0.00 3.01
909 1308 8.993424 ACCTCTCTAATACACATTACTGGATTT 58.007 33.333 0.00 0.00 0.00 2.17
910 1309 9.838339 CCTCTCTAATACACATTACTGGATTTT 57.162 33.333 0.00 0.00 0.00 1.82
937 1336 1.401552 CGGGACAATGCACATTACTGG 59.598 52.381 0.00 0.00 0.00 4.00
1194 1607 1.541310 ATCACCACCACCACGACGAT 61.541 55.000 0.00 0.00 0.00 3.73
1195 1608 2.027073 CACCACCACCACGACGATG 61.027 63.158 0.00 0.00 0.00 3.84
1196 1609 2.204461 ACCACCACCACGACGATGA 61.204 57.895 0.00 0.00 0.00 2.92
1224 1637 0.656259 ACGACGACGACGATGATGAT 59.344 50.000 25.15 0.00 42.66 2.45
1338 1754 1.892338 CCTGATGGCGGCAAACAAT 59.108 52.632 18.31 0.00 0.00 2.71
1346 1762 0.597118 GCGGCAAACAATGACAGCAA 60.597 50.000 0.00 0.00 36.57 3.91
1386 1802 4.344865 GGCACCGGTCACCATGGT 62.345 66.667 13.00 13.00 36.10 3.55
1451 1867 0.594602 CGTCTTCGTGGTACTGGACA 59.405 55.000 0.00 0.00 0.00 4.02
1530 1946 2.732619 GGAGGACCCCGACCATGAC 61.733 68.421 0.00 0.00 0.00 3.06
1533 1949 2.183555 GACCCCGACCATGACGAC 59.816 66.667 12.39 0.00 0.00 4.34
1581 1997 0.242825 ACGACCATGACGACGAACAT 59.757 50.000 16.44 4.14 34.70 2.71
1584 2003 1.654105 GACCATGACGACGAACATGAC 59.346 52.381 27.10 20.08 44.28 3.06
1587 2006 1.317611 CATGACGACGAACATGACGAC 59.682 52.381 23.81 13.82 44.28 4.34
1593 2012 0.723790 ACGAACATGACGACGACGAC 60.724 55.000 15.32 8.68 42.66 4.34
1752 2171 4.124351 CTGCCGCCGTTCCTCGTA 62.124 66.667 0.00 0.00 37.94 3.43
1782 2201 1.286880 CAAGTACGTCGTCCGGGTT 59.713 57.895 0.00 0.00 42.24 4.11
1948 2367 1.227556 GGTAGGCAGCACGTATGGG 60.228 63.158 0.00 0.00 0.00 4.00
1959 2378 0.532115 ACGTATGGGTCGGGTGTAAC 59.468 55.000 0.00 0.00 0.00 2.50
1994 2414 8.842358 AGTATTGTCCTCAAAGTTTTTCGATA 57.158 30.769 0.00 0.00 37.11 2.92
2097 2517 4.629634 TCTGTATTGTTTCTACACGCATGG 59.370 41.667 0.00 0.00 32.98 3.66
2127 2547 2.945008 TGACGAATCATTGATCAAGGGC 59.055 45.455 19.21 8.88 0.00 5.19
2132 2552 4.690122 GAATCATTGATCAAGGGCCAAAG 58.310 43.478 19.21 0.00 0.00 2.77
2173 2593 7.932120 TTAGAACAAAGAGAGAAGAGAAACG 57.068 36.000 0.00 0.00 0.00 3.60
2227 2647 3.839490 AGGAATGCATGGAAACCAATGAA 59.161 39.130 0.00 0.00 36.95 2.57
2236 2656 6.543831 GCATGGAAACCAATGAACTCTACTAT 59.456 38.462 0.00 0.00 36.95 2.12
2277 2697 3.593442 TGGAACAGTTGGATCAGGTTT 57.407 42.857 0.00 0.00 0.00 3.27
2278 2698 3.909732 TGGAACAGTTGGATCAGGTTTT 58.090 40.909 0.00 0.00 0.00 2.43
2279 2699 4.285863 TGGAACAGTTGGATCAGGTTTTT 58.714 39.130 0.00 0.00 0.00 1.94
2299 2719 4.993029 TTTTTCATTCCACCACTTTCGT 57.007 36.364 0.00 0.00 0.00 3.85
2300 2720 4.561735 TTTTCATTCCACCACTTTCGTC 57.438 40.909 0.00 0.00 0.00 4.20
2301 2721 2.178912 TCATTCCACCACTTTCGTCC 57.821 50.000 0.00 0.00 0.00 4.79
2302 2722 0.796312 CATTCCACCACTTTCGTCCG 59.204 55.000 0.00 0.00 0.00 4.79
2303 2723 0.321298 ATTCCACCACTTTCGTCCGG 60.321 55.000 0.00 0.00 0.00 5.14
2304 2724 1.688269 TTCCACCACTTTCGTCCGGT 61.688 55.000 0.00 0.00 0.00 5.28
2305 2725 1.227734 CCACCACTTTCGTCCGGTT 60.228 57.895 0.00 0.00 0.00 4.44
2306 2726 0.816421 CCACCACTTTCGTCCGGTTT 60.816 55.000 0.00 0.00 0.00 3.27
2307 2727 1.018910 CACCACTTTCGTCCGGTTTT 58.981 50.000 0.00 0.00 0.00 2.43
2308 2728 2.211806 CACCACTTTCGTCCGGTTTTA 58.788 47.619 0.00 0.00 0.00 1.52
2309 2729 2.809696 CACCACTTTCGTCCGGTTTTAT 59.190 45.455 0.00 0.00 0.00 1.40
2310 2730 3.251487 CACCACTTTCGTCCGGTTTTATT 59.749 43.478 0.00 0.00 0.00 1.40
2311 2731 3.884693 ACCACTTTCGTCCGGTTTTATTT 59.115 39.130 0.00 0.00 0.00 1.40
2312 2732 4.338964 ACCACTTTCGTCCGGTTTTATTTT 59.661 37.500 0.00 0.00 0.00 1.82
2313 2733 4.677832 CCACTTTCGTCCGGTTTTATTTTG 59.322 41.667 0.00 0.00 0.00 2.44
2314 2734 5.505985 CCACTTTCGTCCGGTTTTATTTTGA 60.506 40.000 0.00 0.00 0.00 2.69
2315 2735 5.397240 CACTTTCGTCCGGTTTTATTTTGAC 59.603 40.000 0.00 0.00 0.00 3.18
2316 2736 5.297527 ACTTTCGTCCGGTTTTATTTTGACT 59.702 36.000 0.00 0.00 0.00 3.41
2317 2737 4.735662 TCGTCCGGTTTTATTTTGACTG 57.264 40.909 0.00 0.00 0.00 3.51
2318 2738 3.499157 TCGTCCGGTTTTATTTTGACTGG 59.501 43.478 0.00 0.00 40.46 4.00
2319 2739 3.251487 CGTCCGGTTTTATTTTGACTGGT 59.749 43.478 0.00 0.00 40.10 4.00
2320 2740 4.261280 CGTCCGGTTTTATTTTGACTGGTT 60.261 41.667 0.00 0.00 40.10 3.67
2321 2741 5.593968 GTCCGGTTTTATTTTGACTGGTTT 58.406 37.500 0.00 0.00 40.10 3.27
2322 2742 6.513066 CGTCCGGTTTTATTTTGACTGGTTTA 60.513 38.462 0.00 0.00 40.10 2.01
2323 2743 7.372714 GTCCGGTTTTATTTTGACTGGTTTAT 58.627 34.615 0.00 0.00 40.10 1.40
2324 2744 7.868922 GTCCGGTTTTATTTTGACTGGTTTATT 59.131 33.333 0.00 0.00 40.10 1.40
2325 2745 8.422566 TCCGGTTTTATTTTGACTGGTTTATTT 58.577 29.630 0.00 0.00 40.10 1.40
2326 2746 9.047371 CCGGTTTTATTTTGACTGGTTTATTTT 57.953 29.630 0.00 0.00 35.54 1.82
2327 2747 9.856803 CGGTTTTATTTTGACTGGTTTATTTTG 57.143 29.630 0.00 0.00 0.00 2.44
2331 2751 9.549078 TTTATTTTGACTGGTTTATTTTGTCCC 57.451 29.630 0.00 0.00 0.00 4.46
2332 2752 5.538849 TTTGACTGGTTTATTTTGTCCCC 57.461 39.130 0.00 0.00 0.00 4.81
2333 2753 4.186077 TGACTGGTTTATTTTGTCCCCA 57.814 40.909 0.00 0.00 0.00 4.96
2334 2754 3.892588 TGACTGGTTTATTTTGTCCCCAC 59.107 43.478 0.00 0.00 0.00 4.61
2335 2755 4.149598 GACTGGTTTATTTTGTCCCCACT 58.850 43.478 0.00 0.00 0.00 4.00
2336 2756 4.149598 ACTGGTTTATTTTGTCCCCACTC 58.850 43.478 0.00 0.00 0.00 3.51
2337 2757 3.502356 TGGTTTATTTTGTCCCCACTCC 58.498 45.455 0.00 0.00 0.00 3.85
2338 2758 2.829720 GGTTTATTTTGTCCCCACTCCC 59.170 50.000 0.00 0.00 0.00 4.30
2339 2759 3.502356 GTTTATTTTGTCCCCACTCCCA 58.498 45.455 0.00 0.00 0.00 4.37
2340 2760 4.093743 GTTTATTTTGTCCCCACTCCCAT 58.906 43.478 0.00 0.00 0.00 4.00
2341 2761 2.532250 ATTTTGTCCCCACTCCCATC 57.468 50.000 0.00 0.00 0.00 3.51
2342 2762 1.153539 TTTTGTCCCCACTCCCATCA 58.846 50.000 0.00 0.00 0.00 3.07
2343 2763 0.404040 TTTGTCCCCACTCCCATCAC 59.596 55.000 0.00 0.00 0.00 3.06
2344 2764 1.497309 TTGTCCCCACTCCCATCACC 61.497 60.000 0.00 0.00 0.00 4.02
2345 2765 1.616628 GTCCCCACTCCCATCACCT 60.617 63.158 0.00 0.00 0.00 4.00
2346 2766 0.326238 GTCCCCACTCCCATCACCTA 60.326 60.000 0.00 0.00 0.00 3.08
2347 2767 0.326238 TCCCCACTCCCATCACCTAC 60.326 60.000 0.00 0.00 0.00 3.18
2348 2768 0.326618 CCCCACTCCCATCACCTACT 60.327 60.000 0.00 0.00 0.00 2.57
2349 2769 1.123928 CCCACTCCCATCACCTACTC 58.876 60.000 0.00 0.00 0.00 2.59
2350 2770 1.343478 CCCACTCCCATCACCTACTCT 60.343 57.143 0.00 0.00 0.00 3.24
2351 2771 2.035632 CCACTCCCATCACCTACTCTC 58.964 57.143 0.00 0.00 0.00 3.20
2352 2772 2.624293 CCACTCCCATCACCTACTCTCA 60.624 54.545 0.00 0.00 0.00 3.27
2353 2773 2.428890 CACTCCCATCACCTACTCTCAC 59.571 54.545 0.00 0.00 0.00 3.51
2354 2774 2.313342 ACTCCCATCACCTACTCTCACT 59.687 50.000 0.00 0.00 0.00 3.41
2355 2775 2.692557 CTCCCATCACCTACTCTCACTG 59.307 54.545 0.00 0.00 0.00 3.66
2356 2776 1.759445 CCCATCACCTACTCTCACTGG 59.241 57.143 0.00 0.00 0.00 4.00
2357 2777 2.461695 CCATCACCTACTCTCACTGGT 58.538 52.381 0.00 0.00 0.00 4.00
2358 2778 2.834549 CCATCACCTACTCTCACTGGTT 59.165 50.000 0.00 0.00 0.00 3.67
2359 2779 3.261897 CCATCACCTACTCTCACTGGTTT 59.738 47.826 0.00 0.00 0.00 3.27
2360 2780 4.466370 CCATCACCTACTCTCACTGGTTTA 59.534 45.833 0.00 0.00 0.00 2.01
2361 2781 5.129485 CCATCACCTACTCTCACTGGTTTAT 59.871 44.000 0.00 0.00 0.00 1.40
2362 2782 6.352222 CCATCACCTACTCTCACTGGTTTATT 60.352 42.308 0.00 0.00 0.00 1.40
2363 2783 6.282199 TCACCTACTCTCACTGGTTTATTC 57.718 41.667 0.00 0.00 0.00 1.75
2364 2784 6.017192 TCACCTACTCTCACTGGTTTATTCT 58.983 40.000 0.00 0.00 0.00 2.40
2365 2785 6.153000 TCACCTACTCTCACTGGTTTATTCTC 59.847 42.308 0.00 0.00 0.00 2.87
2366 2786 5.125739 ACCTACTCTCACTGGTTTATTCTCG 59.874 44.000 0.00 0.00 0.00 4.04
2367 2787 3.851098 ACTCTCACTGGTTTATTCTCGC 58.149 45.455 0.00 0.00 0.00 5.03
2368 2788 3.190874 CTCTCACTGGTTTATTCTCGCC 58.809 50.000 0.00 0.00 0.00 5.54
2369 2789 2.832129 TCTCACTGGTTTATTCTCGCCT 59.168 45.455 0.00 0.00 0.00 5.52
2370 2790 3.119101 TCTCACTGGTTTATTCTCGCCTC 60.119 47.826 0.00 0.00 0.00 4.70
2371 2791 2.565391 TCACTGGTTTATTCTCGCCTCA 59.435 45.455 0.00 0.00 0.00 3.86
2372 2792 3.197766 TCACTGGTTTATTCTCGCCTCAT 59.802 43.478 0.00 0.00 0.00 2.90
2373 2793 3.941483 CACTGGTTTATTCTCGCCTCATT 59.059 43.478 0.00 0.00 0.00 2.57
2374 2794 4.396166 CACTGGTTTATTCTCGCCTCATTT 59.604 41.667 0.00 0.00 0.00 2.32
2375 2795 4.636206 ACTGGTTTATTCTCGCCTCATTTC 59.364 41.667 0.00 0.00 0.00 2.17
2376 2796 3.945285 TGGTTTATTCTCGCCTCATTTCC 59.055 43.478 0.00 0.00 0.00 3.13
2377 2797 3.315470 GGTTTATTCTCGCCTCATTTCCC 59.685 47.826 0.00 0.00 0.00 3.97
2378 2798 3.924114 TTATTCTCGCCTCATTTCCCA 57.076 42.857 0.00 0.00 0.00 4.37
2379 2799 4.437682 TTATTCTCGCCTCATTTCCCAT 57.562 40.909 0.00 0.00 0.00 4.00
2380 2800 5.560722 TTATTCTCGCCTCATTTCCCATA 57.439 39.130 0.00 0.00 0.00 2.74
2381 2801 4.647564 ATTCTCGCCTCATTTCCCATAT 57.352 40.909 0.00 0.00 0.00 1.78
2382 2802 3.407424 TCTCGCCTCATTTCCCATATG 57.593 47.619 0.00 0.00 0.00 1.78
2383 2803 2.972021 TCTCGCCTCATTTCCCATATGA 59.028 45.455 3.65 0.00 0.00 2.15
2384 2804 3.390967 TCTCGCCTCATTTCCCATATGAA 59.609 43.478 3.65 0.00 32.02 2.57
2385 2805 4.136796 CTCGCCTCATTTCCCATATGAAA 58.863 43.478 3.65 0.00 38.51 2.69
2386 2806 4.531854 TCGCCTCATTTCCCATATGAAAA 58.468 39.130 3.65 5.07 37.74 2.29
2387 2807 4.952957 TCGCCTCATTTCCCATATGAAAAA 59.047 37.500 3.65 4.71 37.74 1.94
2412 2832 3.762407 TGAACGGATCAGAACTTTCCA 57.238 42.857 0.00 0.00 33.04 3.53
2413 2833 4.286297 TGAACGGATCAGAACTTTCCAT 57.714 40.909 0.00 0.00 33.04 3.41
2414 2834 4.002982 TGAACGGATCAGAACTTTCCATG 58.997 43.478 0.00 0.00 33.04 3.66
2415 2835 2.359900 ACGGATCAGAACTTTCCATGC 58.640 47.619 0.00 0.00 0.00 4.06
2416 2836 1.328680 CGGATCAGAACTTTCCATGCG 59.671 52.381 0.00 0.10 0.00 4.73
2417 2837 2.632377 GGATCAGAACTTTCCATGCGA 58.368 47.619 0.00 0.00 0.00 5.10
2418 2838 2.611292 GGATCAGAACTTTCCATGCGAG 59.389 50.000 0.00 0.00 0.00 5.03
2419 2839 2.099141 TCAGAACTTTCCATGCGAGG 57.901 50.000 0.00 0.00 0.00 4.63
2420 2840 1.089920 CAGAACTTTCCATGCGAGGG 58.910 55.000 0.00 0.00 0.00 4.30
2421 2841 0.678048 AGAACTTTCCATGCGAGGGC 60.678 55.000 0.00 0.00 40.52 5.19
2438 2858 5.629435 GCGAGGGCAAATTATTTAGTAATGC 59.371 40.000 0.00 0.00 39.62 3.56
2439 2859 6.149633 CGAGGGCAAATTATTTAGTAATGCC 58.850 40.000 12.59 12.59 43.27 4.40
2440 2860 6.016276 CGAGGGCAAATTATTTAGTAATGCCT 60.016 38.462 18.01 8.09 43.42 4.75
2441 2861 7.470009 CGAGGGCAAATTATTTAGTAATGCCTT 60.470 37.037 18.01 12.98 43.42 4.35
2442 2862 8.089625 AGGGCAAATTATTTAGTAATGCCTTT 57.910 30.769 18.01 8.10 43.42 3.11
2443 2863 9.207868 AGGGCAAATTATTTAGTAATGCCTTTA 57.792 29.630 18.01 0.00 43.42 1.85
2444 2864 9.996554 GGGCAAATTATTTAGTAATGCCTTTAT 57.003 29.630 18.01 0.00 43.42 1.40
2462 2882 8.344831 TGCCTTTATATGAAAGAATCAATCACG 58.655 33.333 4.04 0.00 42.54 4.35
2463 2883 7.805071 GCCTTTATATGAAAGAATCAATCACGG 59.195 37.037 4.04 0.00 42.54 4.94
2464 2884 8.840321 CCTTTATATGAAAGAATCAATCACGGT 58.160 33.333 4.04 0.00 42.54 4.83
2465 2885 9.869844 CTTTATATGAAAGAATCAATCACGGTC 57.130 33.333 0.00 0.00 42.54 4.79
2466 2886 8.956533 TTATATGAAAGAATCAATCACGGTCA 57.043 30.769 0.00 0.00 42.54 4.02
2467 2887 7.864108 ATATGAAAGAATCAATCACGGTCAA 57.136 32.000 0.00 0.00 42.54 3.18
2468 2888 6.573664 ATGAAAGAATCAATCACGGTCAAA 57.426 33.333 0.00 0.00 42.54 2.69
2469 2889 5.757886 TGAAAGAATCAATCACGGTCAAAC 58.242 37.500 0.00 0.00 34.30 2.93
2470 2890 5.530915 TGAAAGAATCAATCACGGTCAAACT 59.469 36.000 0.00 0.00 34.30 2.66
2471 2891 5.613358 AAGAATCAATCACGGTCAAACTC 57.387 39.130 0.00 0.00 0.00 3.01
2472 2892 4.899502 AGAATCAATCACGGTCAAACTCT 58.100 39.130 0.00 0.00 0.00 3.24
2473 2893 6.037786 AGAATCAATCACGGTCAAACTCTA 57.962 37.500 0.00 0.00 0.00 2.43
2474 2894 6.464222 AGAATCAATCACGGTCAAACTCTAA 58.536 36.000 0.00 0.00 0.00 2.10
2475 2895 6.934645 AGAATCAATCACGGTCAAACTCTAAA 59.065 34.615 0.00 0.00 0.00 1.85
2476 2896 7.444183 AGAATCAATCACGGTCAAACTCTAAAA 59.556 33.333 0.00 0.00 0.00 1.52
2477 2897 6.928979 TCAATCACGGTCAAACTCTAAAAA 57.071 33.333 0.00 0.00 0.00 1.94
2478 2898 7.504924 TCAATCACGGTCAAACTCTAAAAAT 57.495 32.000 0.00 0.00 0.00 1.82
2479 2899 7.581476 TCAATCACGGTCAAACTCTAAAAATC 58.419 34.615 0.00 0.00 0.00 2.17
2480 2900 7.227711 TCAATCACGGTCAAACTCTAAAAATCA 59.772 33.333 0.00 0.00 0.00 2.57
2481 2901 6.928979 TCACGGTCAAACTCTAAAAATCAA 57.071 33.333 0.00 0.00 0.00 2.57
2482 2902 7.323049 TCACGGTCAAACTCTAAAAATCAAA 57.677 32.000 0.00 0.00 0.00 2.69
2483 2903 7.936584 TCACGGTCAAACTCTAAAAATCAAAT 58.063 30.769 0.00 0.00 0.00 2.32
2484 2904 8.073768 TCACGGTCAAACTCTAAAAATCAAATC 58.926 33.333 0.00 0.00 0.00 2.17
2485 2905 8.076178 CACGGTCAAACTCTAAAAATCAAATCT 58.924 33.333 0.00 0.00 0.00 2.40
2486 2906 9.280174 ACGGTCAAACTCTAAAAATCAAATCTA 57.720 29.630 0.00 0.00 0.00 1.98
2515 2935 6.618811 ACTTAACCTTACCATATATCGCTCG 58.381 40.000 0.00 0.00 0.00 5.03
2516 2936 6.432162 ACTTAACCTTACCATATATCGCTCGA 59.568 38.462 0.00 0.00 0.00 4.04
2517 2937 5.916661 AACCTTACCATATATCGCTCGAT 57.083 39.130 9.81 9.81 38.54 3.59
2518 2938 5.502153 ACCTTACCATATATCGCTCGATC 57.498 43.478 8.14 0.00 36.17 3.69
2519 2939 4.948004 ACCTTACCATATATCGCTCGATCA 59.052 41.667 8.14 0.00 36.17 2.92
2520 2940 5.163642 ACCTTACCATATATCGCTCGATCAC 60.164 44.000 8.14 0.00 36.17 3.06
2521 2941 5.163652 CCTTACCATATATCGCTCGATCACA 60.164 44.000 8.14 0.00 36.17 3.58
2522 2942 4.991153 ACCATATATCGCTCGATCACAT 57.009 40.909 8.14 0.14 36.17 3.21
2523 2943 5.330455 ACCATATATCGCTCGATCACATT 57.670 39.130 8.14 0.00 36.17 2.71
2524 2944 5.724328 ACCATATATCGCTCGATCACATTT 58.276 37.500 8.14 0.00 36.17 2.32
2525 2945 5.807520 ACCATATATCGCTCGATCACATTTC 59.192 40.000 8.14 0.00 36.17 2.17
2526 2946 6.038985 CCATATATCGCTCGATCACATTTCT 58.961 40.000 8.14 0.00 36.17 2.52
2527 2947 6.533012 CCATATATCGCTCGATCACATTTCTT 59.467 38.462 8.14 0.00 36.17 2.52
2528 2948 7.063898 CCATATATCGCTCGATCACATTTCTTT 59.936 37.037 8.14 0.00 36.17 2.52
2529 2949 6.851222 ATATCGCTCGATCACATTTCTTTT 57.149 33.333 8.14 0.00 36.17 2.27
2530 2950 5.551760 ATCGCTCGATCACATTTCTTTTT 57.448 34.783 0.00 0.00 0.00 1.94
2531 2951 6.662414 ATCGCTCGATCACATTTCTTTTTA 57.338 33.333 0.00 0.00 0.00 1.52
2532 2952 6.094739 TCGCTCGATCACATTTCTTTTTAG 57.905 37.500 0.00 0.00 0.00 1.85
2533 2953 5.867174 TCGCTCGATCACATTTCTTTTTAGA 59.133 36.000 0.00 0.00 0.00 2.10
2534 2954 6.367695 TCGCTCGATCACATTTCTTTTTAGAA 59.632 34.615 0.00 0.00 0.00 2.10
2535 2955 7.015289 CGCTCGATCACATTTCTTTTTAGAAA 58.985 34.615 3.12 3.12 41.33 2.52
2536 2956 7.215194 CGCTCGATCACATTTCTTTTTAGAAAG 59.785 37.037 6.50 0.00 42.92 2.62
2537 2957 7.483059 GCTCGATCACATTTCTTTTTAGAAAGG 59.517 37.037 9.86 9.86 42.89 3.11
2538 2958 8.615878 TCGATCACATTTCTTTTTAGAAAGGA 57.384 30.769 16.31 9.41 40.66 3.36
2539 2959 8.721478 TCGATCACATTTCTTTTTAGAAAGGAG 58.279 33.333 16.31 10.18 40.66 3.69
2540 2960 7.965107 CGATCACATTTCTTTTTAGAAAGGAGG 59.035 37.037 16.31 9.52 40.66 4.30
2541 2961 6.981722 TCACATTTCTTTTTAGAAAGGAGGC 58.018 36.000 16.31 0.00 40.66 4.70
2542 2962 6.549364 TCACATTTCTTTTTAGAAAGGAGGCA 59.451 34.615 16.31 0.00 40.66 4.75
2543 2963 7.233348 TCACATTTCTTTTTAGAAAGGAGGCAT 59.767 33.333 16.31 0.00 40.66 4.40
2544 2964 7.543520 CACATTTCTTTTTAGAAAGGAGGCATC 59.456 37.037 16.31 0.00 40.66 3.91
2558 2978 3.546543 CATCCGCCCGGCCTTAGA 61.547 66.667 3.10 0.00 34.68 2.10
2559 2979 2.766651 ATCCGCCCGGCCTTAGAA 60.767 61.111 3.10 0.00 34.68 2.10
2560 2980 2.147387 ATCCGCCCGGCCTTAGAAT 61.147 57.895 3.10 0.00 34.68 2.40
2561 2981 2.397413 ATCCGCCCGGCCTTAGAATG 62.397 60.000 3.10 0.00 34.68 2.67
2562 2982 2.504032 CGCCCGGCCTTAGAATGA 59.496 61.111 3.10 0.00 0.00 2.57
2563 2983 1.153249 CGCCCGGCCTTAGAATGAA 60.153 57.895 3.10 0.00 0.00 2.57
2564 2984 1.160329 CGCCCGGCCTTAGAATGAAG 61.160 60.000 3.10 0.00 0.00 3.02
2565 2985 1.448119 GCCCGGCCTTAGAATGAAGC 61.448 60.000 0.00 0.00 0.00 3.86
2566 2986 0.819666 CCCGGCCTTAGAATGAAGCC 60.820 60.000 0.00 0.00 0.00 4.35
2567 2987 0.819666 CCGGCCTTAGAATGAAGCCC 60.820 60.000 0.00 0.00 0.00 5.19
2568 2988 0.181350 CGGCCTTAGAATGAAGCCCT 59.819 55.000 0.00 0.00 0.00 5.19
2569 2989 1.408822 CGGCCTTAGAATGAAGCCCTT 60.409 52.381 0.00 0.00 0.00 3.95
2570 2990 2.158813 CGGCCTTAGAATGAAGCCCTTA 60.159 50.000 0.00 0.00 0.00 2.69
2571 2991 3.215151 GGCCTTAGAATGAAGCCCTTAC 58.785 50.000 0.00 0.00 0.00 2.34
2572 2992 3.371595 GGCCTTAGAATGAAGCCCTTACA 60.372 47.826 0.00 0.00 0.00 2.41
2573 2993 4.270008 GCCTTAGAATGAAGCCCTTACAA 58.730 43.478 0.00 0.00 0.00 2.41
2574 2994 4.096532 GCCTTAGAATGAAGCCCTTACAAC 59.903 45.833 0.00 0.00 0.00 3.32
2575 2995 4.640647 CCTTAGAATGAAGCCCTTACAACC 59.359 45.833 0.00 0.00 0.00 3.77
2576 2996 2.711542 AGAATGAAGCCCTTACAACCG 58.288 47.619 0.00 0.00 0.00 4.44
2577 2997 2.304761 AGAATGAAGCCCTTACAACCGA 59.695 45.455 0.00 0.00 0.00 4.69
2578 2998 2.871096 ATGAAGCCCTTACAACCGAA 57.129 45.000 0.00 0.00 0.00 4.30
2579 2999 2.642154 TGAAGCCCTTACAACCGAAA 57.358 45.000 0.00 0.00 0.00 3.46
2580 3000 2.223745 TGAAGCCCTTACAACCGAAAC 58.776 47.619 0.00 0.00 0.00 2.78
2581 3001 1.538512 GAAGCCCTTACAACCGAAACC 59.461 52.381 0.00 0.00 0.00 3.27
2582 3002 0.604511 AGCCCTTACAACCGAAACCG 60.605 55.000 0.00 0.00 0.00 4.44
2583 3003 0.886043 GCCCTTACAACCGAAACCGT 60.886 55.000 0.00 0.00 0.00 4.83
2584 3004 1.150827 CCCTTACAACCGAAACCGTC 58.849 55.000 0.00 0.00 0.00 4.79
2585 3005 1.540797 CCCTTACAACCGAAACCGTCA 60.541 52.381 0.00 0.00 0.00 4.35
2586 3006 2.419667 CCTTACAACCGAAACCGTCAT 58.580 47.619 0.00 0.00 0.00 3.06
2587 3007 2.158841 CCTTACAACCGAAACCGTCATG 59.841 50.000 0.00 0.00 0.00 3.07
2588 3008 2.816204 TACAACCGAAACCGTCATGA 57.184 45.000 0.00 0.00 0.00 3.07
2589 3009 1.223187 ACAACCGAAACCGTCATGAC 58.777 50.000 16.21 16.21 0.00 3.06
2590 3010 1.222300 CAACCGAAACCGTCATGACA 58.778 50.000 24.93 0.00 0.00 3.58
2591 3011 1.070175 CAACCGAAACCGTCATGACAC 60.070 52.381 24.93 9.61 0.00 3.67
2592 3012 0.105224 ACCGAAACCGTCATGACACA 59.895 50.000 24.93 0.00 0.00 3.72
2593 3013 0.511221 CCGAAACCGTCATGACACAC 59.489 55.000 24.93 10.24 0.00 3.82
2594 3014 0.160813 CGAAACCGTCATGACACACG 59.839 55.000 24.93 17.06 35.72 4.49
2595 3015 1.214367 GAAACCGTCATGACACACGT 58.786 50.000 24.93 12.00 34.06 4.49
2596 3016 1.191647 GAAACCGTCATGACACACGTC 59.808 52.381 24.93 11.33 42.93 4.34
2597 3017 0.599204 AACCGTCATGACACACGTCC 60.599 55.000 24.93 0.00 41.85 4.79
2598 3018 1.006688 CCGTCATGACACACGTCCA 60.007 57.895 24.93 0.00 41.85 4.02
2599 3019 0.598942 CCGTCATGACACACGTCCAA 60.599 55.000 24.93 0.00 41.85 3.53
2600 3020 1.213491 CGTCATGACACACGTCCAAA 58.787 50.000 24.93 0.00 41.85 3.28
2601 3021 1.192312 CGTCATGACACACGTCCAAAG 59.808 52.381 24.93 0.83 41.85 2.77
2602 3022 1.069906 GTCATGACACACGTCCAAAGC 60.070 52.381 21.07 0.00 41.85 3.51
2603 3023 0.943673 CATGACACACGTCCAAAGCA 59.056 50.000 0.00 0.00 41.85 3.91
2604 3024 1.069703 CATGACACACGTCCAAAGCAG 60.070 52.381 0.00 0.00 41.85 4.24
2605 3025 0.813610 TGACACACGTCCAAAGCAGG 60.814 55.000 0.00 0.00 41.85 4.85
2606 3026 0.531974 GACACACGTCCAAAGCAGGA 60.532 55.000 0.00 0.00 36.02 3.86
2607 3027 0.107410 ACACACGTCCAAAGCAGGAA 60.107 50.000 0.00 0.00 39.92 3.36
2608 3028 1.021202 CACACGTCCAAAGCAGGAAA 58.979 50.000 0.00 0.00 39.92 3.13
2609 3029 1.002468 CACACGTCCAAAGCAGGAAAG 60.002 52.381 0.00 0.00 39.92 2.62
2610 3030 0.593128 CACGTCCAAAGCAGGAAAGG 59.407 55.000 0.00 0.00 39.92 3.11
2611 3031 0.472471 ACGTCCAAAGCAGGAAAGGA 59.528 50.000 0.00 0.00 39.92 3.36
2612 3032 1.133915 ACGTCCAAAGCAGGAAAGGAA 60.134 47.619 0.00 0.00 39.92 3.36
2613 3033 1.953686 CGTCCAAAGCAGGAAAGGAAA 59.046 47.619 0.00 0.00 39.92 3.13
2614 3034 2.360801 CGTCCAAAGCAGGAAAGGAAAA 59.639 45.455 0.00 0.00 39.92 2.29
2615 3035 3.181480 CGTCCAAAGCAGGAAAGGAAAAA 60.181 43.478 0.00 0.00 39.92 1.94
2616 3036 4.371786 GTCCAAAGCAGGAAAGGAAAAAG 58.628 43.478 0.00 0.00 39.92 2.27
2617 3037 4.030216 TCCAAAGCAGGAAAGGAAAAAGT 58.970 39.130 0.00 0.00 33.93 2.66
2618 3038 5.068591 GTCCAAAGCAGGAAAGGAAAAAGTA 59.931 40.000 0.00 0.00 39.92 2.24
2619 3039 5.068591 TCCAAAGCAGGAAAGGAAAAAGTAC 59.931 40.000 0.00 0.00 33.93 2.73
2620 3040 4.830826 AAGCAGGAAAGGAAAAAGTACG 57.169 40.909 0.00 0.00 0.00 3.67
2621 3041 3.146847 AGCAGGAAAGGAAAAAGTACGG 58.853 45.455 0.00 0.00 0.00 4.02
2622 3042 2.228103 GCAGGAAAGGAAAAAGTACGGG 59.772 50.000 0.00 0.00 0.00 5.28
2623 3043 2.817844 CAGGAAAGGAAAAAGTACGGGG 59.182 50.000 0.00 0.00 0.00 5.73
2624 3044 2.712627 AGGAAAGGAAAAAGTACGGGGA 59.287 45.455 0.00 0.00 0.00 4.81
2625 3045 3.332783 AGGAAAGGAAAAAGTACGGGGAT 59.667 43.478 0.00 0.00 0.00 3.85
2626 3046 4.537288 AGGAAAGGAAAAAGTACGGGGATA 59.463 41.667 0.00 0.00 0.00 2.59
2627 3047 4.637534 GGAAAGGAAAAAGTACGGGGATAC 59.362 45.833 0.00 0.00 0.00 2.24
2628 3048 4.914177 AAGGAAAAAGTACGGGGATACA 57.086 40.909 0.00 0.00 39.74 2.29
2629 3049 4.914177 AGGAAAAAGTACGGGGATACAA 57.086 40.909 0.00 0.00 39.74 2.41
2630 3050 4.840271 AGGAAAAAGTACGGGGATACAAG 58.160 43.478 0.00 0.00 39.74 3.16
2631 3051 3.943381 GGAAAAAGTACGGGGATACAAGG 59.057 47.826 0.00 0.00 39.74 3.61
2632 3052 2.704464 AAAGTACGGGGATACAAGGC 57.296 50.000 0.00 0.00 39.74 4.35
2633 3053 0.835276 AAGTACGGGGATACAAGGCC 59.165 55.000 0.00 0.00 39.74 5.19
2634 3054 1.052694 AGTACGGGGATACAAGGCCC 61.053 60.000 0.00 0.00 43.91 5.80
2635 3055 1.003182 TACGGGGATACAAGGCCCA 59.997 57.895 0.00 0.00 46.57 5.36
2636 3056 0.620990 TACGGGGATACAAGGCCCAA 60.621 55.000 0.00 0.00 46.57 4.12
2637 3057 1.152963 CGGGGATACAAGGCCCAAG 60.153 63.158 0.00 0.00 46.57 3.61
2638 3058 1.230212 GGGGATACAAGGCCCAAGG 59.770 63.158 0.00 0.00 46.57 3.61
2639 3059 1.455773 GGGATACAAGGCCCAAGGC 60.456 63.158 0.00 0.00 44.07 4.35
2648 3068 3.616086 GCCCAAGGCCCATTACAC 58.384 61.111 0.00 0.00 44.06 2.90
2649 3069 2.414785 GCCCAAGGCCCATTACACG 61.415 63.158 0.00 0.00 44.06 4.49
2650 3070 1.301623 CCCAAGGCCCATTACACGA 59.698 57.895 0.00 0.00 0.00 4.35
2651 3071 1.029947 CCCAAGGCCCATTACACGAC 61.030 60.000 0.00 0.00 0.00 4.34
2652 3072 1.366111 CCAAGGCCCATTACACGACG 61.366 60.000 0.00 0.00 0.00 5.12
2653 3073 1.743995 AAGGCCCATTACACGACGC 60.744 57.895 0.00 0.00 0.00 5.19
2654 3074 2.435234 GGCCCATTACACGACGCA 60.435 61.111 0.00 0.00 0.00 5.24
2655 3075 2.461110 GGCCCATTACACGACGCAG 61.461 63.158 0.00 0.00 0.00 5.18
2656 3076 3.089784 CCCATTACACGACGCAGC 58.910 61.111 0.00 0.00 0.00 5.25
2657 3077 1.739929 CCCATTACACGACGCAGCA 60.740 57.895 0.00 0.00 0.00 4.41
2658 3078 1.419922 CCATTACACGACGCAGCAC 59.580 57.895 0.00 0.00 0.00 4.40
2669 3089 2.506438 GCAGCACGGGACTACGTC 60.506 66.667 0.00 0.00 46.75 4.34
2670 3090 2.959372 CAGCACGGGACTACGTCA 59.041 61.111 0.00 0.00 46.75 4.35
2671 3091 1.154016 CAGCACGGGACTACGTCAG 60.154 63.158 0.00 0.00 46.75 3.51
2672 3092 2.181021 GCACGGGACTACGTCAGG 59.819 66.667 0.00 0.00 46.75 3.86
2673 3093 2.181021 CACGGGACTACGTCAGGC 59.819 66.667 0.00 0.00 46.75 4.85
2677 3097 2.753043 GGACTACGTCAGGCCGGA 60.753 66.667 5.05 0.00 44.83 5.14
2678 3098 2.772691 GGACTACGTCAGGCCGGAG 61.773 68.421 5.05 3.27 44.83 4.63
2679 3099 1.748122 GACTACGTCAGGCCGGAGA 60.748 63.158 5.05 0.00 41.44 3.71
2680 3100 1.303888 ACTACGTCAGGCCGGAGAA 60.304 57.895 5.05 0.00 41.44 2.87
2681 3101 1.313812 ACTACGTCAGGCCGGAGAAG 61.314 60.000 5.05 6.67 41.44 2.85
2682 3102 1.001764 TACGTCAGGCCGGAGAAGA 60.002 57.895 5.05 0.00 0.00 2.87
2683 3103 1.310933 TACGTCAGGCCGGAGAAGAC 61.311 60.000 5.05 6.14 0.00 3.01
2684 3104 2.579738 GTCAGGCCGGAGAAGACC 59.420 66.667 5.05 0.00 0.00 3.85
2685 3105 1.985116 GTCAGGCCGGAGAAGACCT 60.985 63.158 5.05 0.00 0.00 3.85
2686 3106 0.683504 GTCAGGCCGGAGAAGACCTA 60.684 60.000 5.05 0.00 0.00 3.08
2687 3107 0.040646 TCAGGCCGGAGAAGACCTAA 59.959 55.000 5.05 0.00 0.00 2.69
2688 3108 0.175989 CAGGCCGGAGAAGACCTAAC 59.824 60.000 5.05 0.00 0.00 2.34
2689 3109 1.141234 GGCCGGAGAAGACCTAACG 59.859 63.158 5.05 0.00 0.00 3.18
2690 3110 1.318158 GGCCGGAGAAGACCTAACGA 61.318 60.000 5.05 0.00 0.00 3.85
2691 3111 0.100861 GCCGGAGAAGACCTAACGAG 59.899 60.000 5.05 0.00 0.00 4.18
2704 3124 3.634568 CTAACGAGGATGTAGAGGCTG 57.365 52.381 0.00 0.00 0.00 4.85
2705 3125 1.853963 AACGAGGATGTAGAGGCTGT 58.146 50.000 0.00 0.00 0.00 4.40
2706 3126 1.394618 ACGAGGATGTAGAGGCTGTC 58.605 55.000 0.00 0.00 0.00 3.51
2707 3127 1.341089 ACGAGGATGTAGAGGCTGTCA 60.341 52.381 0.00 0.00 0.00 3.58
2708 3128 1.751351 CGAGGATGTAGAGGCTGTCAA 59.249 52.381 0.00 0.00 0.00 3.18
2709 3129 2.223688 CGAGGATGTAGAGGCTGTCAAG 60.224 54.545 0.00 0.00 0.00 3.02
2710 3130 2.102252 GAGGATGTAGAGGCTGTCAAGG 59.898 54.545 0.00 0.00 0.00 3.61
2711 3131 1.834263 GGATGTAGAGGCTGTCAAGGT 59.166 52.381 0.00 0.00 0.00 3.50
2712 3132 2.237392 GGATGTAGAGGCTGTCAAGGTT 59.763 50.000 0.00 0.00 0.00 3.50
2713 3133 3.307762 GGATGTAGAGGCTGTCAAGGTTT 60.308 47.826 0.00 0.00 0.00 3.27
2714 3134 3.402628 TGTAGAGGCTGTCAAGGTTTC 57.597 47.619 0.00 0.00 0.00 2.78
2715 3135 2.972713 TGTAGAGGCTGTCAAGGTTTCT 59.027 45.455 0.00 0.00 0.00 2.52
2716 3136 4.157246 TGTAGAGGCTGTCAAGGTTTCTA 58.843 43.478 0.00 0.00 0.00 2.10
2717 3137 3.971245 AGAGGCTGTCAAGGTTTCTAG 57.029 47.619 0.00 0.00 0.00 2.43
2718 3138 2.569404 AGAGGCTGTCAAGGTTTCTAGG 59.431 50.000 0.00 0.00 0.00 3.02
2719 3139 1.630878 AGGCTGTCAAGGTTTCTAGGG 59.369 52.381 0.00 0.00 0.00 3.53
2720 3140 1.454201 GCTGTCAAGGTTTCTAGGGC 58.546 55.000 0.00 0.00 0.00 5.19
2721 3141 1.726853 CTGTCAAGGTTTCTAGGGCG 58.273 55.000 0.00 0.00 0.00 6.13
2722 3142 0.323629 TGTCAAGGTTTCTAGGGCGG 59.676 55.000 0.00 0.00 0.00 6.13
2723 3143 1.025113 GTCAAGGTTTCTAGGGCGGC 61.025 60.000 0.00 0.00 0.00 6.53
2724 3144 2.106683 CAAGGTTTCTAGGGCGGCG 61.107 63.158 0.51 0.51 0.00 6.46
2725 3145 3.325201 AAGGTTTCTAGGGCGGCGG 62.325 63.158 9.78 0.00 0.00 6.13
2726 3146 4.091939 GGTTTCTAGGGCGGCGGT 62.092 66.667 9.78 0.00 0.00 5.68
2727 3147 2.510918 GTTTCTAGGGCGGCGGTC 60.511 66.667 9.78 0.00 0.00 4.79
2728 3148 4.137872 TTTCTAGGGCGGCGGTCG 62.138 66.667 9.78 0.00 42.76 4.79
2741 3161 2.183555 GGTCGACCGGTGATGTCC 59.816 66.667 20.85 5.11 0.00 4.02
2742 3162 2.183555 GTCGACCGGTGATGTCCC 59.816 66.667 14.63 0.00 0.00 4.46
2743 3163 2.036731 TCGACCGGTGATGTCCCT 59.963 61.111 14.63 0.00 0.00 4.20
2744 3164 1.033746 GTCGACCGGTGATGTCCCTA 61.034 60.000 14.63 0.00 0.00 3.53
2745 3165 0.106369 TCGACCGGTGATGTCCCTAT 60.106 55.000 14.63 0.00 0.00 2.57
2746 3166 0.032130 CGACCGGTGATGTCCCTATG 59.968 60.000 14.63 0.00 0.00 2.23
2747 3167 1.410004 GACCGGTGATGTCCCTATGA 58.590 55.000 14.63 0.00 0.00 2.15
2748 3168 1.971357 GACCGGTGATGTCCCTATGAT 59.029 52.381 14.63 0.00 0.00 2.45
2749 3169 1.694150 ACCGGTGATGTCCCTATGATG 59.306 52.381 6.12 0.00 0.00 3.07
2750 3170 1.609061 CCGGTGATGTCCCTATGATGC 60.609 57.143 0.00 0.00 0.00 3.91
2751 3171 1.609061 CGGTGATGTCCCTATGATGCC 60.609 57.143 0.00 0.00 0.00 4.40
2752 3172 1.271597 GGTGATGTCCCTATGATGCCC 60.272 57.143 0.00 0.00 0.00 5.36
2753 3173 0.686789 TGATGTCCCTATGATGCCCG 59.313 55.000 0.00 0.00 0.00 6.13
2754 3174 0.687354 GATGTCCCTATGATGCCCGT 59.313 55.000 0.00 0.00 0.00 5.28
2755 3175 0.687354 ATGTCCCTATGATGCCCGTC 59.313 55.000 0.00 0.00 0.00 4.79
2756 3176 1.006102 GTCCCTATGATGCCCGTCG 60.006 63.158 0.00 0.00 0.00 5.12
2757 3177 1.152631 TCCCTATGATGCCCGTCGA 60.153 57.895 0.00 0.00 0.00 4.20
2758 3178 0.757561 TCCCTATGATGCCCGTCGAA 60.758 55.000 0.00 0.00 0.00 3.71
2759 3179 0.319900 CCCTATGATGCCCGTCGAAG 60.320 60.000 0.00 0.00 0.00 3.79
2760 3180 0.319900 CCTATGATGCCCGTCGAAGG 60.320 60.000 10.80 10.80 0.00 3.46
2767 3187 2.183555 CCCGTCGAAGGGTAGTGC 59.816 66.667 26.55 0.00 46.38 4.40
2768 3188 2.642254 CCCGTCGAAGGGTAGTGCA 61.642 63.158 26.55 0.00 46.38 4.57
2769 3189 1.445582 CCGTCGAAGGGTAGTGCAC 60.446 63.158 9.40 9.40 0.00 4.57
2770 3190 1.585006 CGTCGAAGGGTAGTGCACT 59.415 57.895 25.12 25.12 0.00 4.40
2771 3191 0.038526 CGTCGAAGGGTAGTGCACTT 60.039 55.000 27.06 6.10 44.96 3.16
2772 3192 1.604693 CGTCGAAGGGTAGTGCACTTT 60.605 52.381 27.06 13.39 41.74 2.66
2773 3193 1.798813 GTCGAAGGGTAGTGCACTTTG 59.201 52.381 27.06 10.60 41.74 2.77
2774 3194 0.517316 CGAAGGGTAGTGCACTTTGC 59.483 55.000 27.06 15.22 41.74 3.68
2783 3203 2.669569 GCACTTTGCGCTCCTCCA 60.670 61.111 9.73 0.00 31.71 3.86
2784 3204 2.970974 GCACTTTGCGCTCCTCCAC 61.971 63.158 9.73 0.00 31.71 4.02
2785 3205 2.032681 ACTTTGCGCTCCTCCACC 59.967 61.111 9.73 0.00 0.00 4.61
2786 3206 2.747855 CTTTGCGCTCCTCCACCC 60.748 66.667 9.73 0.00 0.00 4.61
2787 3207 4.697756 TTTGCGCTCCTCCACCCG 62.698 66.667 9.73 0.00 0.00 5.28
2793 3213 4.787280 CTCCTCCACCCGCCCTCT 62.787 72.222 0.00 0.00 0.00 3.69
2796 3216 3.775654 CTCCACCCGCCCTCTGTC 61.776 72.222 0.00 0.00 0.00 3.51
2802 3222 4.003788 CCGCCCTCTGTCCGTGTT 62.004 66.667 0.00 0.00 0.00 3.32
2803 3223 2.030562 CGCCCTCTGTCCGTGTTT 59.969 61.111 0.00 0.00 0.00 2.83
2804 3224 2.027625 CGCCCTCTGTCCGTGTTTC 61.028 63.158 0.00 0.00 0.00 2.78
2805 3225 1.371558 GCCCTCTGTCCGTGTTTCT 59.628 57.895 0.00 0.00 0.00 2.52
2806 3226 0.250338 GCCCTCTGTCCGTGTTTCTT 60.250 55.000 0.00 0.00 0.00 2.52
2807 3227 1.512926 CCCTCTGTCCGTGTTTCTTG 58.487 55.000 0.00 0.00 0.00 3.02
2808 3228 0.868406 CCTCTGTCCGTGTTTCTTGC 59.132 55.000 0.00 0.00 0.00 4.01
2809 3229 0.868406 CTCTGTCCGTGTTTCTTGCC 59.132 55.000 0.00 0.00 0.00 4.52
2810 3230 0.179234 TCTGTCCGTGTTTCTTGCCA 59.821 50.000 0.00 0.00 0.00 4.92
2811 3231 0.588252 CTGTCCGTGTTTCTTGCCAG 59.412 55.000 0.00 0.00 0.00 4.85
2812 3232 0.179234 TGTCCGTGTTTCTTGCCAGA 59.821 50.000 0.00 0.00 0.00 3.86
2813 3233 1.305201 GTCCGTGTTTCTTGCCAGAA 58.695 50.000 0.00 0.00 37.24 3.02
2814 3234 1.264288 GTCCGTGTTTCTTGCCAGAAG 59.736 52.381 0.00 0.00 40.28 2.85
2815 3235 1.134220 TCCGTGTTTCTTGCCAGAAGT 60.134 47.619 0.00 0.00 40.28 3.01
2816 3236 1.676006 CCGTGTTTCTTGCCAGAAGTT 59.324 47.619 0.00 0.00 40.28 2.66
2817 3237 2.099098 CCGTGTTTCTTGCCAGAAGTTT 59.901 45.455 0.00 0.00 40.28 2.66
2818 3238 3.363178 CGTGTTTCTTGCCAGAAGTTTC 58.637 45.455 0.00 0.00 40.28 2.78
2819 3239 3.706698 GTGTTTCTTGCCAGAAGTTTCC 58.293 45.455 0.00 0.00 40.28 3.13
2820 3240 3.130340 GTGTTTCTTGCCAGAAGTTTCCA 59.870 43.478 0.00 0.00 40.28 3.53
2821 3241 3.960102 TGTTTCTTGCCAGAAGTTTCCAT 59.040 39.130 0.00 0.00 40.28 3.41
2822 3242 5.009610 GTGTTTCTTGCCAGAAGTTTCCATA 59.990 40.000 0.00 0.00 40.28 2.74
2823 3243 5.241506 TGTTTCTTGCCAGAAGTTTCCATAG 59.758 40.000 0.00 0.00 40.28 2.23
2824 3244 3.347216 TCTTGCCAGAAGTTTCCATAGC 58.653 45.455 0.00 0.00 0.00 2.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 0.034089 GCATGTGCCCCTAAGGAGTT 60.034 55.000 0.00 0.00 38.24 3.01
70 71 2.662596 CACTTACCAGAGCCGGCA 59.337 61.111 31.54 2.66 0.00 5.69
84 85 2.667318 CGTTGCAATCGTCGCCACT 61.667 57.895 0.59 0.00 0.00 4.00
86 87 2.663520 ACGTTGCAATCGTCGCCA 60.664 55.556 17.43 0.00 36.85 5.69
123 124 0.833287 CCCCACTAGATCCACCACTG 59.167 60.000 0.00 0.00 0.00 3.66
216 218 4.194640 CACGGCACTTACCTAGTAGTCTA 58.805 47.826 0.00 0.00 34.56 2.59
253 255 1.070041 CGCAACGCATGGCAAATTTTT 60.070 42.857 0.00 0.00 0.00 1.94
254 256 0.512085 CGCAACGCATGGCAAATTTT 59.488 45.000 0.00 0.00 0.00 1.82
255 257 0.319383 TCGCAACGCATGGCAAATTT 60.319 45.000 0.00 0.00 0.00 1.82
256 258 0.108709 ATCGCAACGCATGGCAAATT 60.109 45.000 0.00 0.00 0.00 1.82
257 259 0.802994 CATCGCAACGCATGGCAAAT 60.803 50.000 0.00 0.00 0.00 2.32
264 266 3.814268 GCCACCATCGCAACGCAT 61.814 61.111 0.00 0.00 0.00 4.73
356 358 3.440522 TGTCGTTGTGTTCATTGGAAACA 59.559 39.130 0.00 0.00 34.13 2.83
371 373 6.402550 CCTCTCATCCAAAATAAGTGTCGTTG 60.403 42.308 0.00 0.00 0.00 4.10
372 374 5.643777 CCTCTCATCCAAAATAAGTGTCGTT 59.356 40.000 0.00 0.00 0.00 3.85
374 376 4.572389 CCCTCTCATCCAAAATAAGTGTCG 59.428 45.833 0.00 0.00 0.00 4.35
375 377 5.745227 TCCCTCTCATCCAAAATAAGTGTC 58.255 41.667 0.00 0.00 0.00 3.67
376 378 5.251700 ACTCCCTCTCATCCAAAATAAGTGT 59.748 40.000 0.00 0.00 0.00 3.55
377 379 5.749462 ACTCCCTCTCATCCAAAATAAGTG 58.251 41.667 0.00 0.00 0.00 3.16
378 380 7.698163 ATACTCCCTCTCATCCAAAATAAGT 57.302 36.000 0.00 0.00 0.00 2.24
427 813 0.944386 CCGAATAACCAATGCCTCCG 59.056 55.000 0.00 0.00 0.00 4.63
440 826 4.280436 ACATTGAGTTCACCACCGAATA 57.720 40.909 0.00 0.00 0.00 1.75
532 923 7.909777 AACGACAGAATGATAAGTACATACG 57.090 36.000 0.00 0.00 39.69 3.06
565 959 8.485578 ACATTGTATTTCTTCTTTTTACCCCA 57.514 30.769 0.00 0.00 0.00 4.96
574 968 8.396272 AGCTGTGTTACATTGTATTTCTTCTT 57.604 30.769 0.00 0.00 0.00 2.52
583 977 9.199982 GTACTTCTTAAGCTGTGTTACATTGTA 57.800 33.333 0.00 0.00 0.00 2.41
608 1002 9.726438 AATTTAGAATGTTTAGAGCTAGTGTGT 57.274 29.630 0.00 0.00 0.00 3.72
911 1310 0.461548 TGTGCATTGTCCCGCAAAAA 59.538 45.000 0.00 0.00 40.44 1.94
912 1311 0.678395 ATGTGCATTGTCCCGCAAAA 59.322 45.000 0.00 0.00 40.44 2.44
913 1312 0.678395 AATGTGCATTGTCCCGCAAA 59.322 45.000 0.00 0.00 40.44 3.68
914 1313 1.201181 GTAATGTGCATTGTCCCGCAA 59.799 47.619 7.60 0.00 40.44 4.85
915 1314 0.808125 GTAATGTGCATTGTCCCGCA 59.192 50.000 7.60 0.00 35.30 5.69
916 1315 1.094785 AGTAATGTGCATTGTCCCGC 58.905 50.000 7.60 0.00 32.50 6.13
917 1316 1.401552 CCAGTAATGTGCATTGTCCCG 59.598 52.381 7.60 0.00 32.50 5.14
918 1317 1.134946 GCCAGTAATGTGCATTGTCCC 59.865 52.381 7.60 0.00 32.50 4.46
919 1318 2.094675 AGCCAGTAATGTGCATTGTCC 58.905 47.619 7.60 0.00 32.50 4.02
920 1319 3.504863 CAAGCCAGTAATGTGCATTGTC 58.495 45.455 7.60 1.86 32.50 3.18
921 1320 2.231964 CCAAGCCAGTAATGTGCATTGT 59.768 45.455 7.60 0.00 32.50 2.71
922 1321 2.231964 ACCAAGCCAGTAATGTGCATTG 59.768 45.455 7.60 7.28 32.50 2.82
937 1336 7.472543 CCACTTATAAAGATGTGTAACCAAGC 58.527 38.462 0.00 0.00 34.36 4.01
1194 1607 0.247537 CGTCGTCGTCGTCATCATCA 60.248 55.000 3.67 0.00 38.33 3.07
1195 1608 0.025898 TCGTCGTCGTCGTCATCATC 59.974 55.000 11.41 0.00 38.33 2.92
1196 1609 0.247576 GTCGTCGTCGTCGTCATCAT 60.248 55.000 11.41 0.00 38.33 2.45
1218 1631 0.247537 CGTCGTCGTCGTCATCATCA 60.248 55.000 3.67 0.00 38.33 3.07
1224 1637 2.991993 CTCGTCGTCGTCGTCGTCA 61.992 63.158 18.44 3.00 45.27 4.35
1338 1754 2.202946 TGAACGCCGTTGCTGTCA 60.203 55.556 7.45 0.00 34.43 3.58
1346 1762 3.163110 CTTGCAACGTGAACGCCGT 62.163 57.895 2.11 0.00 44.43 5.68
1428 1844 2.505557 GTACCACGAAGACGCCCG 60.506 66.667 0.00 0.00 43.96 6.13
1480 1896 0.620410 TCATGGTCGGGGTCCTCATT 60.620 55.000 0.00 0.00 0.00 2.57
1530 1946 2.745100 TCCTCCTCGTGGTCGTCG 60.745 66.667 2.99 0.00 38.33 5.12
1533 1949 3.450115 GGGTCCTCCTCGTGGTCG 61.450 72.222 2.99 0.00 38.55 4.79
1581 1997 3.029735 TCGTCGTCGTCGTCGTCA 61.030 61.111 18.44 1.12 45.27 4.35
1584 2003 3.397649 ATCGTCGTCGTCGTCGTCG 62.398 63.158 20.39 20.39 45.27 5.12
1587 2006 1.922220 GTCATCGTCGTCGTCGTCG 60.922 63.158 14.18 14.18 46.06 5.12
1593 2012 1.922220 GTCGTCGTCATCGTCGTCG 60.922 63.158 0.00 0.00 45.27 5.12
1602 2021 2.946752 CTCGTGGTCGTCGTCGTCA 61.947 63.158 1.33 0.00 38.33 4.35
1692 2111 1.197430 AGTCCTTCTGCACCTCCTGG 61.197 60.000 0.00 0.00 39.83 4.45
1752 2171 0.944386 CGTACTTGTGCTGTGGCTTT 59.056 50.000 0.00 0.00 39.59 3.51
1948 2367 6.018589 ACTAGTAGAAAAGTTACACCCGAC 57.981 41.667 3.59 0.00 0.00 4.79
1959 2378 9.930693 ACTTTGAGGACAATACTAGTAGAAAAG 57.069 33.333 8.85 10.33 35.85 2.27
2075 2495 4.391830 ACCATGCGTGTAGAAACAATACAG 59.608 41.667 4.96 0.00 37.36 2.74
2103 2523 5.450965 GCCCTTGATCAATGATTCGTCAAAT 60.451 40.000 8.96 0.00 0.00 2.32
2110 2530 4.161001 ACTTTGGCCCTTGATCAATGATTC 59.839 41.667 8.96 0.00 0.00 2.52
2118 2538 0.968405 TGCAACTTTGGCCCTTGATC 59.032 50.000 0.00 0.00 0.00 2.92
2127 2547 8.946085 TCTAATAATCTGTAACTGCAACTTTGG 58.054 33.333 0.00 0.00 0.00 3.28
2186 2606 8.131731 GCATTCCTTCTTTTTCGCTATCTAATT 58.868 33.333 0.00 0.00 0.00 1.40
2197 2617 5.409520 GGTTTCCATGCATTCCTTCTTTTTC 59.590 40.000 0.00 0.00 0.00 2.29
2199 2619 4.347583 TGGTTTCCATGCATTCCTTCTTTT 59.652 37.500 0.00 0.00 0.00 2.27
2201 2621 3.509442 TGGTTTCCATGCATTCCTTCTT 58.491 40.909 0.00 0.00 0.00 2.52
2203 2623 3.959535 TTGGTTTCCATGCATTCCTTC 57.040 42.857 0.00 0.00 31.53 3.46
2245 2665 7.979444 TCCAACTGTTCCATTAAGAGTAAAG 57.021 36.000 0.00 0.00 40.64 1.85
2246 2666 8.160765 TGATCCAACTGTTCCATTAAGAGTAAA 58.839 33.333 0.00 0.00 40.64 2.01
2247 2667 7.685481 TGATCCAACTGTTCCATTAAGAGTAA 58.315 34.615 0.00 0.00 40.64 2.24
2248 2668 7.252612 TGATCCAACTGTTCCATTAAGAGTA 57.747 36.000 0.00 0.00 40.64 2.59
2249 2669 6.126863 TGATCCAACTGTTCCATTAAGAGT 57.873 37.500 0.00 0.00 43.21 3.24
2250 2670 5.587844 CCTGATCCAACTGTTCCATTAAGAG 59.412 44.000 0.00 0.00 34.65 2.85
2251 2671 5.014123 ACCTGATCCAACTGTTCCATTAAGA 59.986 40.000 0.00 0.00 0.00 2.10
2252 2672 5.256474 ACCTGATCCAACTGTTCCATTAAG 58.744 41.667 0.00 0.00 0.00 1.85
2253 2673 5.255397 ACCTGATCCAACTGTTCCATTAA 57.745 39.130 0.00 0.00 0.00 1.40
2254 2674 4.927267 ACCTGATCCAACTGTTCCATTA 57.073 40.909 0.00 0.00 0.00 1.90
2255 2675 3.814504 ACCTGATCCAACTGTTCCATT 57.185 42.857 0.00 0.00 0.00 3.16
2256 2676 3.814504 AACCTGATCCAACTGTTCCAT 57.185 42.857 0.00 0.00 0.00 3.41
2257 2677 3.593442 AAACCTGATCCAACTGTTCCA 57.407 42.857 0.00 0.00 0.00 3.53
2258 2678 4.937201 AAAAACCTGATCCAACTGTTCC 57.063 40.909 0.00 0.00 0.00 3.62
2278 2698 4.993029 ACGAAAGTGGTGGAATGAAAAA 57.007 36.364 0.00 0.00 46.97 1.94
2293 2713 5.623673 CAGTCAAAATAAAACCGGACGAAAG 59.376 40.000 9.46 0.00 0.00 2.62
2294 2714 5.505985 CCAGTCAAAATAAAACCGGACGAAA 60.506 40.000 9.46 0.00 0.00 3.46
2295 2715 4.023878 CCAGTCAAAATAAAACCGGACGAA 60.024 41.667 9.46 0.00 0.00 3.85
2296 2716 3.499157 CCAGTCAAAATAAAACCGGACGA 59.501 43.478 9.46 0.00 0.00 4.20
2297 2717 3.251487 ACCAGTCAAAATAAAACCGGACG 59.749 43.478 9.46 0.00 0.00 4.79
2298 2718 4.841443 ACCAGTCAAAATAAAACCGGAC 57.159 40.909 9.46 0.00 0.00 4.79
2299 2719 5.855740 AAACCAGTCAAAATAAAACCGGA 57.144 34.783 9.46 0.00 0.00 5.14
2300 2720 8.596271 AAATAAACCAGTCAAAATAAAACCGG 57.404 30.769 0.00 0.00 0.00 5.28
2301 2721 9.856803 CAAAATAAACCAGTCAAAATAAAACCG 57.143 29.630 0.00 0.00 0.00 4.44
2305 2725 9.549078 GGGACAAAATAAACCAGTCAAAATAAA 57.451 29.630 0.00 0.00 0.00 1.40
2306 2726 8.151596 GGGGACAAAATAAACCAGTCAAAATAA 58.848 33.333 0.00 0.00 0.00 1.40
2307 2727 7.290248 TGGGGACAAAATAAACCAGTCAAAATA 59.710 33.333 0.00 0.00 37.44 1.40
2308 2728 6.100424 TGGGGACAAAATAAACCAGTCAAAAT 59.900 34.615 0.00 0.00 37.44 1.82
2309 2729 5.425539 TGGGGACAAAATAAACCAGTCAAAA 59.574 36.000 0.00 0.00 37.44 2.44
2310 2730 4.962995 TGGGGACAAAATAAACCAGTCAAA 59.037 37.500 0.00 0.00 37.44 2.69
2311 2731 4.342665 GTGGGGACAAAATAAACCAGTCAA 59.657 41.667 0.00 0.00 46.06 3.18
2312 2732 3.892588 GTGGGGACAAAATAAACCAGTCA 59.107 43.478 0.00 0.00 46.06 3.41
2313 2733 4.149598 AGTGGGGACAAAATAAACCAGTC 58.850 43.478 0.00 0.00 46.06 3.51
2314 2734 4.149598 GAGTGGGGACAAAATAAACCAGT 58.850 43.478 0.00 0.00 46.06 4.00
2315 2735 3.509967 GGAGTGGGGACAAAATAAACCAG 59.490 47.826 0.00 0.00 46.06 4.00
2316 2736 3.502356 GGAGTGGGGACAAAATAAACCA 58.498 45.455 0.00 0.00 46.06 3.67
2317 2737 2.829720 GGGAGTGGGGACAAAATAAACC 59.170 50.000 0.00 0.00 46.06 3.27
2318 2738 3.502356 TGGGAGTGGGGACAAAATAAAC 58.498 45.455 0.00 0.00 46.06 2.01
2319 2739 3.905493 TGGGAGTGGGGACAAAATAAA 57.095 42.857 0.00 0.00 46.06 1.40
2320 2740 3.335183 TGATGGGAGTGGGGACAAAATAA 59.665 43.478 0.00 0.00 46.06 1.40
2321 2741 2.922955 TGATGGGAGTGGGGACAAAATA 59.077 45.455 0.00 0.00 46.06 1.40
2322 2742 1.715931 TGATGGGAGTGGGGACAAAAT 59.284 47.619 0.00 0.00 46.06 1.82
2323 2743 1.153539 TGATGGGAGTGGGGACAAAA 58.846 50.000 0.00 0.00 46.06 2.44
2324 2744 0.404040 GTGATGGGAGTGGGGACAAA 59.596 55.000 0.00 0.00 46.06 2.83
2325 2745 1.497309 GGTGATGGGAGTGGGGACAA 61.497 60.000 0.00 0.00 46.06 3.18
2326 2746 1.923395 GGTGATGGGAGTGGGGACA 60.923 63.158 0.00 0.00 38.70 4.02
2327 2747 0.326238 TAGGTGATGGGAGTGGGGAC 60.326 60.000 0.00 0.00 0.00 4.46
2328 2748 0.326238 GTAGGTGATGGGAGTGGGGA 60.326 60.000 0.00 0.00 0.00 4.81
2329 2749 0.326618 AGTAGGTGATGGGAGTGGGG 60.327 60.000 0.00 0.00 0.00 4.96
2330 2750 1.123928 GAGTAGGTGATGGGAGTGGG 58.876 60.000 0.00 0.00 0.00 4.61
2331 2751 2.035632 GAGAGTAGGTGATGGGAGTGG 58.964 57.143 0.00 0.00 0.00 4.00
2332 2752 2.428890 GTGAGAGTAGGTGATGGGAGTG 59.571 54.545 0.00 0.00 0.00 3.51
2333 2753 2.313342 AGTGAGAGTAGGTGATGGGAGT 59.687 50.000 0.00 0.00 0.00 3.85
2334 2754 2.692557 CAGTGAGAGTAGGTGATGGGAG 59.307 54.545 0.00 0.00 0.00 4.30
2335 2755 2.624293 CCAGTGAGAGTAGGTGATGGGA 60.624 54.545 0.00 0.00 0.00 4.37
2336 2756 1.759445 CCAGTGAGAGTAGGTGATGGG 59.241 57.143 0.00 0.00 0.00 4.00
2337 2757 2.461695 ACCAGTGAGAGTAGGTGATGG 58.538 52.381 0.00 0.00 32.04 3.51
2338 2758 4.543590 AAACCAGTGAGAGTAGGTGATG 57.456 45.455 0.00 0.00 33.93 3.07
2339 2759 6.670027 AGAATAAACCAGTGAGAGTAGGTGAT 59.330 38.462 0.00 0.00 33.93 3.06
2340 2760 6.017192 AGAATAAACCAGTGAGAGTAGGTGA 58.983 40.000 0.00 0.00 33.93 4.02
2341 2761 6.287589 AGAATAAACCAGTGAGAGTAGGTG 57.712 41.667 0.00 0.00 33.93 4.00
2342 2762 5.125739 CGAGAATAAACCAGTGAGAGTAGGT 59.874 44.000 0.00 0.00 35.47 3.08
2343 2763 5.583495 CGAGAATAAACCAGTGAGAGTAGG 58.417 45.833 0.00 0.00 0.00 3.18
2344 2764 5.038033 GCGAGAATAAACCAGTGAGAGTAG 58.962 45.833 0.00 0.00 0.00 2.57
2345 2765 4.142227 GGCGAGAATAAACCAGTGAGAGTA 60.142 45.833 0.00 0.00 0.00 2.59
2346 2766 3.368531 GGCGAGAATAAACCAGTGAGAGT 60.369 47.826 0.00 0.00 0.00 3.24
2347 2767 3.118956 AGGCGAGAATAAACCAGTGAGAG 60.119 47.826 0.00 0.00 0.00 3.20
2348 2768 2.832129 AGGCGAGAATAAACCAGTGAGA 59.168 45.455 0.00 0.00 0.00 3.27
2349 2769 3.190874 GAGGCGAGAATAAACCAGTGAG 58.809 50.000 0.00 0.00 0.00 3.51
2350 2770 2.565391 TGAGGCGAGAATAAACCAGTGA 59.435 45.455 0.00 0.00 0.00 3.41
2351 2771 2.972625 TGAGGCGAGAATAAACCAGTG 58.027 47.619 0.00 0.00 0.00 3.66
2352 2772 3.914426 ATGAGGCGAGAATAAACCAGT 57.086 42.857 0.00 0.00 0.00 4.00
2353 2773 4.035675 GGAAATGAGGCGAGAATAAACCAG 59.964 45.833 0.00 0.00 0.00 4.00
2354 2774 3.945285 GGAAATGAGGCGAGAATAAACCA 59.055 43.478 0.00 0.00 0.00 3.67
2355 2775 3.315470 GGGAAATGAGGCGAGAATAAACC 59.685 47.826 0.00 0.00 0.00 3.27
2356 2776 3.945285 TGGGAAATGAGGCGAGAATAAAC 59.055 43.478 0.00 0.00 0.00 2.01
2357 2777 4.229304 TGGGAAATGAGGCGAGAATAAA 57.771 40.909 0.00 0.00 0.00 1.40
2358 2778 3.924114 TGGGAAATGAGGCGAGAATAA 57.076 42.857 0.00 0.00 0.00 1.40
2359 2779 5.248248 TCATATGGGAAATGAGGCGAGAATA 59.752 40.000 2.13 0.00 0.00 1.75
2360 2780 4.042062 TCATATGGGAAATGAGGCGAGAAT 59.958 41.667 2.13 0.00 0.00 2.40
2361 2781 3.390967 TCATATGGGAAATGAGGCGAGAA 59.609 43.478 2.13 0.00 0.00 2.87
2362 2782 2.972021 TCATATGGGAAATGAGGCGAGA 59.028 45.455 2.13 0.00 0.00 4.04
2363 2783 3.407424 TCATATGGGAAATGAGGCGAG 57.593 47.619 2.13 0.00 0.00 5.03
2364 2784 3.855255 TTCATATGGGAAATGAGGCGA 57.145 42.857 2.13 0.00 34.93 5.54
2365 2785 4.916983 TTTTCATATGGGAAATGAGGCG 57.083 40.909 2.13 0.00 36.71 5.52
2392 2812 3.762407 TGGAAAGTTCTGATCCGTTCA 57.238 42.857 0.00 0.00 35.96 3.18
2393 2813 3.181506 GCATGGAAAGTTCTGATCCGTTC 60.182 47.826 0.00 0.00 35.96 3.95
2394 2814 2.749621 GCATGGAAAGTTCTGATCCGTT 59.250 45.455 0.00 0.00 35.96 4.44
2395 2815 2.359900 GCATGGAAAGTTCTGATCCGT 58.640 47.619 0.00 0.00 35.96 4.69
2396 2816 1.328680 CGCATGGAAAGTTCTGATCCG 59.671 52.381 0.00 0.00 35.96 4.18
2397 2817 2.611292 CTCGCATGGAAAGTTCTGATCC 59.389 50.000 0.00 0.00 0.00 3.36
2398 2818 2.611292 CCTCGCATGGAAAGTTCTGATC 59.389 50.000 0.00 0.00 0.00 2.92
2399 2819 2.636830 CCTCGCATGGAAAGTTCTGAT 58.363 47.619 0.00 0.00 0.00 2.90
2400 2820 1.339055 CCCTCGCATGGAAAGTTCTGA 60.339 52.381 0.00 0.00 0.00 3.27
2401 2821 1.089920 CCCTCGCATGGAAAGTTCTG 58.910 55.000 0.00 0.00 0.00 3.02
2402 2822 0.678048 GCCCTCGCATGGAAAGTTCT 60.678 55.000 0.00 0.00 34.03 3.01
2403 2823 0.960364 TGCCCTCGCATGGAAAGTTC 60.960 55.000 0.00 0.00 41.12 3.01
2404 2824 0.539438 TTGCCCTCGCATGGAAAGTT 60.539 50.000 0.00 0.00 46.67 2.66
2405 2825 0.539438 TTTGCCCTCGCATGGAAAGT 60.539 50.000 0.00 0.00 46.67 2.66
2406 2826 0.819582 ATTTGCCCTCGCATGGAAAG 59.180 50.000 0.00 0.00 46.67 2.62
2407 2827 1.265236 AATTTGCCCTCGCATGGAAA 58.735 45.000 0.00 0.00 46.67 3.13
2408 2828 2.136298 TAATTTGCCCTCGCATGGAA 57.864 45.000 0.00 0.00 46.67 3.53
2409 2829 2.363306 ATAATTTGCCCTCGCATGGA 57.637 45.000 0.00 0.00 46.67 3.41
2410 2830 3.457610 AAATAATTTGCCCTCGCATGG 57.542 42.857 0.00 0.00 46.67 3.66
2411 2831 5.186996 ACTAAATAATTTGCCCTCGCATG 57.813 39.130 0.00 0.00 46.67 4.06
2412 2832 6.952773 TTACTAAATAATTTGCCCTCGCAT 57.047 33.333 0.00 0.00 46.67 4.73
2413 2833 6.734137 CATTACTAAATAATTTGCCCTCGCA 58.266 36.000 0.00 0.00 35.68 5.10
2414 2834 5.629435 GCATTACTAAATAATTTGCCCTCGC 59.371 40.000 0.00 0.00 30.54 5.03
2415 2835 6.016276 AGGCATTACTAAATAATTTGCCCTCG 60.016 38.462 8.10 0.00 44.90 4.63
2416 2836 7.290110 AGGCATTACTAAATAATTTGCCCTC 57.710 36.000 8.10 0.00 44.90 4.30
2417 2837 7.675161 AAGGCATTACTAAATAATTTGCCCT 57.325 32.000 8.10 0.00 44.90 5.19
2418 2838 9.996554 ATAAAGGCATTACTAAATAATTTGCCC 57.003 29.630 8.10 0.00 44.90 5.36
2436 2856 8.344831 CGTGATTGATTCTTTCATATAAAGGCA 58.655 33.333 0.00 0.00 33.34 4.75
2437 2857 7.805071 CCGTGATTGATTCTTTCATATAAAGGC 59.195 37.037 0.00 0.00 33.34 4.35
2438 2858 8.840321 ACCGTGATTGATTCTTTCATATAAAGG 58.160 33.333 0.00 0.00 33.34 3.11
2439 2859 9.869844 GACCGTGATTGATTCTTTCATATAAAG 57.130 33.333 0.00 0.00 33.34 1.85
2440 2860 9.389755 TGACCGTGATTGATTCTTTCATATAAA 57.610 29.630 0.00 0.00 33.34 1.40
2441 2861 8.956533 TGACCGTGATTGATTCTTTCATATAA 57.043 30.769 0.00 0.00 33.34 0.98
2442 2862 8.956533 TTGACCGTGATTGATTCTTTCATATA 57.043 30.769 0.00 0.00 33.34 0.86
2443 2863 7.864108 TTGACCGTGATTGATTCTTTCATAT 57.136 32.000 0.00 0.00 33.34 1.78
2444 2864 7.390440 AGTTTGACCGTGATTGATTCTTTCATA 59.610 33.333 0.00 0.00 33.34 2.15
2445 2865 6.207417 AGTTTGACCGTGATTGATTCTTTCAT 59.793 34.615 0.00 0.00 33.34 2.57
2446 2866 5.530915 AGTTTGACCGTGATTGATTCTTTCA 59.469 36.000 0.00 0.00 0.00 2.69
2447 2867 6.002062 AGTTTGACCGTGATTGATTCTTTC 57.998 37.500 0.00 0.00 0.00 2.62
2448 2868 5.765182 AGAGTTTGACCGTGATTGATTCTTT 59.235 36.000 0.00 0.00 0.00 2.52
2449 2869 5.308825 AGAGTTTGACCGTGATTGATTCTT 58.691 37.500 0.00 0.00 0.00 2.52
2450 2870 4.899502 AGAGTTTGACCGTGATTGATTCT 58.100 39.130 0.00 0.00 0.00 2.40
2451 2871 6.721571 TTAGAGTTTGACCGTGATTGATTC 57.278 37.500 0.00 0.00 0.00 2.52
2452 2872 7.504924 TTTTAGAGTTTGACCGTGATTGATT 57.495 32.000 0.00 0.00 0.00 2.57
2453 2873 7.504924 TTTTTAGAGTTTGACCGTGATTGAT 57.495 32.000 0.00 0.00 0.00 2.57
2454 2874 6.928979 TTTTTAGAGTTTGACCGTGATTGA 57.071 33.333 0.00 0.00 0.00 2.57
2455 2875 7.359595 TGATTTTTAGAGTTTGACCGTGATTG 58.640 34.615 0.00 0.00 0.00 2.67
2456 2876 7.504924 TGATTTTTAGAGTTTGACCGTGATT 57.495 32.000 0.00 0.00 0.00 2.57
2457 2877 7.504924 TTGATTTTTAGAGTTTGACCGTGAT 57.495 32.000 0.00 0.00 0.00 3.06
2458 2878 6.928979 TTGATTTTTAGAGTTTGACCGTGA 57.071 33.333 0.00 0.00 0.00 4.35
2459 2879 8.076178 AGATTTGATTTTTAGAGTTTGACCGTG 58.924 33.333 0.00 0.00 0.00 4.94
2460 2880 8.166422 AGATTTGATTTTTAGAGTTTGACCGT 57.834 30.769 0.00 0.00 0.00 4.83
2489 2909 8.239314 CGAGCGATATATGGTAAGGTTAAGTAA 58.761 37.037 0.00 0.00 0.00 2.24
2490 2910 7.607607 TCGAGCGATATATGGTAAGGTTAAGTA 59.392 37.037 0.00 0.00 0.00 2.24
2491 2911 6.432162 TCGAGCGATATATGGTAAGGTTAAGT 59.568 38.462 0.00 0.00 0.00 2.24
2492 2912 6.849502 TCGAGCGATATATGGTAAGGTTAAG 58.150 40.000 0.00 0.00 0.00 1.85
2493 2913 6.822667 TCGAGCGATATATGGTAAGGTTAA 57.177 37.500 0.00 0.00 0.00 2.01
2494 2914 6.600427 TGATCGAGCGATATATGGTAAGGTTA 59.400 38.462 5.24 0.00 34.60 2.85
2495 2915 5.417894 TGATCGAGCGATATATGGTAAGGTT 59.582 40.000 5.24 0.00 34.60 3.50
2496 2916 4.948004 TGATCGAGCGATATATGGTAAGGT 59.052 41.667 5.24 0.00 34.60 3.50
2497 2917 5.163652 TGTGATCGAGCGATATATGGTAAGG 60.164 44.000 5.24 0.00 34.60 2.69
2498 2918 5.880341 TGTGATCGAGCGATATATGGTAAG 58.120 41.667 5.24 0.00 34.60 2.34
2499 2919 5.890424 TGTGATCGAGCGATATATGGTAA 57.110 39.130 5.24 0.00 34.60 2.85
2500 2920 6.451064 AATGTGATCGAGCGATATATGGTA 57.549 37.500 5.24 0.00 34.60 3.25
2501 2921 4.991153 ATGTGATCGAGCGATATATGGT 57.009 40.909 5.24 0.00 34.60 3.55
2502 2922 6.038985 AGAAATGTGATCGAGCGATATATGG 58.961 40.000 5.24 0.00 34.60 2.74
2503 2923 7.517343 AAGAAATGTGATCGAGCGATATATG 57.483 36.000 5.24 0.00 34.60 1.78
2504 2924 8.539770 AAAAGAAATGTGATCGAGCGATATAT 57.460 30.769 5.24 0.00 34.60 0.86
2505 2925 7.946655 AAAAGAAATGTGATCGAGCGATATA 57.053 32.000 5.24 0.00 34.60 0.86
2506 2926 6.851222 AAAAGAAATGTGATCGAGCGATAT 57.149 33.333 5.24 0.00 34.60 1.63
2507 2927 6.662414 AAAAAGAAATGTGATCGAGCGATA 57.338 33.333 5.24 0.00 34.60 2.92
2508 2928 5.551760 AAAAAGAAATGTGATCGAGCGAT 57.448 34.783 4.89 4.89 37.59 4.58
2509 2929 5.867174 TCTAAAAAGAAATGTGATCGAGCGA 59.133 36.000 0.00 0.00 0.00 4.93
2510 2930 6.094739 TCTAAAAAGAAATGTGATCGAGCG 57.905 37.500 0.00 0.00 0.00 5.03
2511 2931 7.483059 CCTTTCTAAAAAGAAATGTGATCGAGC 59.517 37.037 0.00 0.00 43.90 5.03
2512 2932 8.721478 TCCTTTCTAAAAAGAAATGTGATCGAG 58.279 33.333 1.33 0.00 43.90 4.04
2513 2933 8.615878 TCCTTTCTAAAAAGAAATGTGATCGA 57.384 30.769 1.33 0.00 43.90 3.59
2514 2934 7.965107 CCTCCTTTCTAAAAAGAAATGTGATCG 59.035 37.037 1.33 0.00 43.90 3.69
2515 2935 7.757173 GCCTCCTTTCTAAAAAGAAATGTGATC 59.243 37.037 1.33 0.00 43.90 2.92
2516 2936 7.233348 TGCCTCCTTTCTAAAAAGAAATGTGAT 59.767 33.333 1.33 0.00 43.90 3.06
2517 2937 6.549364 TGCCTCCTTTCTAAAAAGAAATGTGA 59.451 34.615 1.33 0.00 43.90 3.58
2518 2938 6.748132 TGCCTCCTTTCTAAAAAGAAATGTG 58.252 36.000 1.33 1.11 43.90 3.21
2519 2939 6.976934 TGCCTCCTTTCTAAAAAGAAATGT 57.023 33.333 1.33 0.00 43.90 2.71
2520 2940 7.038048 GGATGCCTCCTTTCTAAAAAGAAATG 58.962 38.462 0.00 0.00 43.90 2.32
2521 2941 6.127619 CGGATGCCTCCTTTCTAAAAAGAAAT 60.128 38.462 6.46 0.00 43.90 2.17
2522 2942 5.183140 CGGATGCCTCCTTTCTAAAAAGAAA 59.817 40.000 6.46 1.04 43.90 2.52
2523 2943 4.700213 CGGATGCCTCCTTTCTAAAAAGAA 59.300 41.667 6.46 0.00 43.90 2.52
2524 2944 4.261801 CGGATGCCTCCTTTCTAAAAAGA 58.738 43.478 6.46 0.00 43.90 2.52
2525 2945 3.181496 GCGGATGCCTCCTTTCTAAAAAG 60.181 47.826 6.46 0.00 39.65 2.27
2526 2946 2.752903 GCGGATGCCTCCTTTCTAAAAA 59.247 45.455 6.46 0.00 39.65 1.94
2527 2947 2.365582 GCGGATGCCTCCTTTCTAAAA 58.634 47.619 6.46 0.00 39.65 1.52
2528 2948 2.038387 GCGGATGCCTCCTTTCTAAA 57.962 50.000 6.46 0.00 39.65 1.85
2529 2949 3.780624 GCGGATGCCTCCTTTCTAA 57.219 52.632 6.46 0.00 39.65 2.10
2541 2961 2.397413 ATTCTAAGGCCGGGCGGATG 62.397 60.000 23.81 14.07 37.50 3.51
2542 2962 2.147387 ATTCTAAGGCCGGGCGGAT 61.147 57.895 23.81 15.42 37.50 4.18
2543 2963 2.766651 ATTCTAAGGCCGGGCGGA 60.767 61.111 23.81 18.60 37.50 5.54
2544 2964 2.591715 CATTCTAAGGCCGGGCGG 60.592 66.667 23.81 16.55 38.57 6.13
2545 2965 1.153249 TTCATTCTAAGGCCGGGCG 60.153 57.895 23.81 8.89 0.00 6.13
2546 2966 1.448119 GCTTCATTCTAAGGCCGGGC 61.448 60.000 22.67 22.67 0.00 6.13
2547 2967 0.819666 GGCTTCATTCTAAGGCCGGG 60.820 60.000 2.18 0.00 44.10 5.73
2548 2968 2.707902 GGCTTCATTCTAAGGCCGG 58.292 57.895 0.00 0.00 44.10 6.13
2552 2972 4.640647 GGTTGTAAGGGCTTCATTCTAAGG 59.359 45.833 0.00 0.00 0.00 2.69
2553 2973 4.332819 CGGTTGTAAGGGCTTCATTCTAAG 59.667 45.833 0.00 0.00 0.00 2.18
2554 2974 4.020039 TCGGTTGTAAGGGCTTCATTCTAA 60.020 41.667 0.00 0.00 0.00 2.10
2555 2975 3.516300 TCGGTTGTAAGGGCTTCATTCTA 59.484 43.478 0.00 0.00 0.00 2.10
2556 2976 2.304761 TCGGTTGTAAGGGCTTCATTCT 59.695 45.455 0.00 0.00 0.00 2.40
2557 2977 2.706890 TCGGTTGTAAGGGCTTCATTC 58.293 47.619 0.00 0.00 0.00 2.67
2558 2978 2.871096 TCGGTTGTAAGGGCTTCATT 57.129 45.000 0.00 0.00 0.00 2.57
2559 2979 2.817844 GTTTCGGTTGTAAGGGCTTCAT 59.182 45.455 0.00 0.00 0.00 2.57
2560 2980 2.223745 GTTTCGGTTGTAAGGGCTTCA 58.776 47.619 0.00 0.00 0.00 3.02
2561 2981 1.538512 GGTTTCGGTTGTAAGGGCTTC 59.461 52.381 0.00 0.00 0.00 3.86
2562 2982 1.612676 GGTTTCGGTTGTAAGGGCTT 58.387 50.000 0.00 0.00 0.00 4.35
2563 2983 0.604511 CGGTTTCGGTTGTAAGGGCT 60.605 55.000 0.00 0.00 0.00 5.19
2564 2984 0.886043 ACGGTTTCGGTTGTAAGGGC 60.886 55.000 0.00 0.00 41.39 5.19
2565 2985 1.150827 GACGGTTTCGGTTGTAAGGG 58.849 55.000 0.00 0.00 41.39 3.95
2566 2986 1.868469 TGACGGTTTCGGTTGTAAGG 58.132 50.000 0.00 0.00 41.39 2.69
2567 2987 3.061322 TCATGACGGTTTCGGTTGTAAG 58.939 45.455 0.00 0.00 41.39 2.34
2568 2988 2.801679 GTCATGACGGTTTCGGTTGTAA 59.198 45.455 10.69 0.00 41.39 2.41
2569 2989 2.223994 TGTCATGACGGTTTCGGTTGTA 60.224 45.455 20.54 0.00 41.39 2.41
2570 2990 1.223187 GTCATGACGGTTTCGGTTGT 58.777 50.000 10.69 0.00 41.39 3.32
2571 2991 1.070175 GTGTCATGACGGTTTCGGTTG 60.070 52.381 20.54 0.00 41.39 3.77
2572 2992 1.223187 GTGTCATGACGGTTTCGGTT 58.777 50.000 20.54 0.00 41.39 4.44
2573 2993 0.105224 TGTGTCATGACGGTTTCGGT 59.895 50.000 20.54 0.00 41.39 4.69
2574 2994 0.511221 GTGTGTCATGACGGTTTCGG 59.489 55.000 20.54 0.00 41.39 4.30
2575 2995 0.160813 CGTGTGTCATGACGGTTTCG 59.839 55.000 20.54 15.40 43.02 3.46
2576 2996 1.191647 GACGTGTGTCATGACGGTTTC 59.808 52.381 20.54 9.46 44.82 2.78
2577 2997 1.214367 GACGTGTGTCATGACGGTTT 58.786 50.000 20.54 4.06 44.82 3.27
2578 2998 2.895039 GACGTGTGTCATGACGGTT 58.105 52.632 20.54 3.34 44.82 4.44
2579 2999 4.647654 GACGTGTGTCATGACGGT 57.352 55.556 20.54 14.88 44.82 4.83
2587 3007 0.531974 TCCTGCTTTGGACGTGTGTC 60.532 55.000 0.00 0.00 44.72 3.67
2588 3008 0.107410 TTCCTGCTTTGGACGTGTGT 60.107 50.000 0.00 0.00 35.58 3.72
2589 3009 1.002468 CTTTCCTGCTTTGGACGTGTG 60.002 52.381 0.00 0.00 35.58 3.82
2590 3010 1.308998 CTTTCCTGCTTTGGACGTGT 58.691 50.000 0.00 0.00 35.58 4.49
2591 3011 0.593128 CCTTTCCTGCTTTGGACGTG 59.407 55.000 0.00 0.00 35.58 4.49
2592 3012 0.472471 TCCTTTCCTGCTTTGGACGT 59.528 50.000 0.00 0.00 35.58 4.34
2593 3013 1.604604 TTCCTTTCCTGCTTTGGACG 58.395 50.000 0.00 0.00 35.58 4.79
2594 3014 4.141937 ACTTTTTCCTTTCCTGCTTTGGAC 60.142 41.667 0.00 0.00 35.58 4.02
2595 3015 4.030216 ACTTTTTCCTTTCCTGCTTTGGA 58.970 39.130 0.00 0.00 0.00 3.53
2596 3016 4.406648 ACTTTTTCCTTTCCTGCTTTGG 57.593 40.909 0.00 0.00 0.00 3.28
2597 3017 4.976116 CGTACTTTTTCCTTTCCTGCTTTG 59.024 41.667 0.00 0.00 0.00 2.77
2598 3018 4.037565 CCGTACTTTTTCCTTTCCTGCTTT 59.962 41.667 0.00 0.00 0.00 3.51
2599 3019 3.568430 CCGTACTTTTTCCTTTCCTGCTT 59.432 43.478 0.00 0.00 0.00 3.91
2600 3020 3.146847 CCGTACTTTTTCCTTTCCTGCT 58.853 45.455 0.00 0.00 0.00 4.24
2601 3021 2.228103 CCCGTACTTTTTCCTTTCCTGC 59.772 50.000 0.00 0.00 0.00 4.85
2602 3022 2.817844 CCCCGTACTTTTTCCTTTCCTG 59.182 50.000 0.00 0.00 0.00 3.86
2603 3023 2.712627 TCCCCGTACTTTTTCCTTTCCT 59.287 45.455 0.00 0.00 0.00 3.36
2604 3024 3.144657 TCCCCGTACTTTTTCCTTTCC 57.855 47.619 0.00 0.00 0.00 3.13
2605 3025 5.247862 TGTATCCCCGTACTTTTTCCTTTC 58.752 41.667 0.00 0.00 0.00 2.62
2606 3026 5.245584 TGTATCCCCGTACTTTTTCCTTT 57.754 39.130 0.00 0.00 0.00 3.11
2607 3027 4.914177 TGTATCCCCGTACTTTTTCCTT 57.086 40.909 0.00 0.00 0.00 3.36
2608 3028 4.324022 CCTTGTATCCCCGTACTTTTTCCT 60.324 45.833 0.00 0.00 0.00 3.36
2609 3029 3.943381 CCTTGTATCCCCGTACTTTTTCC 59.057 47.826 0.00 0.00 0.00 3.13
2610 3030 3.376234 GCCTTGTATCCCCGTACTTTTTC 59.624 47.826 0.00 0.00 0.00 2.29
2611 3031 3.349927 GCCTTGTATCCCCGTACTTTTT 58.650 45.455 0.00 0.00 0.00 1.94
2612 3032 2.356432 GGCCTTGTATCCCCGTACTTTT 60.356 50.000 0.00 0.00 0.00 2.27
2613 3033 1.211212 GGCCTTGTATCCCCGTACTTT 59.789 52.381 0.00 0.00 0.00 2.66
2614 3034 0.835276 GGCCTTGTATCCCCGTACTT 59.165 55.000 0.00 0.00 0.00 2.24
2615 3035 1.052694 GGGCCTTGTATCCCCGTACT 61.053 60.000 0.84 0.00 36.50 2.73
2616 3036 1.339644 TGGGCCTTGTATCCCCGTAC 61.340 60.000 4.53 0.00 41.88 3.67
2617 3037 0.620990 TTGGGCCTTGTATCCCCGTA 60.621 55.000 4.53 0.00 41.88 4.02
2618 3038 1.921869 CTTGGGCCTTGTATCCCCGT 61.922 60.000 4.53 0.00 41.88 5.28
2619 3039 1.152963 CTTGGGCCTTGTATCCCCG 60.153 63.158 4.53 0.00 41.88 5.73
2620 3040 1.230212 CCTTGGGCCTTGTATCCCC 59.770 63.158 4.53 0.00 41.92 4.81
2621 3041 1.455773 GCCTTGGGCCTTGTATCCC 60.456 63.158 4.53 0.00 44.06 3.85
2622 3042 4.259952 GCCTTGGGCCTTGTATCC 57.740 61.111 4.53 0.00 44.06 2.59
2632 3052 1.029947 GTCGTGTAATGGGCCTTGGG 61.030 60.000 4.53 0.00 0.00 4.12
2633 3053 1.366111 CGTCGTGTAATGGGCCTTGG 61.366 60.000 4.53 0.00 0.00 3.61
2634 3054 1.977594 GCGTCGTGTAATGGGCCTTG 61.978 60.000 4.53 0.00 0.00 3.61
2635 3055 1.743995 GCGTCGTGTAATGGGCCTT 60.744 57.895 4.53 0.00 0.00 4.35
2636 3056 2.125269 GCGTCGTGTAATGGGCCT 60.125 61.111 4.53 0.00 0.00 5.19
2637 3057 2.435234 TGCGTCGTGTAATGGGCC 60.435 61.111 0.00 0.00 0.00 5.80
2638 3058 3.089784 CTGCGTCGTGTAATGGGC 58.910 61.111 0.00 0.00 0.00 5.36
2639 3059 1.739929 TGCTGCGTCGTGTAATGGG 60.740 57.895 0.00 0.00 0.00 4.00
2640 3060 1.419922 GTGCTGCGTCGTGTAATGG 59.580 57.895 0.00 0.00 0.00 3.16
2641 3061 1.057208 CGTGCTGCGTCGTGTAATG 59.943 57.895 8.46 0.00 35.54 1.90
2642 3062 2.092291 CCGTGCTGCGTCGTGTAAT 61.092 57.895 13.85 0.00 39.32 1.89
2643 3063 2.731721 CCGTGCTGCGTCGTGTAA 60.732 61.111 13.85 0.00 39.32 2.41
2644 3064 4.710695 CCCGTGCTGCGTCGTGTA 62.711 66.667 13.85 0.00 39.32 2.90
2648 3068 4.111016 TAGTCCCGTGCTGCGTCG 62.111 66.667 9.43 9.43 39.32 5.12
2649 3069 2.506438 GTAGTCCCGTGCTGCGTC 60.506 66.667 0.00 0.00 39.32 5.19
2650 3070 4.415332 CGTAGTCCCGTGCTGCGT 62.415 66.667 0.00 0.00 37.31 5.24
2651 3071 4.415332 ACGTAGTCCCGTGCTGCG 62.415 66.667 0.00 6.96 45.16 5.18
2663 3083 1.030488 TCTTCTCCGGCCTGACGTAG 61.030 60.000 0.00 0.00 0.00 3.51
2664 3084 1.001764 TCTTCTCCGGCCTGACGTA 60.002 57.895 0.00 0.00 0.00 3.57
2665 3085 2.282958 TCTTCTCCGGCCTGACGT 60.283 61.111 0.00 0.00 0.00 4.34
2666 3086 2.182030 GTCTTCTCCGGCCTGACG 59.818 66.667 0.00 0.00 0.00 4.35
2667 3087 0.683504 TAGGTCTTCTCCGGCCTGAC 60.684 60.000 0.00 7.13 32.90 3.51
2668 3088 0.040646 TTAGGTCTTCTCCGGCCTGA 59.959 55.000 0.00 0.00 32.90 3.86
2669 3089 0.175989 GTTAGGTCTTCTCCGGCCTG 59.824 60.000 0.00 0.00 32.90 4.85
2670 3090 1.321074 CGTTAGGTCTTCTCCGGCCT 61.321 60.000 0.00 0.00 35.28 5.19
2671 3091 1.141234 CGTTAGGTCTTCTCCGGCC 59.859 63.158 0.00 0.00 0.00 6.13
2672 3092 0.100861 CTCGTTAGGTCTTCTCCGGC 59.899 60.000 0.00 0.00 0.00 6.13
2673 3093 0.739561 CCTCGTTAGGTCTTCTCCGG 59.260 60.000 0.00 0.00 38.19 5.14
2674 3094 1.747709 TCCTCGTTAGGTCTTCTCCG 58.252 55.000 0.00 0.00 44.09 4.63
2675 3095 3.025262 ACATCCTCGTTAGGTCTTCTCC 58.975 50.000 0.00 0.00 44.09 3.71
2676 3096 5.124645 TCTACATCCTCGTTAGGTCTTCTC 58.875 45.833 0.00 0.00 44.09 2.87
2677 3097 5.113446 TCTACATCCTCGTTAGGTCTTCT 57.887 43.478 0.00 0.00 44.09 2.85
2678 3098 4.276431 CCTCTACATCCTCGTTAGGTCTTC 59.724 50.000 0.00 0.00 44.09 2.87
2679 3099 4.208746 CCTCTACATCCTCGTTAGGTCTT 58.791 47.826 0.00 0.00 44.09 3.01
2680 3100 3.822940 CCTCTACATCCTCGTTAGGTCT 58.177 50.000 0.00 0.00 44.09 3.85
2681 3101 2.293955 GCCTCTACATCCTCGTTAGGTC 59.706 54.545 0.00 0.00 44.09 3.85
2682 3102 2.091775 AGCCTCTACATCCTCGTTAGGT 60.092 50.000 0.00 0.00 44.09 3.08
2683 3103 2.294791 CAGCCTCTACATCCTCGTTAGG 59.705 54.545 0.00 0.00 45.21 2.69
2684 3104 2.952978 ACAGCCTCTACATCCTCGTTAG 59.047 50.000 0.00 0.00 0.00 2.34
2685 3105 2.950309 GACAGCCTCTACATCCTCGTTA 59.050 50.000 0.00 0.00 0.00 3.18
2686 3106 1.751924 GACAGCCTCTACATCCTCGTT 59.248 52.381 0.00 0.00 0.00 3.85
2687 3107 1.341089 TGACAGCCTCTACATCCTCGT 60.341 52.381 0.00 0.00 0.00 4.18
2688 3108 1.393603 TGACAGCCTCTACATCCTCG 58.606 55.000 0.00 0.00 0.00 4.63
2689 3109 2.102252 CCTTGACAGCCTCTACATCCTC 59.898 54.545 0.00 0.00 0.00 3.71
2690 3110 2.114616 CCTTGACAGCCTCTACATCCT 58.885 52.381 0.00 0.00 0.00 3.24
2691 3111 1.834263 ACCTTGACAGCCTCTACATCC 59.166 52.381 0.00 0.00 0.00 3.51
2692 3112 3.618690 AACCTTGACAGCCTCTACATC 57.381 47.619 0.00 0.00 0.00 3.06
2693 3113 3.584848 AGAAACCTTGACAGCCTCTACAT 59.415 43.478 0.00 0.00 0.00 2.29
2694 3114 2.972713 AGAAACCTTGACAGCCTCTACA 59.027 45.455 0.00 0.00 0.00 2.74
2695 3115 3.686916 AGAAACCTTGACAGCCTCTAC 57.313 47.619 0.00 0.00 0.00 2.59
2696 3116 3.769844 CCTAGAAACCTTGACAGCCTCTA 59.230 47.826 0.00 0.00 0.00 2.43
2697 3117 2.569404 CCTAGAAACCTTGACAGCCTCT 59.431 50.000 0.00 0.00 0.00 3.69
2698 3118 2.355209 CCCTAGAAACCTTGACAGCCTC 60.355 54.545 0.00 0.00 0.00 4.70
2699 3119 1.630878 CCCTAGAAACCTTGACAGCCT 59.369 52.381 0.00 0.00 0.00 4.58
2700 3120 1.950954 GCCCTAGAAACCTTGACAGCC 60.951 57.143 0.00 0.00 0.00 4.85
2701 3121 1.454201 GCCCTAGAAACCTTGACAGC 58.546 55.000 0.00 0.00 0.00 4.40
2702 3122 1.676014 CCGCCCTAGAAACCTTGACAG 60.676 57.143 0.00 0.00 0.00 3.51
2703 3123 0.323629 CCGCCCTAGAAACCTTGACA 59.676 55.000 0.00 0.00 0.00 3.58
2704 3124 1.025113 GCCGCCCTAGAAACCTTGAC 61.025 60.000 0.00 0.00 0.00 3.18
2705 3125 1.298667 GCCGCCCTAGAAACCTTGA 59.701 57.895 0.00 0.00 0.00 3.02
2706 3126 2.106683 CGCCGCCCTAGAAACCTTG 61.107 63.158 0.00 0.00 0.00 3.61
2707 3127 2.267961 CGCCGCCCTAGAAACCTT 59.732 61.111 0.00 0.00 0.00 3.50
2708 3128 3.782443 CCGCCGCCCTAGAAACCT 61.782 66.667 0.00 0.00 0.00 3.50
2709 3129 4.091939 ACCGCCGCCCTAGAAACC 62.092 66.667 0.00 0.00 0.00 3.27
2710 3130 2.510918 GACCGCCGCCCTAGAAAC 60.511 66.667 0.00 0.00 0.00 2.78
2711 3131 4.137872 CGACCGCCGCCCTAGAAA 62.138 66.667 0.00 0.00 0.00 2.52
2724 3144 2.183555 GGACATCACCGGTCGACC 59.816 66.667 25.28 25.28 36.12 4.79
2725 3145 1.033746 TAGGGACATCACCGGTCGAC 61.034 60.000 2.59 7.13 36.12 4.20
2726 3146 0.106369 ATAGGGACATCACCGGTCGA 60.106 55.000 2.59 6.66 36.12 4.20
2727 3147 0.032130 CATAGGGACATCACCGGTCG 59.968 60.000 2.59 0.00 36.12 4.79
2728 3148 1.410004 TCATAGGGACATCACCGGTC 58.590 55.000 2.59 0.00 34.52 4.79
2729 3149 1.694150 CATCATAGGGACATCACCGGT 59.306 52.381 0.00 0.00 0.00 5.28
2730 3150 1.609061 GCATCATAGGGACATCACCGG 60.609 57.143 0.00 0.00 0.00 5.28
2731 3151 1.609061 GGCATCATAGGGACATCACCG 60.609 57.143 0.00 0.00 0.00 4.94
2732 3152 1.271597 GGGCATCATAGGGACATCACC 60.272 57.143 0.00 0.00 0.00 4.02
2733 3153 1.609061 CGGGCATCATAGGGACATCAC 60.609 57.143 0.00 0.00 0.00 3.06
2734 3154 0.686789 CGGGCATCATAGGGACATCA 59.313 55.000 0.00 0.00 0.00 3.07
2735 3155 0.687354 ACGGGCATCATAGGGACATC 59.313 55.000 0.00 0.00 0.00 3.06
2736 3156 0.687354 GACGGGCATCATAGGGACAT 59.313 55.000 0.00 0.00 0.00 3.06
2737 3157 1.744320 CGACGGGCATCATAGGGACA 61.744 60.000 0.00 0.00 0.00 4.02
2738 3158 1.006102 CGACGGGCATCATAGGGAC 60.006 63.158 0.00 0.00 0.00 4.46
2739 3159 0.757561 TTCGACGGGCATCATAGGGA 60.758 55.000 0.00 0.00 0.00 4.20
2740 3160 0.319900 CTTCGACGGGCATCATAGGG 60.320 60.000 0.00 0.00 0.00 3.53
2741 3161 0.319900 CCTTCGACGGGCATCATAGG 60.320 60.000 0.00 0.00 0.00 2.57
2742 3162 0.319900 CCCTTCGACGGGCATCATAG 60.320 60.000 14.93 0.00 37.41 2.23
2743 3163 1.745890 CCCTTCGACGGGCATCATA 59.254 57.895 14.93 0.00 37.41 2.15
2744 3164 2.505982 CCCTTCGACGGGCATCAT 59.494 61.111 14.93 0.00 37.41 2.45
2751 3171 1.445582 GTGCACTACCCTTCGACGG 60.446 63.158 10.32 0.00 0.00 4.79
2752 3172 0.038526 AAGTGCACTACCCTTCGACG 60.039 55.000 22.01 0.00 0.00 5.12
2753 3173 1.798813 CAAAGTGCACTACCCTTCGAC 59.201 52.381 22.01 0.00 0.00 4.20
2754 3174 1.876416 GCAAAGTGCACTACCCTTCGA 60.876 52.381 22.01 0.00 44.26 3.71
2755 3175 0.517316 GCAAAGTGCACTACCCTTCG 59.483 55.000 22.01 6.89 44.26 3.79
2756 3176 0.517316 CGCAAAGTGCACTACCCTTC 59.483 55.000 22.01 5.66 45.36 3.46
2757 3177 1.515521 GCGCAAAGTGCACTACCCTT 61.516 55.000 22.01 7.84 45.36 3.95
2758 3178 1.966451 GCGCAAAGTGCACTACCCT 60.966 57.895 22.01 0.19 45.36 4.34
2759 3179 1.912371 GAGCGCAAAGTGCACTACCC 61.912 60.000 22.01 9.99 45.36 3.69
2760 3180 1.497722 GAGCGCAAAGTGCACTACC 59.502 57.895 22.01 10.36 45.36 3.18
2761 3181 0.951040 AGGAGCGCAAAGTGCACTAC 60.951 55.000 22.01 11.95 45.36 2.73
2762 3182 0.670546 GAGGAGCGCAAAGTGCACTA 60.671 55.000 22.01 0.00 45.36 2.74
2763 3183 1.963338 GAGGAGCGCAAAGTGCACT 60.963 57.895 15.25 15.25 45.36 4.40
2764 3184 2.558313 GAGGAGCGCAAAGTGCAC 59.442 61.111 11.47 9.40 45.36 4.57
2765 3185 2.669569 GGAGGAGCGCAAAGTGCA 60.670 61.111 11.47 0.00 45.36 4.57
2766 3186 2.669569 TGGAGGAGCGCAAAGTGC 60.670 61.111 11.47 0.00 40.69 4.40
2767 3187 2.328099 GGTGGAGGAGCGCAAAGTG 61.328 63.158 11.47 0.00 0.00 3.16
2768 3188 2.032681 GGTGGAGGAGCGCAAAGT 59.967 61.111 11.47 0.00 0.00 2.66
2769 3189 2.747855 GGGTGGAGGAGCGCAAAG 60.748 66.667 11.47 0.00 0.00 2.77
2770 3190 4.697756 CGGGTGGAGGAGCGCAAA 62.698 66.667 11.47 0.00 0.00 3.68
2776 3196 4.787280 AGAGGGCGGGTGGAGGAG 62.787 72.222 0.00 0.00 0.00 3.69
2779 3199 3.775654 GACAGAGGGCGGGTGGAG 61.776 72.222 0.00 0.00 0.00 3.86
2785 3205 3.530910 AAACACGGACAGAGGGCGG 62.531 63.158 0.00 0.00 0.00 6.13
2786 3206 2.027625 GAAACACGGACAGAGGGCG 61.028 63.158 0.00 0.00 0.00 6.13
2787 3207 0.250338 AAGAAACACGGACAGAGGGC 60.250 55.000 0.00 0.00 0.00 5.19
2788 3208 1.512926 CAAGAAACACGGACAGAGGG 58.487 55.000 0.00 0.00 0.00 4.30
2789 3209 0.868406 GCAAGAAACACGGACAGAGG 59.132 55.000 0.00 0.00 0.00 3.69
2790 3210 0.868406 GGCAAGAAACACGGACAGAG 59.132 55.000 0.00 0.00 0.00 3.35
2791 3211 0.179234 TGGCAAGAAACACGGACAGA 59.821 50.000 0.00 0.00 0.00 3.41
2792 3212 0.588252 CTGGCAAGAAACACGGACAG 59.412 55.000 0.00 0.00 0.00 3.51
2793 3213 0.179234 TCTGGCAAGAAACACGGACA 59.821 50.000 0.00 0.00 0.00 4.02
2794 3214 1.264288 CTTCTGGCAAGAAACACGGAC 59.736 52.381 4.77 0.00 41.89 4.79
2795 3215 1.134220 ACTTCTGGCAAGAAACACGGA 60.134 47.619 4.77 0.00 41.89 4.69
2796 3216 1.308998 ACTTCTGGCAAGAAACACGG 58.691 50.000 4.77 0.00 41.89 4.94
2797 3217 3.363178 GAAACTTCTGGCAAGAAACACG 58.637 45.455 4.77 0.00 41.89 4.49
2798 3218 3.130340 TGGAAACTTCTGGCAAGAAACAC 59.870 43.478 4.77 0.00 41.89 3.32
2799 3219 3.360867 TGGAAACTTCTGGCAAGAAACA 58.639 40.909 4.77 0.00 41.89 2.83
2800 3220 4.590850 ATGGAAACTTCTGGCAAGAAAC 57.409 40.909 4.77 0.00 41.89 2.78
2801 3221 4.218417 GCTATGGAAACTTCTGGCAAGAAA 59.782 41.667 4.77 0.00 41.89 2.52
2802 3222 3.758554 GCTATGGAAACTTCTGGCAAGAA 59.241 43.478 2.88 2.88 40.20 2.52
2803 3223 3.347216 GCTATGGAAACTTCTGGCAAGA 58.653 45.455 0.00 0.00 0.00 3.02
2804 3224 3.772060 GCTATGGAAACTTCTGGCAAG 57.228 47.619 0.00 0.00 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.