Multiple sequence alignment - TraesCS4B01G132500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G132500 chr4B 100.000 3647 0 0 1 3647 172500098 172503744 0.000000e+00 6735.0
1 TraesCS4B01G132500 chr4B 93.023 43 2 1 3095 3137 639455533 639455492 1.090000e-05 62.1
2 TraesCS4B01G132500 chr4D 88.384 1894 110 24 718 2526 111933160 111935028 0.000000e+00 2178.0
3 TraesCS4B01G132500 chr4D 88.402 1871 107 23 745 2529 109279360 109277514 0.000000e+00 2152.0
4 TraesCS4B01G132500 chr4D 86.344 454 27 10 2426 2852 109277737 109277292 2.570000e-126 462.0
5 TraesCS4B01G132500 chr4D 81.733 531 32 15 2423 2918 111934805 111935305 2.050000e-102 383.0
6 TraesCS4B01G132500 chr4D 76.970 495 46 26 3169 3639 111935478 111935928 1.700000e-53 220.0
7 TraesCS4B01G132500 chr4A 87.959 1852 112 30 651 2416 465414481 465412655 0.000000e+00 2082.0
8 TraesCS4B01G132500 chr4A 81.988 644 63 22 2467 3092 465412823 465412215 7.030000e-137 497.0
9 TraesCS4B01G132500 chr4A 81.020 490 45 19 3171 3639 465412160 465411698 2.700000e-91 346.0
10 TraesCS4B01G132500 chr4A 80.886 429 47 18 1 398 465415427 465415003 4.580000e-79 305.0
11 TraesCS4B01G132500 chr4A 89.904 208 21 0 476 683 465414998 465414791 6.000000e-68 268.0
12 TraesCS4B01G132500 chr4A 89.865 148 9 2 2668 2809 467236248 467236395 6.220000e-43 185.0
13 TraesCS4B01G132500 chr1D 98.571 70 1 0 403 472 221922526 221922595 1.380000e-24 124.0
14 TraesCS4B01G132500 chr3B 95.714 70 3 0 403 472 119421622 119421691 2.980000e-21 113.0
15 TraesCS4B01G132500 chr3B 75.758 132 30 2 547 677 5485633 5485763 8.450000e-07 65.8
16 TraesCS4B01G132500 chr3B 88.462 52 4 1 3093 3144 11070027 11069978 1.090000e-05 62.1
17 TraesCS4B01G132500 chr3B 87.037 54 1 4 3094 3147 132400497 132400450 5.090000e-04 56.5
18 TraesCS4B01G132500 chr2A 95.238 63 3 0 410 472 601333015 601333077 2.320000e-17 100.0
19 TraesCS4B01G132500 chr2A 78.632 117 23 2 550 665 367007433 367007318 3.910000e-10 76.8
20 TraesCS4B01G132500 chr2A 78.378 111 24 0 552 662 366996084 366995974 5.050000e-09 73.1
21 TraesCS4B01G132500 chr2A 75.676 148 30 6 550 693 366998455 366998310 6.530000e-08 69.4
22 TraesCS4B01G132500 chr7A 78.710 155 25 7 551 701 732939053 732939203 3.000000e-16 97.1
23 TraesCS4B01G132500 chr6A 77.099 131 30 0 547 677 10029231 10029361 3.910000e-10 76.8
24 TraesCS4B01G132500 chr1B 77.099 131 30 0 547 677 684584344 684584474 3.910000e-10 76.8
25 TraesCS4B01G132500 chr3D 76.596 141 29 4 566 704 593330882 593331020 1.400000e-09 75.0
26 TraesCS4B01G132500 chr5D 97.368 38 1 0 3090 3127 438782915 438782952 8.450000e-07 65.8
27 TraesCS4B01G132500 chr5B 95.122 41 2 0 3090 3130 440023169 440023209 8.450000e-07 65.8
28 TraesCS4B01G132500 chr5B 93.023 43 1 2 3093 3134 17982634 17982593 1.090000e-05 62.1
29 TraesCS4B01G132500 chrUn 93.182 44 2 1 3090 3133 30123159 30123201 3.040000e-06 63.9
30 TraesCS4B01G132500 chr6B 92.500 40 3 0 3090 3129 501774005 501774044 1.410000e-04 58.4
31 TraesCS4B01G132500 chr1A 86.792 53 6 1 3093 3144 440885304 440885252 1.410000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G132500 chr4B 172500098 172503744 3646 False 6735.0 6735 100.000000 1 3647 1 chr4B.!!$F1 3646
1 TraesCS4B01G132500 chr4D 109277292 109279360 2068 True 1307.0 2152 87.373000 745 2852 2 chr4D.!!$R1 2107
2 TraesCS4B01G132500 chr4D 111933160 111935928 2768 False 927.0 2178 82.362333 718 3639 3 chr4D.!!$F1 2921
3 TraesCS4B01G132500 chr4A 465411698 465415427 3729 True 699.6 2082 84.351400 1 3639 5 chr4A.!!$R1 3638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
344 374 0.100325 CAGATAAATTGGCCGCGCAA 59.900 50.0 8.75 0.0 0.0 4.85 F
345 375 0.100503 AGATAAATTGGCCGCGCAAC 59.899 50.0 8.75 0.0 0.0 4.17 F
2311 2817 0.105760 AGATGGCGATGAGGAGGAGT 60.106 55.0 0.00 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2342 2848 0.039180 TTCCGTCTCCTCTGGTGCTA 59.961 55.000 0.0 0.0 0.0 3.49 R
2344 2850 1.216710 CTTCCGTCTCCTCTGGTGC 59.783 63.158 0.0 0.0 0.0 5.01 R
3152 3832 0.107017 CCTACTCCCTCCGTTCCGTA 60.107 60.000 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.640771 ACAGAAAAATGGGTAGCAGAGA 57.359 40.909 0.00 0.00 0.00 3.10
23 24 4.985538 ACAGAAAAATGGGTAGCAGAGAA 58.014 39.130 0.00 0.00 0.00 2.87
27 28 6.642540 CAGAAAAATGGGTAGCAGAGAAAAAC 59.357 38.462 0.00 0.00 0.00 2.43
31 32 6.478512 AATGGGTAGCAGAGAAAAACAAAA 57.521 33.333 0.00 0.00 0.00 2.44
32 33 5.923733 TGGGTAGCAGAGAAAAACAAAAA 57.076 34.783 0.00 0.00 0.00 1.94
106 107 2.479566 TCAGATGGGAAGCAGTGAAC 57.520 50.000 0.00 0.00 0.00 3.18
117 118 4.261197 GGAAGCAGTGAACGAGACAAAATT 60.261 41.667 0.00 0.00 0.00 1.82
119 120 6.348540 GGAAGCAGTGAACGAGACAAAATTAT 60.349 38.462 0.00 0.00 0.00 1.28
149 150 4.272018 CCTATCTGAGTTTGAGCAAATCCG 59.728 45.833 0.00 0.00 32.36 4.18
153 154 4.761739 TCTGAGTTTGAGCAAATCCGAAAT 59.238 37.500 0.00 0.00 32.36 2.17
155 156 6.092670 TCTGAGTTTGAGCAAATCCGAAATAG 59.907 38.462 0.00 0.00 32.36 1.73
157 158 6.429692 TGAGTTTGAGCAAATCCGAAATAGAA 59.570 34.615 0.00 0.00 32.36 2.10
161 162 8.427774 GTTTGAGCAAATCCGAAATAGAAAAAG 58.572 33.333 0.00 0.00 32.36 2.27
163 164 7.530010 TGAGCAAATCCGAAATAGAAAAAGAG 58.470 34.615 0.00 0.00 0.00 2.85
195 196 3.964411 AGGGAAGGAAACCGGAATAAAG 58.036 45.455 9.46 0.00 0.00 1.85
198 199 3.128764 GGAAGGAAACCGGAATAAAGCAG 59.871 47.826 9.46 0.00 0.00 4.24
262 278 4.230657 GACATACATGCACTCTATCCGAC 58.769 47.826 0.00 0.00 0.00 4.79
263 279 3.005897 ACATACATGCACTCTATCCGACC 59.994 47.826 0.00 0.00 0.00 4.79
290 309 2.625790 GGGCAAGAGATCGATCTGTACT 59.374 50.000 31.88 19.48 37.25 2.73
295 314 4.909696 AGAGATCGATCTGTACTTGTGG 57.090 45.455 31.88 0.00 37.25 4.17
296 315 3.634448 AGAGATCGATCTGTACTTGTGGG 59.366 47.826 31.88 0.00 37.25 4.61
297 316 2.101582 AGATCGATCTGTACTTGTGGGC 59.898 50.000 26.78 0.00 35.42 5.36
298 317 0.535335 TCGATCTGTACTTGTGGGCC 59.465 55.000 0.00 0.00 0.00 5.80
299 318 0.537188 CGATCTGTACTTGTGGGCCT 59.463 55.000 4.53 0.00 0.00 5.19
300 319 1.754803 CGATCTGTACTTGTGGGCCTA 59.245 52.381 4.53 0.00 0.00 3.93
301 320 2.365617 CGATCTGTACTTGTGGGCCTAT 59.634 50.000 4.53 0.00 0.00 2.57
302 321 3.572682 CGATCTGTACTTGTGGGCCTATA 59.427 47.826 4.53 0.00 0.00 1.31
303 322 4.038763 CGATCTGTACTTGTGGGCCTATAA 59.961 45.833 4.53 0.00 0.00 0.98
313 343 6.152154 ACTTGTGGGCCTATAATACAACAAAC 59.848 38.462 4.53 0.00 0.00 2.93
316 346 5.883673 GTGGGCCTATAATACAACAAACAGA 59.116 40.000 4.53 0.00 0.00 3.41
317 347 6.546034 GTGGGCCTATAATACAACAAACAGAT 59.454 38.462 4.53 0.00 0.00 2.90
340 370 2.923020 CACAAACAGATAAATTGGCCGC 59.077 45.455 0.00 0.00 0.00 6.53
344 374 0.100325 CAGATAAATTGGCCGCGCAA 59.900 50.000 8.75 0.00 0.00 4.85
345 375 0.100503 AGATAAATTGGCCGCGCAAC 59.899 50.000 8.75 0.00 0.00 4.17
348 378 2.515947 TAAATTGGCCGCGCAACGTC 62.516 55.000 8.75 0.00 41.42 4.34
363 393 3.450115 GTCGCTCTACCGGCCTGT 61.450 66.667 0.00 4.79 0.00 4.00
364 394 2.117156 GTCGCTCTACCGGCCTGTA 61.117 63.158 0.00 6.85 0.00 2.74
375 405 1.524863 CGGCCTGTAGGTAGGATCGG 61.525 65.000 0.00 0.00 40.42 4.18
378 408 0.822532 CCTGTAGGTAGGATCGGCGT 60.823 60.000 6.85 0.00 40.42 5.68
380 410 0.742505 TGTAGGTAGGATCGGCGTTG 59.257 55.000 6.85 0.00 0.00 4.10
407 437 4.974591 CTGGTAGAGCAACATGTTTTAGC 58.025 43.478 8.77 9.83 0.00 3.09
408 438 4.651778 TGGTAGAGCAACATGTTTTAGCT 58.348 39.130 18.74 18.74 38.43 3.32
409 439 4.455533 TGGTAGAGCAACATGTTTTAGCTG 59.544 41.667 22.41 7.51 35.36 4.24
410 440 4.455877 GGTAGAGCAACATGTTTTAGCTGT 59.544 41.667 22.41 20.49 35.36 4.40
411 441 5.048713 GGTAGAGCAACATGTTTTAGCTGTT 60.049 40.000 22.41 14.18 35.36 3.16
412 442 5.520376 AGAGCAACATGTTTTAGCTGTTT 57.480 34.783 22.41 8.54 35.36 2.83
413 443 5.284079 AGAGCAACATGTTTTAGCTGTTTG 58.716 37.500 22.41 4.78 35.36 2.93
414 444 5.009854 AGCAACATGTTTTAGCTGTTTGT 57.990 34.783 18.17 0.00 33.67 2.83
415 445 5.418676 AGCAACATGTTTTAGCTGTTTGTT 58.581 33.333 18.17 0.00 33.67 2.83
416 446 5.874261 AGCAACATGTTTTAGCTGTTTGTTT 59.126 32.000 18.17 0.00 33.67 2.83
417 447 6.035975 AGCAACATGTTTTAGCTGTTTGTTTC 59.964 34.615 18.17 0.00 33.67 2.78
418 448 6.183360 GCAACATGTTTTAGCTGTTTGTTTCA 60.183 34.615 8.77 0.00 30.99 2.69
419 449 7.393327 CAACATGTTTTAGCTGTTTGTTTCAG 58.607 34.615 8.77 0.00 30.99 3.02
432 462 8.445193 CTGTTTGTTTCAGCTTCAGATTAATC 57.555 34.615 7.41 7.41 0.00 1.75
433 463 7.370383 TGTTTGTTTCAGCTTCAGATTAATCC 58.630 34.615 11.92 0.00 0.00 3.01
434 464 7.231317 TGTTTGTTTCAGCTTCAGATTAATCCT 59.769 33.333 11.92 0.00 0.00 3.24
435 465 8.730680 GTTTGTTTCAGCTTCAGATTAATCCTA 58.269 33.333 11.92 0.00 0.00 2.94
436 466 9.466497 TTTGTTTCAGCTTCAGATTAATCCTAT 57.534 29.630 11.92 0.00 0.00 2.57
437 467 8.668510 TGTTTCAGCTTCAGATTAATCCTATC 57.331 34.615 11.92 0.00 0.00 2.08
438 468 8.267183 TGTTTCAGCTTCAGATTAATCCTATCA 58.733 33.333 11.92 0.00 0.00 2.15
439 469 9.113838 GTTTCAGCTTCAGATTAATCCTATCAA 57.886 33.333 11.92 0.00 0.00 2.57
440 470 9.685276 TTTCAGCTTCAGATTAATCCTATCAAA 57.315 29.630 11.92 0.00 0.00 2.69
441 471 9.685276 TTCAGCTTCAGATTAATCCTATCAAAA 57.315 29.630 11.92 0.00 0.00 2.44
442 472 9.857656 TCAGCTTCAGATTAATCCTATCAAAAT 57.142 29.630 11.92 0.00 0.00 1.82
447 477 8.627208 TCAGATTAATCCTATCAAAATCTGCC 57.373 34.615 11.92 0.00 46.76 4.85
448 478 8.443176 TCAGATTAATCCTATCAAAATCTGCCT 58.557 33.333 11.92 0.00 46.76 4.75
449 479 9.075678 CAGATTAATCCTATCAAAATCTGCCTT 57.924 33.333 11.92 0.00 43.66 4.35
463 493 9.859427 CAAAATCTGCCTTATAAATCTGAAACA 57.141 29.630 0.00 0.00 0.00 2.83
466 496 9.860898 AATCTGCCTTATAAATCTGAAACAAAC 57.139 29.630 0.00 0.00 0.00 2.93
467 497 8.402798 TCTGCCTTATAAATCTGAAACAAACA 57.597 30.769 0.00 0.00 0.00 2.83
468 498 8.514594 TCTGCCTTATAAATCTGAAACAAACAG 58.485 33.333 0.00 0.00 36.80 3.16
469 499 7.601856 TGCCTTATAAATCTGAAACAAACAGG 58.398 34.615 0.00 0.00 36.22 4.00
470 500 7.035612 GCCTTATAAATCTGAAACAAACAGGG 58.964 38.462 0.00 0.00 36.22 4.45
471 501 7.035612 CCTTATAAATCTGAAACAAACAGGGC 58.964 38.462 0.00 0.00 36.22 5.19
472 502 7.309744 CCTTATAAATCTGAAACAAACAGGGCA 60.310 37.037 0.00 0.00 36.22 5.36
473 503 4.961438 AAATCTGAAACAAACAGGGCAT 57.039 36.364 0.00 0.00 36.22 4.40
474 504 7.716799 ATAAATCTGAAACAAACAGGGCATA 57.283 32.000 0.00 0.00 36.22 3.14
479 509 4.892433 TGAAACAAACAGGGCATAATTGG 58.108 39.130 0.00 0.00 0.00 3.16
488 518 3.253188 CAGGGCATAATTGGACGGTAATG 59.747 47.826 0.00 0.00 0.00 1.90
491 521 2.030274 GCATAATTGGACGGTAATGGGC 60.030 50.000 0.00 0.00 0.00 5.36
505 535 3.845781 AATGGGCGTGAATGAGAGTAT 57.154 42.857 0.00 0.00 0.00 2.12
510 540 3.376540 GGCGTGAATGAGAGTATGAGAC 58.623 50.000 0.00 0.00 0.00 3.36
529 559 3.767673 AGACGATACTAAAGCTCACCCAA 59.232 43.478 0.00 0.00 0.00 4.12
589 619 8.755028 TGCTATGACAAAATAGTGTAGTCCTTA 58.245 33.333 0.00 0.00 33.42 2.69
604 634 8.697960 GTGTAGTCCTTAAAATACGCTATTAGC 58.302 37.037 5.56 5.56 38.02 3.09
615 645 6.716934 ATACGCTATTAGCATGCTATACCT 57.283 37.500 27.35 14.73 42.58 3.08
616 646 5.407407 ACGCTATTAGCATGCTATACCTT 57.593 39.130 27.35 12.64 42.58 3.50
617 647 6.525578 ACGCTATTAGCATGCTATACCTTA 57.474 37.500 27.35 12.39 42.58 2.69
709 1081 1.745768 GCTATTACCGACGCGCGTTT 61.746 55.000 38.03 25.23 38.67 3.60
744 1116 5.890985 TGGTTTTACCACATCCATATGAAGG 59.109 40.000 3.65 1.12 44.79 3.46
766 1138 5.413523 AGGAAAAAGTGTTACGTTCTTGTGT 59.586 36.000 0.00 0.00 0.00 3.72
814 1186 3.118775 ACTGGAATCGGAATCGTGAATCA 60.119 43.478 0.00 0.00 37.69 2.57
816 1188 2.544267 GGAATCGGAATCGTGAATCACC 59.456 50.000 7.91 0.00 37.69 4.02
817 1189 2.979814 ATCGGAATCGTGAATCACCA 57.020 45.000 7.91 0.00 37.69 4.17
818 1190 2.004583 TCGGAATCGTGAATCACCAC 57.995 50.000 7.91 0.00 37.69 4.16
829 1201 3.252215 GTGAATCACCACGGAACAAATCA 59.748 43.478 1.10 0.00 0.00 2.57
830 1202 3.885901 TGAATCACCACGGAACAAATCAA 59.114 39.130 0.00 0.00 0.00 2.57
860 1232 3.307782 CGTTTTCATATACACCACGGACC 59.692 47.826 0.00 0.00 0.00 4.46
902 1274 4.171103 ACCCGCCTTCCCATACGC 62.171 66.667 0.00 0.00 0.00 4.42
907 1279 4.929707 CCTTCCCATACGCCCGCC 62.930 72.222 0.00 0.00 0.00 6.13
908 1280 4.929707 CTTCCCATACGCCCGCCC 62.930 72.222 0.00 0.00 0.00 6.13
928 1300 1.409802 CCGAGCTGACCTACCTTCCTA 60.410 57.143 0.00 0.00 0.00 2.94
965 1337 4.016706 CCCACCGGCGAAACCTCT 62.017 66.667 9.30 0.00 35.61 3.69
967 1339 2.342279 CACCGGCGAAACCTCTCA 59.658 61.111 9.30 0.00 35.61 3.27
968 1340 1.301401 CACCGGCGAAACCTCTCAA 60.301 57.895 9.30 0.00 35.61 3.02
969 1341 1.004918 ACCGGCGAAACCTCTCAAG 60.005 57.895 9.30 0.00 35.61 3.02
970 1342 1.004918 CCGGCGAAACCTCTCAAGT 60.005 57.895 9.30 0.00 35.61 3.16
971 1343 1.014564 CCGGCGAAACCTCTCAAGTC 61.015 60.000 9.30 0.00 35.61 3.01
1049 1428 2.038269 GGATGCGCTTCAACCCGAA 61.038 57.895 22.93 0.00 31.94 4.30
1069 1448 3.207669 GCGAGGAGGCCATTGCTG 61.208 66.667 5.01 0.00 37.74 4.41
1093 1472 3.746949 CTCGTGCCATGGCTCCTCC 62.747 68.421 35.53 17.34 42.51 4.30
1227 1609 3.832237 CTTCACCACCTGCAGGCGT 62.832 63.158 33.06 24.94 39.32 5.68
1350 1732 1.925185 GGATACCACGAGAAACTTCGC 59.075 52.381 0.00 0.00 44.15 4.70
1355 1737 1.400629 CCACGAGAAACTTCGCTACGA 60.401 52.381 0.00 0.00 44.15 3.43
1401 1783 1.683917 GAGTGGCTCATGGACGAGTAT 59.316 52.381 0.00 0.00 35.33 2.12
1591 1986 0.842905 TGGAATTCAAGGACCCCCGA 60.843 55.000 7.93 0.00 37.58 5.14
1741 2172 2.046507 CCTCTGCCACTGCCAGTC 60.047 66.667 0.00 0.00 36.33 3.51
1749 2180 3.241530 ACTGCCAGTCCGAAGCCA 61.242 61.111 0.00 0.00 0.00 4.75
1872 2315 1.446099 GATGACGAAGCCAGCGACA 60.446 57.895 0.00 0.00 37.75 4.35
1905 2348 0.882927 CTCTTTCGTCGGGGCAACAA 60.883 55.000 0.00 0.00 39.74 2.83
1906 2349 1.161563 TCTTTCGTCGGGGCAACAAC 61.162 55.000 0.00 0.00 39.74 3.32
1907 2350 1.440938 CTTTCGTCGGGGCAACAACA 61.441 55.000 0.00 0.00 39.74 3.33
1912 2355 2.192861 TCGGGGCAACAACAGCAAG 61.193 57.895 0.00 0.00 39.74 4.01
2060 2542 2.656646 CGCAGCACCACCTAGACA 59.343 61.111 0.00 0.00 0.00 3.41
2070 2552 3.967326 CACCACCTAGACAATCCATCCTA 59.033 47.826 0.00 0.00 0.00 2.94
2186 2692 2.202987 GGGCCAGAGCACGATCAG 60.203 66.667 4.39 0.00 42.56 2.90
2192 2698 0.108472 CAGAGCACGATCAGGCAAGA 60.108 55.000 8.16 0.00 0.00 3.02
2311 2817 0.105760 AGATGGCGATGAGGAGGAGT 60.106 55.000 0.00 0.00 0.00 3.85
2312 2818 0.755686 GATGGCGATGAGGAGGAGTT 59.244 55.000 0.00 0.00 0.00 3.01
2313 2819 1.139853 GATGGCGATGAGGAGGAGTTT 59.860 52.381 0.00 0.00 0.00 2.66
2314 2820 0.250234 TGGCGATGAGGAGGAGTTTG 59.750 55.000 0.00 0.00 0.00 2.93
2315 2821 1.092345 GGCGATGAGGAGGAGTTTGC 61.092 60.000 0.00 0.00 0.00 3.68
2316 2822 1.424493 GCGATGAGGAGGAGTTTGCG 61.424 60.000 0.00 0.00 0.00 4.85
2317 2823 0.173481 CGATGAGGAGGAGTTTGCGA 59.827 55.000 0.00 0.00 0.00 5.10
2318 2824 1.800655 CGATGAGGAGGAGTTTGCGAG 60.801 57.143 0.00 0.00 0.00 5.03
2319 2825 0.539051 ATGAGGAGGAGTTTGCGAGG 59.461 55.000 0.00 0.00 0.00 4.63
2320 2826 0.832135 TGAGGAGGAGTTTGCGAGGT 60.832 55.000 0.00 0.00 0.00 3.85
2321 2827 0.321996 GAGGAGGAGTTTGCGAGGTT 59.678 55.000 0.00 0.00 0.00 3.50
2322 2828 0.765510 AGGAGGAGTTTGCGAGGTTT 59.234 50.000 0.00 0.00 0.00 3.27
2323 2829 1.143073 AGGAGGAGTTTGCGAGGTTTT 59.857 47.619 0.00 0.00 0.00 2.43
2324 2830 1.954382 GGAGGAGTTTGCGAGGTTTTT 59.046 47.619 0.00 0.00 0.00 1.94
2325 2831 2.287608 GGAGGAGTTTGCGAGGTTTTTG 60.288 50.000 0.00 0.00 0.00 2.44
2326 2832 1.681264 AGGAGTTTGCGAGGTTTTTGG 59.319 47.619 0.00 0.00 0.00 3.28
2327 2833 1.679153 GGAGTTTGCGAGGTTTTTGGA 59.321 47.619 0.00 0.00 0.00 3.53
2328 2834 2.296190 GGAGTTTGCGAGGTTTTTGGAT 59.704 45.455 0.00 0.00 0.00 3.41
2329 2835 3.308530 GAGTTTGCGAGGTTTTTGGATG 58.691 45.455 0.00 0.00 0.00 3.51
2330 2836 2.955660 AGTTTGCGAGGTTTTTGGATGA 59.044 40.909 0.00 0.00 0.00 2.92
2331 2837 3.049912 GTTTGCGAGGTTTTTGGATGAC 58.950 45.455 0.00 0.00 0.00 3.06
2332 2838 0.871722 TGCGAGGTTTTTGGATGACG 59.128 50.000 0.00 0.00 0.00 4.35
2333 2839 0.872388 GCGAGGTTTTTGGATGACGT 59.128 50.000 0.00 0.00 0.00 4.34
2334 2840 1.399727 GCGAGGTTTTTGGATGACGTG 60.400 52.381 0.00 0.00 0.00 4.49
2335 2841 1.399727 CGAGGTTTTTGGATGACGTGC 60.400 52.381 0.00 0.00 0.00 5.34
2336 2842 1.880027 GAGGTTTTTGGATGACGTGCT 59.120 47.619 0.00 0.00 0.00 4.40
2337 2843 2.293399 GAGGTTTTTGGATGACGTGCTT 59.707 45.455 0.00 0.00 0.00 3.91
2338 2844 2.034558 AGGTTTTTGGATGACGTGCTTG 59.965 45.455 0.00 0.00 0.00 4.01
2339 2845 2.034053 GGTTTTTGGATGACGTGCTTGA 59.966 45.455 0.00 0.00 0.00 3.02
2340 2846 3.490078 GGTTTTTGGATGACGTGCTTGAA 60.490 43.478 0.00 0.00 0.00 2.69
2341 2847 3.624326 TTTTGGATGACGTGCTTGAAG 57.376 42.857 0.00 0.00 0.00 3.02
2342 2848 2.254546 TTGGATGACGTGCTTGAAGT 57.745 45.000 0.00 0.00 0.00 3.01
2343 2849 3.394674 TTGGATGACGTGCTTGAAGTA 57.605 42.857 0.00 0.00 0.00 2.24
2344 2850 2.959516 TGGATGACGTGCTTGAAGTAG 58.040 47.619 0.00 0.00 0.00 2.57
2345 2851 1.661112 GGATGACGTGCTTGAAGTAGC 59.339 52.381 0.00 0.00 41.59 3.58
2352 2858 2.462456 TGCTTGAAGTAGCACCAGAG 57.538 50.000 0.00 0.00 45.72 3.35
2353 2859 1.002430 TGCTTGAAGTAGCACCAGAGG 59.998 52.381 0.00 0.00 45.72 3.69
2354 2860 1.276421 GCTTGAAGTAGCACCAGAGGA 59.724 52.381 0.00 0.00 40.89 3.71
2355 2861 2.676463 GCTTGAAGTAGCACCAGAGGAG 60.676 54.545 0.00 0.00 40.89 3.69
2356 2862 2.604912 TGAAGTAGCACCAGAGGAGA 57.395 50.000 0.00 0.00 0.00 3.71
2357 2863 2.171840 TGAAGTAGCACCAGAGGAGAC 58.828 52.381 0.00 0.00 0.00 3.36
2358 2864 1.133407 GAAGTAGCACCAGAGGAGACG 59.867 57.143 0.00 0.00 0.00 4.18
2359 2865 0.681564 AGTAGCACCAGAGGAGACGG 60.682 60.000 0.00 0.00 0.00 4.79
2360 2866 0.680280 GTAGCACCAGAGGAGACGGA 60.680 60.000 0.00 0.00 0.00 4.69
2361 2867 0.039180 TAGCACCAGAGGAGACGGAA 59.961 55.000 0.00 0.00 0.00 4.30
2362 2868 1.216710 GCACCAGAGGAGACGGAAG 59.783 63.158 0.00 0.00 0.00 3.46
2363 2869 1.251527 GCACCAGAGGAGACGGAAGA 61.252 60.000 0.00 0.00 0.00 2.87
2364 2870 0.528470 CACCAGAGGAGACGGAAGAC 59.472 60.000 0.00 0.00 0.00 3.01
2382 2888 2.209838 ACGTAGACGGCAAGATCATG 57.790 50.000 7.04 0.00 44.95 3.07
2383 2889 0.855349 CGTAGACGGCAAGATCATGC 59.145 55.000 14.46 14.46 45.67 4.06
2394 2900 3.308866 GCAAGATCATGCAAAAAGATGGC 59.691 43.478 17.64 0.00 45.70 4.40
2395 2901 3.431922 AGATCATGCAAAAAGATGGCG 57.568 42.857 0.00 0.00 0.00 5.69
2396 2902 3.018856 AGATCATGCAAAAAGATGGCGA 58.981 40.909 0.00 0.00 0.00 5.54
2397 2903 3.635373 AGATCATGCAAAAAGATGGCGAT 59.365 39.130 0.00 0.00 0.00 4.58
2398 2904 4.823442 AGATCATGCAAAAAGATGGCGATA 59.177 37.500 0.00 0.00 0.00 2.92
2399 2905 4.979943 TCATGCAAAAAGATGGCGATAA 57.020 36.364 0.00 0.00 0.00 1.75
2400 2906 4.923893 TCATGCAAAAAGATGGCGATAAG 58.076 39.130 0.00 0.00 0.00 1.73
2401 2907 3.781079 TGCAAAAAGATGGCGATAAGG 57.219 42.857 0.00 0.00 0.00 2.69
2402 2908 3.351740 TGCAAAAAGATGGCGATAAGGA 58.648 40.909 0.00 0.00 0.00 3.36
2403 2909 3.378112 TGCAAAAAGATGGCGATAAGGAG 59.622 43.478 0.00 0.00 0.00 3.69
2404 2910 3.243201 GCAAAAAGATGGCGATAAGGAGG 60.243 47.826 0.00 0.00 0.00 4.30
2405 2911 4.199310 CAAAAAGATGGCGATAAGGAGGA 58.801 43.478 0.00 0.00 0.00 3.71
2406 2912 3.760580 AAAGATGGCGATAAGGAGGAG 57.239 47.619 0.00 0.00 0.00 3.69
2407 2913 1.638529 AGATGGCGATAAGGAGGAGG 58.361 55.000 0.00 0.00 0.00 4.30
2408 2914 1.148027 AGATGGCGATAAGGAGGAGGA 59.852 52.381 0.00 0.00 0.00 3.71
2409 2915 1.548269 GATGGCGATAAGGAGGAGGAG 59.452 57.143 0.00 0.00 0.00 3.69
2410 2916 1.115930 TGGCGATAAGGAGGAGGAGC 61.116 60.000 0.00 0.00 0.00 4.70
2411 2917 1.115930 GGCGATAAGGAGGAGGAGCA 61.116 60.000 0.00 0.00 0.00 4.26
2412 2918 0.316841 GCGATAAGGAGGAGGAGCAG 59.683 60.000 0.00 0.00 0.00 4.24
2413 2919 0.965439 CGATAAGGAGGAGGAGCAGG 59.035 60.000 0.00 0.00 0.00 4.85
2414 2920 1.479573 CGATAAGGAGGAGGAGCAGGA 60.480 57.143 0.00 0.00 0.00 3.86
2415 2921 2.247358 GATAAGGAGGAGGAGCAGGAG 58.753 57.143 0.00 0.00 0.00 3.69
2416 2922 0.263172 TAAGGAGGAGGAGCAGGAGG 59.737 60.000 0.00 0.00 0.00 4.30
2417 2923 1.522917 AAGGAGGAGGAGCAGGAGGA 61.523 60.000 0.00 0.00 0.00 3.71
2418 2924 1.457455 GGAGGAGGAGCAGGAGGAG 60.457 68.421 0.00 0.00 0.00 3.69
2419 2925 1.457455 GAGGAGGAGCAGGAGGAGG 60.457 68.421 0.00 0.00 0.00 4.30
2420 2926 2.445654 GGAGGAGCAGGAGGAGGG 60.446 72.222 0.00 0.00 0.00 4.30
2421 2927 3.160748 GAGGAGCAGGAGGAGGGC 61.161 72.222 0.00 0.00 0.00 5.19
2424 2930 3.844090 GAGCAGGAGGAGGGCGAC 61.844 72.222 0.00 0.00 0.00 5.19
2427 2933 3.827898 CAGGAGGAGGGCGACGAC 61.828 72.222 0.00 0.00 0.00 4.34
2447 2953 1.004918 ACTTCGCGAGGTTCTTGGG 60.005 57.895 19.10 0.01 0.00 4.12
2514 3140 1.002624 GGCCGACCAACAAGATGGA 60.003 57.895 3.18 0.00 43.54 3.41
2515 3141 1.026718 GGCCGACCAACAAGATGGAG 61.027 60.000 3.18 0.00 43.54 3.86
2516 3142 0.036388 GCCGACCAACAAGATGGAGA 60.036 55.000 3.18 0.00 43.54 3.71
2550 3197 1.885560 TCGCGAGGTTTTTGGATGAA 58.114 45.000 3.71 0.00 0.00 2.57
2561 3208 5.463392 GGTTTTTGGATGAAGAGCTTGAAAC 59.537 40.000 0.00 0.00 0.00 2.78
2565 3212 2.816087 GGATGAAGAGCTTGAAACAGCA 59.184 45.455 0.00 0.00 42.84 4.41
2626 3277 1.005156 GATGGCGATGAGGAGGAGC 60.005 63.158 0.00 0.00 0.00 4.70
2658 3315 3.343617 CTTGTGGTGATGGATACGGTTT 58.656 45.455 0.00 0.00 42.51 3.27
2714 3377 1.536284 GGCATGCGAGGTCACTAGTAC 60.536 57.143 12.44 0.00 0.00 2.73
2716 3379 2.541999 GCATGCGAGGTCACTAGTACTC 60.542 54.545 0.00 3.26 0.00 2.59
2723 3386 5.049167 CGAGGTCACTAGTACTCGTAGAAT 58.951 45.833 24.31 1.09 45.48 2.40
2764 3430 5.463724 GTGATGAGTAGCTAGGATTTTTCCG 59.536 44.000 0.00 0.00 34.28 4.30
2773 3439 4.438336 GCTAGGATTTTTCCGTTAGTTGGC 60.438 45.833 0.00 0.00 34.28 4.52
2795 3461 4.865365 GCATACTCTTCACTGTAACAGTCC 59.135 45.833 0.00 0.00 43.43 3.85
2813 3479 3.321111 AGTCCGAGACTGAAGCTTGTAAA 59.679 43.478 2.10 0.00 41.76 2.01
2814 3480 3.429207 GTCCGAGACTGAAGCTTGTAAAC 59.571 47.826 2.10 0.00 0.00 2.01
2816 3482 3.997021 CCGAGACTGAAGCTTGTAAACAT 59.003 43.478 2.10 0.00 0.00 2.71
2817 3483 5.047590 TCCGAGACTGAAGCTTGTAAACATA 60.048 40.000 2.10 0.00 0.00 2.29
2818 3484 5.812642 CCGAGACTGAAGCTTGTAAACATAT 59.187 40.000 2.10 0.00 0.00 1.78
2819 3485 6.978659 CCGAGACTGAAGCTTGTAAACATATA 59.021 38.462 2.10 0.00 0.00 0.86
2820 3486 7.653713 CCGAGACTGAAGCTTGTAAACATATAT 59.346 37.037 2.10 0.00 0.00 0.86
2821 3487 9.678941 CGAGACTGAAGCTTGTAAACATATATA 57.321 33.333 2.10 0.00 0.00 0.86
2827 3493 9.244799 TGAAGCTTGTAAACATATATACTGTCG 57.755 33.333 2.10 0.00 0.00 4.35
2828 3494 9.245962 GAAGCTTGTAAACATATATACTGTCGT 57.754 33.333 2.10 0.00 0.00 4.34
2873 3539 2.417558 AAAGCTGGAGAGTGGGTGGC 62.418 60.000 0.00 0.00 0.00 5.01
2903 3576 9.349145 GTGGCACGACATAAAAACTATATTTTT 57.651 29.630 0.00 3.17 34.51 1.94
2952 3631 3.894427 TGCTCCTTTCATTTTTGGCACTA 59.106 39.130 0.00 0.00 0.00 2.74
2962 3641 0.324943 TTTGGCACTACCCTCTCTGC 59.675 55.000 0.00 0.00 37.83 4.26
2975 3654 2.538437 CTCTCTGCTCATCCTTGTTCG 58.462 52.381 0.00 0.00 0.00 3.95
3019 3699 9.677567 TTTATTTACTACGTACTGTTCTTCGTT 57.322 29.630 0.00 0.00 37.66 3.85
3027 3707 3.134574 ACTGTTCTTCGTTGGGCATAA 57.865 42.857 0.00 0.00 0.00 1.90
3028 3708 3.482436 ACTGTTCTTCGTTGGGCATAAA 58.518 40.909 0.00 0.00 0.00 1.40
3037 3717 4.787551 TCGTTGGGCATAAACCAGATTAT 58.212 39.130 0.00 0.00 39.57 1.28
3046 3726 7.014230 GGGCATAAACCAGATTATTTCTAGCAA 59.986 37.037 0.00 0.00 31.77 3.91
3082 3762 1.911293 GCTCAGCAAATTCGGCGACA 61.911 55.000 10.16 0.97 36.08 4.35
3084 3764 0.516877 TCAGCAAATTCGGCGACAAG 59.483 50.000 10.16 0.70 36.08 3.16
3092 3772 3.423154 CGGCGACAAGGGTGAAGC 61.423 66.667 0.00 0.00 0.00 3.86
3093 3773 3.423154 GGCGACAAGGGTGAAGCG 61.423 66.667 0.00 0.00 33.61 4.68
3094 3774 4.090057 GCGACAAGGGTGAAGCGC 62.090 66.667 0.00 0.00 36.67 5.92
3095 3775 2.357517 CGACAAGGGTGAAGCGCT 60.358 61.111 2.64 2.64 42.61 5.92
3096 3776 2.383527 CGACAAGGGTGAAGCGCTC 61.384 63.158 12.06 4.99 39.65 5.03
3097 3777 1.004440 GACAAGGGTGAAGCGCTCT 60.004 57.895 12.06 0.00 39.65 4.09
3098 3778 0.603975 GACAAGGGTGAAGCGCTCTT 60.604 55.000 12.06 6.40 39.65 2.85
3099 3779 0.685097 ACAAGGGTGAAGCGCTCTTA 59.315 50.000 12.06 0.00 39.65 2.10
3101 3781 2.500098 ACAAGGGTGAAGCGCTCTTATA 59.500 45.455 12.06 0.00 39.65 0.98
3102 3782 3.134804 ACAAGGGTGAAGCGCTCTTATAT 59.865 43.478 12.06 0.00 39.65 0.86
3103 3783 4.130118 CAAGGGTGAAGCGCTCTTATATT 58.870 43.478 12.06 0.00 39.65 1.28
3106 3786 4.101741 AGGGTGAAGCGCTCTTATATTTCT 59.898 41.667 12.06 0.00 35.22 2.52
3107 3787 4.816925 GGGTGAAGCGCTCTTATATTTCTT 59.183 41.667 12.06 0.00 31.48 2.52
3108 3788 5.297029 GGGTGAAGCGCTCTTATATTTCTTT 59.703 40.000 12.06 0.00 31.48 2.52
3110 3790 7.345943 GGTGAAGCGCTCTTATATTTCTTTAC 58.654 38.462 12.06 0.00 31.48 2.01
3111 3791 7.011109 GGTGAAGCGCTCTTATATTTCTTTACA 59.989 37.037 12.06 0.00 31.48 2.41
3112 3792 8.058915 GTGAAGCGCTCTTATATTTCTTTACAG 58.941 37.037 12.06 0.00 31.48 2.74
3113 3793 7.979537 TGAAGCGCTCTTATATTTCTTTACAGA 59.020 33.333 12.06 0.00 31.48 3.41
3114 3794 7.938563 AGCGCTCTTATATTTCTTTACAGAG 57.061 36.000 2.64 0.00 0.00 3.35
3115 3795 6.926272 AGCGCTCTTATATTTCTTTACAGAGG 59.074 38.462 2.64 0.00 0.00 3.69
3116 3796 6.146347 GCGCTCTTATATTTCTTTACAGAGGG 59.854 42.308 0.00 0.00 40.81 4.30
3117 3797 7.434492 CGCTCTTATATTTCTTTACAGAGGGA 58.566 38.462 4.76 0.00 40.49 4.20
3118 3798 7.596995 CGCTCTTATATTTCTTTACAGAGGGAG 59.403 40.741 4.76 0.00 40.49 4.30
3119 3799 8.425703 GCTCTTATATTTCTTTACAGAGGGAGT 58.574 37.037 0.00 0.00 0.00 3.85
3125 3805 6.847421 TTTCTTTACAGAGGGAGTACTACC 57.153 41.667 17.30 17.30 0.00 3.18
3130 3810 9.007494 TCTTTACAGAGGGAGTACTACCTAATA 57.993 37.037 27.44 15.80 46.12 0.98
3131 3811 9.287373 CTTTACAGAGGGAGTACTACCTAATAG 57.713 40.741 27.44 17.84 46.12 1.73
3132 3812 5.633117 ACAGAGGGAGTACTACCTAATAGC 58.367 45.833 27.44 13.93 46.12 2.97
3133 3813 5.373257 ACAGAGGGAGTACTACCTAATAGCT 59.627 44.000 27.44 16.07 46.12 3.32
3135 3815 6.207810 CAGAGGGAGTACTACCTAATAGCTTG 59.792 46.154 27.44 12.13 46.12 4.01
3136 3816 5.395611 AGGGAGTACTACCTAATAGCTTGG 58.604 45.833 26.28 0.00 43.72 3.61
3137 3817 5.135705 AGGGAGTACTACCTAATAGCTTGGA 59.864 44.000 26.28 0.00 43.72 3.53
3138 3818 5.837438 GGGAGTACTACCTAATAGCTTGGAA 59.163 44.000 17.74 0.00 33.73 3.53
3140 3820 7.147602 GGGAGTACTACCTAATAGCTTGGAAAA 60.148 40.741 17.74 0.00 33.73 2.29
3142 3822 9.833917 GAGTACTACCTAATAGCTTGGAAAAAT 57.166 33.333 0.00 0.00 33.73 1.82
3149 3829 8.633561 ACCTAATAGCTTGGAAAAATATCTTGC 58.366 33.333 0.00 0.00 0.00 4.01
3150 3830 8.632679 CCTAATAGCTTGGAAAAATATCTTGCA 58.367 33.333 0.00 0.00 0.00 4.08
3154 3834 9.971922 ATAGCTTGGAAAAATATCTTGCATTAC 57.028 29.630 0.00 0.00 0.00 1.89
3155 3835 6.974622 AGCTTGGAAAAATATCTTGCATTACG 59.025 34.615 0.00 0.00 0.00 3.18
3156 3836 6.198966 GCTTGGAAAAATATCTTGCATTACGG 59.801 38.462 0.00 0.00 0.00 4.02
3157 3837 7.397892 TTGGAAAAATATCTTGCATTACGGA 57.602 32.000 0.00 0.00 0.00 4.69
3158 3838 7.397892 TGGAAAAATATCTTGCATTACGGAA 57.602 32.000 0.00 0.00 0.00 4.30
3159 3839 7.254852 TGGAAAAATATCTTGCATTACGGAAC 58.745 34.615 0.00 0.00 0.00 3.62
3212 3892 8.814931 TCCAAATTCTTGTGGAAATGAATACAT 58.185 29.630 0.00 0.00 41.02 2.29
3239 3919 7.335924 ACTGTGTTTTATCACGGCTGTAAATAT 59.664 33.333 0.00 0.00 45.41 1.28
3240 3920 8.719560 TGTGTTTTATCACGGCTGTAAATATA 57.280 30.769 0.00 0.00 40.74 0.86
3287 3967 3.623510 GGGTTCAGAGTGCTACTAAATGC 59.376 47.826 0.00 0.00 0.00 3.56
3308 3988 8.986477 AATGCATTCCTTTCATGTTTACTTAC 57.014 30.769 5.99 0.00 0.00 2.34
3309 3989 6.607689 TGCATTCCTTTCATGTTTACTTACG 58.392 36.000 0.00 0.00 0.00 3.18
3327 4015 9.762933 TTACTTACGGTTAAGAGTTTGTGTTAT 57.237 29.630 0.21 0.00 37.49 1.89
3378 4100 2.959707 CTCACGGCCTTATCTTAGGTCT 59.040 50.000 0.00 0.00 37.78 3.85
3379 4101 4.142790 CTCACGGCCTTATCTTAGGTCTA 58.857 47.826 0.00 0.00 37.78 2.59
3380 4102 4.539726 TCACGGCCTTATCTTAGGTCTAA 58.460 43.478 0.00 0.00 37.78 2.10
3381 4103 5.145564 TCACGGCCTTATCTTAGGTCTAAT 58.854 41.667 0.00 0.00 37.78 1.73
3382 4104 5.601313 TCACGGCCTTATCTTAGGTCTAATT 59.399 40.000 0.00 0.00 37.78 1.40
3383 4105 5.927115 CACGGCCTTATCTTAGGTCTAATTC 59.073 44.000 0.00 0.00 37.78 2.17
3384 4106 5.839606 ACGGCCTTATCTTAGGTCTAATTCT 59.160 40.000 0.00 0.00 37.78 2.40
3385 4107 6.159988 CGGCCTTATCTTAGGTCTAATTCTG 58.840 44.000 0.00 0.00 37.78 3.02
3386 4108 6.239345 CGGCCTTATCTTAGGTCTAATTCTGT 60.239 42.308 0.00 0.00 37.78 3.41
3387 4109 6.931840 GGCCTTATCTTAGGTCTAATTCTGTG 59.068 42.308 0.00 0.00 36.95 3.66
3388 4110 7.419172 GGCCTTATCTTAGGTCTAATTCTGTGT 60.419 40.741 0.00 0.00 36.95 3.72
3389 4111 8.639761 GCCTTATCTTAGGTCTAATTCTGTGTA 58.360 37.037 0.00 0.00 37.63 2.90
3390 4112 9.968870 CCTTATCTTAGGTCTAATTCTGTGTAC 57.031 37.037 0.00 0.00 0.00 2.90
3424 4146 7.197703 TGCGAATATAAGTCGATGTACTTTCA 58.802 34.615 12.07 0.00 41.02 2.69
3430 4152 7.772332 ATAAGTCGATGTACTTTCAATGACC 57.228 36.000 0.00 0.00 40.20 4.02
3438 4160 9.438291 CGATGTACTTTCAATGACCATAATTTC 57.562 33.333 0.00 0.00 0.00 2.17
3448 4176 7.720957 TCAATGACCATAATTTCATAGGACCTG 59.279 37.037 3.53 0.00 31.99 4.00
3449 4177 5.940617 TGACCATAATTTCATAGGACCTGG 58.059 41.667 3.53 0.00 0.00 4.45
3480 4208 6.594744 TCATCATTGACAGTGTATAGCCATT 58.405 36.000 0.00 0.00 0.00 3.16
3481 4209 6.707608 TCATCATTGACAGTGTATAGCCATTC 59.292 38.462 0.00 0.00 0.00 2.67
3482 4210 6.239217 TCATTGACAGTGTATAGCCATTCT 57.761 37.500 0.00 0.00 0.00 2.40
3483 4211 7.360113 TCATTGACAGTGTATAGCCATTCTA 57.640 36.000 0.00 0.00 0.00 2.10
3484 4212 7.210174 TCATTGACAGTGTATAGCCATTCTAC 58.790 38.462 0.00 0.00 0.00 2.59
3485 4213 5.531122 TGACAGTGTATAGCCATTCTACC 57.469 43.478 0.00 0.00 0.00 3.18
3486 4214 5.208890 TGACAGTGTATAGCCATTCTACCT 58.791 41.667 0.00 0.00 0.00 3.08
3487 4215 5.661312 TGACAGTGTATAGCCATTCTACCTT 59.339 40.000 0.00 0.00 0.00 3.50
3488 4216 6.163135 ACAGTGTATAGCCATTCTACCTTC 57.837 41.667 0.00 0.00 0.00 3.46
3489 4217 5.070580 ACAGTGTATAGCCATTCTACCTTCC 59.929 44.000 0.00 0.00 0.00 3.46
3490 4218 5.070446 CAGTGTATAGCCATTCTACCTTCCA 59.930 44.000 0.00 0.00 0.00 3.53
3491 4219 5.846714 AGTGTATAGCCATTCTACCTTCCAT 59.153 40.000 0.00 0.00 0.00 3.41
3492 4220 7.016914 AGTGTATAGCCATTCTACCTTCCATA 58.983 38.462 0.00 0.00 0.00 2.74
3493 4221 7.179338 AGTGTATAGCCATTCTACCTTCCATAG 59.821 40.741 0.00 0.00 0.00 2.23
3494 4222 7.178628 GTGTATAGCCATTCTACCTTCCATAGA 59.821 40.741 0.00 0.00 0.00 1.98
3518 4246 7.621683 AGAGAAATATAAACTCCTCACTCCTGT 59.378 37.037 0.00 0.00 0.00 4.00
3530 4258 3.162202 CACTCCTGTGATGAGTAGCTG 57.838 52.381 0.00 0.00 46.55 4.24
3568 4296 2.823196 TGCAACAACTGAAACAGACG 57.177 45.000 5.76 0.00 35.18 4.18
3569 4297 2.080693 TGCAACAACTGAAACAGACGT 58.919 42.857 5.76 0.00 35.18 4.34
3572 4300 3.670203 CAACAACTGAAACAGACGTCAC 58.330 45.455 19.50 4.23 35.18 3.67
3579 4307 4.816385 ACTGAAACAGACGTCACAAATGAT 59.184 37.500 19.50 0.00 34.62 2.45
3587 4315 6.366332 ACAGACGTCACAAATGATAGACTTTC 59.634 38.462 19.50 0.00 37.14 2.62
3590 4318 6.455647 ACGTCACAAATGATAGACTTTCTCA 58.544 36.000 0.00 0.00 37.14 3.27
3618 4354 3.038788 TGCTCTCGCACATTCAGTTAA 57.961 42.857 0.00 0.00 42.25 2.01
3625 4361 4.627058 TCGCACATTCAGTTAACTTCAGA 58.373 39.130 5.07 0.00 0.00 3.27
3627 4363 5.050363 TCGCACATTCAGTTAACTTCAGAAC 60.050 40.000 5.07 0.00 0.00 3.01
3628 4364 5.277297 CGCACATTCAGTTAACTTCAGAACA 60.277 40.000 5.07 0.00 0.00 3.18
3639 4375 3.759581 ACTTCAGAACACATGCTGGAAT 58.240 40.909 0.00 0.00 33.05 3.01
3640 4376 3.504906 ACTTCAGAACACATGCTGGAATG 59.495 43.478 0.00 0.00 33.05 2.67
3641 4377 1.814394 TCAGAACACATGCTGGAATGC 59.186 47.619 0.00 0.00 33.05 3.56
3643 4379 2.029739 CAGAACACATGCTGGAATGCAA 60.030 45.455 0.00 0.00 46.61 4.08
3644 4380 2.230508 AGAACACATGCTGGAATGCAAG 59.769 45.455 0.00 0.00 46.61 4.01
3645 4381 0.892755 ACACATGCTGGAATGCAAGG 59.107 50.000 0.00 0.00 46.61 3.61
3646 4382 1.179152 CACATGCTGGAATGCAAGGA 58.821 50.000 0.00 0.00 46.61 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 1.172180 TTTTGCAACTCAGGAGCCCG 61.172 55.000 0.00 0.00 0.00 6.13
64 65 3.325072 TTGCGTCGCAATTCGTGT 58.675 50.000 27.85 0.00 43.99 4.49
72 73 0.808755 TCTGATCTACTTGCGTCGCA 59.191 50.000 17.58 17.58 36.47 5.10
73 74 1.783711 CATCTGATCTACTTGCGTCGC 59.216 52.381 11.10 11.10 0.00 5.19
77 78 3.388308 CTTCCCATCTGATCTACTTGCG 58.612 50.000 0.00 0.00 0.00 4.85
89 90 0.976641 TCGTTCACTGCTTCCCATCT 59.023 50.000 0.00 0.00 0.00 2.90
117 118 8.704668 TGCTCAAACTCAGATAGGTGAATTATA 58.295 33.333 0.00 0.00 0.00 0.98
119 120 6.946340 TGCTCAAACTCAGATAGGTGAATTA 58.054 36.000 0.00 0.00 0.00 1.40
139 140 7.752695 TCTCTTTTTCTATTTCGGATTTGCTC 58.247 34.615 0.00 0.00 0.00 4.26
155 156 9.698309 CCTTCCCTTTTCTATTTTCTCTTTTTC 57.302 33.333 0.00 0.00 0.00 2.29
157 158 9.434275 TTCCTTCCCTTTTCTATTTTCTCTTTT 57.566 29.630 0.00 0.00 0.00 2.27
161 162 7.575155 CGGTTTCCTTCCCTTTTCTATTTTCTC 60.575 40.741 0.00 0.00 0.00 2.87
163 164 6.387465 CGGTTTCCTTCCCTTTTCTATTTTC 58.613 40.000 0.00 0.00 0.00 2.29
240 256 4.230657 GTCGGATAGAGTGCATGTATGTC 58.769 47.826 0.00 0.00 0.00 3.06
263 279 1.811266 CGATCTCTTGCCCGTGTGG 60.811 63.158 0.00 0.00 37.09 4.17
270 286 4.047822 CAAGTACAGATCGATCTCTTGCC 58.952 47.826 28.27 15.96 32.88 4.52
274 290 3.634448 CCCACAAGTACAGATCGATCTCT 59.366 47.826 25.00 16.41 34.22 3.10
275 291 3.797184 GCCCACAAGTACAGATCGATCTC 60.797 52.174 25.00 14.12 34.22 2.75
290 309 6.010850 TGTTTGTTGTATTATAGGCCCACAA 58.989 36.000 0.00 0.00 0.00 3.33
295 314 8.557029 GTGTATCTGTTTGTTGTATTATAGGCC 58.443 37.037 0.00 0.00 0.00 5.19
296 315 9.104965 TGTGTATCTGTTTGTTGTATTATAGGC 57.895 33.333 0.00 0.00 0.00 3.93
302 321 8.898761 TCTGTTTGTGTATCTGTTTGTTGTATT 58.101 29.630 0.00 0.00 0.00 1.89
303 322 8.445275 TCTGTTTGTGTATCTGTTTGTTGTAT 57.555 30.769 0.00 0.00 0.00 2.29
313 343 6.974622 GGCCAATTTATCTGTTTGTGTATCTG 59.025 38.462 0.00 0.00 0.00 2.90
316 346 5.678616 GCGGCCAATTTATCTGTTTGTGTAT 60.679 40.000 2.24 0.00 0.00 2.29
317 347 4.380023 GCGGCCAATTTATCTGTTTGTGTA 60.380 41.667 2.24 0.00 0.00 2.90
340 370 3.238241 CGGTAGAGCGACGTTGCG 61.238 66.667 21.74 7.24 40.67 4.85
345 375 4.554363 CAGGCCGGTAGAGCGACG 62.554 72.222 1.90 0.00 0.00 5.12
348 378 2.722487 CTACAGGCCGGTAGAGCG 59.278 66.667 32.26 10.98 42.68 5.03
363 393 1.038681 TGCAACGCCGATCCTACCTA 61.039 55.000 0.00 0.00 0.00 3.08
364 394 2.298158 CTGCAACGCCGATCCTACCT 62.298 60.000 0.00 0.00 0.00 3.08
375 405 2.047274 TCTACCAGCCTGCAACGC 60.047 61.111 0.00 0.00 0.00 4.84
386 416 4.455533 CAGCTAAAACATGTTGCTCTACCA 59.544 41.667 16.59 0.00 0.00 3.25
407 437 7.540055 GGATTAATCTGAAGCTGAAACAAACAG 59.460 37.037 14.95 0.00 38.27 3.16
408 438 7.231317 AGGATTAATCTGAAGCTGAAACAAACA 59.769 33.333 14.95 0.00 0.00 2.83
409 439 7.597386 AGGATTAATCTGAAGCTGAAACAAAC 58.403 34.615 14.95 0.00 0.00 2.93
410 440 7.765695 AGGATTAATCTGAAGCTGAAACAAA 57.234 32.000 14.95 0.00 0.00 2.83
411 441 9.113838 GATAGGATTAATCTGAAGCTGAAACAA 57.886 33.333 14.95 0.00 0.00 2.83
412 442 8.267183 TGATAGGATTAATCTGAAGCTGAAACA 58.733 33.333 14.95 1.86 0.00 2.83
413 443 8.668510 TGATAGGATTAATCTGAAGCTGAAAC 57.331 34.615 14.95 0.00 0.00 2.78
414 444 9.685276 TTTGATAGGATTAATCTGAAGCTGAAA 57.315 29.630 14.95 2.92 0.00 2.69
415 445 9.685276 TTTTGATAGGATTAATCTGAAGCTGAA 57.315 29.630 14.95 0.56 0.00 3.02
416 446 9.857656 ATTTTGATAGGATTAATCTGAAGCTGA 57.142 29.630 14.95 0.00 0.00 4.26
437 467 9.859427 TGTTTCAGATTTATAAGGCAGATTTTG 57.141 29.630 0.00 0.00 0.00 2.44
440 470 9.860898 GTTTGTTTCAGATTTATAAGGCAGATT 57.139 29.630 0.00 0.00 0.00 2.40
441 471 9.023962 TGTTTGTTTCAGATTTATAAGGCAGAT 57.976 29.630 0.00 0.00 0.00 2.90
442 472 8.402798 TGTTTGTTTCAGATTTATAAGGCAGA 57.597 30.769 0.00 0.00 0.00 4.26
443 473 7.756722 CCTGTTTGTTTCAGATTTATAAGGCAG 59.243 37.037 0.00 0.00 35.20 4.85
444 474 7.309744 CCCTGTTTGTTTCAGATTTATAAGGCA 60.310 37.037 0.00 0.00 35.20 4.75
445 475 7.035612 CCCTGTTTGTTTCAGATTTATAAGGC 58.964 38.462 0.00 0.00 35.20 4.35
446 476 7.035612 GCCCTGTTTGTTTCAGATTTATAAGG 58.964 38.462 0.00 0.00 35.20 2.69
447 477 7.601856 TGCCCTGTTTGTTTCAGATTTATAAG 58.398 34.615 0.00 0.00 35.20 1.73
448 478 7.531857 TGCCCTGTTTGTTTCAGATTTATAA 57.468 32.000 0.00 0.00 35.20 0.98
449 479 7.716799 ATGCCCTGTTTGTTTCAGATTTATA 57.283 32.000 0.00 0.00 35.20 0.98
450 480 6.610075 ATGCCCTGTTTGTTTCAGATTTAT 57.390 33.333 0.00 0.00 35.20 1.40
451 481 7.531857 TTATGCCCTGTTTGTTTCAGATTTA 57.468 32.000 0.00 0.00 35.20 1.40
452 482 4.961438 ATGCCCTGTTTGTTTCAGATTT 57.039 36.364 0.00 0.00 35.20 2.17
453 483 6.610075 ATTATGCCCTGTTTGTTTCAGATT 57.390 33.333 0.00 0.00 35.20 2.40
454 484 6.400568 CAATTATGCCCTGTTTGTTTCAGAT 58.599 36.000 0.00 0.00 35.20 2.90
455 485 5.279406 CCAATTATGCCCTGTTTGTTTCAGA 60.279 40.000 0.00 0.00 35.20 3.27
456 486 4.931002 CCAATTATGCCCTGTTTGTTTCAG 59.069 41.667 0.00 0.00 0.00 3.02
457 487 4.590647 TCCAATTATGCCCTGTTTGTTTCA 59.409 37.500 0.00 0.00 0.00 2.69
458 488 4.929211 GTCCAATTATGCCCTGTTTGTTTC 59.071 41.667 0.00 0.00 0.00 2.78
459 489 4.560513 CGTCCAATTATGCCCTGTTTGTTT 60.561 41.667 0.00 0.00 0.00 2.83
460 490 3.056891 CGTCCAATTATGCCCTGTTTGTT 60.057 43.478 0.00 0.00 0.00 2.83
461 491 2.491693 CGTCCAATTATGCCCTGTTTGT 59.508 45.455 0.00 0.00 0.00 2.83
462 492 2.159254 CCGTCCAATTATGCCCTGTTTG 60.159 50.000 0.00 0.00 0.00 2.93
463 493 2.099405 CCGTCCAATTATGCCCTGTTT 58.901 47.619 0.00 0.00 0.00 2.83
464 494 1.005450 ACCGTCCAATTATGCCCTGTT 59.995 47.619 0.00 0.00 0.00 3.16
465 495 0.623723 ACCGTCCAATTATGCCCTGT 59.376 50.000 0.00 0.00 0.00 4.00
466 496 2.631160 TACCGTCCAATTATGCCCTG 57.369 50.000 0.00 0.00 0.00 4.45
467 497 3.486383 CATTACCGTCCAATTATGCCCT 58.514 45.455 0.00 0.00 0.00 5.19
468 498 2.556622 CCATTACCGTCCAATTATGCCC 59.443 50.000 0.00 0.00 0.00 5.36
469 499 2.556622 CCCATTACCGTCCAATTATGCC 59.443 50.000 0.00 0.00 0.00 4.40
470 500 2.030274 GCCCATTACCGTCCAATTATGC 60.030 50.000 0.00 0.00 0.00 3.14
471 501 2.225491 CGCCCATTACCGTCCAATTATG 59.775 50.000 0.00 0.00 0.00 1.90
472 502 2.158726 ACGCCCATTACCGTCCAATTAT 60.159 45.455 0.00 0.00 31.00 1.28
473 503 1.209990 ACGCCCATTACCGTCCAATTA 59.790 47.619 0.00 0.00 31.00 1.40
474 504 0.034863 ACGCCCATTACCGTCCAATT 60.035 50.000 0.00 0.00 31.00 2.32
479 509 0.655733 CATTCACGCCCATTACCGTC 59.344 55.000 0.00 0.00 35.17 4.79
488 518 2.362397 TCTCATACTCTCATTCACGCCC 59.638 50.000 0.00 0.00 0.00 6.13
491 521 4.537936 TCGTCTCATACTCTCATTCACG 57.462 45.455 0.00 0.00 0.00 4.35
505 535 3.380637 GGGTGAGCTTTAGTATCGTCTCA 59.619 47.826 0.00 0.00 0.00 3.27
510 540 4.124851 AGTTGGGTGAGCTTTAGTATCG 57.875 45.455 0.00 0.00 0.00 2.92
529 559 5.165961 TCAATGGCTAAAACTCAGCTAGT 57.834 39.130 0.00 0.00 41.49 2.57
589 619 8.041323 AGGTATAGCATGCTAATAGCGTATTTT 58.959 33.333 30.06 12.25 46.26 1.82
594 624 5.407407 AAGGTATAGCATGCTAATAGCGT 57.593 39.130 30.06 23.02 46.26 5.07
595 625 9.698309 ATAATAAGGTATAGCATGCTAATAGCG 57.302 33.333 30.06 0.00 46.26 4.26
604 634 5.276395 GCACGCGATAATAAGGTATAGCATG 60.276 44.000 15.93 0.00 33.21 4.06
674 704 8.464404 TCGGTAATAGCACGCTATAGATTTTAT 58.536 33.333 11.80 0.00 38.20 1.40
680 1052 3.124128 CGTCGGTAATAGCACGCTATAGA 59.876 47.826 11.80 7.05 38.20 1.98
687 1059 2.913265 GCGCGTCGGTAATAGCACG 61.913 63.158 8.43 9.04 35.32 5.34
691 1063 0.641783 AAAACGCGCGTCGGTAATAG 59.358 50.000 37.77 2.38 43.86 1.73
709 1081 2.023307 TGGTAAAACCAGTGGGGGAAAA 60.023 45.455 15.21 0.00 44.79 2.29
728 1100 6.153340 ACACTTTTTCCTTCATATGGATGTGG 59.847 38.462 2.13 0.00 34.41 4.17
744 1116 7.557036 AAACACAAGAACGTAACACTTTTTC 57.443 32.000 0.00 0.00 0.00 2.29
766 1138 5.070770 ACACAAGTGCTGATTTGACAAAA 57.929 34.783 4.41 0.00 0.00 2.44
814 1186 4.457466 ACTACTTTGATTTGTTCCGTGGT 58.543 39.130 0.00 0.00 0.00 4.16
816 1188 5.137403 CGAACTACTTTGATTTGTTCCGTG 58.863 41.667 0.00 0.00 35.09 4.94
817 1189 4.812626 ACGAACTACTTTGATTTGTTCCGT 59.187 37.500 0.00 0.00 35.09 4.69
818 1190 5.338614 ACGAACTACTTTGATTTGTTCCG 57.661 39.130 0.00 0.00 35.09 4.30
819 1191 7.698970 TGAAAACGAACTACTTTGATTTGTTCC 59.301 33.333 0.00 0.00 35.09 3.62
820 1192 8.609478 TGAAAACGAACTACTTTGATTTGTTC 57.391 30.769 0.00 0.00 30.32 3.18
829 1201 8.715088 GTGGTGTATATGAAAACGAACTACTTT 58.285 33.333 0.00 0.00 0.00 2.66
830 1202 7.062605 CGTGGTGTATATGAAAACGAACTACTT 59.937 37.037 0.00 0.00 0.00 2.24
860 1232 7.176340 GTGGTGACTACTTATACTAGTATGGGG 59.824 44.444 23.09 14.98 30.65 4.96
907 1279 1.677637 GGAAGGTAGGTCAGCTCGGG 61.678 65.000 0.00 0.00 32.46 5.14
908 1280 0.684805 AGGAAGGTAGGTCAGCTCGG 60.685 60.000 0.00 0.00 32.46 4.63
909 1281 1.677052 GTAGGAAGGTAGGTCAGCTCG 59.323 57.143 0.00 0.00 32.46 5.03
910 1282 2.736347 TGTAGGAAGGTAGGTCAGCTC 58.264 52.381 0.00 0.00 32.46 4.09
911 1283 2.921834 TGTAGGAAGGTAGGTCAGCT 57.078 50.000 0.00 0.00 36.21 4.24
963 1335 1.615883 GTGCTCCTGACTGACTTGAGA 59.384 52.381 0.00 0.00 0.00 3.27
964 1336 1.668337 CGTGCTCCTGACTGACTTGAG 60.668 57.143 0.00 0.00 0.00 3.02
965 1337 0.315251 CGTGCTCCTGACTGACTTGA 59.685 55.000 0.00 0.00 0.00 3.02
967 1339 1.668294 CCGTGCTCCTGACTGACTT 59.332 57.895 0.00 0.00 0.00 3.01
968 1340 2.936912 GCCGTGCTCCTGACTGACT 61.937 63.158 0.00 0.00 0.00 3.41
969 1341 2.433318 GCCGTGCTCCTGACTGAC 60.433 66.667 0.00 0.00 0.00 3.51
970 1342 4.056125 CGCCGTGCTCCTGACTGA 62.056 66.667 0.00 0.00 0.00 3.41
971 1343 4.056125 TCGCCGTGCTCCTGACTG 62.056 66.667 0.00 0.00 0.00 3.51
1057 1436 0.035056 AGGTACACAGCAATGGCCTC 60.035 55.000 3.32 0.00 42.56 4.70
1069 1448 2.106683 GCCATGGCACGAGGTACAC 61.107 63.158 32.08 0.00 41.49 2.90
1111 1490 0.756294 TCATGGATGATTACGGCGGT 59.244 50.000 13.24 1.39 0.00 5.68
1118 1497 2.705658 ACCTCCGCTTCATGGATGATTA 59.294 45.455 0.00 0.00 36.56 1.75
1227 1609 3.702048 CCCGACCCGGCTTTCTGA 61.702 66.667 0.00 0.00 46.86 3.27
1350 1732 1.405821 CTCTGGCCCTTGTACTCGTAG 59.594 57.143 0.00 0.00 0.00 3.51
1355 1737 2.660064 CCGCTCTGGCCCTTGTACT 61.660 63.158 0.00 0.00 34.44 2.73
1380 1762 1.226802 CTCGTCCATGAGCCACTCG 60.227 63.158 0.00 0.00 32.35 4.18
1401 1783 3.754530 TCGAATCCGCGGCAGTGA 61.755 61.111 23.51 13.19 35.37 3.41
1420 1802 1.048601 TCATGGAGGAGGGCGTATTC 58.951 55.000 0.00 0.00 0.00 1.75
1501 1890 0.790866 GCAGATTGTTGAAGCGCGAC 60.791 55.000 12.10 0.04 0.00 5.19
1741 2172 1.299165 CGACGTATCCTGGCTTCGG 60.299 63.158 1.83 0.00 0.00 4.30
1905 2348 2.661866 GTGACGCGACCTTGCTGT 60.662 61.111 15.93 0.00 0.00 4.40
1906 2349 3.767230 CGTGACGCGACCTTGCTG 61.767 66.667 15.93 0.00 44.77 4.41
1912 2355 4.353437 AGGAACCGTGACGCGACC 62.353 66.667 15.93 10.13 44.77 4.79
2043 2504 0.391661 ATTGTCTAGGTGGTGCTGCG 60.392 55.000 0.00 0.00 0.00 5.18
2055 2516 3.832490 CCCACGATAGGATGGATTGTCTA 59.168 47.826 0.00 0.00 38.34 2.59
2060 2542 1.625818 GCTCCCACGATAGGATGGATT 59.374 52.381 0.00 0.00 38.34 3.01
2070 2552 3.976701 CTTTGCCGGCTCCCACGAT 62.977 63.158 29.70 0.00 0.00 3.73
2192 2698 2.227089 GATCGTCCTCGTGTGGCCTT 62.227 60.000 3.32 0.00 38.33 4.35
2201 2707 1.732259 CCTTTTGTTGGATCGTCCTCG 59.268 52.381 5.77 0.00 37.46 4.63
2311 2817 2.287308 CGTCATCCAAAAACCTCGCAAA 60.287 45.455 0.00 0.00 0.00 3.68
2312 2818 1.265635 CGTCATCCAAAAACCTCGCAA 59.734 47.619 0.00 0.00 0.00 4.85
2313 2819 0.871722 CGTCATCCAAAAACCTCGCA 59.128 50.000 0.00 0.00 0.00 5.10
2314 2820 0.872388 ACGTCATCCAAAAACCTCGC 59.128 50.000 0.00 0.00 0.00 5.03
2315 2821 1.399727 GCACGTCATCCAAAAACCTCG 60.400 52.381 0.00 0.00 0.00 4.63
2316 2822 1.880027 AGCACGTCATCCAAAAACCTC 59.120 47.619 0.00 0.00 0.00 3.85
2317 2823 1.981256 AGCACGTCATCCAAAAACCT 58.019 45.000 0.00 0.00 0.00 3.50
2318 2824 2.034053 TCAAGCACGTCATCCAAAAACC 59.966 45.455 0.00 0.00 0.00 3.27
2319 2825 3.347958 TCAAGCACGTCATCCAAAAAC 57.652 42.857 0.00 0.00 0.00 2.43
2320 2826 3.380004 ACTTCAAGCACGTCATCCAAAAA 59.620 39.130 0.00 0.00 0.00 1.94
2321 2827 2.948979 ACTTCAAGCACGTCATCCAAAA 59.051 40.909 0.00 0.00 0.00 2.44
2322 2828 2.571212 ACTTCAAGCACGTCATCCAAA 58.429 42.857 0.00 0.00 0.00 3.28
2323 2829 2.254546 ACTTCAAGCACGTCATCCAA 57.745 45.000 0.00 0.00 0.00 3.53
2324 2830 2.930887 GCTACTTCAAGCACGTCATCCA 60.931 50.000 0.00 0.00 42.30 3.41
2325 2831 1.661112 GCTACTTCAAGCACGTCATCC 59.339 52.381 0.00 0.00 42.30 3.51
2334 2840 1.276421 TCCTCTGGTGCTACTTCAAGC 59.724 52.381 0.00 0.00 43.08 4.01
2335 2841 2.828520 TCTCCTCTGGTGCTACTTCAAG 59.171 50.000 0.00 0.00 0.00 3.02
2336 2842 2.563179 GTCTCCTCTGGTGCTACTTCAA 59.437 50.000 0.00 0.00 0.00 2.69
2337 2843 2.171840 GTCTCCTCTGGTGCTACTTCA 58.828 52.381 0.00 0.00 0.00 3.02
2338 2844 1.133407 CGTCTCCTCTGGTGCTACTTC 59.867 57.143 0.00 0.00 0.00 3.01
2339 2845 1.178276 CGTCTCCTCTGGTGCTACTT 58.822 55.000 0.00 0.00 0.00 2.24
2340 2846 0.681564 CCGTCTCCTCTGGTGCTACT 60.682 60.000 0.00 0.00 0.00 2.57
2341 2847 0.680280 TCCGTCTCCTCTGGTGCTAC 60.680 60.000 0.00 0.00 0.00 3.58
2342 2848 0.039180 TTCCGTCTCCTCTGGTGCTA 59.961 55.000 0.00 0.00 0.00 3.49
2343 2849 1.228894 TTCCGTCTCCTCTGGTGCT 60.229 57.895 0.00 0.00 0.00 4.40
2344 2850 1.216710 CTTCCGTCTCCTCTGGTGC 59.783 63.158 0.00 0.00 0.00 5.01
2345 2851 0.528470 GTCTTCCGTCTCCTCTGGTG 59.472 60.000 0.00 0.00 0.00 4.17
2346 2852 0.961358 CGTCTTCCGTCTCCTCTGGT 60.961 60.000 0.00 0.00 0.00 4.00
2347 2853 1.803943 CGTCTTCCGTCTCCTCTGG 59.196 63.158 0.00 0.00 0.00 3.86
2357 2863 0.797249 CTTGCCGTCTACGTCTTCCG 60.797 60.000 0.00 0.00 44.03 4.30
2358 2864 0.524862 TCTTGCCGTCTACGTCTTCC 59.475 55.000 0.00 0.00 37.74 3.46
2359 2865 2.159421 TGATCTTGCCGTCTACGTCTTC 60.159 50.000 0.00 0.00 37.74 2.87
2360 2866 1.816835 TGATCTTGCCGTCTACGTCTT 59.183 47.619 0.00 0.00 37.74 3.01
2361 2867 1.460504 TGATCTTGCCGTCTACGTCT 58.539 50.000 0.00 0.00 37.74 4.18
2362 2868 2.120232 CATGATCTTGCCGTCTACGTC 58.880 52.381 0.00 0.00 37.74 4.34
2363 2869 1.802880 GCATGATCTTGCCGTCTACGT 60.803 52.381 20.10 0.00 36.60 3.57
2364 2870 0.855349 GCATGATCTTGCCGTCTACG 59.145 55.000 20.10 0.00 36.60 3.51
2365 2871 1.939974 TGCATGATCTTGCCGTCTAC 58.060 50.000 25.74 2.88 42.06 2.59
2366 2872 2.689553 TTGCATGATCTTGCCGTCTA 57.310 45.000 25.74 8.46 42.06 2.59
2367 2873 1.825090 TTTGCATGATCTTGCCGTCT 58.175 45.000 25.74 0.00 42.06 4.18
2368 2874 2.634982 TTTTGCATGATCTTGCCGTC 57.365 45.000 25.74 4.47 42.06 4.79
2369 2875 2.557924 TCTTTTTGCATGATCTTGCCGT 59.442 40.909 25.74 0.00 42.06 5.68
2370 2876 3.220507 TCTTTTTGCATGATCTTGCCG 57.779 42.857 25.74 12.16 42.06 5.69
2371 2877 3.869246 CCATCTTTTTGCATGATCTTGCC 59.131 43.478 25.74 11.97 42.06 4.52
2372 2878 3.308866 GCCATCTTTTTGCATGATCTTGC 59.691 43.478 23.04 23.04 43.07 4.01
2373 2879 3.550275 CGCCATCTTTTTGCATGATCTTG 59.450 43.478 0.00 4.25 0.00 3.02
2374 2880 3.444742 TCGCCATCTTTTTGCATGATCTT 59.555 39.130 0.00 0.00 0.00 2.40
2375 2881 3.018856 TCGCCATCTTTTTGCATGATCT 58.981 40.909 0.00 0.00 0.00 2.75
2376 2882 3.425577 TCGCCATCTTTTTGCATGATC 57.574 42.857 0.00 0.00 0.00 2.92
2377 2883 5.508489 CCTTATCGCCATCTTTTTGCATGAT 60.508 40.000 0.00 0.00 0.00 2.45
2378 2884 4.202040 CCTTATCGCCATCTTTTTGCATGA 60.202 41.667 0.00 0.00 0.00 3.07
2379 2885 4.046462 CCTTATCGCCATCTTTTTGCATG 58.954 43.478 0.00 0.00 0.00 4.06
2380 2886 3.953612 TCCTTATCGCCATCTTTTTGCAT 59.046 39.130 0.00 0.00 0.00 3.96
2381 2887 3.351740 TCCTTATCGCCATCTTTTTGCA 58.648 40.909 0.00 0.00 0.00 4.08
2382 2888 3.243201 CCTCCTTATCGCCATCTTTTTGC 60.243 47.826 0.00 0.00 0.00 3.68
2383 2889 4.199310 TCCTCCTTATCGCCATCTTTTTG 58.801 43.478 0.00 0.00 0.00 2.44
2384 2890 4.455606 CTCCTCCTTATCGCCATCTTTTT 58.544 43.478 0.00 0.00 0.00 1.94
2385 2891 3.181450 CCTCCTCCTTATCGCCATCTTTT 60.181 47.826 0.00 0.00 0.00 2.27
2386 2892 2.370189 CCTCCTCCTTATCGCCATCTTT 59.630 50.000 0.00 0.00 0.00 2.52
2387 2893 1.974236 CCTCCTCCTTATCGCCATCTT 59.026 52.381 0.00 0.00 0.00 2.40
2388 2894 1.148027 TCCTCCTCCTTATCGCCATCT 59.852 52.381 0.00 0.00 0.00 2.90
2389 2895 1.548269 CTCCTCCTCCTTATCGCCATC 59.452 57.143 0.00 0.00 0.00 3.51
2390 2896 1.638529 CTCCTCCTCCTTATCGCCAT 58.361 55.000 0.00 0.00 0.00 4.40
2391 2897 1.115930 GCTCCTCCTCCTTATCGCCA 61.116 60.000 0.00 0.00 0.00 5.69
2392 2898 1.115930 TGCTCCTCCTCCTTATCGCC 61.116 60.000 0.00 0.00 0.00 5.54
2393 2899 0.316841 CTGCTCCTCCTCCTTATCGC 59.683 60.000 0.00 0.00 0.00 4.58
2394 2900 0.965439 CCTGCTCCTCCTCCTTATCG 59.035 60.000 0.00 0.00 0.00 2.92
2395 2901 2.247358 CTCCTGCTCCTCCTCCTTATC 58.753 57.143 0.00 0.00 0.00 1.75
2396 2902 1.132881 CCTCCTGCTCCTCCTCCTTAT 60.133 57.143 0.00 0.00 0.00 1.73
2397 2903 0.263172 CCTCCTGCTCCTCCTCCTTA 59.737 60.000 0.00 0.00 0.00 2.69
2398 2904 1.002792 CCTCCTGCTCCTCCTCCTT 59.997 63.158 0.00 0.00 0.00 3.36
2399 2905 1.938596 TCCTCCTGCTCCTCCTCCT 60.939 63.158 0.00 0.00 0.00 3.69
2400 2906 1.457455 CTCCTCCTGCTCCTCCTCC 60.457 68.421 0.00 0.00 0.00 4.30
2401 2907 1.457455 CCTCCTCCTGCTCCTCCTC 60.457 68.421 0.00 0.00 0.00 3.71
2402 2908 2.695597 CCTCCTCCTGCTCCTCCT 59.304 66.667 0.00 0.00 0.00 3.69
2403 2909 2.445654 CCCTCCTCCTGCTCCTCC 60.446 72.222 0.00 0.00 0.00 4.30
2404 2910 3.160748 GCCCTCCTCCTGCTCCTC 61.161 72.222 0.00 0.00 0.00 3.71
2407 2913 3.844090 GTCGCCCTCCTCCTGCTC 61.844 72.222 0.00 0.00 0.00 4.26
2410 2916 3.827898 GTCGTCGCCCTCCTCCTG 61.828 72.222 0.00 0.00 0.00 3.86
2413 2919 4.176851 GTCGTCGTCGCCCTCCTC 62.177 72.222 0.00 0.00 36.96 3.71
2414 2920 4.719106 AGTCGTCGTCGCCCTCCT 62.719 66.667 0.00 0.00 36.96 3.69
2415 2921 3.680338 GAAGTCGTCGTCGCCCTCC 62.680 68.421 0.00 0.00 36.96 4.30
2416 2922 2.202453 GAAGTCGTCGTCGCCCTC 60.202 66.667 0.00 0.00 36.96 4.30
2417 2923 4.099170 CGAAGTCGTCGTCGCCCT 62.099 66.667 5.08 0.00 45.09 5.19
2425 2931 0.386985 AAGAACCTCGCGAAGTCGTC 60.387 55.000 11.39 6.13 42.22 4.20
2426 2932 0.663568 CAAGAACCTCGCGAAGTCGT 60.664 55.000 11.39 3.49 42.22 4.34
2427 2933 1.344942 CCAAGAACCTCGCGAAGTCG 61.345 60.000 11.39 0.00 43.27 4.18
2447 2953 1.267087 GCGCTATTTCAAGCTCGTCAC 60.267 52.381 0.00 0.00 40.49 3.67
2501 3127 3.184628 TCCTCATCTCCATCTTGTTGGT 58.815 45.455 0.00 0.00 38.01 3.67
2514 3140 1.384525 CGAAGTCGTCCTCCTCATCT 58.615 55.000 0.00 0.00 34.11 2.90
2515 3141 0.248702 GCGAAGTCGTCCTCCTCATC 60.249 60.000 2.25 0.00 42.22 2.92
2516 3142 1.810532 GCGAAGTCGTCCTCCTCAT 59.189 57.895 2.25 0.00 42.22 2.90
2550 3197 1.141657 TCTGGTGCTGTTTCAAGCTCT 59.858 47.619 0.00 0.00 43.90 4.09
2561 3208 1.536073 TTCCGTCTCCTCTGGTGCTG 61.536 60.000 0.00 0.00 0.00 4.41
2565 3212 0.961358 CGTCTTCCGTCTCCTCTGGT 60.961 60.000 0.00 0.00 0.00 4.00
2651 3302 0.685097 AGGCAGCTCTTCAAACCGTA 59.315 50.000 0.00 0.00 0.00 4.02
2658 3315 1.449070 CATCGCAGGCAGCTCTTCA 60.449 57.895 0.00 0.00 42.61 3.02
2723 3386 0.394192 CACAGGACAGGAGTGAAGCA 59.606 55.000 0.00 0.00 35.33 3.91
2764 3430 5.238583 ACAGTGAAGAGTATGCCAACTAAC 58.761 41.667 0.00 0.00 0.00 2.34
2773 3439 5.096169 CGGACTGTTACAGTGAAGAGTATG 58.904 45.833 23.57 0.00 45.44 2.39
2795 3461 6.893958 ATATGTTTACAAGCTTCAGTCTCG 57.106 37.500 0.00 0.00 0.00 4.04
2813 3479 4.758674 AGCCACGTACGACAGTATATATGT 59.241 41.667 24.41 0.00 35.01 2.29
2814 3480 5.292671 AGCCACGTACGACAGTATATATG 57.707 43.478 24.41 5.20 35.01 1.78
2816 3482 3.748048 GGAGCCACGTACGACAGTATATA 59.252 47.826 24.41 0.00 35.01 0.86
2817 3483 2.551459 GGAGCCACGTACGACAGTATAT 59.449 50.000 24.41 0.00 35.01 0.86
2818 3484 1.942657 GGAGCCACGTACGACAGTATA 59.057 52.381 24.41 0.00 35.01 1.47
2819 3485 0.737219 GGAGCCACGTACGACAGTAT 59.263 55.000 24.41 2.07 35.01 2.12
2820 3486 0.321919 AGGAGCCACGTACGACAGTA 60.322 55.000 24.41 0.00 0.00 2.74
2821 3487 0.321919 TAGGAGCCACGTACGACAGT 60.322 55.000 24.41 3.27 0.00 3.55
2822 3488 0.377554 CTAGGAGCCACGTACGACAG 59.622 60.000 24.41 10.79 0.00 3.51
2823 3489 1.651240 GCTAGGAGCCACGTACGACA 61.651 60.000 24.41 0.00 34.48 4.35
2824 3490 1.063811 GCTAGGAGCCACGTACGAC 59.936 63.158 24.41 10.85 34.48 4.34
2825 3491 0.679002 AAGCTAGGAGCCACGTACGA 60.679 55.000 24.41 0.00 43.77 3.43
2826 3492 0.525668 CAAGCTAGGAGCCACGTACG 60.526 60.000 15.01 15.01 43.77 3.67
2827 3493 0.179108 CCAAGCTAGGAGCCACGTAC 60.179 60.000 0.00 0.00 43.77 3.67
2828 3494 0.613853 ACCAAGCTAGGAGCCACGTA 60.614 55.000 0.00 0.00 43.77 3.57
2829 3495 0.613853 TACCAAGCTAGGAGCCACGT 60.614 55.000 0.00 0.00 43.77 4.49
2873 3539 1.529226 TTTTATGTCGTGCCACCCAG 58.471 50.000 0.00 0.00 0.00 4.45
2903 3576 8.429237 AATGGGTAATAAACAAGGATGAACAA 57.571 30.769 0.00 0.00 0.00 2.83
2952 3631 1.202330 CAAGGATGAGCAGAGAGGGT 58.798 55.000 0.00 0.00 0.00 4.34
2962 3641 0.905357 AGGGGACGAACAAGGATGAG 59.095 55.000 0.00 0.00 0.00 2.90
2975 3654 1.905637 AATCCGACAAAACAGGGGAC 58.094 50.000 0.00 0.00 0.00 4.46
3019 3699 6.490040 GCTAGAAATAATCTGGTTTATGCCCA 59.510 38.462 0.00 0.00 38.80 5.36
3027 3707 9.301897 ACTTCTTTTGCTAGAAATAATCTGGTT 57.698 29.630 0.00 0.00 38.80 3.67
3028 3708 8.870075 ACTTCTTTTGCTAGAAATAATCTGGT 57.130 30.769 0.00 0.00 38.80 4.00
3037 3717 9.897744 CACATCAAATACTTCTTTTGCTAGAAA 57.102 29.630 0.00 0.00 33.96 2.52
3046 3726 5.474532 TGCTGAGCACATCAAATACTTCTTT 59.525 36.000 1.40 0.00 37.52 2.52
3072 3752 0.673644 CTTCACCCTTGTCGCCGAAT 60.674 55.000 0.00 0.00 0.00 3.34
3073 3753 1.301401 CTTCACCCTTGTCGCCGAA 60.301 57.895 0.00 0.00 0.00 4.30
3082 3762 4.423625 AATATAAGAGCGCTTCACCCTT 57.576 40.909 13.26 12.66 35.56 3.95
3084 3764 4.381411 AGAAATATAAGAGCGCTTCACCC 58.619 43.478 13.26 0.00 35.56 4.61
3092 3772 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
3093 3773 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
3099 3779 9.145442 GGTAGTACTCCCTCTGTAAAGAAATAT 57.855 37.037 0.00 0.00 0.00 1.28
3101 3781 7.190501 AGGTAGTACTCCCTCTGTAAAGAAAT 58.809 38.462 0.11 0.00 0.00 2.17
3102 3782 6.559429 AGGTAGTACTCCCTCTGTAAAGAAA 58.441 40.000 0.11 0.00 0.00 2.52
3103 3783 6.150034 AGGTAGTACTCCCTCTGTAAAGAA 57.850 41.667 0.11 0.00 0.00 2.52
3106 3786 7.723172 GCTATTAGGTAGTACTCCCTCTGTAAA 59.277 40.741 10.79 0.00 32.72 2.01
3107 3787 7.073470 AGCTATTAGGTAGTACTCCCTCTGTAA 59.927 40.741 10.79 0.00 32.72 2.41
3108 3788 6.561838 AGCTATTAGGTAGTACTCCCTCTGTA 59.438 42.308 10.79 2.33 32.72 2.74
3110 3790 5.883180 AGCTATTAGGTAGTACTCCCTCTG 58.117 45.833 10.79 1.52 32.72 3.35
3111 3791 6.308566 CAAGCTATTAGGTAGTACTCCCTCT 58.691 44.000 10.79 2.68 32.72 3.69
3112 3792 5.477637 CCAAGCTATTAGGTAGTACTCCCTC 59.522 48.000 10.79 0.00 32.72 4.30
3113 3793 5.135705 TCCAAGCTATTAGGTAGTACTCCCT 59.864 44.000 12.22 12.22 32.72 4.20
3114 3794 5.392125 TCCAAGCTATTAGGTAGTACTCCC 58.608 45.833 0.00 0.00 32.72 4.30
3115 3795 6.973460 TTCCAAGCTATTAGGTAGTACTCC 57.027 41.667 0.00 0.48 32.72 3.85
3116 3796 9.833917 ATTTTTCCAAGCTATTAGGTAGTACTC 57.166 33.333 0.00 0.00 32.72 2.59
3123 3803 8.633561 GCAAGATATTTTTCCAAGCTATTAGGT 58.366 33.333 0.00 0.00 0.00 3.08
3130 3810 6.974622 CGTAATGCAAGATATTTTTCCAAGCT 59.025 34.615 0.00 0.00 0.00 3.74
3131 3811 6.198966 CCGTAATGCAAGATATTTTTCCAAGC 59.801 38.462 0.00 0.00 0.00 4.01
3132 3812 7.479980 TCCGTAATGCAAGATATTTTTCCAAG 58.520 34.615 0.00 0.00 0.00 3.61
3133 3813 7.397892 TCCGTAATGCAAGATATTTTTCCAA 57.602 32.000 0.00 0.00 0.00 3.53
3135 3815 6.413818 CGTTCCGTAATGCAAGATATTTTTCC 59.586 38.462 0.00 0.00 0.00 3.13
3136 3816 6.413818 CCGTTCCGTAATGCAAGATATTTTTC 59.586 38.462 0.00 0.00 0.00 2.29
3137 3817 6.094325 TCCGTTCCGTAATGCAAGATATTTTT 59.906 34.615 0.00 0.00 0.00 1.94
3138 3818 5.587043 TCCGTTCCGTAATGCAAGATATTTT 59.413 36.000 0.00 0.00 0.00 1.82
3140 3820 4.699637 TCCGTTCCGTAATGCAAGATATT 58.300 39.130 0.00 0.00 0.00 1.28
3142 3822 3.491964 CCTCCGTTCCGTAATGCAAGATA 60.492 47.826 0.00 0.00 0.00 1.98
3143 3823 2.550978 CTCCGTTCCGTAATGCAAGAT 58.449 47.619 0.00 0.00 0.00 2.40
3144 3824 1.404986 CCTCCGTTCCGTAATGCAAGA 60.405 52.381 0.00 0.00 0.00 3.02
3145 3825 1.006832 CCTCCGTTCCGTAATGCAAG 58.993 55.000 0.00 0.00 0.00 4.01
3146 3826 0.391927 CCCTCCGTTCCGTAATGCAA 60.392 55.000 0.00 0.00 0.00 4.08
3147 3827 1.219664 CCCTCCGTTCCGTAATGCA 59.780 57.895 0.00 0.00 0.00 3.96
3148 3828 0.529992 CTCCCTCCGTTCCGTAATGC 60.530 60.000 0.00 0.00 0.00 3.56
3149 3829 0.822164 ACTCCCTCCGTTCCGTAATG 59.178 55.000 0.00 0.00 0.00 1.90
3150 3830 2.305009 CTACTCCCTCCGTTCCGTAAT 58.695 52.381 0.00 0.00 0.00 1.89
3151 3831 1.683011 CCTACTCCCTCCGTTCCGTAA 60.683 57.143 0.00 0.00 0.00 3.18
3152 3832 0.107017 CCTACTCCCTCCGTTCCGTA 60.107 60.000 0.00 0.00 0.00 4.02
3153 3833 1.379576 CCTACTCCCTCCGTTCCGT 60.380 63.158 0.00 0.00 0.00 4.69
3154 3834 0.467659 ATCCTACTCCCTCCGTTCCG 60.468 60.000 0.00 0.00 0.00 4.30
3155 3835 1.413077 CAATCCTACTCCCTCCGTTCC 59.587 57.143 0.00 0.00 0.00 3.62
3156 3836 2.108970 ACAATCCTACTCCCTCCGTTC 58.891 52.381 0.00 0.00 0.00 3.95
3157 3837 1.831736 CACAATCCTACTCCCTCCGTT 59.168 52.381 0.00 0.00 0.00 4.44
3158 3838 1.486211 CACAATCCTACTCCCTCCGT 58.514 55.000 0.00 0.00 0.00 4.69
3159 3839 0.753262 CCACAATCCTACTCCCTCCG 59.247 60.000 0.00 0.00 0.00 4.63
3160 3840 2.176247 TCCACAATCCTACTCCCTCC 57.824 55.000 0.00 0.00 0.00 4.30
3161 3841 3.041946 ACATCCACAATCCTACTCCCTC 58.958 50.000 0.00 0.00 0.00 4.30
3162 3842 2.774234 CACATCCACAATCCTACTCCCT 59.226 50.000 0.00 0.00 0.00 4.20
3163 3843 2.505819 ACACATCCACAATCCTACTCCC 59.494 50.000 0.00 0.00 0.00 4.30
3164 3844 3.055094 ACACACATCCACAATCCTACTCC 60.055 47.826 0.00 0.00 0.00 3.85
3165 3845 4.184629 GACACACATCCACAATCCTACTC 58.815 47.826 0.00 0.00 0.00 2.59
3166 3846 3.055094 GGACACACATCCACAATCCTACT 60.055 47.826 0.00 0.00 38.77 2.57
3167 3847 3.270877 GGACACACATCCACAATCCTAC 58.729 50.000 0.00 0.00 38.77 3.18
3212 3892 3.997762 ACAGCCGTGATAAAACACAGTA 58.002 40.909 0.00 0.00 40.34 2.74
3257 3937 1.876156 GCACTCTGAACCCACTTGAAG 59.124 52.381 0.00 0.00 0.00 3.02
3259 3939 1.131638 AGCACTCTGAACCCACTTGA 58.868 50.000 0.00 0.00 0.00 3.02
3260 3940 2.037772 AGTAGCACTCTGAACCCACTTG 59.962 50.000 0.00 0.00 0.00 3.16
3261 3941 2.330216 AGTAGCACTCTGAACCCACTT 58.670 47.619 0.00 0.00 0.00 3.16
3272 3952 6.094048 TGAAAGGAATGCATTTAGTAGCACTC 59.906 38.462 14.33 0.00 44.49 3.51
3287 3967 7.141100 ACCGTAAGTAAACATGAAAGGAATG 57.859 36.000 0.00 0.00 0.00 2.67
3307 3987 7.739498 AATCATAACACAAACTCTTAACCGT 57.261 32.000 0.00 0.00 0.00 4.83
3308 3988 9.537848 GTTAATCATAACACAAACTCTTAACCG 57.462 33.333 0.00 0.00 40.93 4.44
3327 4015 6.432162 AGATTGCAAAGAAGCTCTGTTAATCA 59.568 34.615 1.71 0.00 34.99 2.57
3395 4117 8.415192 AGTACATCGACTTATATTCGCAAAAA 57.585 30.769 0.00 0.00 36.40 1.94
3396 4118 7.997107 AGTACATCGACTTATATTCGCAAAA 57.003 32.000 0.00 0.00 36.40 2.44
3397 4119 7.997107 AAGTACATCGACTTATATTCGCAAA 57.003 32.000 0.00 0.00 37.90 3.68
3398 4120 7.703197 TGAAAGTACATCGACTTATATTCGCAA 59.297 33.333 0.00 0.00 38.75 4.85
3399 4121 7.197703 TGAAAGTACATCGACTTATATTCGCA 58.802 34.615 0.00 0.00 38.75 5.10
3400 4122 7.618964 TGAAAGTACATCGACTTATATTCGC 57.381 36.000 0.00 0.00 38.75 4.70
3401 4123 9.995379 CATTGAAAGTACATCGACTTATATTCG 57.005 33.333 0.00 0.00 38.75 3.34
3404 4126 9.477484 GGTCATTGAAAGTACATCGACTTATAT 57.523 33.333 0.00 0.00 38.75 0.86
3405 4127 8.471609 TGGTCATTGAAAGTACATCGACTTATA 58.528 33.333 0.00 0.00 38.75 0.98
3406 4128 7.327975 TGGTCATTGAAAGTACATCGACTTAT 58.672 34.615 0.00 0.00 38.75 1.73
3410 4132 7.534085 TTATGGTCATTGAAAGTACATCGAC 57.466 36.000 0.00 0.00 0.00 4.20
3424 4146 7.006509 CCAGGTCCTATGAAATTATGGTCATT 58.993 38.462 0.00 0.00 36.00 2.57
3430 4152 8.874744 AATCATCCAGGTCCTATGAAATTATG 57.125 34.615 8.18 0.00 33.60 1.90
3483 4211 9.453830 AGGAGTTTATATTTCTCTATGGAAGGT 57.546 33.333 0.00 0.00 0.00 3.50
3484 4212 9.936759 GAGGAGTTTATATTTCTCTATGGAAGG 57.063 37.037 0.00 0.00 0.00 3.46
3487 4215 9.661954 AGTGAGGAGTTTATATTTCTCTATGGA 57.338 33.333 0.00 0.00 0.00 3.41
3488 4216 9.921637 GAGTGAGGAGTTTATATTTCTCTATGG 57.078 37.037 0.00 0.00 0.00 2.74
3489 4217 9.921637 GGAGTGAGGAGTTTATATTTCTCTATG 57.078 37.037 0.00 0.00 0.00 2.23
3490 4218 9.890915 AGGAGTGAGGAGTTTATATTTCTCTAT 57.109 33.333 0.00 0.00 0.00 1.98
3491 4219 9.137459 CAGGAGTGAGGAGTTTATATTTCTCTA 57.863 37.037 0.00 0.00 0.00 2.43
3492 4220 7.621683 ACAGGAGTGAGGAGTTTATATTTCTCT 59.378 37.037 0.00 0.00 0.00 3.10
3493 4221 7.787028 ACAGGAGTGAGGAGTTTATATTTCTC 58.213 38.462 0.00 0.00 0.00 2.87
3494 4222 7.741554 ACAGGAGTGAGGAGTTTATATTTCT 57.258 36.000 0.00 0.00 0.00 2.52
3518 4246 4.574674 AACAAATCCCAGCTACTCATCA 57.425 40.909 0.00 0.00 0.00 3.07
3530 4258 2.738314 GCATTGTGCTGAAACAAATCCC 59.262 45.455 1.29 0.00 42.98 3.85
3555 4283 4.634004 TCATTTGTGACGTCTGTTTCAGTT 59.366 37.500 17.92 0.00 32.61 3.16
3568 4296 7.897575 AGTGAGAAAGTCTATCATTTGTGAC 57.102 36.000 0.00 0.00 0.00 3.67
3569 4297 8.908786 AAAGTGAGAAAGTCTATCATTTGTGA 57.091 30.769 0.00 0.00 0.00 3.58
3601 4337 4.627058 TGAAGTTAACTGAATGTGCGAGA 58.373 39.130 9.34 0.00 0.00 4.04
3608 4344 6.580041 GCATGTGTTCTGAAGTTAACTGAATG 59.420 38.462 9.34 5.27 0.00 2.67
3615 4351 4.713553 TCCAGCATGTGTTCTGAAGTTAA 58.286 39.130 0.00 0.00 32.26 2.01
3618 4354 2.936919 TCCAGCATGTGTTCTGAAGT 57.063 45.000 0.00 0.00 32.26 3.01
3625 4361 1.274167 CCTTGCATTCCAGCATGTGTT 59.726 47.619 0.00 0.00 45.19 3.32
3627 4363 1.179152 TCCTTGCATTCCAGCATGTG 58.821 50.000 0.00 0.00 45.19 3.21
3628 4364 3.675995 TCCTTGCATTCCAGCATGT 57.324 47.368 0.00 0.00 45.19 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.