>input_sequence_67810
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----------------------------------------------------ATGGCGGCATCGGCAGCCCACGTCGCGG
CGCTGGCCGCCGTCCTCCTCTTCATCCCTTCCCTCCTCGCCACTGTCGCCGCGCAGCAGGGCAAGGCCAAGGCCTTCTGC
ATCAGCCAGTTCGCCATCGCCAGTCAGGCCTGCTCCATCCTGCCGCCCAGCCCCCCGGAGGACGACCATCACCACCACCA
CGACGATGATGATGACGACGACGACGACGATGATGATGACGACGACGAC---GACGAGCACCATGGCGGTGACGGTGACC
GCCGCCTCCGTGGACGCCATGGCCACGCGGCGGTCATCAACATCTCGTCCCTTGGCCTGATGGCGGCAAACAATGACAGC
AACGGCGTTCACGTTGCAAGAAACGGCACCGGTCACCATGGTGGCAACCACACCCGCCACGGGCGCGGGCGCAGACGCGG
GCGCGGGCGTCTTCGTGGTACTGGACACGGCCGGCGTGGGCGTGTGCGCGACGGTAATGAGGACCCCGACCATGACGACG
ACCACGAGGAGGACCCCGACCATGACGACGACCACGAGGAGGACCCCGACCACGACGACGACCATGACGACGAACATG--
-ACGACGACGACGACGACGATGACGACGACGACCACGAGCACAATGACGACGACCACGAGCACCACCACGACGAGGAGCT
CCGGGCGTACCGCGACTGCTGCCGGTGGCTCCAGGAGGTGCAGAAGGACTGTGTGTGCGAGGCGCTCCTGCGGCTGCCGC
CGTTCCTCGTAAAGCCACAGCACAAGTACGTCGTCCGGGTTGGGCGGACGTGCCGGATCGTCTACCGCTGCGGCGGCGTG
TAG-----------------------------------------------------------------------------
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>chr4B_1_TraesCS4B01G155100
TCAAGGGCGATGGTCCTAACTCCTTAGGGGCACATGCACGAAGACATCCGGGCTGTCATTGTCAAGATCATGCCGGCTCT
GGTAAGTGGCGACGATTGCAACGTGTCGATGACTCATTCTGGCCAGTGGTGGATCTAGTGGGGCA-CCCCTGTAAAATTG
CAAAATGAATTTTACTATGTACCTTGGACTAAATATCTATCAAGTTAATGTTATTTTTAGACTACTAGGTAAGTGCCGTG
CATTTTCCTCAAAAAAAAATTTGCCATGCGTTGCGATGGTGGCATAAATATTTTAATAGATTGACCAGTGACTACAGTCT
ATTATTACATTAGTGCACTAAAATCTTAGCTAGTTTTTGTTTCCAATGAACACAACGACA--------------------
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--------------------------------------CTTATTTTGGATGAGAGGGAGTATAAATTTTCATAAATTTT-
-----GTTCTGGCGGAGGCATTGGTTATTCGGTGGTG-----AACTCAATGTAATCTTTCCAATTTTGCTAAAGCATTGG
GTGCTTTGTACTTCCGATGATATTTGACAATTTGTTTTGTATC---GTATGTACTTATCATTCTGTCGTTTAACCAGCTG
GGGTAAAAAGAAGAAATACAATGTAACACAGCTTAAGAAGTACACACTAGCTCTAAACATTCTAAATTACGCGGACTTGT
GTAAAGATTGACGAAGATAATAATTTAGAAAGTTTTGTACAACCAAATTGTCACTGGCCTCTCATCAACAATGCACGCCT
GCATGCATGCATGTAAACAAGGTGGACATGGCTGAACAATCCTGG--ATGCACGCCATCGTTATGAAGCACCTAACTAAT
TACAACCATGCACCATGCTGTGTGCATCTCCATCGATCTGGTCACTCCCTACCCGGCCTTGACCCCAACTACTTAATAA-
--CCTCTCTAATACACATTACTGGATTTTTTTTTGCGGGACAATGCACATTACTGGCTTGGTTACACATCTTTATAAG--
-TGGCCGGCAT-----------GCACTCCACATAGCAGCCACGACTCAGTAGATGGCGGCATCGGCAGCCCACGTCGCGG
CGCTGGCCGCCGTCCTCCTCTTCATCCCTTCCCTCCTCGCCACTGTCGCCGCGCAGCAGGGCAAGGCCAAGGCCTTCTGC
ATCAGCCAGTTCGCCATCGCCAGTCAGGCCTGCTCCATCCTGCCGCCCAGCCCCCCGGAGGACGACCATCACCACCACCA
CGACGATGATGATGACGACGACGACGACGATGATGATGACGACGACGAC---GACGAGCACCATGGCGGTGACGGTGACC
GCCGCCTCCGTGGACGCCATGGCCACGCGGCGGTCATCAACATCTCGTCCCTTGGCCTGATGGCGGCAAACAATGACAGC
AACGGCGTTCACGTTGCAAGAAACGGCACCGGTCACCATGGTGGCAACCACACCCGCCACGGGCGCGGGCGCAGACGCGG
GCGCGGGCGTCTTCGTGGTACTGGACACGGCCGGCGTGGGCGTGTGCGCGACGGTAATGAGGACCCCGACCATGACGACG
ACCACGAGGAGGACCCCGACCATGACGACGACCACGAGGAGGACCCCGACCACGACGACGACCATGACGACGAACATG--
-ACGACGACGACGACGACGATGACGACGACGACCACGAGCACAATGACGACGACCACGAGCACCACCACGACGAGGAGCT
CCGGGCGTACCGCGACTGCTGCCGGTGGCTCCAGGAGGTGCAGAAGGACTGTGTGTGCGAGGCGCTCCTGCGGCTGCCGC
CGTTCCTCGTAAAGCCACAGCACAAGTACGTCGTCCGGGTTGGGCGGACGTGCCGGATCGTCTACCGCTGCGGCGGCGTG
TAGCCAGCTGGCCGGTTCACACGTTTGGTTAACTGCACTCGTTGTCCCTGCTTCCTCTCTACGATTACGTGCATGTTTTG
CTCTTCAGTCTACGTAGATGGATAATTAGGTAGGCAGCACGTATGGGTCGGGTGTAACTTTTCTA-CTAGTATTGTCCTC
AAAGTTTTTCGATATGCTTCCATTCGGATAGACTAATTGATAATAATACTACATGTTATCCTCAGAAGGAGTTTACTAGT
AGTAAGTACTATCTCTGTATTGTTTCTACACGCATGGTGCGTATTTGACGAATCATTGATCAAGGGCCAAAGTTGCAGTT
ACAGATTATTAGAACAAAGAGAGAAGAGAAACGAGAAAAAAGAATAATTAGATAGCGAAAAAGAAGGAATGCATGGAAAC
CAATGAACTCTACTATTAAAGGATCTTTACTCTTAATGGAACAGTTGGATCAGGTTTTTTTTCATTCCACCACTTTCGTC
CGGTTTTATTTTGACTGGTTTATTTTGTCCCCACTCCCATCACCTACTCTCACTGGTTTATTCTCGCCTCATTTCCCATA
TGAAAAAAATCTGAACGGATCAGAACTTTCCATGCGAGGGCAAATTATTTAGTAATGCCTTTATATGAAAGAATCAATCA
CGGTCAAACTCTAAAAATCAAATCTAAATTACTTAACCTTACCATATATCGCTCGATCACATTTCTTTTTAGAAAGGAGG
CATCCGCCCGGCCTTAGAATGAAGCCCTTACAACCGAAACCGTCATGACACACGTCCAAAGCAGGAAAGGAAAAAGTACG
GGGATACAAGGCCCAAGGCCCATTACACGACGCAGCACGGGACTACGTCAGGCCGGAGAAGACCTAACGAGGATGTAGAG
GCTGTCAAGGTTTCTAGGGCGGCGGTCGACCGGTGATGTCCCTATGATGCCCGTCGAAGGGTAGTGCACTTTGCGCTCCT
CCACCCGCCCTCTGTCCGTGTTTCTTGCCAGAAGTTTCCATAGC
>chr4A_1
TCAAGGGTGATGGTCCTTACTCCTTAGGGGCACATGCACGAAGACACCCGGGCTGTCATTGTCAAGATGAGGCCGACTCT
TGTAGCGGGTGACGATTCCAATGTGTCGATGACTCATTCTGGCTAGTGATAGATCTAGTGGGGCACCCCCTGTAAAATTG
CAAAATGAATTTTACTATGTACCTTGGACTACATATCTAACAAGTTAATGTTACTTTAAGACTACTAGATAATTGCCGTG
CGTTTCACTCAATTTTTTTTTTGCCGTACGTTGTAACGGTGGCATAAATATTTTAATAGATTGACCAGTGATAGCCCACT
ATTATTACATTAGTGTGCTAAAATCTTAGCTAGTTTTGGTTTCCAATGAACATTATTTACCTACCATCTTGTTGTTAAAT
AATTATTTGGTAACTTATTGACTTATCAAAGTAAGTGGTACTTCTTTTGGTAAGTTAATAAGACATGGACAAATGTGTTG
GTTTAGGGAAGAATTGTGGGAGGAAATTAAAGATGGGAGGAGAAAAGTCATTAAAAGGAAGGAAGGAGAACATATACAAA
GTGGTTGGACATAGTAAAGGGTGAAACCAAACCTTAGGTTCTTTTTAGGTAGTATATATATATGGAGAGAGAGAGAGAGA
TTTGCTGAAATTATTATGATATTTAGACTAAAATAGACTATATAGTACTACCTTCGGTCCATAAAAAGTGTTGCAGTTTG
AACTAACCCCACTCCAAAACTAGTTCAAAACCGCAACCCTTATTTTGGATCAGTGGGTGTATAAATTTTCATAAATTTTG
AACCGGTTCTGGTGGAGGCATTGGTCATTCGGTGGTTCAGAAAACTTGATGTAATCTTTACCG-TTTCCTAAAGCATTGG
GTGCTTGGTGCTTCTGGTGAGATTTGACAATTTGTATTGTACGA---TATGTACTTATCATTCTGTCATTTAACCAGCGG
GGGTAAA-AGAAGAAACACAATGTCACACAGCTTAAGAAGTGCAAACTAGCTCTAAACATGCTAAATTACGGGGACTTGT
GTAAAGATTGACGAAGATAATAATTTAGAAAGTTTTGTACAACCAAATTGTCACTGGCCTGTCACCAACAATGCACGCCT
GCATGCATGCATGTAAACAAGGTGGACATGGCTGAACAATCCTGGATATGCACGCCATCGTTATGAAGCACCTAACTAAT
TACAACCATGCACCACGCTGTGTGCATCTCCATCGATCTGGTCACTCCCTACCCGGCCTTAACCCCAACTACTTAATAAT
AACCTCTCT--------------------------------AATGCACATTACTGACTTGGTTACACATCTTTATAAGAA
GTGGCCGGCATGCACTAGTGTGGCACTCCACATAGTAGCCACGACTCAGTAGATGGCGGCATTGGCGGCCCAAGTCGCGG
CGCTGGCCGCCGTCCTCCTCTTTCTCCCTTCCCTCCTCGCTCCCGTCGCCGCGCAGCAGGGCAAGGCCAAGGCCTTCTGC
ATCAGCCAGTTCGCCATCGCTAGTCAGGCTTGCTCCATCCTGCCGCCCAGCCCCCCGGAGGACGACCATCACCACCACCA
CGA------TGATGACGACGACGACGACGACGATGACGACGACGACGACGATGACGAGCACCATGGCGGTGACGGTGACC
GCCGCCTCCGTGGACGCCATGGCCACGCGGCGGTCTTCAACATCTCGTCCCTTGGCCTGATGGCGGCAAACAACGACAGC
AGCGGCGTTCACGTTGCAAGAAACGGCACAGGTCACCATGGCGGCAACCACACCCACCGCGGGCGCGGGCGCGGACGCGG
GCGTGGGCGTCTTCGTGGTACTGGACGCGGCCGGCGTGGGCGTGTGCGCGACGGTGATGAGGACCCCGATCATGACGACG
ACCACAAGGAGGACCCCGACCATGATGATGACCACGAGGAGGACCCCGACCACGACGACGACCATGACGACGACGACGAA
CATGATGATGATGATGATGACGACGACGATGACCACGACCACGATAACGACAACCACGAGCACCACCACGACGAGGAGCT
CCGGGCGTACCGCGACTGCTGCCGGTGGCTGCAGGAGGTGCAGAAGGACTGTGTGTGCGAGGCGCTCCTGCGGCTGCCGC
CGTTCCTCGTGAAGCCACAGCACAAGTACGTCGTCCGGGTGGGGCGGACGTGCCGGATCGTCTACCGCTGCGGCGGCGTG
TAGCCAACTGGCCGGTTCACACGTTTGTTTAACTGCACTCATTGTCCCTGCTTCCTCTCTACGATTACGTGGATGTTTTG
CTCTTCAGTCTACATAGATGGATAATTAGGTAGGCAGCACGTATGGATCGGGTATAGTTTTTCTACCTAGTATTGTCCTC
AAAGTTTTTCGATGTGCTTCCATTCCGACAGACTAATTGATAATAATACTACATGTTGTCCTCACAAGGAGTT---TAGT
AGTAAGTACTATCTATGTATTGTTTCTACACGCATGATGCGTGTTTGACAAATCATTAATCAAGGGACAAAATTGCAGTT
ACAGATTATTAGAACAAAGAGAGGAGAGAAACCAGAAAAAACAATGATTAGATAGCCACATATAAGGAATGCATGGAAAC
CAATGATCTCTACTACTAAAGGAT--------------------------------------------------------
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>chr4D_1
TCAAGGGCGATGGTCCTTACTCCTTAGGGGCACATGCACGAAGACATCCGGGCTGTCATTATCAAGATCAGGCCGGCTCT
GGTAGGGGGCGACGATTGCAACGTGTCGATGACTCATTCTGGCGAGTGGCGGATCTAGTGGGGCACCCCCTGTAAAATTG
CAAAATGAATTTTACTATTTACCTTGGACTAAATATCTAACAAGTTAATGTTATTTTAAGACTACTAGGTAAGTGCCGTG
CGTTTTCCTCAATTTTTTTTTTGTCGTGCGTTGCAATGATGGCATAAATATTTTAGTAGATTGACCGGTGACTGATTTGA
CAA-----------------------------------------------------------------------------
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-----TTGTATTTCTGATGAGATTTGACAATTTATTTTGTATAGTAGTATGTACTTATCATTCTGTCGTTTAAGCAGCGG
G--TAAA-AGAAGAAACACAGTGTAACACAGCTTAAGAAGTGCAAA------CTAAGCATTCTAAATTACGCGGACTTGT
GTAAAGATTGAGGAAGATAATAATTTAGAAAGTTTTGTACAACCAAATTGTCATTGGCCTCTCACCAACAATGCACGCCT
GCATGCATGCATGTAAACAAGGTGGACATGGCTGAACAATCCTGGAT--GCACGCCATCGTTATGAAGCACCTAACTAAT
TACAACCATGCACCATGCTGTGTGCATCTCCATCGATCTGGTCACTCCCTACCCGGCCTCGACCCCAACTACTTAATAA-
--CCTCTGT--------------------------------AATGCACATTACTGACTTGGCTACACATCTTTATAAG--
-TGGCCGGCAT-----------GCACTCCACATAGCAGCCACGACTCAGTAGATGGCGGCATCGGCGGCCCACGTCGCGG
CCCTGGCCGCCATACTCCTCTTCATCCCTTCCCTCCTCGCCACTGTCGCCGCGCAGCAGGGCAAGGCCAAGGCCTTCTGC
ATCAGCCAGTTCGCCATCGCCAGTCAGGCTTGCTCCATCCTGCCGCCCAGCCCCCCGGAGGACGACCATCACCACCACCA
CGACGAC---GATGATGATGACGACGACGACGATGACGACGACGACGACGACGACGAGCACCATGGCGGCGACGGTGACC
GCCGCCTCCGTGGACGCCATGGCCACGCGGCGGTCATCAACATCTCGTCCCTTGGCCTGATGGCGGCAAACAACGACAGC
AGCGAAGTTCACGTTGCAAGAAACGGCACCGGTCACCATGGCGGCAACCACACCCGCCGCGGGCGCGGGCGCGG------
------GCGTCTTCGTGGTACTGGACGCGGCCGGCGTGGGCGTGTGCGCGACGGTGATGAGGACCCGGACCATGACGACG
ACCACGAGGAGGACCCCGACCATGATGATGACCATGAGGAGGACTCCGACCACGACGACGACCATGACGACGAACC----
--TGATGACGATGACGACGACGACGACGACGACCACGAGCACAATGACGACGACCACGAGCACCACCACGACGAGGAGCT
TCGGGCGTACCGCGACTGCTGCCGGTGGCTGCAGGAGGTGCAGAAGGACTGTGTGTGCGAGGCGCTCCTGCGGCTGCCGC
CGTTCCTCGTGAAACCACAGCACAAGTACGTCGTCCGGGTGGGGCGGACGTGCCGGATCGTCTACCGCTGCGGCGGCGTG
TAGCCAACTGGCCGGTTCACACGTTTGGTTAACTGCACTCGTTGTCCCTGCTTCCTCTCTACGATTACGTGCCTGTTTTG
CTCTTCAGTCTACGTAGATGGATAATTAGGTAGGCAGCACGTATGGATCGGGTGTAATTTTTCTACTAAGTATTGTCCTC
AAAGTTTTTCGATGTGCTTCCATTCGGATAGACTAATTGATAATAATACTACATGTTGTCCTGACAAGGAGTTTACTAGT
AGTAAGTCTATATTGTTTTTTT----------------------------------------------------------
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>SNPs
-----------------S----------------------------------------------------S---------
----S-S------------------------------------S------------------------------------
---------------------------------------S-----------------S----------------------
-S----------SSSSSSS------S--------S--------------------------------------S-SS---
---------------SS--------------------S--------------SS-SSSSS--------------------
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--------------------------------------------------S--S---S----------------------
------------S------------S----------S---------SS-----------S-SSS---S------------
--------------S-----S---------------------S-----------------------------------S-
-------S--------S------------------------S--S-----------------------------------
----------------------------------------------------------------S---------------
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---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S------------------------
------------------------------------------------------------------S-------------
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-----------------------------S--------------------------------------------------
------SSS---------------------S-----S-------------------------------------------
-------------------------------------------------------------------------S------
-S---------------------------------------S----------------S-------------S-------
---S----------------------S----------------------------S------------------------
-------------------------S--S-----------------------------------------------S---
--S--S-----S--------S-----------------------------------------------------------
------------------------------S-------------------------------------------------
----------S-----------------------------S---------------------------------------
------S-------------------------------------------------------------------------
----------------------------------------------S----------S----------------------
-------------S-------------------------------------------S------S---------------
--------------S---------------------S-----S------S-------S--------S----S--------
-----------------------S--------S--------S---S----------S-S-S-S-----------------
------S--------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_85
-----------------------------------------------------------------GATCATGCCGGCTCT
GGTAA---------------------------------------------------------------------------
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>reverse_1608
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-------GATGATGACGACGACGACGA-----------------------------------------------------
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>forward_275
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---------------AAAATTTGCCATGCGTTGCG---------------------------------------------
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>reverse_1631
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------------------------------TGATGATGACGACGACGACG------------------------------
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>forward_837
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----------------GGCATTGGTTATTCGGTGGTG-------------------------------------------
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>reverse_2747
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--------------------------GTCCCCACTCCCATCACCTA----------------------------------
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