>input_sequence_55903
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----------------------------------------------------------------------ATGATCCGAC
CAGGCTCCAAGGAGTCACAAAATTATGATAACAACAGCCAGAAAGTTTATCCTCAACCAATTGATGAAAATATGAATCAG
AACATGGACACGATGGACAGTATGATTGGAAGGATATTCAACAACATATCCTCTTTAAAAGCTGCATACATTCAGCTGCA
GGAAGCTCACACCCCTTATGACCCGGACAAGATCCAAACTGCTGATAAGCTTGTCATAGATGAGCTCACGAGGCTTTCTG
AACTCAAGCATACTTACAGAGAGAGAAATCCTAAGCCAGTAGCAGCATCACCTCAAGATTCACGCTTGCTTTCTGAAATA
CAGGAACAGCAGAACTTGCTAAAGACATATGAGGTCATGGTGAAGAAGTTCCAGTCACAGATCCAGAATAGAGATACCGA
GATTACCCTTCTACAGCAGCAAATCGATGAGGCGAAACATCGGAAATCAAAGCTGGAGAAGAAATTGAAACAAAGGGGCT
TACTTAACAAAGAATCTGAGGAATCTGATGAAGAAGAGAACTACTTCTCTATTGAGCTGACGCCAAGTTTATTTACATCT
GCTACTGATAATGCATACCAATCAATACATGATTTCTCGAAGCCCTTGATCAACATGATGAAAGCTGCTGGGTGGGATCT
CGATGCTGCTGCTAACGCAATTGAACCTGATGTAGTTTACACAAGGAGAGCTCATAAGAAGTATGCATTTGAGTCCTATA
TTTGCCAAAGAATGTTCAGTGGTTTCCATGAAGAGAGCTTTTCCATCAAGGCTGCTACTGCCAGTGTCTCCAATGAGGCT
TTCTTCCACCAGTTCCTTGCAGTACGAGCCATGGATCCTCTTGATGTATTGAGCCAAAACCCAGATTCTGTTTTCGGAAA
GTTCTGCAGGAGCAAATACCTGTTACTTGTGCATCCAAAAATGGAAGGTTCTTTCTTCGGTAACATGGATCAGAGAAACT
ACGTCATGAGCGGTGGCCATCCAAGGACAGCTTTCTATCAGGCATTTCTCAAGTTGGCGAAGTCCATATGGTTATTGCAT
AGGCTGGCATACTCTTTCGATCCAAAGGTCAGGGTCTTCCAAGTGAAAAAGGGAAGCGAGTTCTCGGAGATTCACATGGA
AAGCGTAGTCAAGAACATGGTCTTGGATGAAAGTGCCGAGAGGCCTAAAGTAGGTTTAATGGTGATGCCTGGTTTCTTGA
TTGGGACTAGCGTCATACAGGCCCGAGTGTACCTTTCAGATGTCAAATACGCTGACTGA---------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr4B_1_TraesCS4B01G134400
TTGCAGTAGGCGGTTGGCACACAGGGGGCAAATTCAAGTACAGTTCAGACTATAGACTTTCTCCAAGCATTTATACTTCT
TTTTTTAG-----TGGGCCCACTATAGCGAAGGCTTGGGAGGGAAGCAGT-TATGATTAGGATTCACGTTTTTCTTGCTT
AGGAGGCAATCAACATCATCTTCAGCACTGTAGTATATGTGACAGTGAAGCTATTTAATCTGGTTCAGCGACCTGTGAAG
AGGCAGGAAGTTGATAGGCCATAAGGTGTGCCGAGACTGTGATTGGCAGTGGCGGAGCTAGGTTCATTTCTCTGGGCGGG
CCAAAACTGGGCAGGTTAACAAATACCATTAAAATTTTGCTCTTAGGGCCCAGATTAAGCGCTGCTCTTGACTGAAATGT
TGGTGGGTTGGGCGGGCCATGGCCTGGTTCGGCCCAGCCGTAGCTCCATCACTGGTGATTGGTATCTAATTTTGCCATTG
GTTTCCCCATATAGGCTACCTGCATTATAG----------------TTCCACTGACCATATGACTTGGAATGAATCTTCT
CTTGACTCCTCAAAGGTCAGCATCCTAATGCATAAAATGCGGTTCTTACCGTTCATCTTGGGAGATCGACTGATAATTGA
C-TATTTTTAGATGTCCTGCTCGATTACTCAATGTTTTTTTGATCTGTTTCATTCTTGGGTTGGATGGCATGGAGGTCAT
GTTATATGGAACATCTGTTTGTTCAAGCTTGAGAGTATGAGGGTGTGGTTATAT-AATCTCTGTCTTAGAGCAATCCAGA
GCATGCTGTAGTCTACTTTGTCTGAATCTCTTTCTCTTCTTATTATAGGATGTGAAATACTTATGAAG---GTCGCTTTT
GAGCCA---TTCCTATTCTGTCCACTTATGCAGTTCACATTTTTGTCCTGTAAATAATGACCTGAACTCAGTAGTTGCTT
TTGCAGGTAGATGTCCACTTGTACTTTGATTGAAGACAACTAACTTTGTTGATCCTGAGGGCAAGAAGTAATGATCCGAC
CAGGCTCCAAGGAGTCACAAAATTATGATAACAACAGCCAGAAAGTTTATCCTCAACCAATTGATGAAAATATGAATCAG
AACATGGACACGATGGACAGTATGATTGGAAGGATATTCAACAACATATCCTCTTTAAAAGCTGCATACATTCAGCTGCA
GGAAGCTCACACCCCTTATGACCCGGACAAGATCCAAACTGCTGATAAGCTTGTCATAGATGAGCTCACGAGGCTTTCTG
AACTCAAGCATACTTACAGAGAGAGAAATCCTAAGCCAGTAGCAGCATCACCTCAAGATTCACGCTTGCTTTCTGAAATA
CAGGAACAGCAGAACTTGCTAAAGACATATGAGGTCATGGTGAAGAAGTTCCAGTCACAGATCCAGAATAGAGATACCGA
GATTACCCTTCTACAGCAGCAAATCGATGAGGCGAAACATCGGAAATCAAAGCTGGAGAAGAAATTGAAACAAAGGGGCT
TACTTAACAAAGAATCTGAGGAATCTGATGAAGAAGAGAACTACTTCTCTATTGAGCTGACGCCAAGTTTATTTACATCT
GCTACTGATAATGCATACCAATCAATACATGATTTCTCGAAGCCCTTGATCAACATGATGAAAGCTGCTGGGTGGGATCT
CGATGCTGCTGCTAACGCAATTGAACCTGATGTAGTTTACACAAGGAGAGCTCATAAGAAGTATGCATTTGAGTCCTATA
TTTGCCAAAGAATGTTCAGTGGTTTCCATGAAGAGAGCTTTTCCATCAAGGCTGCTACTGCCAGTGTCTCCAATGAGGCT
TTCTTCCACCAGTTCCTTGCAGTACGAGCCATGGATCCTCTTGATGTATTGAGCCAAAACCCAGATTCTGTTTTCGGAAA
GTTCTGCAGGAGCAAATACCTGTTACTTGTGCATCCAAAAATGGAAGGTTCTTTCTTCGGTAACATGGATCAGAGAAACT
ACGTCATGAGCGGTGGCCATCCAAGGACAGCTTTCTATCAGGCATTTCTCAAGTTGGCGAAGTCCATATGGTTATTGCAT
AGGCTGGCATACTCTTTCGATCCAAAGGTCAGGGTCTTCCAAGTGAAAAAGGGAAGCGAGTTCTCGGAGATTCACATGGA
AAGCGTAGTCAAGAACATGGTCTTGGATGAAAGTGCCGAGAGGCCTAAAGTAGGTTTAATGGTGATGCCTGGTTTCTTGA
TTGGGACTAGCGTCATACAGGCCCGAGTGTACCTTTCAGATGTCAAATACGCTGACTGAAAG-TGTTGCAGTTGCTTGAG
AAGATTCAGGGTGTTTTAGTTCATGTGGGCTCATTTAGTTGCATCTGAAATGGCGGGGGACTTGTGTATGTCTGTTTCGT
GTGTGAATGTGTGATGCTACATGAAAAGATGTTATTCAGATGAAATGTGGCAGTC--TAGCAGCACGTTTGTGAAAGACC
TTCATATGCTTGTCCTTTTAAGACTAGAATGTTTATTCTCTCTGTTCCGTGATATATC----------------------
------GTTGGTTTGATTTGGATGTTGCAGCCTATGTGATGACTACACAACC------ATGTTGCCATACAAAGTTGAGT
CACTTATATTGGGACGGGGGGAGTATGTAAGTATTCGTATTGGTGTCTAATCTGATTTTTGTACTGTAATACTGTATGTG
CACTGTAA----TTTTGTTTGTGTTTTGTACTGGGTAAATTTTGAGGTTTCACAGTTTTTCGCGAATACGCAATTTTTTT
GTGTATCTTCCCCCCTCTTTTTTTACATCACTGTGTATCTTTCCATTGATA--GAAAGAGAGGTTTGAAGGTTTACACAT
TTGGGATACG----TACATATACAAATGGAATAACTGAATCGTTTTAGAGGTACACGGCGAGGTACAGTTTCTCCTCACG
CGAGGGTTTTCGCTGCGCCTTATCGGGCCCGTCGAGTCTCGCTCAACCTCTTTGTTCTTACAGATCGTTTCCCTCTCGTC
CATAGTGGCTGGAACCCTAGCCGTTGCCAGGAGAGGTCAATCTTCTAGCGCCGTCCTCCGCGACTCCCCTCCGCCGGTGA
CCTCAATCGTCAGTGGTGAGGGGGGTCGTCGGATCAACACGCGTGGGTCAATTTTACTCCCTTGTAGTCTAAGTTTTTAG
ACTGTTCATCGTCTTGGCATCGGCGGCGATGATGACCACACTGAATAAAGATTCTTCGGATTCTTCTCTGACGAGGCCAT
CAGTCCTATGGTTGGGGATGAATTTGGAAACCAGTCTATTCAAGCAAAGATGACATGGCGGCGACG
>chr4A_1
TTGCAATAGGTTGTTAGCGCACAATGGGCAAATTCAAGGATAGTTCAGACTATAGGTTTTCTCTGTGCATTTATACTAAC
TTTTTATAGAATTTGGCCCCGCTATAGCCAAGGCTTGGGAGGGAAGCAAGGTATGATTAGGATTCGCATGCTTCTTGCTT
AGGAGGCAATCAACATAATCTTCATCACTGTAGGATATGTGACAGTGAAGCTTTTTAATCTGGTTCAGCGACCTGTGAAG
AGGCAGGGAGTTGATAGGCCATAAGGTGTGCCGAGACTCTGATTGTCAGTGGCGGAGCTACATTCATTTCTCTGGGCGGG
CCAAAACAGGCCAGGTTAACAAATACCATTAAAACTTTGCTCTTAGGGCCCAGATTCAGCGCTGCTCTTGACTGAAATCT
TGCTGGATTGGGCGGGCCATGGCCTGGTTTGGCCCAGCCGTAGCTCCGCCACTGGTGATTGGTATCTAATGTTGCCATTG
GTTTCTCCATATAGGCTACCTGCATTATAGCTTCTTGTACTCATAGTCCCATGGACCATATGACTTGAAATGAATCTTCT
CTTGACTCCTTAAAGGTCAGCAGCCTAATGCGTAAAATGCGGTTCTTACCGTTCATCTTGGGAGATCGACTGATCATTGA
C-TATTGTTAGATGTCCTGCTCGATTACTCAATGTTTTTCTGATCTTTTTCGTTTTTGGGTTGGGTGGCATGGAGGTCAT
GTTAT--TGAACATCTG-TTGTTCAAGCTTGAGATTATGAGGGTGTGGTTGTATTAATCTCTGTCTCACAGCAACCCAGA
GCATGTTGTAGTTTACTTTGTCTGAATCTCTTTCTCTTCTTATTATAGGATGTGAAATACTTACGAAG---GTCGCTTTT
GAGCCA---TTCCTATTCTGGCCACTTATGCAGTTCATATTTTTGTCCTGTAAATTATGACCTGAACTCAGTAGTTGCTT
TTGCAGGTGGATGTCCACCTGTACTTTGATTGAAGACAACTAACTTTGTTGTTCCTGAGGGCAAGAAGTAATGATCCGAC
CAGGCTCCAAGGAGTCACAAATTTATGATAACAATAGTCAGAAAGTTTATCCTCAGCCAATTGATGAAACTATGAATCAG
AACATGGACACGATGGACAGTATGATTGGAAGGATATTCAACAACATATCCTCTTTAAAAGCTGCATACATTCAGCTGCA
GGAAGCTCACACCCCTTATGACCCGGACAAGATCCAAACTGCTGATAAGCTTGTCATAGATGAGCTCACGAGGCTTTCAG
AACTCAAGCATACTTACAGAGAGAAAAATCCTAAGCCAGTAGCAGCATCACCTCAAGATTCACGCTTGCTTTCTGAAATA
CAGGAGCAGCAGAACTTGCTAAAGACATATGAGGTCATGGTGAAGAAGTTCCAGTCACAGATCCAGAATAGAGATACCGA
GATTACCCTTTTACAGCAGCAAATCGATGAGGCGAAGCATCGGAAATCAAAGCTGGAGAAGAAATTGAAACAGAGGGGCT
TACTTAACAAAGAATCTGAGGAATCTGATGAAGAAGAGAACTACTTCTCTATTGAGCTGACACCAAGTTTATTTACATCT
GCTGCTGATAATGCATACCAATCAATACACGATTTCTCAAAGCCCTTGATCAACATGATGAAAGCTGCTGGGTGGGATCT
CGATGCGGCTGCTAACGCAATTGAACCTGATGTAGTTTACACAAGGAGAGCTCATAAGAAGTATGCATTTGAGTCCTATA
TCTGCCAAAGAATGTTCAGTGGTTTCCATGAAGAGAGCTTTTCCATCAAGGCTGCTACTGCCAGTGTGTCCAATGAGGCT
TTCTTCCACCAGTTCCTTGCAGTGCGAGCCATGGATCCTCTTGATGTATTGAGCCAGAACCCAGATTCGGTTTTCGGGAA
GTTCTGCAGAAGCAAATACCTGTTACTTGTGCATCAAAAAATGGAAGGCTCTTTCTTCGGTAACATGGATCAGAGAAACT
ACGTCATGAGCGGTGGCCATCCAAGGACAGCTTTCTATCAGGCATTTCTCAAGTTGGCGAAGTCCATATGGTTATTGCAT
AGGCTGGCATACTCTTTCGATCCAAAGGTCAGGGTCTTCCAAGTGAAAAAGGGAAGCGAGTTCTCGGAGATTCACATGGA
AAGTGTGGTGAAGAACATGGTCTTGGATGAAAGTGCCGACAGGCCTAAAGTAGGTTTAATGGTGATGCCTGGTTTCTTGA
TTGGGACTAGCGTCATACAGGCCCGAGTGTACCTTTCAGATGTTAAATATGCTGACTGAAAA-TGCTGCAGTTGCTTGGG
AAGATTCAGGGCGTATTAGTTCCTGTGGGCTCATTTAGTTGCATCTGAAATGGCGGGGGACTT-TGTGTGTCTGTGTCGT
GT--------GTGATGCTACCTGAAAGGATGTTATTCAGATGAAATGTGGTAGTCTATAGCAACACGTTTGTGAAAGACC
TTCATATGCTTGTCTTTTTAAGACTAGAATGTTTATTCTCTCTGTTGCGTGATGTAATCCTGTCCAGTGTTTGGTATATA
TATATTGTTGGTCTGATTTGGATGTTGCAGCCTATGTGATGACTGCACAACCCTTTTCATGTTGCCATGTACT-------
----------------------GTATGTAAGTATTCTTGTTGGTGTCTAATCTGGTTTTTGTACTGTAATACTATATGTG
TACAGTAA----TTTTGTTTGTGTTCTGTACTGTGTAAATTTTGAGGTTTCACAGTTTTTCGTGAATACGCAA-AATTCT
GTGTATCTTACATT---TTTTTTGACATCACTGTGTATTTTCCCATTGATATAG-----GAGATTCGGAGGTTTACACAC
TTGGGATATGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr4D_1
TTGCAGTAGGTTGTTAGCGCACAGTGGGCAAATTCAAGTATAGTTCAGACTATAGTTTTTCTGTATGCATTTATACTAAC
TTTTTATAGAATTTGGGCCCGCTATAGCCAAGGCTTGGGAGGGAAGCAAGGTATGATTAGGATTCACATGCTTCTTGCTT
AGGAGGCAATCAAC---ATCTTCATCACTGTAGGATATGTGACAGTGAAGCTCTTTAATCTGGTTCAGCGACCTGTGAAG
AGGCAGGGAGTTGATAGGCCATAAGGTGTGCCGAGACTCTGATTGTCAGTGGCGGAGCTACATTCATTTCTCTGGGCGGG
CCAAAACGGGCCAGATTAACAAATACCATTAAAATTTTGCGCTTAGGGCCCAGATTCAGCGCTGCTCTTGACTGAAATCT
TTCTGGGTTGGGCGGGCCATGGCCTGGTTTGGCCCAGCCGTAGCTCCGCCACTGGTGATTGGTATCTAATGTTGCCATTG
GTTTCTCCATATAGGCTACCTGCATTATAGCTTCTTGTACTTATAGTTCCACAGACCATATGACTTGAAATGAATCTTCT
CTTGACTCCTTAAAGGTCAGCAACCTAGTGCGTAAAATGCGGTTCTTACCGTTCATCTTGGGAGATCGACTGATCATTGA
C-TATTGTTAGATGTCCTGCTCGATTACTCAATGTTTTTCTGATCTTTTTCGTTTTTGGGTTGGGTGGCATGGAGGTCAT
GTTAT--GGAACATCTG-TTGTTCAAGCTTGAGATTATGAAGGTGTGGTTGTATTAATCTCTGTCTTACAGCAACCCAGA
GCATGCTGTAGTTTACTTTGTTTGAATCTCTTTCTCTTCTTATTATAGGATGTGAAATACTTACGAAG---GTCGCTTTT
GAGCCA---TTCCTATTCTGGCCACTTATGCAGTTCATATTTTTGTCCTGTAAATTATGACCTGAACCCAGTAGTTGCTT
TTGCAGGTGGATGTCCACCTGTACTTTGATTGAAGACAACTAACTTTGTTGTTCCTGAGGGCAAGAAGTAATGATCCGAC
CAGGCTCCAAGGAGTCACAAATTTATGATAACAATAGTCAGAAAGTTTATCCTCAGCCAATTGATGAAAATATGAATCAG
AACATGGACACGATGGACAGTATGATTGGAAGGATATTCAACAACATATCCTCTTTAAAAGCTGCATACATTCAGCTGCA
GGAAGCTCACACCCCTTACGACCCGGACAAGATCCAAACTGCTGATAAGCTTGTCATAGATGAGCTCACGAGGCTTTCAG
AACTCAAGCATACTTACAGAGAGAAAAATCCTAAGCCAGTAGCAGCATCACCTCAAGATTCACGCTTGCTTTCTGAAATA
CAGGAGCAGCAGAACTTGCTAAAGACATATGAGGTCATGGTGAAGAAGTTCCAGTCACAGATCCAGAATAGAGATACCGA
GATTACCCTTTTACAGCAGCAAATTGATGAGGCGAAACATCGGAAATCAAAGCTGGAGAAGAAATTGAAACAGAGGGGCT
TACTTAACAAAGAATCTGAGGAATCTGATGAAGAAGAGAACTACTTCTCTATTGAGCTGACACCAAGTTTATTTACATCT
GCTGCAGATAATGCATACCAATCAATACACGATTTCTCAAAGCCCTTGATCAACATGATGAAAGCTGCTGGGTGGGATCT
CGATGCGGCTGCTAACGCAATTGAACCTGATGTAGTTTACACAAGGAGAGCTCATAAGAAGTATGCATTTGAGTCCTATA
TCTGCCAAAGAATGTTCAGTGGTTTCCATGAAGAGAGCTTTTCCATCAAGGCTGCTACTGCCAGTGTGTCCAATGAGGCT
TTCTTCCACCAGTTCCTTGCAGTGCGAGCCATGGATCCTCTTGATGTATTGAGCCAGAACCCAGATTCGGTTTTCGGAAA
GTTCTGCAGAAGCAAATACCTGTTACTTGTGCATCCAAAAATGGAAGGCTCTTTCTTCGGTAACATGGATCAGAGAAACT
ACGTCATGAGCGGTGGCCATCCAAGGACAGCTTTCTATCAGGCATTTCTCAAGTTGGCGAAGTCCATATGGTTATTGCAC
AGGCTGGCGTACTCTTTCGATCCAAAGGTCAGGGTCTTCCAAGTGAAAAAGGGAAGCGAGTTCTCGGAGATTCACATGGA
AAGCGTAGTCAAGAACATGGTCTTGGATGAAAGTGCCGAGAGGCCTAAAGTAGGTTTAATGGTGATGCCTGGTTTCTTGA
TTGGGACTAGCGTCATACAGGCCCGAGTGTACCTATCAGATGTCAAATATGCTGACTGAAAA-TGCTGCAGTTGCTTGGG
AAGATTCAGGGCGTATTAGTTCCTGCGGGCTCATTTAGTTGCATCTGAAATGGCGGGGGACTT-TGTGTGTCTGTGTCGT
GT--------GTGATGCTACCTGAAAGGATGTTATTCAGATGAAATGTGGTAGTC--TAGCAACACGTTTGTGAAAGACT
TTCGTATGCTTGTCTTTTTAAGACTAGAATGTTTGTTCTCTCTGTTGCGTGATGTAATCCTGTCCAGTGTTTGGTGTATA
TATATTGTTGGTTTGATTTGGATGTTGCAGCCTATGTGATGACTGCACAACCCTTTTCATGTTGCCATGTACT-------
----------------------GTATGTAAGTATTCTTGTTGGTGTCTAATCTGGTTTTTGTACTGTAATACTATATGTG
TACTGTAATTCCTTTTGTTTGTGTTCTGTACTGTGTAAATTTTGAGGTTTCACAGTTTCTCGCGAATACGCAAAAATTCT
GTGTATCTTCCTTT---TTTTATGACATCACTGTGTATCTTCCCATTGATATAGAAGGAGAGGTTCGGAGGTTTACACAC
TTGGGATACGTACATACATATACAAATGGAATAACTGAATCGTTTTAGAAGTACACGGGGAGGTACAGTTTCTCCTCA--
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr6D_558
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------GCACCCTAATGAGTAAAGTGCAGTTCATACCGTTCATCTTGGGAGATCGACTGGTTGTTGG
GTTATTGTTAGCTGTCCTACTAGAATACTCAAATTTTGTATTGTTTGTGATGGGTTGAGGACTTGTTG--TGGAGGTCAT
TTTGT--GTAACATATG-TTGTTCAAGGTTCAGAATATGGGTGTGTGGTTATAT-AATCTCTGGTTCAGATG--CCCAAA
GCTTGCTGTAGTTTATTTTGGACGATCTATTTCTCTTTCTTATTACAGGATGTAAAGAACTTGCAAAGAAAGTTTCTTTT
CAGCTATTTTTCCTGTTATGTCCGTTTATGCAATTCGTGTCTT----------------------ACTCGGTGTTTGTTT
TTGCAGGTGGATGCTATTTGCAGGCTGGTA--AAGACAACTAACTTTGTTGATCCTGTGCGCAAGAAGTAATGATCCGGC
CCAGCTCCAAGGAGTCACTTAATTATGACAACAATAGCCAGAAAGTTTATCCTCAACCAATTGATGAAAATATGAATCAG
AACATGGG---------CAGTATGATTGGAAGAATATTCAACAACATATCCTCTTTAAAGGCTGCATACATTCAGCTGCA
GGAAGCTCACACCCCATATGACCCGGACAAGATACAAACTGCTGATAAGCTTGTCATAGATGAGCTCACGAGCCTTTCAG
AACTCAAACATACTTACAGAGAGAGAAATCCTAAGCCAGTAGCAGCATCACCTCAAGATTCACGCTTGCTTTCTGAAATA
CAGGAGCAGCAAAACTTGTTAAAGACGTACGAGGTCATGGTAAAGAAGTTCCAGTCCCAGATCCAGAATAGAGATACTGA
GATTACCCACTTACAGCAGCAAACCGATGAGGCCAAACATCGGAAAACAAAACTGGAGAAGAAATTGAAGCAAAGGGGCT
TACTTAACAAGGAATCAGAGGAATCTGATGAAGAAGAGAGCTATTTCTCTGTTGAGCTGACACCAAGCTTGTTTACATCT
ACTGCTGATAACGCATACCAATCAATACATGAGTTCTCAAAGCCCTTGATCAACATGATGAAAGCTGCAGGTTGGGATCT
TGATGCTGCTGCTAACGCAATTGAACCTGATGTAGTTTACACAAGGAGAGCTCACAAGAAGTATGCATTTGAGTCTTATA
TCTGCCAGAGAATCTTCAGTGGTTTCCATCAAGAGAACTTCTTGATTGACGCTGCTAATGCCACTGTTTCCAATGAGGCT
TTCTTCCATCAATTCCTTGCAGTACGAGCCATGGATCCTTTGGATGTATTGAGCCAAAACCCAGATTCAGTTTTCGGAAA
GTTCTGCAGAAGCAAATACCTACTGCTTGTGCACCCAAAGATGGAAGGTTCTTTCTTCGGCAACATGGATCAGAGAAACT
ACGTCATGAGTGGCGGGCATCCAAGGACACCTTTCTATCAGGCATTTCTCAAGTTGGCGAAGTCCATATGGTTGTTGCAC
AGGCTGGCCTACTCTTTCGACCCAAAGGTCAGGGTCTTCCAAGTGAAGAAGGCAAGCGAGTTCTCAGAGATTCACATGGA
AAGCGTTGTGAAGAACATCGTCTTGGATGAGAATGCCGAGAGGCCTAGAGTCGACTTGATGGTGATGCCTGGTTTCTTGA
TCGGGACTAGCGTCATACAGTCTCGAGTGTACCTTTCTGGTGTAAAGTGTGACGACTGATAAGTGTTAGGGTTGCCTGAG
AAGATTCCGGGCGT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr6B_558
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GCACCCTAATGAGTAAAGTGCAGTTCATACCTTTCATCTTGGGAGATCGACTGGTTGTTGG
GTTATTGTTAGCTGTCCTGCTAGAATACTCAAATCTTGTACTGTTTGTGATGGGTTGAGGACTTGTTG--TGGAGGTCAT
TTTGT--GTAACATATG-TTGTTCAAGGTTCAGAATATGGGTGTGTGGTTATAG-AATCTCTGGTTCAGATG--CCCAAA
GCTTGCTGTAGTTTATTTTGGACGATCTATCTCTCTTTCTTATTA--GGATGTAAATAACTTGCAAAGAAAGTTGCTTTT
CAGCTATTTTTCCTGTTATGTCCGTTTATGCAATTCGTGTCTT----------------------ACTCGGTATTTGTTT
TTTCAGGTGGATGCTATTTGCAGGCTGATA--AAGACAACTAACTTTGTTGATCCTGTGGGCAAGAAGTAATGATCCGAC
CCAGCTCCAAGGAGTCACTTAATTATGACAACAATAGCCAGAAAGTTTATCCTCAACCCATTGATGAAAATATGAATCAG
AACATGGG---------CAGTATGATTGGAAGAATATTCAACAACATATCCTCTTTAAAGGCTGCATACATTCAGCTGCA
GGAAGCTCACACCCCATACGACCCAGACAAGATACAAACTGCTGATAAGCTTGTCATAGATGAGCTCACGAGCCTTTCAG
AACTCAAACATACTTACAGAGAGAGAAATCCTAAGCCAGTGGCAGCATCACCTCAAGATTCACGCTTGCTTTCTGAATTA
CAGGAGCAGCAGAACTTGTTAAAGACATACGAGGTCATGGTAAAGAAGTTCCAGTCCCAGATCCAGAATAGAGATACTGA
GATTACCCACTTACAGCAACAAACCGATGAGGCCAAACATCGGAAAACAAAACTGGAGAAGAAATTGAAACAAAGGGGCT
TACTTAACAAGGAGTCAGAGGAATCTAATGAAGAAGAGAGCTATTTCTCTGTTGAGCTGACACCAAGCTTGTTTACATCT
ACTGCTGATAATGCATACCAATCAATACATGAGTTCTCAAAGCCCTTGATCAACATGATGAAAGCTGCAGGTTGGGATCT
TGATGCTGCTGCTAACGCAATTGAACCTGATGTAGTTTACACAAGGAGAGCTCACAAGAAGTATGCGTTTGAGTCCTATA
TCTGCCAGAGAATCTTCAGTGGTTTCCATCAAGAGAACTTCTCGATCGATGCTGCTAATGTCACTGTTTCCAATGAGGCT
TTCTTCCATCAATTCCTCGCAGTACGAGCCATGGATCCTTTGGATGTATTGAGCCAAAACCCAGATTCAGTTTTCGGAAA
GTTCTGCAGAAGCAAATACCTATTACTTGTGCACCCAAAGATGGAAGGTTCTTTCTTCGGCAACATGGATCAAAGAAACT
ACGTCATGAGTGGCGGGCATCCAAGGACACCTTTCTATCAGGCATTTCTCAAGTTGGCGAAGTCCATATGGTTGTTGCAC
AAGCTGGCCTACTCTTTCGACCCAAAGGTAAGGGTCTTCCAAGTGAAGAAGGCAAGTGAGTTCTCGGAGATTCACATGGA
AAGCGTTGTGAAGAACATCATCTTGGATGAGAATGCCGAGAGGCCTAGAGTCGACTTGATGGTGATGCCTGGTTTCTTGA
TCGGGACTAGCGTCATACAGTCTCGAGTGTACCTTTCTGCTGTAAAGTGTGCCGACTGATAAGTGTTCGGGTTGCCTGAG
AAGATTCCAGG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr6A_558
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GCACCCTAATGAGTAAACTGCAGTTCATACCGTTCATCTTGGGAGATCGACTGGTTGTTGG
GTTATTGTTAGCTGTCCTACTAGAATACTCAAATTTTGTACTGTTTGTGATGTGTTGAGGACTTGCTG--TGGAGGTCAT
TTTGT--GTAACATATA-TTGTTCAAGGTTTAGAATATGGGTGTGTGGTTATAG-AATCTCTGGTTCAGATT--CCCATA
GCTTGCTGTAGTTTATTTTGGATGATCTATTTCTCTTTCTTATTACAGGATGTAAATAACTGGCAAAGAAAGTTGCTTTT
CAGCTAT-TTTCCTGTTATGTCCGTTTATGCAATTCGTGTCTT----------------------ACTCGGTGTTTGTTT
TTGCAGGTGGATGCTATTTGCAGGCTGATA--AAGACAACTAACTTTGTTGATCCTGTGGGCAAGAAGT-ATGATCCGGC
CCAGCTCCAAGGAGTCACTTAATTATGACAACAATAGCCAGAAAGTTTATCCTCAACCCATTGATGAAAATATGAATCAG
AACATGGG---------CAGTATGATTGGAAGAATATTCAACAACATATCCTCTTTAAAGGCTGCATACATTCAGCTGCA
GGAAGCTCACACCCCATACGACCCAGACAAAATACAAACTGCTGATAAGCTTGTCATAGATGAGCTCACAAGCCTTTCAG
AACTCAAACATACTTACAGAGAGAGAAATCCTAAGCCAGTGGCAGCATCACCACAAGATTCACGCTTGCTTTCTGAAATA
CAGGAGCAGCAGAACTTGTTAAAGACATACGAGGTCATGGTAAAGAAGTTCCAGTCCCAGATCCAGAATAGAGATACTGA
GATTATCCACTTACAGCAGCAAACCGATGAGGCCAAACATCGGAAAACAAAACTGGAGAAGAAATTGAAACAAAGGGGCT
TACTTAACAAGGAGTCAGAGGAATCTGATGAAGAAGAGAGCTATTTCTCTGTTGAGCTGACACCAAGCTTGTTTACATCT
ACTGCTGATAATGCATACCAATCAATACATGAGTTCTCAAAGCCCTTGATCAACATGATGAAAGCTGCAGGTTGGGATCT
TGATGCTGCTGCTAACGCGATTGAACCTGATGTAGTTTACACAAGGAGAGCTCACAAGAAGTATGCGTTTGAGTCCTATA
TCTGCCAGAGAATCTTCAGTGGTTTCCATCAAGAGAACTTCTCGATCGATGCTGCTAATGCCACTGTTTCCAATGAGGCT
TTCTTCCATCAATTCCTCGCAGTACGAGCCATGGATCCTTTGGATGTATTGAGCCAAAACCCAGATTCAGTTTTCGGTAA
GTTCTGCAGAAGCAAATACCTATTACTTGTGCACCCAAAGATGGAAGGTTCTTTCTTCGGCAATATGGATCAGAGAAACT
ACGTCATGAGTGGCGGGCATCCAAGGACACCTTTCTATCAGGCATTTCTCAAGTTGGCGAAGTCCATATGGTTGTTGCAC
AGGCTGGCCTACTCTTTCGACCCAAAGGTCAGGGTCTTCCAAGTGAAGAAGGCAAGCGAGTTCTCGGAGATTCACATGGT
AAGTGTTGTGAAGAACATCATCTTGGATGAGAATGCCGAGAGGCCTAGAGTCGACTTGATGGTGATGCCTGGTTTCTTGA
TCGGGACTAGCGTCATACAGTCTCGAGTGTACCTTTCTGGTGTGAAGTGTGCCGACTAATAAGTGTTAGGGTTGCCTGAG
AAGATTCCGGGCGTTT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>SNPs
----------SS---S--S-----S---------------S--------------SS------S-S-----------SSS
-----SSS------------S-------S-------------------SS-----------------S-SS---------
----------------S-------S--------S------------------S---------------------------
-------S------------------------------S------S--------------SS------------------
-------S--S---------------------------------------------S---------------------S-
--S--------------------------S-----------------SS---------------------S---------
-----S----------------------------------------------S--------------S------------
----------S-----------S--------S------------------------------------------S-----
------S--------------------------------S-----------S--S---------S---------------
-----SS----------S----------------S---------------------------------------S-----
------------S--------------------------------------------------S----------------
-------------------------------------S-----------------S------------------------
--------S-----------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-------------------------------------------------------------S------------------
---S----------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-S-----------------------------------------------------------------S------------
--------------------------------------------------------------------S-----------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S-----------S------------------
-----------S----------S----------------------------------------S---S-------S----
--SSSSSSSS----------S-----S-----------------------S-----------S-----------------
--------------S-------------------------------S------S--SS----------------------
--------------------------------------------S-----------------------SS-SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS--------------S-S---------------S------------------S------
S------------------------S-------S---------------------------------------SSS--S-
-----------SSSSSS------S-----------------S--------------S--------S-S-----------S
-------------------------------------------------S--------S-------------------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_286
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TGTGCCGAGACTGTGATTGG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_2290
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGCTGACTGAAAGTGTTGCA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_1279
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ATGAGCTCACGAGGCTTTCT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>reverse_3155
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CAACACGCGTGGGTCAATTT--------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
