Multiple sequence alignment - TraesCS4B01G134400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G134400 chr4B 100.000 3269 0 0 1 3269 175473352 175476620 0.000000e+00 6037.0
1 TraesCS4B01G134400 chr4A 91.641 2871 145 39 1 2818 462222672 462219844 0.000000e+00 3884.0
2 TraesCS4B01G134400 chr4D 93.975 2523 114 15 1 2500 115044898 115047405 0.000000e+00 3783.0
3 TraesCS4B01G134400 chr4D 87.879 297 21 5 2596 2881 115047506 115047798 5.230000e-88 335.0
4 TraesCS4B01G134400 chr4D 84.709 327 43 6 2944 3266 509425536 509425213 1.460000e-83 320.0
5 TraesCS4B01G134400 chr4D 96.226 53 2 0 2499 2551 115047432 115047484 1.620000e-13 87.9
6 TraesCS4B01G134400 chr6D 86.170 1757 189 30 558 2303 158075574 158073861 0.000000e+00 1849.0
7 TraesCS4B01G134400 chr6D 86.503 326 40 4 2945 3269 447067499 447067177 4.010000e-94 355.0
8 TraesCS4B01G134400 chr6D 87.458 295 31 3 2973 3266 273835511 273835800 5.230000e-88 335.0
9 TraesCS4B01G134400 chr6D 93.023 43 2 1 2561 2603 85794572 85794613 9.790000e-06 62.1
10 TraesCS4B01G134400 chr6B 85.983 1755 187 35 558 2299 288793236 288794944 0.000000e+00 1823.0
11 TraesCS4B01G134400 chr6B 97.368 38 1 0 2561 2598 658541547 658541510 7.570000e-07 65.8
12 TraesCS4B01G134400 chr6B 94.737 38 2 0 2561 2598 687728308 687728271 3.520000e-05 60.2
13 TraesCS4B01G134400 chr6A 85.860 1761 189 39 558 2305 213148613 213150326 0.000000e+00 1818.0
14 TraesCS4B01G134400 chr2A 85.759 323 41 4 2950 3269 765241817 765241497 1.450000e-88 337.0
15 TraesCS4B01G134400 chr2A 85.667 300 35 6 2970 3266 180364160 180363866 3.170000e-80 309.0
16 TraesCS4B01G134400 chr1D 85.489 317 41 4 2951 3266 295543938 295544250 3.150000e-85 326.0
17 TraesCS4B01G134400 chr1D 97.619 42 1 0 2883 2924 106837160 106837119 4.520000e-09 73.1
18 TraesCS4B01G134400 chr2D 85.000 320 43 4 2950 3266 571068011 571067694 1.460000e-83 320.0
19 TraesCS4B01G134400 chr7B 84.424 321 48 2 2947 3266 337374540 337374859 6.810000e-82 315.0
20 TraesCS4B01G134400 chr7B 97.436 39 1 0 2561 2599 147514712 147514750 2.110000e-07 67.6
21 TraesCS4B01G134400 chr3B 84.259 324 49 2 2947 3269 780863678 780863356 6.810000e-82 315.0
22 TraesCS4B01G134400 chr3B 97.368 38 1 0 2561 2598 114155395 114155432 7.570000e-07 65.8
23 TraesCS4B01G134400 chr3B 97.368 38 1 0 2561 2598 773362379 773362342 7.570000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G134400 chr4B 175473352 175476620 3268 False 6037.000000 6037 100.000000 1 3269 1 chr4B.!!$F1 3268
1 TraesCS4B01G134400 chr4A 462219844 462222672 2828 True 3884.000000 3884 91.641000 1 2818 1 chr4A.!!$R1 2817
2 TraesCS4B01G134400 chr4D 115044898 115047798 2900 False 1401.966667 3783 92.693333 1 2881 3 chr4D.!!$F1 2880
3 TraesCS4B01G134400 chr6D 158073861 158075574 1713 True 1849.000000 1849 86.170000 558 2303 1 chr6D.!!$R1 1745
4 TraesCS4B01G134400 chr6B 288793236 288794944 1708 False 1823.000000 1823 85.983000 558 2299 1 chr6B.!!$F1 1741
5 TraesCS4B01G134400 chr6A 213148613 213150326 1713 False 1818.000000 1818 85.860000 558 2305 1 chr6A.!!$F1 1747

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
279 286 0.320683 TGTGCCGAGACTGTGATTGG 60.321 55.0 0.00 0.0 0.0 3.16 F
1248 1279 0.901124 ATGAGCTCACGAGGCTTTCT 59.099 50.0 20.97 0.0 40.4 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2259 2290 0.657312 TGCAACACTTTCAGTCAGCG 59.343 50.0 0.00 0.00 0.0 5.18 R
3077 3155 0.030101 AAATTGACCCACGCGTGTTG 59.970 50.0 34.81 27.13 0.0 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.545124 TAGGCGGTTGGCACACAGG 62.545 63.158 0.00 0.00 46.16 4.00
40 41 2.231235 CACAGGGGGCAAATTCAAGTAC 59.769 50.000 0.00 0.00 0.00 2.73
63 64 7.399245 ACAGTTCAGACTATAGACTTTCTCC 57.601 40.000 6.78 0.00 33.90 3.71
65 66 7.451877 ACAGTTCAGACTATAGACTTTCTCCAA 59.548 37.037 6.78 0.00 33.90 3.53
78 79 8.499403 AGACTTTCTCCAAGCATTTATACTTC 57.501 34.615 0.00 0.00 35.65 3.01
79 80 8.325046 AGACTTTCTCCAAGCATTTATACTTCT 58.675 33.333 0.00 0.00 35.65 2.85
123 129 2.044551 GGCTTGGGAGGGAAGCAG 60.045 66.667 0.00 0.00 46.43 4.24
124 130 2.759795 GCTTGGGAGGGAAGCAGT 59.240 61.111 0.00 0.00 44.43 4.40
141 148 6.073548 GGAAGCAGTTATGATTAGGATTCACG 60.074 42.308 0.00 0.00 34.53 4.35
143 150 6.349300 AGCAGTTATGATTAGGATTCACGTT 58.651 36.000 0.00 0.00 0.00 3.99
144 151 6.823689 AGCAGTTATGATTAGGATTCACGTTT 59.176 34.615 0.00 0.00 0.00 3.60
170 177 3.282021 TGCTTAGGAGGCAATCAACATC 58.718 45.455 0.00 0.00 36.71 3.06
178 185 4.036498 GGAGGCAATCAACATCATCTTCAG 59.964 45.833 0.00 0.00 0.00 3.02
187 194 4.815533 ACATCATCTTCAGCACTGTAGT 57.184 40.909 4.49 0.00 31.14 2.73
206 213 7.875327 TGTAGTATATGTGACAGTGAAGCTA 57.125 36.000 0.00 0.00 0.00 3.32
272 279 1.645034 CATAAGGTGTGCCGAGACTG 58.355 55.000 0.00 0.00 40.50 3.51
279 286 0.320683 TGTGCCGAGACTGTGATTGG 60.321 55.000 0.00 0.00 0.00 3.16
321 328 3.868200 CTCTGGGCGGGCCAAAACT 62.868 63.158 24.45 0.00 37.98 2.66
370 377 2.190398 TGCTCTTAGGGCCCAGATTA 57.810 50.000 27.56 4.01 0.00 1.75
392 399 1.465354 GCGCTGCTCTTGACTGAAATG 60.465 52.381 0.00 0.00 0.00 2.32
396 403 3.611057 GCTGCTCTTGACTGAAATGTTGG 60.611 47.826 0.00 0.00 0.00 3.77
479 486 6.761242 GGTATCTAATTTTGCCATTGGTTTCC 59.239 38.462 4.26 0.00 0.00 3.13
510 533 4.202367 GGCTACCTGCATTATAGTTCCACT 60.202 45.833 0.00 0.00 45.15 4.00
525 548 3.912496 TCCACTGACCATATGACTTGG 57.088 47.619 3.65 8.88 40.26 3.61
548 571 6.048509 GGAATGAATCTTCTCTTGACTCCTC 58.951 44.000 0.00 0.00 0.00 3.71
560 583 1.980765 TGACTCCTCAAAGGTCAGCAT 59.019 47.619 0.00 0.00 36.53 3.79
612 635 4.729868 TCATCTTGGGAGATCGACTGATA 58.270 43.478 0.00 0.00 40.67 2.15
623 647 8.091449 GGGAGATCGACTGATAATTGACTATTT 58.909 37.037 0.00 0.00 34.09 1.40
681 705 4.177537 TCTGTTTCATTCTTGGGTTGGA 57.822 40.909 0.00 0.00 0.00 3.53
714 738 7.141758 AGGTCATGTTATATGGAACATCTGT 57.858 36.000 1.56 0.00 44.89 3.41
731 755 5.008415 ACATCTGTTTGTTCAAGCTTGAGAG 59.992 40.000 27.02 14.71 38.61 3.20
788 813 2.871022 CAATCCAGAGCATGCTGTAGTC 59.129 50.000 28.27 10.69 34.06 2.59
887 918 3.664107 TCTGTCCACTTATGCAGTTCAC 58.336 45.455 0.00 0.00 30.92 3.18
905 936 7.865385 GCAGTTCACATTTTTGTCCTGTAAATA 59.135 33.333 0.00 0.00 0.00 1.40
1248 1279 0.901124 ATGAGCTCACGAGGCTTTCT 59.099 50.000 20.97 0.00 40.40 2.52
1335 1366 4.083324 CGCTTGCTTTCTGAAATACAGGAA 60.083 41.667 15.13 6.60 45.76 3.36
1420 1451 7.612633 AGAATAGAGATACCGAGATTACCCTTC 59.387 40.741 0.00 0.00 0.00 3.46
1551 1582 5.493133 ACTACTTCTCTATTGAGCTGACG 57.507 43.478 0.00 0.00 40.03 4.35
1573 1604 5.878116 ACGCCAAGTTTATTTACATCTGCTA 59.122 36.000 0.00 0.00 0.00 3.49
1797 1828 1.743252 GGCTGCTACTGCCAGTGTC 60.743 63.158 7.83 0.00 45.75 3.67
1878 1909 2.978156 TGAGCCAAAACCCAGATTCT 57.022 45.000 0.00 0.00 0.00 2.40
1899 1930 2.357637 TGTTTTCGGAAAGTTCTGCAGG 59.642 45.455 15.13 0.00 33.56 4.85
2259 2290 7.201444 CGAGTGTACCTTTCAGATGTCAAATAC 60.201 40.741 0.00 0.00 0.00 1.89
2271 2302 4.990543 TGTCAAATACGCTGACTGAAAG 57.009 40.909 4.86 0.00 43.03 2.62
2300 2332 3.073650 AGTTGCTTGAGAAGATTCAGGGT 59.926 43.478 0.00 0.00 0.00 4.34
2311 2343 6.601332 AGAAGATTCAGGGTGTTTTAGTTCA 58.399 36.000 0.00 0.00 0.00 3.18
2352 2384 1.304052 TGAAATGGCGGGGGACTTG 60.304 57.895 0.00 0.00 0.00 3.16
2356 2388 1.493854 AATGGCGGGGGACTTGTGTA 61.494 55.000 0.00 0.00 0.00 2.90
2364 2396 2.039879 GGGGGACTTGTGTATGTCTGTT 59.960 50.000 0.00 0.00 32.98 3.16
2371 2403 4.270084 ACTTGTGTATGTCTGTTTCGTGTG 59.730 41.667 0.00 0.00 0.00 3.82
2372 2404 3.787785 TGTGTATGTCTGTTTCGTGTGT 58.212 40.909 0.00 0.00 0.00 3.72
2373 2405 3.553917 TGTGTATGTCTGTTTCGTGTGTG 59.446 43.478 0.00 0.00 0.00 3.82
2374 2406 3.799963 GTGTATGTCTGTTTCGTGTGTGA 59.200 43.478 0.00 0.00 0.00 3.58
2375 2407 4.269123 GTGTATGTCTGTTTCGTGTGTGAA 59.731 41.667 0.00 0.00 0.00 3.18
2376 2408 5.050363 GTGTATGTCTGTTTCGTGTGTGAAT 60.050 40.000 0.00 0.00 0.00 2.57
2377 2409 3.942539 TGTCTGTTTCGTGTGTGAATG 57.057 42.857 0.00 0.00 0.00 2.67
2378 2410 3.266636 TGTCTGTTTCGTGTGTGAATGT 58.733 40.909 0.00 0.00 0.00 2.71
2389 2421 3.498018 GTGTGTGAATGTGTGATGCTACA 59.502 43.478 0.00 0.00 0.00 2.74
2395 2427 6.016443 TGTGAATGTGTGATGCTACATGAAAA 60.016 34.615 0.00 0.00 37.57 2.29
2419 2451 7.035840 AGATGTTATTCAGATGAAATGTGGC 57.964 36.000 0.00 0.00 38.31 5.01
2429 2463 2.703416 TGAAATGTGGCAGTCTAGCAG 58.297 47.619 0.00 0.00 35.83 4.24
2461 2495 4.943705 TGAAAGACCTTCATATGCTTGTCC 59.056 41.667 0.00 0.00 39.20 4.02
2500 2534 7.165460 TGTTTATTCTCTCTGTTCCGTGATA 57.835 36.000 0.00 0.00 0.00 2.15
2503 2537 9.915629 GTTTATTCTCTCTGTTCCGTGATATAT 57.084 33.333 0.00 0.00 0.00 0.86
2543 2605 3.197549 TGTTGCAGCCTATGTGATGACTA 59.802 43.478 0.00 0.00 0.00 2.59
2561 2629 4.006989 GACTACACAACCATGTTGCCATA 58.993 43.478 6.86 0.00 37.82 2.74
2562 2630 3.756434 ACTACACAACCATGTTGCCATAC 59.244 43.478 6.86 0.00 37.82 2.39
2564 2632 2.961741 ACACAACCATGTTGCCATACAA 59.038 40.909 6.86 0.00 37.82 2.41
2565 2633 3.386078 ACACAACCATGTTGCCATACAAA 59.614 39.130 6.86 0.00 40.82 2.83
2566 2634 3.989167 CACAACCATGTTGCCATACAAAG 59.011 43.478 6.86 0.00 40.82 2.77
2567 2635 3.640967 ACAACCATGTTGCCATACAAAGT 59.359 39.130 6.86 0.00 40.82 2.66
2568 2636 4.100808 ACAACCATGTTGCCATACAAAGTT 59.899 37.500 6.86 0.00 40.82 2.66
2569 2637 4.255833 ACCATGTTGCCATACAAAGTTG 57.744 40.909 0.00 0.00 40.82 3.16
2570 2638 3.894427 ACCATGTTGCCATACAAAGTTGA 59.106 39.130 0.00 0.00 40.82 3.18
2571 2639 4.022068 ACCATGTTGCCATACAAAGTTGAG 60.022 41.667 0.00 0.00 40.82 3.02
2572 2640 4.022068 CCATGTTGCCATACAAAGTTGAGT 60.022 41.667 0.00 0.00 40.82 3.41
2573 2641 4.829064 TGTTGCCATACAAAGTTGAGTC 57.171 40.909 0.00 0.00 40.82 3.36
2574 2642 4.203226 TGTTGCCATACAAAGTTGAGTCA 58.797 39.130 0.00 0.00 40.82 3.41
2575 2643 4.036262 TGTTGCCATACAAAGTTGAGTCAC 59.964 41.667 0.00 0.00 40.82 3.67
2576 2644 4.085357 TGCCATACAAAGTTGAGTCACT 57.915 40.909 0.00 0.00 0.00 3.41
2577 2645 4.460263 TGCCATACAAAGTTGAGTCACTT 58.540 39.130 0.00 0.00 38.74 3.16
2578 2646 5.616270 TGCCATACAAAGTTGAGTCACTTA 58.384 37.500 0.00 0.00 35.87 2.24
2579 2647 6.237901 TGCCATACAAAGTTGAGTCACTTAT 58.762 36.000 0.00 0.00 35.87 1.73
2580 2648 7.390823 TGCCATACAAAGTTGAGTCACTTATA 58.609 34.615 0.00 0.00 35.87 0.98
2581 2649 8.046708 TGCCATACAAAGTTGAGTCACTTATAT 58.953 33.333 0.00 0.64 35.87 0.86
2582 2650 8.893727 GCCATACAAAGTTGAGTCACTTATATT 58.106 33.333 0.00 0.00 35.87 1.28
2585 2653 7.687941 ACAAAGTTGAGTCACTTATATTGGG 57.312 36.000 0.00 0.00 35.87 4.12
2586 2654 7.458397 ACAAAGTTGAGTCACTTATATTGGGA 58.542 34.615 0.00 0.00 35.87 4.37
2587 2655 7.390718 ACAAAGTTGAGTCACTTATATTGGGAC 59.609 37.037 0.00 3.45 35.87 4.46
2588 2656 5.661458 AGTTGAGTCACTTATATTGGGACG 58.339 41.667 0.00 0.00 33.84 4.79
2589 2657 4.665833 TGAGTCACTTATATTGGGACGG 57.334 45.455 0.00 0.00 33.84 4.79
2590 2658 3.386726 TGAGTCACTTATATTGGGACGGG 59.613 47.826 0.00 0.00 33.84 5.28
2591 2659 2.704065 AGTCACTTATATTGGGACGGGG 59.296 50.000 5.51 0.00 33.84 5.73
2592 2660 2.051692 TCACTTATATTGGGACGGGGG 58.948 52.381 0.00 0.00 0.00 5.40
2627 2695 8.234136 AGTATTCGTATTGGTGTCTAATCTGA 57.766 34.615 0.00 0.00 0.00 3.27
2674 2746 6.425114 TGTGCACTGTAATTTTGTTTGTGTTT 59.575 30.769 19.41 0.00 0.00 2.83
2682 2754 8.926710 TGTAATTTTGTTTGTGTTTTGTACTGG 58.073 29.630 0.00 0.00 0.00 4.00
2783 2857 9.166173 CACTGTGTATCTTTCCATTGATAGAAA 57.834 33.333 0.00 0.00 33.19 2.52
2794 2868 7.257790 TCCATTGATAGAAAGAGAGGTTTGA 57.742 36.000 0.00 0.00 0.00 2.69
2806 2880 5.941788 AGAGAGGTTTGAAGGTTTACACAT 58.058 37.500 0.00 0.00 0.00 3.21
2861 2939 2.352503 TCGTTTTAGAGGTACACGGC 57.647 50.000 0.00 0.00 0.00 5.68
2881 2959 2.671632 GCGAGGTACAGTTTCTCCTCAC 60.672 54.545 10.07 0.00 44.53 3.51
2882 2960 2.414293 CGAGGTACAGTTTCTCCTCACG 60.414 54.545 10.07 0.00 44.53 4.35
2883 2961 1.272769 AGGTACAGTTTCTCCTCACGC 59.727 52.381 0.00 0.00 0.00 5.34
2884 2962 1.337821 GTACAGTTTCTCCTCACGCG 58.662 55.000 3.53 3.53 0.00 6.01
2885 2963 1.068748 GTACAGTTTCTCCTCACGCGA 60.069 52.381 15.93 0.00 0.00 5.87
2886 2964 0.039074 ACAGTTTCTCCTCACGCGAG 60.039 55.000 15.93 4.59 39.16 5.03
2894 2972 3.156334 CTCACGCGAGGGTTTTCG 58.844 61.111 15.93 0.00 43.23 3.46
2900 2978 4.445545 CGAGGGTTTTCGCTGCGC 62.446 66.667 18.65 0.00 43.18 6.09
2901 2979 4.103103 GAGGGTTTTCGCTGCGCC 62.103 66.667 18.65 12.53 43.18 6.53
2902 2980 4.643387 AGGGTTTTCGCTGCGCCT 62.643 61.111 18.65 14.61 41.58 5.52
2903 2981 3.670377 GGGTTTTCGCTGCGCCTT 61.670 61.111 18.65 0.00 0.00 4.35
2904 2982 2.329614 GGGTTTTCGCTGCGCCTTA 61.330 57.895 18.65 0.00 0.00 2.69
2905 2983 1.654023 GGGTTTTCGCTGCGCCTTAT 61.654 55.000 18.65 0.00 0.00 1.73
2906 2984 0.248094 GGTTTTCGCTGCGCCTTATC 60.248 55.000 18.65 5.32 0.00 1.75
2907 2985 0.586502 GTTTTCGCTGCGCCTTATCG 60.587 55.000 18.65 0.83 0.00 2.92
2908 2986 1.701545 TTTTCGCTGCGCCTTATCGG 61.702 55.000 18.65 0.00 0.00 4.18
2909 2987 4.585526 TCGCTGCGCCTTATCGGG 62.586 66.667 18.65 0.00 0.00 5.14
2916 2994 4.963428 GCCTTATCGGGCCCGTCG 62.963 72.222 41.57 26.40 45.92 5.12
2917 2995 3.221389 CCTTATCGGGCCCGTCGA 61.221 66.667 41.57 25.51 41.04 4.20
2918 2996 2.335369 CTTATCGGGCCCGTCGAG 59.665 66.667 41.57 30.46 40.09 4.04
2919 2997 2.440796 TTATCGGGCCCGTCGAGT 60.441 61.111 41.57 24.79 40.09 4.18
2920 2998 2.403671 CTTATCGGGCCCGTCGAGTC 62.404 65.000 41.57 2.11 40.09 3.36
2921 2999 2.898920 TTATCGGGCCCGTCGAGTCT 62.899 60.000 41.57 20.54 40.09 3.24
2926 3004 4.539881 GCCCGTCGAGTCTCGCTC 62.540 72.222 17.61 11.46 40.21 5.03
2927 3005 3.125573 CCCGTCGAGTCTCGCTCA 61.126 66.667 17.61 0.00 44.33 4.26
2928 3006 2.687805 CCCGTCGAGTCTCGCTCAA 61.688 63.158 17.61 0.00 44.33 3.02
2929 3007 1.512310 CCGTCGAGTCTCGCTCAAC 60.512 63.158 17.61 9.32 44.33 3.18
2930 3008 1.512310 CGTCGAGTCTCGCTCAACC 60.512 63.158 17.61 0.50 44.33 3.77
2931 3009 1.877367 GTCGAGTCTCGCTCAACCT 59.123 57.895 17.61 0.00 44.33 3.50
2932 3010 0.179184 GTCGAGTCTCGCTCAACCTC 60.179 60.000 17.61 0.00 44.33 3.85
2933 3011 0.321741 TCGAGTCTCGCTCAACCTCT 60.322 55.000 17.61 0.00 44.33 3.69
2934 3012 0.523966 CGAGTCTCGCTCAACCTCTT 59.476 55.000 9.74 0.00 44.33 2.85
2935 3013 1.068194 CGAGTCTCGCTCAACCTCTTT 60.068 52.381 9.74 0.00 44.33 2.52
2936 3014 2.333014 GAGTCTCGCTCAACCTCTTTG 58.667 52.381 0.00 0.00 43.58 2.77
2937 3015 1.689273 AGTCTCGCTCAACCTCTTTGT 59.311 47.619 0.00 0.00 36.49 2.83
2938 3016 2.103263 AGTCTCGCTCAACCTCTTTGTT 59.897 45.455 0.00 0.00 36.49 2.83
2939 3017 2.476997 GTCTCGCTCAACCTCTTTGTTC 59.523 50.000 0.00 0.00 36.49 3.18
2940 3018 2.365617 TCTCGCTCAACCTCTTTGTTCT 59.634 45.455 0.00 0.00 36.49 3.01
2941 3019 3.134458 CTCGCTCAACCTCTTTGTTCTT 58.866 45.455 0.00 0.00 36.49 2.52
2942 3020 4.038763 TCTCGCTCAACCTCTTTGTTCTTA 59.961 41.667 0.00 0.00 36.49 2.10
2943 3021 4.056050 TCGCTCAACCTCTTTGTTCTTAC 58.944 43.478 0.00 0.00 36.49 2.34
2944 3022 3.807622 CGCTCAACCTCTTTGTTCTTACA 59.192 43.478 0.00 0.00 36.49 2.41
2945 3023 4.084328 CGCTCAACCTCTTTGTTCTTACAG 60.084 45.833 0.00 0.00 36.49 2.74
2946 3024 5.057149 GCTCAACCTCTTTGTTCTTACAGA 58.943 41.667 0.00 0.00 36.49 3.41
2947 3025 5.703130 GCTCAACCTCTTTGTTCTTACAGAT 59.297 40.000 0.00 0.00 36.49 2.90
2948 3026 6.128418 GCTCAACCTCTTTGTTCTTACAGATC 60.128 42.308 0.00 0.00 36.49 2.75
2949 3027 5.926542 TCAACCTCTTTGTTCTTACAGATCG 59.073 40.000 0.00 0.00 36.49 3.69
2950 3028 5.470047 ACCTCTTTGTTCTTACAGATCGT 57.530 39.130 0.00 0.00 35.28 3.73
2951 3029 5.855045 ACCTCTTTGTTCTTACAGATCGTT 58.145 37.500 0.00 0.00 35.28 3.85
2952 3030 6.289064 ACCTCTTTGTTCTTACAGATCGTTT 58.711 36.000 0.00 0.00 35.28 3.60
2953 3031 6.424207 ACCTCTTTGTTCTTACAGATCGTTTC 59.576 38.462 0.00 0.00 35.28 2.78
2954 3032 6.128526 CCTCTTTGTTCTTACAGATCGTTTCC 60.129 42.308 0.00 0.00 35.28 3.13
2955 3033 5.699458 TCTTTGTTCTTACAGATCGTTTCCC 59.301 40.000 0.00 0.00 35.28 3.97
2956 3034 4.884668 TGTTCTTACAGATCGTTTCCCT 57.115 40.909 0.00 0.00 0.00 4.20
2957 3035 4.817517 TGTTCTTACAGATCGTTTCCCTC 58.182 43.478 0.00 0.00 0.00 4.30
2958 3036 4.527038 TGTTCTTACAGATCGTTTCCCTCT 59.473 41.667 0.00 0.00 0.00 3.69
2959 3037 4.985538 TCTTACAGATCGTTTCCCTCTC 57.014 45.455 0.00 0.00 0.00 3.20
2960 3038 3.377485 TCTTACAGATCGTTTCCCTCTCG 59.623 47.826 0.00 0.00 0.00 4.04
2961 3039 1.546961 ACAGATCGTTTCCCTCTCGT 58.453 50.000 0.00 0.00 0.00 4.18
2962 3040 1.473278 ACAGATCGTTTCCCTCTCGTC 59.527 52.381 0.00 0.00 0.00 4.20
2963 3041 1.104630 AGATCGTTTCCCTCTCGTCC 58.895 55.000 0.00 0.00 0.00 4.79
2964 3042 0.815734 GATCGTTTCCCTCTCGTCCA 59.184 55.000 0.00 0.00 0.00 4.02
2965 3043 1.409427 GATCGTTTCCCTCTCGTCCAT 59.591 52.381 0.00 0.00 0.00 3.41
2966 3044 2.133281 TCGTTTCCCTCTCGTCCATA 57.867 50.000 0.00 0.00 0.00 2.74
2967 3045 2.022195 TCGTTTCCCTCTCGTCCATAG 58.978 52.381 0.00 0.00 0.00 2.23
2968 3046 1.749634 CGTTTCCCTCTCGTCCATAGT 59.250 52.381 0.00 0.00 0.00 2.12
2969 3047 2.479730 CGTTTCCCTCTCGTCCATAGTG 60.480 54.545 0.00 0.00 0.00 2.74
2970 3048 1.776662 TTCCCTCTCGTCCATAGTGG 58.223 55.000 0.00 0.00 39.43 4.00
2971 3049 0.755698 TCCCTCTCGTCCATAGTGGC 60.756 60.000 0.00 0.00 37.47 5.01
2972 3050 0.757188 CCCTCTCGTCCATAGTGGCT 60.757 60.000 0.00 0.00 37.47 4.75
2973 3051 0.387202 CCTCTCGTCCATAGTGGCTG 59.613 60.000 0.00 0.00 37.47 4.85
2974 3052 0.387202 CTCTCGTCCATAGTGGCTGG 59.613 60.000 0.00 0.00 37.47 4.85
2975 3053 0.033503 TCTCGTCCATAGTGGCTGGA 60.034 55.000 0.00 0.00 40.49 3.86
2976 3054 0.824109 CTCGTCCATAGTGGCTGGAA 59.176 55.000 0.00 0.00 44.19 3.53
2977 3055 0.535335 TCGTCCATAGTGGCTGGAAC 59.465 55.000 0.00 0.00 44.19 3.62
2978 3056 0.462047 CGTCCATAGTGGCTGGAACC 60.462 60.000 0.00 0.00 44.19 3.62
2979 3057 0.107165 GTCCATAGTGGCTGGAACCC 60.107 60.000 0.00 0.00 44.19 4.11
2980 3058 0.253160 TCCATAGTGGCTGGAACCCT 60.253 55.000 0.00 0.00 39.83 4.34
2981 3059 1.009060 TCCATAGTGGCTGGAACCCTA 59.991 52.381 0.00 0.00 39.83 3.53
2982 3060 1.417890 CCATAGTGGCTGGAACCCTAG 59.582 57.143 0.00 0.00 35.70 3.02
2983 3061 1.132500 ATAGTGGCTGGAACCCTAGC 58.868 55.000 0.00 0.00 39.17 3.42
2987 3065 2.669240 GCTGGAACCCTAGCCGTT 59.331 61.111 0.00 0.00 33.89 4.44
2988 3066 1.745489 GCTGGAACCCTAGCCGTTG 60.745 63.158 0.00 0.00 33.89 4.10
2989 3067 1.745489 CTGGAACCCTAGCCGTTGC 60.745 63.158 5.75 5.75 37.95 4.17
2990 3068 2.437895 GGAACCCTAGCCGTTGCC 60.438 66.667 0.00 0.00 38.69 4.52
2991 3069 2.349755 GAACCCTAGCCGTTGCCA 59.650 61.111 0.00 0.00 38.69 4.92
2992 3070 1.745489 GAACCCTAGCCGTTGCCAG 60.745 63.158 0.00 0.00 38.69 4.85
2993 3071 3.268103 AACCCTAGCCGTTGCCAGG 62.268 63.158 0.00 0.00 45.01 4.45
2996 3074 3.298958 CTAGCCGTTGCCAGGAGA 58.701 61.111 0.00 0.00 38.69 3.71
2997 3075 1.142748 CTAGCCGTTGCCAGGAGAG 59.857 63.158 0.00 0.00 38.69 3.20
2998 3076 2.303549 CTAGCCGTTGCCAGGAGAGG 62.304 65.000 0.00 0.00 38.69 3.69
2999 3077 4.021925 GCCGTTGCCAGGAGAGGT 62.022 66.667 0.00 0.00 0.00 3.85
3000 3078 2.266055 CCGTTGCCAGGAGAGGTC 59.734 66.667 0.00 0.00 0.00 3.85
3001 3079 2.583441 CCGTTGCCAGGAGAGGTCA 61.583 63.158 0.00 0.00 0.00 4.02
3002 3080 1.371183 CGTTGCCAGGAGAGGTCAA 59.629 57.895 0.00 0.00 0.00 3.18
3003 3081 0.036010 CGTTGCCAGGAGAGGTCAAT 60.036 55.000 0.00 0.00 31.03 2.57
3004 3082 1.743996 GTTGCCAGGAGAGGTCAATC 58.256 55.000 0.00 0.00 31.03 2.67
3005 3083 1.280421 GTTGCCAGGAGAGGTCAATCT 59.720 52.381 0.00 0.00 31.03 2.40
3006 3084 1.661463 TGCCAGGAGAGGTCAATCTT 58.339 50.000 0.00 0.00 0.00 2.40
3007 3085 1.556911 TGCCAGGAGAGGTCAATCTTC 59.443 52.381 0.00 0.00 0.00 2.87
3008 3086 1.836802 GCCAGGAGAGGTCAATCTTCT 59.163 52.381 0.00 0.00 35.37 2.85
3009 3087 3.034635 GCCAGGAGAGGTCAATCTTCTA 58.965 50.000 0.00 0.00 32.45 2.10
3010 3088 3.069443 GCCAGGAGAGGTCAATCTTCTAG 59.931 52.174 0.00 0.00 32.45 2.43
3011 3089 3.069443 CCAGGAGAGGTCAATCTTCTAGC 59.931 52.174 0.00 0.00 32.45 3.42
3012 3090 2.955660 AGGAGAGGTCAATCTTCTAGCG 59.044 50.000 0.00 0.00 33.08 4.26
3013 3091 2.544903 GGAGAGGTCAATCTTCTAGCGC 60.545 54.545 0.00 0.00 32.54 5.92
3014 3092 1.410882 AGAGGTCAATCTTCTAGCGCC 59.589 52.381 2.29 0.00 30.55 6.53
3015 3093 0.103208 AGGTCAATCTTCTAGCGCCG 59.897 55.000 2.29 0.00 0.00 6.46
3016 3094 0.179108 GGTCAATCTTCTAGCGCCGT 60.179 55.000 2.29 0.00 0.00 5.68
3017 3095 1.201343 GTCAATCTTCTAGCGCCGTC 58.799 55.000 2.29 0.00 0.00 4.79
3018 3096 0.102481 TCAATCTTCTAGCGCCGTCC 59.898 55.000 2.29 0.00 0.00 4.79
3019 3097 0.103208 CAATCTTCTAGCGCCGTCCT 59.897 55.000 2.29 0.00 0.00 3.85
3020 3098 0.386113 AATCTTCTAGCGCCGTCCTC 59.614 55.000 2.29 0.00 0.00 3.71
3021 3099 1.457009 ATCTTCTAGCGCCGTCCTCC 61.457 60.000 2.29 0.00 0.00 4.30
3022 3100 3.471244 CTTCTAGCGCCGTCCTCCG 62.471 68.421 2.29 0.00 0.00 4.63
3033 3111 4.816984 TCCTCCGCGACTCCCCTC 62.817 72.222 8.23 0.00 0.00 4.30
3048 3126 3.691342 CTCCGCCGGTGACCTCAA 61.691 66.667 18.79 0.00 0.00 3.02
3049 3127 3.000819 TCCGCCGGTGACCTCAAT 61.001 61.111 18.79 0.00 0.00 2.57
3050 3128 2.511600 CCGCCGGTGACCTCAATC 60.512 66.667 18.79 0.00 0.00 2.67
3051 3129 2.885644 CGCCGGTGACCTCAATCG 60.886 66.667 10.20 0.00 0.00 3.34
3052 3130 2.264794 GCCGGTGACCTCAATCGT 59.735 61.111 1.90 0.00 0.00 3.73
3053 3131 1.810030 GCCGGTGACCTCAATCGTC 60.810 63.158 1.90 0.00 0.00 4.20
3054 3132 1.589630 CCGGTGACCTCAATCGTCA 59.410 57.895 0.00 0.00 37.91 4.35
3055 3133 0.458543 CCGGTGACCTCAATCGTCAG 60.459 60.000 0.00 0.00 40.79 3.51
3056 3134 0.243907 CGGTGACCTCAATCGTCAGT 59.756 55.000 0.00 0.00 40.79 3.41
3057 3135 1.714794 GGTGACCTCAATCGTCAGTG 58.285 55.000 0.00 0.00 40.79 3.66
3058 3136 1.673033 GGTGACCTCAATCGTCAGTGG 60.673 57.143 0.00 0.00 40.79 4.00
3059 3137 1.000955 GTGACCTCAATCGTCAGTGGT 59.999 52.381 0.00 0.00 40.79 4.16
3060 3138 1.000843 TGACCTCAATCGTCAGTGGTG 59.999 52.381 0.00 0.00 35.35 4.17
3061 3139 1.272490 GACCTCAATCGTCAGTGGTGA 59.728 52.381 0.00 0.00 32.24 4.02
3062 3140 1.273606 ACCTCAATCGTCAGTGGTGAG 59.726 52.381 0.00 0.00 36.33 3.51
3063 3141 1.404717 CCTCAATCGTCAGTGGTGAGG 60.405 57.143 3.76 3.76 46.89 3.86
3064 3142 0.608130 TCAATCGTCAGTGGTGAGGG 59.392 55.000 0.00 0.00 38.80 4.30
3065 3143 0.391661 CAATCGTCAGTGGTGAGGGG 60.392 60.000 0.00 0.00 38.80 4.79
3066 3144 1.553690 AATCGTCAGTGGTGAGGGGG 61.554 60.000 0.00 0.00 38.80 5.40
3080 3158 2.186125 GGGGGTCGTCGGATCAAC 59.814 66.667 0.00 0.00 0.00 3.18
3081 3159 2.652095 GGGGGTCGTCGGATCAACA 61.652 63.158 0.00 0.00 0.00 3.33
3082 3160 1.447314 GGGGTCGTCGGATCAACAC 60.447 63.158 0.00 0.00 0.00 3.32
3083 3161 1.804326 GGGTCGTCGGATCAACACG 60.804 63.158 0.00 0.00 34.78 4.49
3084 3162 2.442188 GGTCGTCGGATCAACACGC 61.442 63.158 0.00 0.00 33.46 5.34
3085 3163 2.503158 TCGTCGGATCAACACGCG 60.503 61.111 3.53 3.53 33.46 6.01
3086 3164 2.803670 CGTCGGATCAACACGCGT 60.804 61.111 5.58 5.58 0.00 6.01
3087 3165 2.769617 GTCGGATCAACACGCGTG 59.230 61.111 35.99 35.99 0.00 5.34
3088 3166 2.431771 TCGGATCAACACGCGTGG 60.432 61.111 39.21 24.50 34.19 4.94
3089 3167 3.487202 CGGATCAACACGCGTGGG 61.487 66.667 39.21 30.33 34.19 4.61
3090 3168 2.358247 GGATCAACACGCGTGGGT 60.358 61.111 39.21 25.72 34.19 4.51
3091 3169 2.388232 GGATCAACACGCGTGGGTC 61.388 63.158 39.21 27.72 34.19 4.46
3092 3170 1.666553 GATCAACACGCGTGGGTCA 60.667 57.895 39.21 22.08 34.19 4.02
3093 3171 1.225376 GATCAACACGCGTGGGTCAA 61.225 55.000 39.21 21.52 34.19 3.18
3094 3172 0.605319 ATCAACACGCGTGGGTCAAT 60.605 50.000 39.21 22.65 34.19 2.57
3095 3173 0.816018 TCAACACGCGTGGGTCAATT 60.816 50.000 39.21 22.51 34.19 2.32
3096 3174 0.030101 CAACACGCGTGGGTCAATTT 59.970 50.000 39.21 21.80 34.19 1.82
3097 3175 0.741915 AACACGCGTGGGTCAATTTT 59.258 45.000 39.21 21.07 34.19 1.82
3098 3176 1.595466 ACACGCGTGGGTCAATTTTA 58.405 45.000 39.21 0.00 34.19 1.52
3099 3177 1.264826 ACACGCGTGGGTCAATTTTAC 59.735 47.619 39.21 0.00 34.19 2.01
3100 3178 1.533731 CACGCGTGGGTCAATTTTACT 59.466 47.619 31.15 0.00 0.00 2.24
3101 3179 1.802365 ACGCGTGGGTCAATTTTACTC 59.198 47.619 12.93 0.00 0.00 2.59
3102 3180 1.129811 CGCGTGGGTCAATTTTACTCC 59.870 52.381 0.00 0.00 0.00 3.85
3103 3181 1.471287 GCGTGGGTCAATTTTACTCCC 59.529 52.381 0.00 0.00 38.68 4.30
3104 3182 2.878526 GCGTGGGTCAATTTTACTCCCT 60.879 50.000 0.00 0.00 38.95 4.20
3105 3183 3.418047 CGTGGGTCAATTTTACTCCCTT 58.582 45.455 0.00 0.00 38.95 3.95
3106 3184 3.190535 CGTGGGTCAATTTTACTCCCTTG 59.809 47.826 0.00 0.00 38.95 3.61
3107 3185 4.149598 GTGGGTCAATTTTACTCCCTTGT 58.850 43.478 0.00 0.00 38.95 3.16
3108 3186 5.318630 GTGGGTCAATTTTACTCCCTTGTA 58.681 41.667 0.00 0.00 38.95 2.41
3109 3187 5.414765 GTGGGTCAATTTTACTCCCTTGTAG 59.585 44.000 0.00 0.00 38.95 2.74
3110 3188 5.073965 TGGGTCAATTTTACTCCCTTGTAGT 59.926 40.000 0.00 0.00 38.95 2.73
3111 3189 5.646793 GGGTCAATTTTACTCCCTTGTAGTC 59.353 44.000 0.00 0.00 35.63 2.59
3112 3190 6.473758 GGTCAATTTTACTCCCTTGTAGTCT 58.526 40.000 0.00 0.00 0.00 3.24
3113 3191 7.310858 GGGTCAATTTTACTCCCTTGTAGTCTA 60.311 40.741 0.00 0.00 35.63 2.59
3114 3192 8.098912 GGTCAATTTTACTCCCTTGTAGTCTAA 58.901 37.037 0.00 0.00 0.00 2.10
3115 3193 9.152595 GTCAATTTTACTCCCTTGTAGTCTAAG 57.847 37.037 0.00 0.00 0.00 2.18
3116 3194 8.877195 TCAATTTTACTCCCTTGTAGTCTAAGT 58.123 33.333 0.00 0.00 0.00 2.24
3117 3195 9.503399 CAATTTTACTCCCTTGTAGTCTAAGTT 57.497 33.333 0.00 0.00 0.00 2.66
3120 3198 9.910267 TTTTACTCCCTTGTAGTCTAAGTTTTT 57.090 29.630 0.00 0.00 0.00 1.94
3123 3201 8.488308 ACTCCCTTGTAGTCTAAGTTTTTAGA 57.512 34.615 0.00 0.00 42.25 2.10
3135 3213 8.516811 TCTAAGTTTTTAGACTGTTCATCGTC 57.483 34.615 0.00 0.00 40.20 4.20
3136 3214 8.358148 TCTAAGTTTTTAGACTGTTCATCGTCT 58.642 33.333 0.00 0.00 40.20 4.18
3137 3215 7.787725 AAGTTTTTAGACTGTTCATCGTCTT 57.212 32.000 0.00 0.00 40.67 3.01
3138 3216 7.178712 AGTTTTTAGACTGTTCATCGTCTTG 57.821 36.000 0.00 0.00 40.67 3.02
3139 3217 6.202954 AGTTTTTAGACTGTTCATCGTCTTGG 59.797 38.462 0.00 0.00 40.67 3.61
3140 3218 2.086054 AGACTGTTCATCGTCTTGGC 57.914 50.000 0.00 0.00 37.19 4.52
3141 3219 1.344438 AGACTGTTCATCGTCTTGGCA 59.656 47.619 0.00 0.00 37.19 4.92
3142 3220 2.027745 AGACTGTTCATCGTCTTGGCAT 60.028 45.455 0.00 0.00 37.19 4.40
3143 3221 2.349886 GACTGTTCATCGTCTTGGCATC 59.650 50.000 0.00 0.00 0.00 3.91
3144 3222 1.325640 CTGTTCATCGTCTTGGCATCG 59.674 52.381 0.00 0.00 0.00 3.84
3145 3223 0.652592 GTTCATCGTCTTGGCATCGG 59.347 55.000 0.00 0.00 0.00 4.18
3146 3224 1.089481 TTCATCGTCTTGGCATCGGC 61.089 55.000 0.00 0.00 40.13 5.54
3147 3225 2.586079 ATCGTCTTGGCATCGGCG 60.586 61.111 0.00 0.00 42.47 6.46
3148 3226 4.812476 TCGTCTTGGCATCGGCGG 62.812 66.667 7.21 0.00 42.47 6.13
3158 3236 2.356313 ATCGGCGGCGATGATGAC 60.356 61.111 40.95 0.00 0.00 3.06
3159 3237 3.865929 ATCGGCGGCGATGATGACC 62.866 63.158 40.95 1.82 0.00 4.02
3160 3238 4.889856 CGGCGGCGATGATGACCA 62.890 66.667 29.19 0.00 0.00 4.02
3161 3239 3.272334 GGCGGCGATGATGACCAC 61.272 66.667 12.98 0.00 0.00 4.16
3162 3240 2.511373 GCGGCGATGATGACCACA 60.511 61.111 12.98 0.00 0.00 4.17
3163 3241 2.813179 GCGGCGATGATGACCACAC 61.813 63.158 12.98 0.00 0.00 3.82
3164 3242 1.153568 CGGCGATGATGACCACACT 60.154 57.895 0.00 0.00 0.00 3.55
3165 3243 1.423721 CGGCGATGATGACCACACTG 61.424 60.000 0.00 0.00 0.00 3.66
3166 3244 0.108186 GGCGATGATGACCACACTGA 60.108 55.000 0.00 0.00 0.00 3.41
3167 3245 1.675714 GGCGATGATGACCACACTGAA 60.676 52.381 0.00 0.00 0.00 3.02
3168 3246 2.283298 GCGATGATGACCACACTGAAT 58.717 47.619 0.00 0.00 0.00 2.57
3169 3247 3.457234 GCGATGATGACCACACTGAATA 58.543 45.455 0.00 0.00 0.00 1.75
3170 3248 3.871006 GCGATGATGACCACACTGAATAA 59.129 43.478 0.00 0.00 0.00 1.40
3171 3249 4.332543 GCGATGATGACCACACTGAATAAA 59.667 41.667 0.00 0.00 0.00 1.40
3172 3250 5.503031 GCGATGATGACCACACTGAATAAAG 60.503 44.000 0.00 0.00 0.00 1.85
3173 3251 5.812127 CGATGATGACCACACTGAATAAAGA 59.188 40.000 0.00 0.00 0.00 2.52
3174 3252 6.481313 CGATGATGACCACACTGAATAAAGAT 59.519 38.462 0.00 0.00 0.00 2.40
3175 3253 7.011763 CGATGATGACCACACTGAATAAAGATT 59.988 37.037 0.00 0.00 0.00 2.40
3176 3254 7.615582 TGATGACCACACTGAATAAAGATTC 57.384 36.000 0.00 0.00 41.72 2.52
3177 3255 7.397221 TGATGACCACACTGAATAAAGATTCT 58.603 34.615 0.00 0.00 41.87 2.40
3178 3256 7.884877 TGATGACCACACTGAATAAAGATTCTT 59.115 33.333 0.00 0.00 41.87 2.52
3179 3257 7.672983 TGACCACACTGAATAAAGATTCTTC 57.327 36.000 0.00 0.00 41.87 2.87
3180 3258 6.368791 TGACCACACTGAATAAAGATTCTTCG 59.631 38.462 0.00 0.00 41.87 3.79
3181 3259 5.643777 ACCACACTGAATAAAGATTCTTCGG 59.356 40.000 0.00 0.00 41.87 4.30
3182 3260 5.874810 CCACACTGAATAAAGATTCTTCGGA 59.125 40.000 0.00 0.00 41.87 4.55
3183 3261 6.540189 CCACACTGAATAAAGATTCTTCGGAT 59.460 38.462 0.00 0.00 41.87 4.18
3184 3262 7.066284 CCACACTGAATAAAGATTCTTCGGATT 59.934 37.037 0.00 0.80 41.87 3.01
3185 3263 8.119226 CACACTGAATAAAGATTCTTCGGATTC 58.881 37.037 15.26 15.26 41.87 2.52
3186 3264 8.043710 ACACTGAATAAAGATTCTTCGGATTCT 58.956 33.333 19.21 7.06 41.87 2.40
3187 3265 8.887717 CACTGAATAAAGATTCTTCGGATTCTT 58.112 33.333 19.21 10.53 42.74 2.52
3188 3266 9.103861 ACTGAATAAAGATTCTTCGGATTCTTC 57.896 33.333 19.21 7.60 41.16 2.87
3189 3267 9.323985 CTGAATAAAGATTCTTCGGATTCTTCT 57.676 33.333 19.21 0.30 41.16 2.85
3190 3268 9.319143 TGAATAAAGATTCTTCGGATTCTTCTC 57.681 33.333 19.21 5.02 41.16 2.87
3191 3269 9.541143 GAATAAAGATTCTTCGGATTCTTCTCT 57.459 33.333 15.04 0.00 41.16 3.10
3192 3270 8.885494 ATAAAGATTCTTCGGATTCTTCTCTG 57.115 34.615 0.00 0.00 41.16 3.35
3193 3271 6.537453 AAGATTCTTCGGATTCTTCTCTGA 57.463 37.500 0.00 0.00 39.17 3.27
3194 3272 5.901552 AGATTCTTCGGATTCTTCTCTGAC 58.098 41.667 0.00 0.00 32.69 3.51
3195 3273 3.766676 TCTTCGGATTCTTCTCTGACG 57.233 47.619 0.00 0.00 30.27 4.35
3196 3274 3.344515 TCTTCGGATTCTTCTCTGACGA 58.655 45.455 0.00 0.00 30.27 4.20
3197 3275 3.375610 TCTTCGGATTCTTCTCTGACGAG 59.624 47.826 0.00 0.00 38.67 4.18
3198 3276 2.017782 TCGGATTCTTCTCTGACGAGG 58.982 52.381 0.00 0.00 37.86 4.63
3199 3277 1.535015 CGGATTCTTCTCTGACGAGGC 60.535 57.143 0.00 0.00 37.86 4.70
3200 3278 1.202475 GGATTCTTCTCTGACGAGGCC 60.202 57.143 0.00 0.00 37.86 5.19
3201 3279 1.478510 GATTCTTCTCTGACGAGGCCA 59.521 52.381 5.01 0.00 37.86 5.36
3202 3280 1.561643 TTCTTCTCTGACGAGGCCAT 58.438 50.000 5.01 0.00 37.86 4.40
3203 3281 1.107114 TCTTCTCTGACGAGGCCATC 58.893 55.000 5.01 0.00 37.86 3.51
3204 3282 0.820226 CTTCTCTGACGAGGCCATCA 59.180 55.000 5.01 4.69 37.86 3.07
3205 3283 0.820226 TTCTCTGACGAGGCCATCAG 59.180 55.000 20.30 20.30 43.16 2.90
3206 3284 0.323816 TCTCTGACGAGGCCATCAGT 60.324 55.000 23.48 10.88 42.52 3.41
3207 3285 0.102120 CTCTGACGAGGCCATCAGTC 59.898 60.000 23.48 17.77 42.52 3.51
3208 3286 1.142748 CTGACGAGGCCATCAGTCC 59.857 63.158 18.80 4.03 38.03 3.85
3209 3287 1.305297 TGACGAGGCCATCAGTCCT 60.305 57.895 5.01 0.00 33.35 3.85
3210 3288 0.033503 TGACGAGGCCATCAGTCCTA 60.034 55.000 5.01 0.00 33.35 2.94
3211 3289 1.333177 GACGAGGCCATCAGTCCTAT 58.667 55.000 5.01 0.00 31.71 2.57
3212 3290 1.000283 GACGAGGCCATCAGTCCTATG 60.000 57.143 5.01 0.00 31.71 2.23
3213 3291 0.319728 CGAGGCCATCAGTCCTATGG 59.680 60.000 5.01 0.00 45.68 2.74
3214 3292 1.428869 GAGGCCATCAGTCCTATGGT 58.571 55.000 5.01 0.00 44.87 3.55
3215 3293 1.771255 GAGGCCATCAGTCCTATGGTT 59.229 52.381 5.01 0.00 44.87 3.67
3216 3294 1.492176 AGGCCATCAGTCCTATGGTTG 59.508 52.381 5.01 0.00 44.87 3.77
3217 3295 1.477558 GGCCATCAGTCCTATGGTTGG 60.478 57.143 0.00 0.00 44.87 3.77
3218 3296 1.477558 GCCATCAGTCCTATGGTTGGG 60.478 57.143 4.18 0.00 44.87 4.12
3219 3297 1.143684 CCATCAGTCCTATGGTTGGGG 59.856 57.143 0.00 0.00 39.30 4.96
3220 3298 2.126882 CATCAGTCCTATGGTTGGGGA 58.873 52.381 0.00 0.00 0.00 4.81
3221 3299 2.587060 TCAGTCCTATGGTTGGGGAT 57.413 50.000 0.00 0.00 0.00 3.85
3222 3300 2.126882 TCAGTCCTATGGTTGGGGATG 58.873 52.381 0.00 0.00 0.00 3.51
3223 3301 2.126882 CAGTCCTATGGTTGGGGATGA 58.873 52.381 0.00 0.00 0.00 2.92
3224 3302 2.509548 CAGTCCTATGGTTGGGGATGAA 59.490 50.000 0.00 0.00 0.00 2.57
3225 3303 3.139025 CAGTCCTATGGTTGGGGATGAAT 59.861 47.826 0.00 0.00 0.00 2.57
3226 3304 3.793827 AGTCCTATGGTTGGGGATGAATT 59.206 43.478 0.00 0.00 0.00 2.17
3227 3305 4.232820 AGTCCTATGGTTGGGGATGAATTT 59.767 41.667 0.00 0.00 0.00 1.82
3228 3306 4.342092 GTCCTATGGTTGGGGATGAATTTG 59.658 45.833 0.00 0.00 0.00 2.32
3229 3307 3.642848 CCTATGGTTGGGGATGAATTTGG 59.357 47.826 0.00 0.00 0.00 3.28
3230 3308 3.488355 ATGGTTGGGGATGAATTTGGA 57.512 42.857 0.00 0.00 0.00 3.53
3231 3309 3.266477 TGGTTGGGGATGAATTTGGAA 57.734 42.857 0.00 0.00 0.00 3.53
3232 3310 3.591789 TGGTTGGGGATGAATTTGGAAA 58.408 40.909 0.00 0.00 0.00 3.13
3233 3311 3.326297 TGGTTGGGGATGAATTTGGAAAC 59.674 43.478 0.00 0.00 0.00 2.78
3234 3312 3.307410 GGTTGGGGATGAATTTGGAAACC 60.307 47.826 0.00 0.00 0.00 3.27
3235 3313 3.266477 TGGGGATGAATTTGGAAACCA 57.734 42.857 0.00 0.00 0.00 3.67
3236 3314 3.172339 TGGGGATGAATTTGGAAACCAG 58.828 45.455 0.00 0.00 33.81 4.00
3237 3315 3.173151 GGGGATGAATTTGGAAACCAGT 58.827 45.455 0.00 0.00 33.81 4.00
3238 3316 3.195610 GGGGATGAATTTGGAAACCAGTC 59.804 47.826 0.00 0.00 33.81 3.51
3239 3317 4.089361 GGGATGAATTTGGAAACCAGTCT 58.911 43.478 0.00 0.00 33.81 3.24
3240 3318 5.261216 GGGATGAATTTGGAAACCAGTCTA 58.739 41.667 0.00 0.00 33.81 2.59
3241 3319 5.893824 GGGATGAATTTGGAAACCAGTCTAT 59.106 40.000 0.00 0.00 33.81 1.98
3242 3320 6.381133 GGGATGAATTTGGAAACCAGTCTATT 59.619 38.462 0.00 0.00 33.81 1.73
3243 3321 7.416777 GGGATGAATTTGGAAACCAGTCTATTC 60.417 40.741 0.00 0.00 33.81 1.75
3244 3322 7.122650 GGATGAATTTGGAAACCAGTCTATTCA 59.877 37.037 14.96 14.96 35.54 2.57
3245 3323 7.831691 TGAATTTGGAAACCAGTCTATTCAA 57.168 32.000 0.00 0.00 33.81 2.69
3246 3324 7.885297 TGAATTTGGAAACCAGTCTATTCAAG 58.115 34.615 0.00 0.00 33.81 3.02
3247 3325 5.705609 TTTGGAAACCAGTCTATTCAAGC 57.294 39.130 0.00 0.00 33.81 4.01
3248 3326 4.365514 TGGAAACCAGTCTATTCAAGCA 57.634 40.909 0.00 0.00 0.00 3.91
3249 3327 4.724399 TGGAAACCAGTCTATTCAAGCAA 58.276 39.130 0.00 0.00 0.00 3.91
3250 3328 5.136828 TGGAAACCAGTCTATTCAAGCAAA 58.863 37.500 0.00 0.00 0.00 3.68
3251 3329 5.241506 TGGAAACCAGTCTATTCAAGCAAAG 59.758 40.000 0.00 0.00 0.00 2.77
3252 3330 5.473504 GGAAACCAGTCTATTCAAGCAAAGA 59.526 40.000 0.00 0.00 0.00 2.52
3253 3331 6.151817 GGAAACCAGTCTATTCAAGCAAAGAT 59.848 38.462 0.00 0.00 0.00 2.40
3254 3332 6.506500 AACCAGTCTATTCAAGCAAAGATG 57.493 37.500 0.00 0.00 0.00 2.90
3255 3333 5.809001 ACCAGTCTATTCAAGCAAAGATGA 58.191 37.500 0.00 0.00 0.00 2.92
3256 3334 5.645497 ACCAGTCTATTCAAGCAAAGATGAC 59.355 40.000 0.00 0.00 0.00 3.06
3257 3335 5.645067 CCAGTCTATTCAAGCAAAGATGACA 59.355 40.000 0.00 0.00 0.00 3.58
3258 3336 6.318144 CCAGTCTATTCAAGCAAAGATGACAT 59.682 38.462 0.00 0.00 0.00 3.06
3259 3337 7.187480 CAGTCTATTCAAGCAAAGATGACATG 58.813 38.462 0.00 0.00 0.00 3.21
3260 3338 6.318144 AGTCTATTCAAGCAAAGATGACATGG 59.682 38.462 0.00 0.00 0.00 3.66
3261 3339 3.581024 TTCAAGCAAAGATGACATGGC 57.419 42.857 0.00 0.00 0.00 4.40
3262 3340 1.469703 TCAAGCAAAGATGACATGGCG 59.530 47.619 0.00 0.00 0.00 5.69
3263 3341 0.813184 AAGCAAAGATGACATGGCGG 59.187 50.000 0.00 0.00 0.00 6.13
3264 3342 1.226773 GCAAAGATGACATGGCGGC 60.227 57.895 0.00 0.00 0.00 6.53
3265 3343 1.063006 CAAAGATGACATGGCGGCG 59.937 57.895 0.51 0.51 0.00 6.46
3266 3344 1.078497 AAAGATGACATGGCGGCGA 60.078 52.632 12.98 0.00 0.00 5.54
3267 3345 1.369091 AAAGATGACATGGCGGCGAC 61.369 55.000 12.98 9.31 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 2.171209 GAATTTGCCCCCTGTGTGCC 62.171 60.000 0.00 0.00 0.00 5.01
18 19 1.341080 CTTGAATTTGCCCCCTGTGT 58.659 50.000 0.00 0.00 0.00 3.72
24 25 3.572255 TGAACTGTACTTGAATTTGCCCC 59.428 43.478 0.00 0.00 0.00 5.80
40 41 7.397892 TGGAGAAAGTCTATAGTCTGAACTG 57.602 40.000 0.00 0.00 36.92 3.16
55 56 8.870075 AAGAAGTATAAATGCTTGGAGAAAGT 57.130 30.769 0.00 0.00 38.25 2.66
87 88 0.249911 CTTCGCTATAGTGGGCCCAC 60.250 60.000 42.82 42.82 46.50 4.61
103 109 1.379176 GCTTCCCTCCCAAGCCTTC 60.379 63.158 0.00 0.00 40.45 3.46
141 148 4.584327 TTGCCTCCTAAGCAAGAAAAAC 57.416 40.909 0.00 0.00 44.95 2.43
170 177 7.380870 GTCACATATACTACAGTGCTGAAGATG 59.619 40.741 6.17 4.55 32.25 2.90
206 213 3.941483 CAGGTCGCTGAACCAGATTAAAT 59.059 43.478 0.00 0.00 42.12 1.40
241 248 4.526970 CACACCTTATGGCCTATCAACTT 58.473 43.478 3.32 0.00 36.63 2.66
272 279 2.359850 TCCGCCACTGCCAATCAC 60.360 61.111 0.00 0.00 0.00 3.06
279 286 3.316573 AACCTAGCTCCGCCACTGC 62.317 63.158 0.00 0.00 0.00 4.40
294 301 1.032114 CCCGCCCAGAGAAATGAACC 61.032 60.000 0.00 0.00 0.00 3.62
295 302 1.657751 GCCCGCCCAGAGAAATGAAC 61.658 60.000 0.00 0.00 0.00 3.18
321 328 3.527507 TGGTATTTGTTAACCTGCCCA 57.472 42.857 2.48 0.37 36.67 5.36
370 377 0.250038 TTCAGTCAAGAGCAGCGCTT 60.250 50.000 7.50 5.42 39.88 4.68
442 449 7.148086 GCAAAATTAGATACCAATCACCAGTGA 60.148 37.037 2.42 2.42 44.59 3.41
479 486 5.636903 ATAATGCAGGTAGCCTATATGGG 57.363 43.478 0.00 0.00 44.83 4.00
510 533 6.903516 AGATTCATTCCAAGTCATATGGTCA 58.096 36.000 2.13 0.00 39.09 4.02
525 548 6.638610 TGAGGAGTCAAGAGAAGATTCATTC 58.361 40.000 0.00 0.00 0.00 2.67
612 635 8.814038 AGCAGGACATCTAAAAATAGTCAATT 57.186 30.769 0.00 0.00 0.00 2.32
623 647 5.359860 TGAGTAATCGAGCAGGACATCTAAA 59.640 40.000 0.00 0.00 0.00 1.85
656 680 5.010922 CCAACCCAAGAATGAAACAGATCAA 59.989 40.000 0.00 0.00 32.06 2.57
668 692 2.112998 CATGCCATCCAACCCAAGAAT 58.887 47.619 0.00 0.00 0.00 2.40
671 695 0.324552 TCCATGCCATCCAACCCAAG 60.325 55.000 0.00 0.00 0.00 3.61
714 738 5.702670 CCTCATACTCTCAAGCTTGAACAAA 59.297 40.000 28.16 15.40 36.64 2.83
731 755 9.036980 AGAGATTATATAACCACACCCTCATAC 57.963 37.037 0.00 0.00 0.00 2.39
770 795 1.857965 AGACTACAGCATGCTCTGGA 58.142 50.000 19.68 4.14 42.53 3.86
788 813 9.139174 GAAGAGAAAGAGATTCAGACAAAGTAG 57.861 37.037 0.00 0.00 40.72 2.57
887 918 9.357652 CAGGTCATTATTTACAGGACAAAAATG 57.642 33.333 0.00 0.00 0.00 2.32
905 936 4.040952 AGCAACTACTGAGTTCAGGTCATT 59.959 41.667 13.30 0.46 44.39 2.57
938 969 6.533730 TCAATCAAAGTACAAGTGGACATCT 58.466 36.000 0.00 0.00 0.00 2.90
1044 1075 4.156739 GGTTGAGGATAAACTTTCTGGCTG 59.843 45.833 0.00 0.00 0.00 4.85
1248 1279 6.434340 TCTCTCTGTAAGTATGCTTGAGTTCA 59.566 38.462 6.28 0.00 36.22 3.18
1420 1451 2.543012 CCTCATCGATTTGCTGCTGTAG 59.457 50.000 0.00 0.00 0.00 2.74
1551 1582 7.065803 TCAGTAGCAGATGTAAATAAACTTGGC 59.934 37.037 0.00 0.00 0.00 4.52
1573 1604 8.922931 TGTATTGATTGGTATGCATTATCAGT 57.077 30.769 3.54 8.85 0.00 3.41
1608 1639 3.949754 TCATCATGTTGATCAAGGGCTTC 59.050 43.478 8.80 0.00 34.28 3.86
1731 1762 3.030291 ACCACTGAACATTCTTTGGCAA 58.970 40.909 0.00 0.00 34.86 4.52
1797 1828 2.751806 GTGGAAGAAAGCCTCATTGGAG 59.248 50.000 0.00 0.00 41.02 3.86
1878 1909 2.357637 CCTGCAGAACTTTCCGAAAACA 59.642 45.455 17.39 0.00 0.00 2.83
1899 1930 4.215399 TGCACAAGTAACAGGTATTTGCTC 59.785 41.667 0.67 0.00 33.75 4.26
2259 2290 0.657312 TGCAACACTTTCAGTCAGCG 59.343 50.000 0.00 0.00 0.00 5.18
2271 2302 2.355756 TCTTCTCAAGCAACTGCAACAC 59.644 45.455 4.22 0.00 45.16 3.32
2300 2332 3.826524 TGAGCCCACATGAACTAAAACA 58.173 40.909 0.00 0.00 0.00 2.83
2311 2343 2.806434 TGCAACTAAATGAGCCCACAT 58.194 42.857 0.00 0.00 0.00 3.21
2352 2384 3.799963 TCACACACGAAACAGACATACAC 59.200 43.478 0.00 0.00 0.00 2.90
2356 2388 3.876914 ACATTCACACACGAAACAGACAT 59.123 39.130 0.00 0.00 0.00 3.06
2364 2396 2.032117 GCATCACACATTCACACACGAA 60.032 45.455 0.00 0.00 0.00 3.85
2371 2403 5.550232 TTCATGTAGCATCACACATTCAC 57.450 39.130 0.00 0.00 33.12 3.18
2372 2404 6.430616 TCTTTTCATGTAGCATCACACATTCA 59.569 34.615 0.00 0.00 33.12 2.57
2373 2405 6.845302 TCTTTTCATGTAGCATCACACATTC 58.155 36.000 0.00 0.00 33.12 2.67
2374 2406 6.822667 TCTTTTCATGTAGCATCACACATT 57.177 33.333 0.00 0.00 33.12 2.71
2375 2407 6.376299 ACATCTTTTCATGTAGCATCACACAT 59.624 34.615 0.00 0.00 35.10 3.21
2376 2408 5.706833 ACATCTTTTCATGTAGCATCACACA 59.293 36.000 0.00 0.00 35.10 3.72
2377 2409 6.187125 ACATCTTTTCATGTAGCATCACAC 57.813 37.500 0.00 0.00 35.10 3.82
2378 2410 6.822667 AACATCTTTTCATGTAGCATCACA 57.177 33.333 0.00 0.00 35.87 3.58
2395 2427 6.604396 TGCCACATTTCATCTGAATAACATCT 59.396 34.615 0.00 0.00 33.54 2.90
2419 2451 1.193203 CACAAACGTGCTGCTAGACTG 59.807 52.381 0.00 0.00 0.00 3.51
2429 2463 2.096819 TGAAGGTCTTTCACAAACGTGC 59.903 45.455 0.00 0.00 40.82 5.34
2493 2527 6.539649 AATCAAACCAACGATATATCACGG 57.460 37.500 13.11 11.06 0.00 4.94
2500 2534 6.773976 ACATCCAAATCAAACCAACGATAT 57.226 33.333 0.00 0.00 0.00 1.63
2503 2537 4.615949 CAACATCCAAATCAAACCAACGA 58.384 39.130 0.00 0.00 0.00 3.85
2504 2538 3.184178 GCAACATCCAAATCAAACCAACG 59.816 43.478 0.00 0.00 0.00 4.10
2561 2629 7.390718 GTCCCAATATAAGTGACTCAACTTTGT 59.609 37.037 0.00 0.00 40.77 2.83
2562 2630 7.413000 CGTCCCAATATAAGTGACTCAACTTTG 60.413 40.741 0.00 0.00 40.77 2.77
2564 2632 6.106673 CGTCCCAATATAAGTGACTCAACTT 58.893 40.000 0.00 0.00 42.89 2.66
2565 2633 5.395324 CCGTCCCAATATAAGTGACTCAACT 60.395 44.000 0.00 0.00 0.00 3.16
2566 2634 4.809426 CCGTCCCAATATAAGTGACTCAAC 59.191 45.833 0.00 0.00 0.00 3.18
2567 2635 4.141801 CCCGTCCCAATATAAGTGACTCAA 60.142 45.833 0.00 0.00 0.00 3.02
2568 2636 3.386726 CCCGTCCCAATATAAGTGACTCA 59.613 47.826 0.00 0.00 0.00 3.41
2569 2637 3.244112 CCCCGTCCCAATATAAGTGACTC 60.244 52.174 0.00 0.00 0.00 3.36
2570 2638 2.704065 CCCCGTCCCAATATAAGTGACT 59.296 50.000 0.00 0.00 0.00 3.41
2571 2639 2.224450 CCCCCGTCCCAATATAAGTGAC 60.224 54.545 0.00 0.00 0.00 3.67
2572 2640 2.051692 CCCCCGTCCCAATATAAGTGA 58.948 52.381 0.00 0.00 0.00 3.41
2573 2641 2.561478 CCCCCGTCCCAATATAAGTG 57.439 55.000 0.00 0.00 0.00 3.16
2589 2657 6.847421 ATACGAATACTTACATACTCCCCC 57.153 41.667 0.00 0.00 0.00 5.40
2590 2658 7.095270 CCAATACGAATACTTACATACTCCCC 58.905 42.308 0.00 0.00 0.00 4.81
2591 2659 7.597743 CACCAATACGAATACTTACATACTCCC 59.402 40.741 0.00 0.00 0.00 4.30
2592 2660 8.139989 ACACCAATACGAATACTTACATACTCC 58.860 37.037 0.00 0.00 0.00 3.85
2593 2661 9.178427 GACACCAATACGAATACTTACATACTC 57.822 37.037 0.00 0.00 0.00 2.59
2594 2662 8.910944 AGACACCAATACGAATACTTACATACT 58.089 33.333 0.00 0.00 0.00 2.12
2611 2679 9.520515 AGTACAAAAATCAGATTAGACACCAAT 57.479 29.630 0.00 0.00 0.00 3.16
2646 2714 7.221838 ACACAAACAAAATTACAGTGCACATAC 59.778 33.333 21.04 0.00 0.00 2.39
2653 2721 9.734269 GTACAAAACACAAACAAAATTACAGTG 57.266 29.630 0.00 0.00 0.00 3.66
2674 2746 7.342284 TGAAACCTCAAAATTTACCCAGTACAA 59.658 33.333 0.00 0.00 0.00 2.41
2682 2754 8.487313 AAAACTGTGAAACCTCAAAATTTACC 57.513 30.769 0.00 0.00 34.36 2.85
2752 2824 7.619965 TCAATGGAAAGATACACAGTGATGTA 58.380 34.615 7.81 2.55 39.35 2.29
2770 2842 7.257790 TCAAACCTCTCTTTCTATCAATGGA 57.742 36.000 0.00 0.00 0.00 3.41
2783 2857 5.367945 TGTGTAAACCTTCAAACCTCTCT 57.632 39.130 0.00 0.00 0.00 3.10
2792 2866 5.413213 CGTATCCCAAATGTGTAAACCTTCA 59.587 40.000 0.00 0.00 0.00 3.02
2794 2868 5.318630 ACGTATCCCAAATGTGTAAACCTT 58.681 37.500 0.00 0.00 0.00 3.50
2806 2880 8.430431 TCCATTTGTATATGTACGTATCCCAAA 58.570 33.333 22.40 22.40 33.36 3.28
2852 2930 1.138247 CTGTACCTCGCCGTGTACC 59.862 63.158 13.95 1.91 37.19 3.34
2909 2987 4.539881 GAGCGAGACTCGACGGGC 62.540 72.222 28.43 10.01 43.74 6.13
2916 2994 2.288518 ACAAAGAGGTTGAGCGAGACTC 60.289 50.000 0.00 0.00 46.45 3.36
2917 2995 1.689273 ACAAAGAGGTTGAGCGAGACT 59.311 47.619 0.00 0.00 39.87 3.24
2918 2996 2.156343 ACAAAGAGGTTGAGCGAGAC 57.844 50.000 0.00 0.00 39.87 3.36
2919 2997 2.365617 AGAACAAAGAGGTTGAGCGAGA 59.634 45.455 0.00 0.00 39.87 4.04
2920 2998 2.760374 AGAACAAAGAGGTTGAGCGAG 58.240 47.619 0.00 0.00 39.87 5.03
2921 2999 2.910688 AGAACAAAGAGGTTGAGCGA 57.089 45.000 0.00 0.00 39.87 4.93
2922 3000 3.807622 TGTAAGAACAAAGAGGTTGAGCG 59.192 43.478 0.00 0.00 39.87 5.03
2923 3001 5.057149 TCTGTAAGAACAAAGAGGTTGAGC 58.943 41.667 0.00 0.00 42.31 4.26
2939 3017 3.128938 ACGAGAGGGAAACGATCTGTAAG 59.871 47.826 0.00 0.00 0.00 2.34
2940 3018 3.087031 ACGAGAGGGAAACGATCTGTAA 58.913 45.455 0.00 0.00 0.00 2.41
2941 3019 2.681848 GACGAGAGGGAAACGATCTGTA 59.318 50.000 0.00 0.00 0.00 2.74
2942 3020 1.473278 GACGAGAGGGAAACGATCTGT 59.527 52.381 0.00 0.00 0.00 3.41
2943 3021 1.202313 GGACGAGAGGGAAACGATCTG 60.202 57.143 0.00 0.00 0.00 2.90
2944 3022 1.104630 GGACGAGAGGGAAACGATCT 58.895 55.000 0.00 0.00 0.00 2.75
2945 3023 0.815734 TGGACGAGAGGGAAACGATC 59.184 55.000 0.00 0.00 0.00 3.69
2946 3024 1.486211 ATGGACGAGAGGGAAACGAT 58.514 50.000 0.00 0.00 0.00 3.73
2947 3025 2.022195 CTATGGACGAGAGGGAAACGA 58.978 52.381 0.00 0.00 0.00 3.85
2948 3026 1.749634 ACTATGGACGAGAGGGAAACG 59.250 52.381 0.00 0.00 0.00 3.60
2949 3027 2.159085 CCACTATGGACGAGAGGGAAAC 60.159 54.545 0.00 0.00 40.96 2.78
2950 3028 2.108168 CCACTATGGACGAGAGGGAAA 58.892 52.381 0.00 0.00 40.96 3.13
2951 3029 1.776662 CCACTATGGACGAGAGGGAA 58.223 55.000 0.00 0.00 40.96 3.97
2952 3030 0.755698 GCCACTATGGACGAGAGGGA 60.756 60.000 0.00 0.00 40.96 4.20
2953 3031 0.757188 AGCCACTATGGACGAGAGGG 60.757 60.000 0.00 0.00 40.96 4.30
2954 3032 0.387202 CAGCCACTATGGACGAGAGG 59.613 60.000 0.00 0.00 40.96 3.69
2955 3033 0.387202 CCAGCCACTATGGACGAGAG 59.613 60.000 0.00 0.00 40.96 3.20
2956 3034 0.033503 TCCAGCCACTATGGACGAGA 60.034 55.000 0.00 0.00 41.96 4.04
2957 3035 0.824109 TTCCAGCCACTATGGACGAG 59.176 55.000 0.00 0.00 46.46 4.18
2958 3036 0.535335 GTTCCAGCCACTATGGACGA 59.465 55.000 0.00 0.00 46.46 4.20
2959 3037 0.462047 GGTTCCAGCCACTATGGACG 60.462 60.000 0.00 0.00 46.46 4.79
2960 3038 0.107165 GGGTTCCAGCCACTATGGAC 60.107 60.000 0.00 0.00 46.46 4.02
2961 3039 0.253160 AGGGTTCCAGCCACTATGGA 60.253 55.000 0.00 0.00 45.15 3.41
2962 3040 1.417890 CTAGGGTTCCAGCCACTATGG 59.582 57.143 0.00 0.00 38.48 2.74
2963 3041 1.202698 GCTAGGGTTCCAGCCACTATG 60.203 57.143 0.00 0.00 38.48 2.23
2964 3042 1.132500 GCTAGGGTTCCAGCCACTAT 58.868 55.000 0.00 0.00 38.48 2.12
2965 3043 2.604118 GCTAGGGTTCCAGCCACTA 58.396 57.895 0.00 0.00 38.48 2.74
2966 3044 3.404773 GCTAGGGTTCCAGCCACT 58.595 61.111 0.00 0.00 38.48 4.00
2970 3048 1.745489 CAACGGCTAGGGTTCCAGC 60.745 63.158 0.00 0.00 37.05 4.85
2971 3049 1.745489 GCAACGGCTAGGGTTCCAG 60.745 63.158 0.00 0.00 36.96 3.86
2972 3050 2.349755 GCAACGGCTAGGGTTCCA 59.650 61.111 0.00 0.00 36.96 3.53
2973 3051 2.437895 GGCAACGGCTAGGGTTCC 60.438 66.667 0.00 0.00 40.87 3.62
2974 3052 1.745489 CTGGCAACGGCTAGGGTTC 60.745 63.158 0.00 0.00 44.20 3.62
2975 3053 2.351276 CTGGCAACGGCTAGGGTT 59.649 61.111 0.00 0.00 44.20 4.11
2980 3058 2.359169 CCTCTCCTGGCAACGGCTA 61.359 63.158 0.00 0.00 43.74 3.93
2981 3059 3.710722 CCTCTCCTGGCAACGGCT 61.711 66.667 0.00 0.00 43.74 5.52
2982 3060 3.959991 GACCTCTCCTGGCAACGGC 62.960 68.421 0.00 0.00 43.74 5.68
2983 3061 2.111999 TTGACCTCTCCTGGCAACGG 62.112 60.000 0.00 0.00 45.15 4.44
2984 3062 0.036010 ATTGACCTCTCCTGGCAACG 60.036 55.000 0.00 0.00 42.51 4.10
2985 3063 1.280421 AGATTGACCTCTCCTGGCAAC 59.720 52.381 0.00 0.00 0.00 4.17
2986 3064 1.661463 AGATTGACCTCTCCTGGCAA 58.339 50.000 0.00 0.00 0.00 4.52
2987 3065 1.556911 GAAGATTGACCTCTCCTGGCA 59.443 52.381 0.00 0.00 0.00 4.92
2988 3066 1.836802 AGAAGATTGACCTCTCCTGGC 59.163 52.381 0.00 0.00 0.00 4.85
2989 3067 3.069443 GCTAGAAGATTGACCTCTCCTGG 59.931 52.174 0.00 0.00 0.00 4.45
2990 3068 3.243367 CGCTAGAAGATTGACCTCTCCTG 60.243 52.174 0.00 0.00 0.00 3.86
2991 3069 2.955660 CGCTAGAAGATTGACCTCTCCT 59.044 50.000 0.00 0.00 0.00 3.69
2992 3070 2.544903 GCGCTAGAAGATTGACCTCTCC 60.545 54.545 0.00 0.00 0.00 3.71
2993 3071 2.544903 GGCGCTAGAAGATTGACCTCTC 60.545 54.545 7.64 0.00 0.00 3.20
2994 3072 1.410882 GGCGCTAGAAGATTGACCTCT 59.589 52.381 7.64 0.00 0.00 3.69
2995 3073 1.859383 GGCGCTAGAAGATTGACCTC 58.141 55.000 7.64 0.00 0.00 3.85
2996 3074 0.103208 CGGCGCTAGAAGATTGACCT 59.897 55.000 7.64 0.00 0.00 3.85
2997 3075 0.179108 ACGGCGCTAGAAGATTGACC 60.179 55.000 6.90 0.00 0.00 4.02
2998 3076 1.201343 GACGGCGCTAGAAGATTGAC 58.799 55.000 6.90 0.00 0.00 3.18
2999 3077 0.102481 GGACGGCGCTAGAAGATTGA 59.898 55.000 6.90 0.00 0.00 2.57
3000 3078 0.103208 AGGACGGCGCTAGAAGATTG 59.897 55.000 6.90 0.00 0.00 2.67
3001 3079 0.386113 GAGGACGGCGCTAGAAGATT 59.614 55.000 6.90 0.00 0.00 2.40
3002 3080 1.457009 GGAGGACGGCGCTAGAAGAT 61.457 60.000 6.90 0.00 0.00 2.40
3003 3081 2.119655 GGAGGACGGCGCTAGAAGA 61.120 63.158 6.90 0.00 0.00 2.87
3004 3082 2.413765 GGAGGACGGCGCTAGAAG 59.586 66.667 6.90 0.00 0.00 2.85
3005 3083 3.515286 CGGAGGACGGCGCTAGAA 61.515 66.667 6.90 0.00 39.42 2.10
3016 3094 4.816984 GAGGGGAGTCGCGGAGGA 62.817 72.222 6.13 0.00 0.00 3.71
3031 3109 2.907897 GATTGAGGTCACCGGCGGAG 62.908 65.000 35.78 26.54 0.00 4.63
3032 3110 3.000819 ATTGAGGTCACCGGCGGA 61.001 61.111 35.78 8.46 0.00 5.54
3033 3111 2.511600 GATTGAGGTCACCGGCGG 60.512 66.667 27.06 27.06 0.00 6.13
3034 3112 2.885644 CGATTGAGGTCACCGGCG 60.886 66.667 0.00 0.00 0.00 6.46
3035 3113 1.810030 GACGATTGAGGTCACCGGC 60.810 63.158 0.00 0.00 34.56 6.13
3036 3114 0.458543 CTGACGATTGAGGTCACCGG 60.459 60.000 0.00 0.00 39.36 5.28
3037 3115 0.243907 ACTGACGATTGAGGTCACCG 59.756 55.000 0.00 0.00 39.36 4.94
3038 3116 1.673033 CCACTGACGATTGAGGTCACC 60.673 57.143 0.00 0.00 39.36 4.02
3039 3117 1.000955 ACCACTGACGATTGAGGTCAC 59.999 52.381 0.00 0.00 39.36 3.67
3040 3118 1.000843 CACCACTGACGATTGAGGTCA 59.999 52.381 0.00 0.00 41.82 4.02
3041 3119 1.272490 TCACCACTGACGATTGAGGTC 59.728 52.381 0.00 0.00 34.99 3.85
3042 3120 1.273606 CTCACCACTGACGATTGAGGT 59.726 52.381 0.00 0.00 31.78 3.85
3043 3121 1.404717 CCTCACCACTGACGATTGAGG 60.405 57.143 1.68 1.68 45.59 3.86
3044 3122 1.404717 CCCTCACCACTGACGATTGAG 60.405 57.143 0.00 0.00 34.63 3.02
3045 3123 0.608130 CCCTCACCACTGACGATTGA 59.392 55.000 0.00 0.00 0.00 2.57
3046 3124 0.391661 CCCCTCACCACTGACGATTG 60.392 60.000 0.00 0.00 0.00 2.67
3047 3125 1.553690 CCCCCTCACCACTGACGATT 61.554 60.000 0.00 0.00 0.00 3.34
3048 3126 1.990060 CCCCCTCACCACTGACGAT 60.990 63.158 0.00 0.00 0.00 3.73
3049 3127 2.603473 CCCCCTCACCACTGACGA 60.603 66.667 0.00 0.00 0.00 4.20
3063 3141 2.186125 GTTGATCCGACGACCCCC 59.814 66.667 0.00 0.00 0.00 5.40
3064 3142 1.447314 GTGTTGATCCGACGACCCC 60.447 63.158 0.00 0.00 0.00 4.95
3065 3143 1.804326 CGTGTTGATCCGACGACCC 60.804 63.158 0.00 0.00 35.05 4.46
3066 3144 2.442188 GCGTGTTGATCCGACGACC 61.442 63.158 11.25 0.00 35.05 4.79
3067 3145 2.774951 CGCGTGTTGATCCGACGAC 61.775 63.158 11.25 3.68 35.05 4.34
3068 3146 2.503158 CGCGTGTTGATCCGACGA 60.503 61.111 11.25 0.00 35.05 4.20
3069 3147 2.803670 ACGCGTGTTGATCCGACG 60.804 61.111 12.93 4.39 36.18 5.12
3070 3148 2.726691 CCACGCGTGTTGATCCGAC 61.727 63.158 34.81 0.00 0.00 4.79
3071 3149 2.431771 CCACGCGTGTTGATCCGA 60.432 61.111 34.81 0.00 0.00 4.55
3072 3150 3.487202 CCCACGCGTGTTGATCCG 61.487 66.667 34.81 18.88 0.00 4.18
3073 3151 2.358247 ACCCACGCGTGTTGATCC 60.358 61.111 34.81 0.00 0.00 3.36
3074 3152 1.225376 TTGACCCACGCGTGTTGATC 61.225 55.000 34.81 24.96 0.00 2.92
3075 3153 0.605319 ATTGACCCACGCGTGTTGAT 60.605 50.000 34.81 18.56 0.00 2.57
3076 3154 0.816018 AATTGACCCACGCGTGTTGA 60.816 50.000 34.81 15.34 0.00 3.18
3077 3155 0.030101 AAATTGACCCACGCGTGTTG 59.970 50.000 34.81 27.13 0.00 3.33
3078 3156 0.741915 AAAATTGACCCACGCGTGTT 59.258 45.000 34.81 22.93 0.00 3.32
3079 3157 1.264826 GTAAAATTGACCCACGCGTGT 59.735 47.619 34.81 20.11 0.00 4.49
3080 3158 1.533731 AGTAAAATTGACCCACGCGTG 59.466 47.619 31.77 31.77 0.00 5.34
3081 3159 1.802365 GAGTAAAATTGACCCACGCGT 59.198 47.619 5.58 5.58 0.00 6.01
3082 3160 1.129811 GGAGTAAAATTGACCCACGCG 59.870 52.381 3.53 3.53 0.00 6.01
3083 3161 1.471287 GGGAGTAAAATTGACCCACGC 59.529 52.381 0.00 0.00 40.20 5.34
3084 3162 3.067684 AGGGAGTAAAATTGACCCACG 57.932 47.619 0.00 0.00 42.62 4.94
3085 3163 4.149598 ACAAGGGAGTAAAATTGACCCAC 58.850 43.478 0.00 0.00 42.62 4.61
3086 3164 4.463050 ACAAGGGAGTAAAATTGACCCA 57.537 40.909 0.00 0.00 42.62 4.51
3087 3165 5.567430 ACTACAAGGGAGTAAAATTGACCC 58.433 41.667 0.00 0.00 40.71 4.46
3088 3166 6.473758 AGACTACAAGGGAGTAAAATTGACC 58.526 40.000 0.00 0.00 0.00 4.02
3089 3167 9.152595 CTTAGACTACAAGGGAGTAAAATTGAC 57.847 37.037 0.00 0.00 0.00 3.18
3090 3168 8.877195 ACTTAGACTACAAGGGAGTAAAATTGA 58.123 33.333 0.00 0.00 0.00 2.57
3091 3169 9.503399 AACTTAGACTACAAGGGAGTAAAATTG 57.497 33.333 0.00 0.00 0.00 2.32
3094 3172 9.910267 AAAAACTTAGACTACAAGGGAGTAAAA 57.090 29.630 0.00 0.00 0.00 1.52
3097 3175 9.592196 TCTAAAAACTTAGACTACAAGGGAGTA 57.408 33.333 0.00 0.00 0.00 2.59
3098 3176 8.366401 GTCTAAAAACTTAGACTACAAGGGAGT 58.634 37.037 14.83 0.00 46.05 3.85
3099 3177 8.760103 GTCTAAAAACTTAGACTACAAGGGAG 57.240 38.462 14.83 0.00 46.05 4.30
3110 3188 8.358148 AGACGATGAACAGTCTAAAAACTTAGA 58.642 33.333 0.00 0.00 44.93 2.10
3111 3189 8.522178 AGACGATGAACAGTCTAAAAACTTAG 57.478 34.615 0.00 0.00 44.93 2.18
3112 3190 8.761497 CAAGACGATGAACAGTCTAAAAACTTA 58.239 33.333 0.00 0.00 45.91 2.24
3113 3191 7.254795 CCAAGACGATGAACAGTCTAAAAACTT 60.255 37.037 0.00 0.00 45.91 2.66
3114 3192 6.202954 CCAAGACGATGAACAGTCTAAAAACT 59.797 38.462 0.00 0.00 45.91 2.66
3115 3193 6.363473 CCAAGACGATGAACAGTCTAAAAAC 58.637 40.000 0.00 0.00 45.91 2.43
3116 3194 5.049680 GCCAAGACGATGAACAGTCTAAAAA 60.050 40.000 0.00 0.00 45.91 1.94
3117 3195 4.451096 GCCAAGACGATGAACAGTCTAAAA 59.549 41.667 0.00 0.00 45.91 1.52
3118 3196 3.994392 GCCAAGACGATGAACAGTCTAAA 59.006 43.478 0.00 0.00 45.91 1.85
3119 3197 3.006430 TGCCAAGACGATGAACAGTCTAA 59.994 43.478 0.00 0.00 45.91 2.10
3120 3198 2.560981 TGCCAAGACGATGAACAGTCTA 59.439 45.455 0.00 0.00 45.91 2.59
3122 3200 1.795768 TGCCAAGACGATGAACAGTC 58.204 50.000 0.00 0.00 37.63 3.51
3123 3201 2.350522 GATGCCAAGACGATGAACAGT 58.649 47.619 0.00 0.00 0.00 3.55
3124 3202 1.325640 CGATGCCAAGACGATGAACAG 59.674 52.381 0.00 0.00 0.00 3.16
3125 3203 1.358877 CGATGCCAAGACGATGAACA 58.641 50.000 0.00 0.00 0.00 3.18
3126 3204 0.652592 CCGATGCCAAGACGATGAAC 59.347 55.000 0.00 0.00 0.00 3.18
3127 3205 1.089481 GCCGATGCCAAGACGATGAA 61.089 55.000 0.00 0.00 0.00 2.57
3128 3206 1.521457 GCCGATGCCAAGACGATGA 60.521 57.895 0.00 0.00 0.00 2.92
3129 3207 2.874694 CGCCGATGCCAAGACGATG 61.875 63.158 0.00 0.00 0.00 3.84
3130 3208 2.586079 CGCCGATGCCAAGACGAT 60.586 61.111 0.00 0.00 0.00 3.73
3131 3209 4.812476 CCGCCGATGCCAAGACGA 62.812 66.667 0.00 0.00 0.00 4.20
3143 3221 4.889856 TGGTCATCATCGCCGCCG 62.890 66.667 0.00 0.00 0.00 6.46
3144 3222 3.272334 GTGGTCATCATCGCCGCC 61.272 66.667 0.00 0.00 0.00 6.13
3145 3223 2.511373 TGTGGTCATCATCGCCGC 60.511 61.111 0.00 0.00 0.00 6.53
3146 3224 1.153568 AGTGTGGTCATCATCGCCG 60.154 57.895 0.00 0.00 0.00 6.46
3147 3225 0.108186 TCAGTGTGGTCATCATCGCC 60.108 55.000 0.00 0.00 0.00 5.54
3148 3226 1.725641 TTCAGTGTGGTCATCATCGC 58.274 50.000 0.00 0.00 0.00 4.58
3149 3227 5.812127 TCTTTATTCAGTGTGGTCATCATCG 59.188 40.000 0.00 0.00 0.00 3.84
3150 3228 7.798596 ATCTTTATTCAGTGTGGTCATCATC 57.201 36.000 0.00 0.00 0.00 2.92
3151 3229 8.051535 AGAATCTTTATTCAGTGTGGTCATCAT 58.948 33.333 1.35 0.00 43.44 2.45
3152 3230 7.397221 AGAATCTTTATTCAGTGTGGTCATCA 58.603 34.615 1.35 0.00 43.44 3.07
3153 3231 7.856145 AGAATCTTTATTCAGTGTGGTCATC 57.144 36.000 1.35 0.00 43.44 2.92
3154 3232 7.065085 CGAAGAATCTTTATTCAGTGTGGTCAT 59.935 37.037 0.00 0.00 43.44 3.06
3155 3233 6.368791 CGAAGAATCTTTATTCAGTGTGGTCA 59.631 38.462 0.00 0.00 43.44 4.02
3156 3234 6.183360 CCGAAGAATCTTTATTCAGTGTGGTC 60.183 42.308 0.00 0.00 43.44 4.02
3157 3235 5.643777 CCGAAGAATCTTTATTCAGTGTGGT 59.356 40.000 0.00 0.00 43.44 4.16
3158 3236 5.874810 TCCGAAGAATCTTTATTCAGTGTGG 59.125 40.000 0.00 0.00 43.44 4.17
3159 3237 6.968131 TCCGAAGAATCTTTATTCAGTGTG 57.032 37.500 0.00 0.00 43.44 3.82
3160 3238 8.043710 AGAATCCGAAGAATCTTTATTCAGTGT 58.956 33.333 19.41 5.57 43.44 3.55
3161 3239 8.430801 AGAATCCGAAGAATCTTTATTCAGTG 57.569 34.615 19.41 0.00 43.44 3.66
3162 3240 9.103861 GAAGAATCCGAAGAATCTTTATTCAGT 57.896 33.333 19.41 11.94 41.40 3.41
3163 3241 9.323985 AGAAGAATCCGAAGAATCTTTATTCAG 57.676 33.333 19.41 0.00 41.40 3.02
3164 3242 9.319143 GAGAAGAATCCGAAGAATCTTTATTCA 57.681 33.333 19.41 0.00 41.40 2.57
3165 3243 9.541143 AGAGAAGAATCCGAAGAATCTTTATTC 57.459 33.333 13.88 13.88 41.40 1.75
3166 3244 9.323985 CAGAGAAGAATCCGAAGAATCTTTATT 57.676 33.333 0.00 0.00 41.40 1.40
3167 3245 8.700051 TCAGAGAAGAATCCGAAGAATCTTTAT 58.300 33.333 0.00 0.00 41.40 1.40
3168 3246 7.976734 GTCAGAGAAGAATCCGAAGAATCTTTA 59.023 37.037 0.00 0.00 41.40 1.85
3169 3247 6.816140 GTCAGAGAAGAATCCGAAGAATCTTT 59.184 38.462 0.00 0.00 41.40 2.52
3170 3248 6.337356 GTCAGAGAAGAATCCGAAGAATCTT 58.663 40.000 0.00 0.00 43.51 2.40
3171 3249 5.449862 CGTCAGAGAAGAATCCGAAGAATCT 60.450 44.000 0.00 0.00 33.47 2.40
3172 3250 4.737765 CGTCAGAGAAGAATCCGAAGAATC 59.262 45.833 0.00 0.00 0.00 2.52
3173 3251 4.399618 TCGTCAGAGAAGAATCCGAAGAAT 59.600 41.667 0.00 0.00 0.00 2.40
3174 3252 3.756963 TCGTCAGAGAAGAATCCGAAGAA 59.243 43.478 0.00 0.00 0.00 2.52
3175 3253 3.344515 TCGTCAGAGAAGAATCCGAAGA 58.655 45.455 0.00 0.00 0.00 2.87
3176 3254 3.766676 TCGTCAGAGAAGAATCCGAAG 57.233 47.619 0.00 0.00 0.00 3.79
3191 3269 0.033503 TAGGACTGATGGCCTCGTCA 60.034 55.000 3.32 5.05 37.37 4.35
3192 3270 1.000283 CATAGGACTGATGGCCTCGTC 60.000 57.143 3.32 10.54 35.73 4.20
3193 3271 1.043816 CATAGGACTGATGGCCTCGT 58.956 55.000 3.32 0.00 35.73 4.18
3194 3272 0.319728 CCATAGGACTGATGGCCTCG 59.680 60.000 3.32 0.00 37.64 4.63
3195 3273 1.428869 ACCATAGGACTGATGGCCTC 58.571 55.000 3.32 0.00 46.76 4.70
3196 3274 1.492176 CAACCATAGGACTGATGGCCT 59.508 52.381 3.32 0.00 46.76 5.19
3197 3275 1.477558 CCAACCATAGGACTGATGGCC 60.478 57.143 0.00 0.00 46.76 5.36
3198 3276 1.477558 CCCAACCATAGGACTGATGGC 60.478 57.143 1.52 0.00 46.76 4.40
3200 3278 2.126882 TCCCCAACCATAGGACTGATG 58.873 52.381 0.00 0.00 0.00 3.07
3201 3279 2.587060 TCCCCAACCATAGGACTGAT 57.413 50.000 0.00 0.00 0.00 2.90
3202 3280 2.126882 CATCCCCAACCATAGGACTGA 58.873 52.381 0.00 0.00 30.97 3.41
3203 3281 2.126882 TCATCCCCAACCATAGGACTG 58.873 52.381 0.00 0.00 30.97 3.51
3204 3282 2.587060 TCATCCCCAACCATAGGACT 57.413 50.000 0.00 0.00 30.97 3.85
3205 3283 3.884037 ATTCATCCCCAACCATAGGAC 57.116 47.619 0.00 0.00 30.97 3.85
3206 3284 4.545678 CAAATTCATCCCCAACCATAGGA 58.454 43.478 0.00 0.00 0.00 2.94
3207 3285 3.642848 CCAAATTCATCCCCAACCATAGG 59.357 47.826 0.00 0.00 0.00 2.57
3208 3286 4.545678 TCCAAATTCATCCCCAACCATAG 58.454 43.478 0.00 0.00 0.00 2.23
3209 3287 4.616671 TCCAAATTCATCCCCAACCATA 57.383 40.909 0.00 0.00 0.00 2.74
3210 3288 3.488355 TCCAAATTCATCCCCAACCAT 57.512 42.857 0.00 0.00 0.00 3.55
3211 3289 3.266477 TTCCAAATTCATCCCCAACCA 57.734 42.857 0.00 0.00 0.00 3.67
3212 3290 3.307410 GGTTTCCAAATTCATCCCCAACC 60.307 47.826 0.00 0.00 0.00 3.77
3213 3291 3.326297 TGGTTTCCAAATTCATCCCCAAC 59.674 43.478 0.00 0.00 0.00 3.77
3214 3292 3.582208 CTGGTTTCCAAATTCATCCCCAA 59.418 43.478 0.00 0.00 30.80 4.12
3215 3293 3.172339 CTGGTTTCCAAATTCATCCCCA 58.828 45.455 0.00 0.00 30.80 4.96
3216 3294 3.173151 ACTGGTTTCCAAATTCATCCCC 58.827 45.455 0.00 0.00 30.80 4.81
3217 3295 4.089361 AGACTGGTTTCCAAATTCATCCC 58.911 43.478 0.00 0.00 30.80 3.85
3218 3296 7.122650 TGAATAGACTGGTTTCCAAATTCATCC 59.877 37.037 0.00 0.00 30.67 3.51
3219 3297 8.055279 TGAATAGACTGGTTTCCAAATTCATC 57.945 34.615 0.00 0.00 30.67 2.92
3220 3298 8.421249 TTGAATAGACTGGTTTCCAAATTCAT 57.579 30.769 12.08 0.00 33.14 2.57
3221 3299 7.523709 GCTTGAATAGACTGGTTTCCAAATTCA 60.524 37.037 0.00 0.00 32.18 2.57
3222 3300 6.808704 GCTTGAATAGACTGGTTTCCAAATTC 59.191 38.462 0.00 0.00 30.80 2.17
3223 3301 6.267471 TGCTTGAATAGACTGGTTTCCAAATT 59.733 34.615 0.00 0.00 30.80 1.82
3224 3302 5.774690 TGCTTGAATAGACTGGTTTCCAAAT 59.225 36.000 0.00 0.00 30.80 2.32
3225 3303 5.136828 TGCTTGAATAGACTGGTTTCCAAA 58.863 37.500 0.00 0.00 30.80 3.28
3226 3304 4.724399 TGCTTGAATAGACTGGTTTCCAA 58.276 39.130 0.00 0.00 30.80 3.53
3227 3305 4.365514 TGCTTGAATAGACTGGTTTCCA 57.634 40.909 0.00 0.00 0.00 3.53
3228 3306 5.473504 TCTTTGCTTGAATAGACTGGTTTCC 59.526 40.000 0.00 0.00 0.00 3.13
3229 3307 6.560253 TCTTTGCTTGAATAGACTGGTTTC 57.440 37.500 0.00 0.00 0.00 2.78
3230 3308 6.716628 TCATCTTTGCTTGAATAGACTGGTTT 59.283 34.615 0.00 0.00 0.00 3.27
3231 3309 6.150140 GTCATCTTTGCTTGAATAGACTGGTT 59.850 38.462 0.00 0.00 0.00 3.67
3232 3310 5.645497 GTCATCTTTGCTTGAATAGACTGGT 59.355 40.000 0.00 0.00 0.00 4.00
3233 3311 5.645067 TGTCATCTTTGCTTGAATAGACTGG 59.355 40.000 0.00 0.00 0.00 4.00
3234 3312 6.732531 TGTCATCTTTGCTTGAATAGACTG 57.267 37.500 0.00 0.00 0.00 3.51
3235 3313 6.318144 CCATGTCATCTTTGCTTGAATAGACT 59.682 38.462 0.00 0.00 0.00 3.24
3236 3314 6.493116 CCATGTCATCTTTGCTTGAATAGAC 58.507 40.000 0.00 0.00 0.00 2.59
3237 3315 5.066893 GCCATGTCATCTTTGCTTGAATAGA 59.933 40.000 0.00 0.00 0.00 1.98
3238 3316 5.279384 GCCATGTCATCTTTGCTTGAATAG 58.721 41.667 0.00 0.00 0.00 1.73
3239 3317 4.201940 CGCCATGTCATCTTTGCTTGAATA 60.202 41.667 0.00 0.00 0.00 1.75
3240 3318 3.428452 CGCCATGTCATCTTTGCTTGAAT 60.428 43.478 0.00 0.00 0.00 2.57
3241 3319 2.095110 CGCCATGTCATCTTTGCTTGAA 60.095 45.455 0.00 0.00 0.00 2.69
3242 3320 1.469703 CGCCATGTCATCTTTGCTTGA 59.530 47.619 0.00 0.00 0.00 3.02
3243 3321 1.468565 CCGCCATGTCATCTTTGCTTG 60.469 52.381 0.00 0.00 0.00 4.01
3244 3322 0.813184 CCGCCATGTCATCTTTGCTT 59.187 50.000 0.00 0.00 0.00 3.91
3245 3323 1.660560 GCCGCCATGTCATCTTTGCT 61.661 55.000 0.00 0.00 0.00 3.91
3246 3324 1.226773 GCCGCCATGTCATCTTTGC 60.227 57.895 0.00 0.00 0.00 3.68
3247 3325 1.063006 CGCCGCCATGTCATCTTTG 59.937 57.895 0.00 0.00 0.00 2.77
3248 3326 1.078497 TCGCCGCCATGTCATCTTT 60.078 52.632 0.00 0.00 0.00 2.52
3249 3327 1.815421 GTCGCCGCCATGTCATCTT 60.815 57.895 0.00 0.00 0.00 2.40
3250 3328 2.202932 GTCGCCGCCATGTCATCT 60.203 61.111 0.00 0.00 0.00 2.90
3251 3329 3.630148 CGTCGCCGCCATGTCATC 61.630 66.667 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.