>input_sequence_46255
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------------------ATGACCGACCCCTACCGTGCGCTATGCTTCGGGATGCGCTTCAACCCGAAGGGCGAGGAGGC
CATTGCTGTGTACCTCGTGCCATGGCTCCTCCGCCAGCCGCTGCCTGACACCGCCGTA---ATCATCCATGAAGCGGAGG
TTTACAAGTCCGAGCCAAAGGATCTCGCCGCCGTGTGGCCCCGCCTTCCCAACACCCACCACCGGTTCTTCTTCACCACC
TGCAGGCGTCAGAAAGCCGGGTCGGGCTTCAGGATGAAGCGCACCGCGGGCGCCGGCAGGTGGGTCACGAGTGACAAGAC
GGAGGTCAAGAACAGCGCCGACGAGACGATCGGATACCACGAGAAACTTCGCTACGAGTACAAGGGCCAGAGCGGCAAGT
CCGAGTGGCTCATGGACGAGTATCACTGCCGCGGATTCGACGAATACGCCCTCCTCCATGACGGCA-------AGGAGGA
GCGCGTCCTGTGCAGGCTCTACGTCTCGCCCAACGCCAAGCCGGGATCCGTCGCGCTTCAACAATCTGCTGCCGCGGATC
ACCTCATGCCTCATCAGCGTAGCATCTGCCGCGGCGTCCGTGGAATTCA------AGGACCCCCGA------AGCAGCAG
CAGCAGCTGCCGCGGCGTCCACAAGAACAGGTTGCTGTGCCTCCCGCGACCACGCAGACGCAGGCGCAGGCCGGGATGAG
GAAGCCAGCGCCACAAGTTGCTGACCGGCAGAGCCCC------------------------------ATGTGGTCCTCTG
CCACTGCCAGTCCGAAGCCAGGATACGTCGCGCGCCAACAGGCTGCAACAGGAGATCATCGTCTTCGAGTTGAAGAACCC
GCCATCATGGCCG---CGCCGCGTCCACAAGCACGACCGCA------GCAGGTGATGACGAAGC---CAGCGACACCGCG
CGGCCTTGCTCTTTCGTCGGGGCAACAACAGCAAGGTCGCGTCACGGTTCCTGCGCCGATGACCACGCAGCAG---GCGG
CAAAGAGGCCGGCGCCTCCCATTGCCGAGCCGCCGCAACCCAAGCGGATGCGTGCTGCTGCTCTCGCTCCG---------
------GCGGTGAAGCCGGCGTCCGCAGCACCACCT---------------------AGACAATCCATCCTATCGTGGGA
GCCGGCAAAGCGACCGTCCTGGTTGCCGCCGCAGCAGCCGAATTTCCTGTCGGCGCCGCTGCCTCAGCGCCAGGCGACCA
AGGACAAGG------------------------AGGGCCAGAGCACGATCAGGCAAGAAGGCCACACGAGGACGATCCAA
CAAAAGGCCTGCAACGAGGACACGGACGAGGTGTTGCCAGAGAAGGCGCAAGATGTAGACGGCAAGATCATCCAACAAGA
TGGCGATGAGGAGGAGTTTGCGAGGTTTTTGGATGACGTGCTTGAAGTAGCACCAGAGGAGACGGAAGACGTAGACGGCA
AGATCATGCAAAAAGATGGCGATAAGGAGGAGGAGCAGGAGGAGGGCGACGACGACTTCGCGAGGTTCTTGGGTGACGAG
CTTGAAATAGCGCCAGAG--------------------------------------------------------------
----------------------------------------------------------GAGACAGAAGACGTAGAAGGCA
AGGCCGACCAACAAGATGGAGATGAGGAG---------------------GACGACTTCGCGAGGTTTTTGGATGAAGAG
CTTGAAACAGCACCAGAGGAGACGGAAGACGTACAAGGCAAGGCCATCGAAAAAGATGGCGA-T---GAGGAGGAGCACA
TGAGCACCTTGTGGTGA---------------------------------------------------------------
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>chr4B_1_TraesCS4B01G132500
AACAGAAAAATGGGTAGCAGAGAAAAACAAAAAAGTGCCGCGACGGGCTCCTGAGTTGCAAAAAACACGAATTGCGACGC
AAGTAGATCAGATGGGAAGCAGTGAACGAGACAAAATTATAATTCACCTATCTGAGTTTGAGCAAATCCGAAATAGAAAA
AGAGAAAATAGAAAAGGGAAGGAAACCGGAATAAAGCAGTAATAAA---------------AAAAACTTCTAAAACCAGC
GGCTCGCACATGGATGACATACATGCACTCTATCCGACCCACACGGGCAAG---AGATCGATCTGTACTTGTGGGCCTAT
AATA-----------CAACAAACAGATACACAAACAGATAAATTGGCCGCGCAACGTCGCTCTACCGGCCTGTAGGTAGG
ATCGGCGTTGCAGGCTGGTAGAGCAACATGTTTTAGCTGTTTGTTTCAGCTTCAGATTAATCCTATCAAAATCTGCCTTA
TAAATCTGAAACAAACAGGGCATAATTGGACGGTAATGGGCGTGAATGAGAGTATGAGACGATACTAAAGCTCACCCAAC
TAGCTGAGTTTTAGCCATTGAAAGAAATAGCATGCTATGACAAAATAGTGTAGTCCTTAAAATACGCTATTAGCATGCTA
TACCTTATTATCGCGTGCTATTAGCAAAATACTATACACTGATTTATTTAGTAAGACATTTTTA----------------
--------------------------------------------------------------------------------
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------TAAAATCTATAGCGTGCTATTACCGACGCGCGTTTTTTCCCCCACTGGTTTTACCACATCCATATGAAGGAAAA
AGTGTTACGTTCTTGTGTTTTGTCAAATCAGCACTTGTGTCGGACTGGAATCGGAATCGTGAATCACCACGGAACAAATC
AAAGTAGTTCGTTTTCATATACACCACGGACCCCCATACTAGTATAAGTAGTCACCACCCGCCTTCCCATACGCCCGCCC
CGAGCTGACCTACCTTCCTACAAATCGCTCATCGCCCAGCCCACCGGCGAAACCTCTCAAGTCAGT-------CAGGAGC
ACGGCGACGCCGACAACAATGACCGACCCCTACCGTGCGCTATGCTTCGGGATGCGCTTCAACCCGAAGGGCGAGGAGGC
CATTGCTGTGTACCTCGTGCCATGGCTCCTCCGCCAGCCGCTGCCTGACACCGCCGTA---ATCATCCATGAAGCGGAGG
TTTACAAGTCCGAGCCAAAGGATCTCGCCGCCGTGTGGCCCCGCCTTCCCAACACCCACCACCGGTTCTTCTTCACCACC
TGCAGGCGTCAGAAAGCCGGGTCGGGCTTCAGGATGAAGCGCACCGCGGGCGCCGGCAGGTGGGTCACGAGTGACAAGAC
GGAGGTCAAGAACAGCGCCGACGAGACGATCGGATACCACGAGAAACTTCGCTACGAGTACAAGGGCCAGAGCGGCAAGT
CCGAGTGGCTCATGGACGAGTATCACTGCCGCGGATTCGACGAATACGCCCTCCTCCATGACGGCA-------AGGAGGA
GCGCGTCCTGTGCAGGCTCTACGTCTCGCCCAACGCCAAGCCGGGATCCGTCGCGCTTCAACAATCTGCTGCCGCGGATC
ACCTCATGCCTCATCAGCGTAGCATCTGCCGCGGCGTCCGTGGAATTCA------AGGACCCCCGA------AGCAGCAG
CAGCAGCTGCCGCGGCGTCCACAAGAACAGGTTGCTGTGCCTCCCGCGACCACGCAGACGCAGGCGCAGGCCGGGATGAG
GAAGCCAGCGCCACAAGTTGCTGACCGGCAGAGCCCC------------------------------ATGTGGTCCTCTG
CCACTGCCAGTCCGAAGCCAGGATACGTCGCGCGCCAACAGGCTGCAACAGGAGATCATCGTCTTCGAGTTGAAGAACCC
GCCATCATGGCCG---CGCCGCGTCCACAAGCACGACCGCA------GCAGGTGATGACGAAGC---CAGCGACACCGCG
CGGCCTTGCTCTTTCGTCGGGGCAACAACAGCAAGGTCGCGTCACGGTTCCTGCGCCGATGACCACGCAGCAG---GCGG
CAAAGAGGCCGGCGCCTCCCATTGCCGAGCCGCCGCAACCCAAGCGGATGCGTGCTGCTGCTCTCGCTCCG---------
------GCGGTGAAGCCGGCGTCCGCAGCACCACCT---------------------AGACAATCCATCCTATCGTGGGA
GCCGGCAAAGCGACCGTCCTGGTTGCCGCCGCAGCAGCCGAATTTCCTGTCGGCGCCGCTGCCTCAGCGCCAGGCGACCA
AGGACAAGG------------------------AGGGCCAGAGCACGATCAGGCAAGAAGGCCACACGAGGACGATCCAA
CAAAAGGCCTGCAACGAGGACACGGACGAGGTGTTGCCAGAGAAGGCGCAAGATGTAGACGGCAAGATCATCCAACAAGA
TGGCGATGAGGAGGAGTTTGCGAGGTTTTTGGATGACGTGCTTGAAGTAGCACCAGAGGAGACGGAAGACGTAGACGGCA
AGATCATGCAAAAAGATGGCGATAAGGAGGAGGAGCAGGAGGAGGGCGACGACGACTTCGCGAGGTTCTTGGGTGACGAG
CTTGAAATAGCGCCAGAG--------------------------------------------------------------
----------------------------------------------------------GAGACAGAAGACGTAGAAGGCA
AGGCCGACCAACAAGATGGAGATGAGGAG---------------------GACGACTTCGCGAGGTTTTTGGATGAAGAG
CTTGAAACAGCACCAGAGGAGACGGAAGACGTACAAGGCAAGGCCATCGAAAAAGATGGCGA-T---GAGGAGGAGCACA
TGAGCACCTTGTGGTGATGGAT------ACGGTTTGAAGAGCTGCCTGCGATGAAGAAGAAGGCATCATCG---GCATGC
GAGGTCACTA---GTACTCGTAGAATGCTTCACTCCTGTCCTGTGATGAGTAGCTAGGATT---TTTCCGTTAGTTGGCA
TACTCTTCACTGTAACAGTCCGAGACTGAAGCTTGTAAACATATATACTGTCGTACGTGGCTCCTAGCTTGGTAGTATAA
AAGCTGGAGAGTGGGTGGCTGGGTGGCACGACATA-------AAAACTATATTTTTTGTTCATCCTTGTTTATTACCCAT
TTTGC------TCCTTTCATTTTTGGCACTACCCTCTCTGCTCATCCTTGTTCGTCCCCTGTTTTGTCGGATTTATTTAC
TAC-GTACTGTTCTTCGTTGGGCATAAACCAGATTATTTCTAGCAAAAGAAGTATTTGATGTGCTCAGCAAATTCGGCGA
CAAGGGTGAAGCGCTCTTATATTTCTTTACAGAGGGAGTACTACCTAATAGCTTGGAAAAATATCTTGCATTACGGAACG
GAGGGAGTAGGATTGTGGATGTGTGTCCAAATTCTTGTGGAAATGAATACATACTGTGTTTTATCACGGCTGTAAATATA
TGCATAGAATTTTTTTCTTCAAGTGGGTTCAGAGTGCTACTAAATGCATTCCTTTCATGTTTACTTACGG--------TT
AAGAGTTTGTGTTATGATTAACAGAGCTTCTTTGCAATCTGATGCTCACGGCCTT-------------------------
-----ATCTTA----GGTCTAATTCTGTGTACTTTTTTTTTGCGAATATAAGTCGATGTACTTTCAATGACCATAATTTC
AT---AGGACC---TGGATGATTTCATCATTGACAGTGTATAGCCATTCTACCTTCCATAGAGAAATATAAACTCCTCAC
TCCTGTGATGAGTAGCTGGGATTTGTTTCAGCACAATGCAACAACTGAAACAGACGTCACAAATGATAGACTTTCTCA--
------CTTTTTTTGCTCTCGCACATTCAGTTAACTTCAGAACACATGCTGGAATGCAAGGA
>chr4A_1
AACAGAAAAATGGATCATAGAGGGAAAAAAAGG-GTGCCGCGATGGGCGTCCGGGTTGCAAAAAGCACGAATCACGATGC
AAGTAGATCGGATGGGAAGCAGTGAATGAGACAAAATAAAAATTCACCTATCTGAGTTTTAGCAAATCCAAAACAAAGAA
AAA-AAAATAGAAAAGGGAAGGAAACCGGAATAAACCATTAATAAACAAAAAATAGAAAAGAAAAACTTCTAAAACCAGC
GGCTCGCACATGGATAACATACATGCACTCTAGCCGATGCACACGAGCAGAAGAAGATCGATCTGTACCTGTGCTAGCCA
CGTAGGCACACAACGCAACAAATAGCAACACAAACAGATAAATTGGCCGTGCAGTGTTGCTTTACCGGCCTGCGGGTAGG
ATCGACGCTACAGGCCGGTAGAGCAACGCTT-------------------------------------------------
------------------------ATTGAACGGTAATAGGTGTGAATGAGAGTACGAGATGATACTAAAGCTCACCCAGC
TAGCTGAGTTTTAGCCATTGAAAGAAATAGCATGCTATGACAAAATAGTGTAGTCCTTCAAATGTGCTATTAGTATGCTA
TACCGCGTTATCGCGTGCTATTAGCGAGACATTATACACTCATTTATTTAGTAAGACATTTCTCTAAAACCTCGGGGGGC
AGAGAGATGTGGTTCGGCCGGTCGATCGGCCGTTTTGACCTGGCTGGCTGGTTCCGACCGGGCCGAGCCACTAATAGCCG
TGAGTGGGCGCCGTTAGCCGTTAGGGTACCCGTCGGCCTGCCATGTGAGCCAGCCCTGTCAGGTAAAGCTGTTAAACTGG
CTAAAATGACGATCAACACGACTTGTAATTTTTTGTCACAAAATTTGAAATTTTCGATAGTTATTAGTCACTTTTTTTAA
AGTGGTAGTTCCGTGGGACGGTAAGCTTTAATGTAGTAGTCTTTTGTCAAATTGGAGTACTTGATTTATTTAGTAAGACA
TTTCTCTAAAACCTATAGTGTGGTATTAGTGACGCGCGTTATTTTTTTCGCTGTTTTTAGCACATCCATATGAAGAAAAA
AGTGTTACGTTCTTGTGCTTTATGAAATCAGCACTTGTGTCGGACTGCAATCGGAATCGTGAATCG------------TC
CTAGTAGTTCGTTTTCATACACACCACGGACTCCCTTACGAGTATAAGTAGTCAACACCCGCCTTCCCATACGGCCGC--
---GCTGACCTACCTTCCTCCAAATCGCTGATCGCCCAGCCCACCGGCGAAGC----CTCTCAAGT-------CAAGAGC
ACGGCGACGCCGAGAACAATGACCTACCCCTACCGTGCGCTATGGTTCGGGATGCGCTTCAACCCGACGGGCGAGCAGGC
CATTGCTCGGTACCTCGTGCCATGGCTCCTCGACCAGCCGCTGCCTGACGCCGCCGGAATCATC---CATGAAGCGGAGG
TTTACAAGTCCGAGCCAAAGGATCTCGCTGCCGTGTGGCCGCGCCTTCCCAACACCCACAACCGGTTCTTCTTCACCACC
TGCAGGCGCCAGAAAGCCGGGTCGGGCTTCAGGATGAAGCGCACCGTCGGCGCCGGCAGCTGGGTCTCGAGTGACAAGAC
GGAGGTGAAGAACAGCGCCGACGAGATCATCAGATACCACGAGAAACTTCGGTACGCGTACAAGGGGCAGAGCGGCAAGT
CGGAGTGGCTCATGGACGAGTACCACTGCCGCGGATTCGACCAATACGCCCTCCTCCATGACGGCAAGGAGCCAGGAGGA
GCGCGTCCTGTGCAGGCTCTACGTCTCGCCCAACGCCAAGCCGGGATCCCTCGCGCTTCAGCAATCTGCTGCCGCGGATC
ACCTCATGCCTCGTCAGCGTACCATCTGCCGCGGCGTCCGTGGAATTCA------AGGACCCCCGCAGCAGCAGCAGCAG
CAGCTGCTGCTGCGGCGTCCACAAGAAGAGGTTGGTGTGCCTCCCGCGACCACGCACACGCAGGCGCAGGCCGGGATGAG
GAAGCCAGCGCCACAAGTTGCTGAGCGGCAGAGC---------------C---------------CCATGTGGTCCTCTG
CCACTGCCAGTTCGAAGCCGGGATACGTCGCGCGCCAACAGGCTGCAACAGGAGATCATCGTCTTAGAGTTGAAGAACCC
GCCATCATGGCCGCGCCGCCGCGTCCACAAGCACGACCGCA------GCAGGTGATCGTCGGGGCAACAGAGACGCCACG
CGGCCTTGCTCTTTCGTCGGGGCAACA---GCAACGTCGCGTCACGGTTCCTGCGCCGATGACCACGCAGCAGCAGGCGC
CCAAGAGGCCGGCGCCTCCCATTGCCGAGCCGCCGCACCCCAAGCGGATGCGTGCTGCTGCTCTCGCTCCAGCTCCCACA
CTTGCCGCCGTGAAGCCGGCGTCAGCAGCACCACCGCATCTCGCGGTGCCACCTACTAGACGATCCATCCTGTCGTGGGA
GCCGGCAAAGCGACCGTCCTGGTGTCCGCCGCAGCAGCCGAATTTCCTGTCGGTGCCTCTGCCTCAGCGCCAGGCCACCA
AGGACAAGGGGGCCGACCTTGGATTAATGGCAGAGGGCCAGAGCACGATCCAGCAAGGAGGCCACAAGAGGACGATCCAA
CAAAAGGCCTGCAACGACTACACGGACGAGGTGTTGCCAGAGAAGGCGCAAGATGTAGACGGCAAGATGATCCAACAAGA
TGGCGATGAGGAGGAG----------------------------------------------------------------
-----------------------------------------------------GAGTTGGTGAGGTTCTTGGATGACGAG
CTTGAAATGGCGACAGAG--------------------------------------------------------------
----------------------------------------------------------GAG-------------------
--------------------------------------------------------------------------------
---------------------ACGGAAGACGTAGAAGGCAAGGCCATCGAAGAAGATGGCGATT---GAGGAGGAGGACA
TGAGCACCATGTGGTGATCGTGATGGAGACGGTTGGAAGAGCTGCCTGCGATGAAGAAGAAGGCATCATCG---GCATGC
GAGGTCACTA---GTATTAGTAGAAGGCTTCCCTCCTGTCCTGTGATGAGTAGCTAGGATT---TTTCCTTTAGTTGCTA
TACTCTTCACTGTAACAGTCTGAGGCTGAAGCT---------------GT-----CGTGGCTCCTAGCTTGCTAGTATAA
AAGCTGGAGAGTGGGTGGTTGGGTGGCACGACATATATATGAACAACTCTATT------------TTCTTTATTACCCAT
TTTGCCCCGCCTCCTTTCATTTTTGGCACTGCCCTCTCTGTTCATCCTTGTTCTTCTCCTGTTTTTGCAGAGGTTGTACC
T------CTGTTCATCGTCAGGCATAGGTCATATTAGTTCTAGCACAAGAAGTATTTGATGTGCTCAGCAACATCAACGA
CGATGGTGAAGATAATGATTGGCTCACCAAGCCTCTTTCAGATCGCAATGATATC-CCATACTAGC--------------
---------GGATTGTGGATGTGTGTCCAAATTCTTGTGGAAATGAATACAGAC--TGTTTTATCACGGCTGTAAATAGT
TGTGAAGAATATTTTCTTCG-AGTGGGTTCACAGTGCTACTAAATGAATTCCTTTCATGTTAACTT---G--------TT
AAGAGTTTGTGTTACGATTAACAGAGCTTCTTTGCAATCTGATGCTCACGGCCTTAGGTTGGCTTGTTGGCGGATGCAAA
CGGTTATCTTA----GGTC-----------------------------TAATTCCATGCACTTTCTATGACTATAATTTA
ATAGTAGGACCTAGTATATGATTTCATCATTGACAGTGTATAGCCAT---------------GAAATATGAACTCCTCAC
TCCTGAGATGAGTAGCTAGGATTTGTTTCAGCACAATGCAACGACTGAAACAGACAGCATAAATGAAAGACTTTGTCGCA
ATTTTTCCTTTTTTGCACTCGCATATTCAGCTACCTTCAGGAGCCATGCTGGAA--------
>chr4D_718
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------------------------------------------------CACTGGTTTTAGCACATCCGTATGAA-AAAAA
AGTGTTACGTTCTTGTGCTTGGTCAAATCAGCACTTGTCTCGGACTGGAATCGGAATCGTCCCAGCC----------ATC
CTAGTATTCCGTTTTCATATACACCACGGAGTCCCATACTAGTATAACTAGTCAACACCCGCCTTCCCATACGGCCGC--
---GCTGACCTACCTTCCTCCAAATCGCTCATCGCCCAGCCCACCGGCGAAACCCTGCTCTCAAGTAAGGACCCAGGAGC
ACGGCGACGCCGGGAACAATGGCCGACCCCTACCGTGCGCTATGCTTCGGGATGCGCTTCAACCCGACGGGCGAGCAGGC
CATTGCTCGGTACCTCGTGCCATGGCTCCTCGACCAGCCGCTGCCTGACGCCGCCGGAATCATCATCCATGAAGCGGAGG
TTTACAAGTCCGAGCCAAAGGATCTCGCCGCCGTGTGGCCCCGCCTTCCCAACACCCACCACCGGTTCTTCTTCACCACC
TGCATCCGCCAGAAAGCAGGGACGGGCTTCAGGATGAAGCGCACCGCCGGCGCCGGCAAGTGGGTCACGAGTGACAAGAC
GGAGGTGAAGAACAGCGCCGACGAGACGATCGGATACCACGAGAAACTTCGGTACGCGTACAAGGGGCAGAGCGGCAAGT
CGGAGTGGCTCATGGACGAGTACCACTGCCGCGGATTCGACCAATACGCCCTCCTCCATGACGGCA-------AGGAGGA
GCGCGTCCTGTGCAGGCTCTACGTCTCGCCCAACGCCAAGCCGGGATCCCTCGCGCTTCAACAATCTGCTGCCGCGGATC
ACCTCATGCCTCATCACCGTAGCATCTGCCGCGGCGTCCGTGGAATTCA------AGGACCCCCGCAG------------
CAGCAGCTGCCGCGGCGTCCACAAGAACAGGTTGCTCTGCCTCCCGCAACCACGCAGACGCAGGCGCAGGCCGGGATGAG
GAAGCCAGCGCCACAAGTTGCTGACCGGCAGAGCCCCATGGTTCCTGCGC---------------CCATGTGGTCCTCTG
CCACTGCCAGTTCGAAGCCGGGATACGTCGCGCGCCAACAGACTGCAACAGGAGATCATCTCCTTCGAGTTCAAGAACCC
GCCATCATGGCCG---CGCCGCGTCCACAAGCACGACCGCA------GCAGGTGATGACGAAGC---CAGCGACGCCGCG
CGGCCTTGATCTTTCGTCGGGGCAGCA---GCAATGTCGCGTCACGGTTGCTGCGCCGATGACCACGCAGCT---GGCGC
CCAAGAGGCCGGCACCTCCCATTGCGGAGCCGCCGCACCCCAAGCGGATGCGTGCTGCTGCTCTCGCTCCGGCTCACACA
CGTCCCGCGGTGAAGCCGGCGTCAGCAGCACCGCCGCCTCTCGCAGTGCCACCC---AGACGACCCATAGTGTCGTGGGA
GCCGGCAAAGCGACCGTCCTGGTGTCCGCCGCAGCAGCCGAATTTCCTGTCGGCGCCGCTGCCTCAGCGCCAGGCGACCA
AGGACAAGGGAGCCGACCTTGGATTAATGGCAGAGGGCCAGAGCACGGTCCAGCAAGGAGGCCACAAGAGGACGATCCAA
CAAAAGGCCTGCAACGAGGACACGGACGAGGTGTTGCCAGAGAAAGCGCAAGATGTAGACGGCAAGATGATCCAACAAGA
TGGCGATGAGGAGGAC----------------------------------------------------------------
-----------------------------------------------------GAGTTCGTGAGGTTCTTGGATGGCGAG
CTCGAAATAGCGCCAGAGGAGACAGAAGACGTAGAAGGCAAGGCCGTCCAACAAGATGGCGGTGAGGAGGACGAGCAGGA
GGAGGGCGACGACGACTTCGCGAGGTTTTTGGATGAGGAGCTTGAAATAGCGCCAGAGGAG-------------------
--------------------------------------------------------------------------------
---------------------ACGGAAGACGTACAAGGCAAGGCCATCGAAGAAGATGACGACGAGGAGGA--GAGGTTA
TGAGCACCTTGTGGTGATCGTGATCAA--------GAAGAGCTGCCTGCGATGAAGAAGAAGAAGGCATCA---GCATGC
GAGGTCACTA---GTA------GAAGGCTTCACTCCTGTCCTGTGATGGGTAGCTAGGATTTTTTTTCCTTTAGTTGGTA
TACTCTTCACTGTAACAGTCTGAGACTGAAGCT---------------GT-----CGTGGCTCCTAGCTTGGTAGTATAA
AAGCTGGAGAGTGGGTGGTTGGGTGGCACGACATATATATGAAAAACCATATTTTCTGTTCATCCTTGTTCTT-------
--------------------------------------------------------CCCTGTTTTGTCGGATTTATTTAC
TACTGTACTGTTCTTCGTCGGGCATAGGCCAGATTAGTTCTAGCACA-GAAGTATTTGATGTGCTCAGCAACATCGGCGA
CGATGGTGAAGACAATGATTGGCTCACCAAGCCTCTTTCAGACCACAGTGATATAACCATACTAGC--------------
-------TAGGATTGTGG--GTGTGTCCAAATTCTTGTGGAA-TGAATACAGAATGTGTTTTATCACGGCTGTAAATAC-
TGCATAGATTTTTTTTT----------------------CTTAATGAATTCCTTTCATGTTTACTT---GTGGTTAGTTT
AAGAGTTTGTGTTACGATTAACAGAGCTTCTTTGCAATCTGATGCTCACGGCCTTAGGTTGGTTTGTTGGCGGATGCAAA
CGGTTATCTTAATTAGGTC-----------------------------TAATTCCATGCACTTTCTATGACTATAATTTA
ATAGCAGGACC---TATATGATTTCATCATCGACAGTGTATAGCCAT---------------GAAATATGAACTCCTCAC
TCCTGAGATGAGTAGCTAGGATTTGTTTCAGCACAATGCAACGACTGAAACAGACAGCATAAATGACAGACTTCGACGCA
AATTTTCTTTTTTTGCACTCGCATATCCAGCTACCTTCAGGAGCCATGCTGGAA--------
>chr4D_745
GAAAAC--------------------------------------------------------------------------
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AGTTTTACGTTCTTGTGCTTTGTCAAATCAGCACTTGTGTCGGACTGGAATCGGAATCGTGAATCG------------TC
CTAGTAGTTCGTTTTCATATACACCACGGACTCCCATACTAGTATAAGTAGTCACCACCCGCCTTCCCATACGGCCGC--
---GCTGACCTACCTTCCTCCAAATCGCTCATCGCCCAGCCCACCGGCGAAACCCTGCTCTCAAGT-------CAGGAGC
ACGGCGACGCCGACAACAATGACCGACCCCTACCGTGCGCTATGCTTCGGGATGCGCTTCAACCCGACGGGCGAGCAGGC
CATTGCTATGTACCTCGTGCCATGGCTCCTCGACCAGCCGCTGCCTGACGCCGCCAGA---ATCATCCATGAAGCGGAGG
TTTACAAGTCCGAGCCAAAGGATCTCGCCGCCGTGTGGCCGCGCCTTCCCAACACCCACAACCGGTTCTTCTTCACCACC
TGCATCCGCCAGAAAGCCGAGACGGGCTTCAGGATGAAGCGCACCGTCGGCGCCGGCAGCTGGGTCACGAGTGACAAGAC
GGAGGTCAAGAACAGCGCCGACGAGATCATCGGATACCACGAGAAACTTCGGTACGCGTACAAGGGCCAGAGCGGCAAGT
CGGAGTGGCTCATGGACGAGTACCACTGCCGCGGATTCGACCAATACGCCCTCCTCCATGACGGCA-------AGGAGGA
GCGCGTCCTGTGCAGGCTCTACGTCTCGCCCAACGCCAAGCCGGGATCCCTCGCGCTTCAACAATCTGCTGCCGCGGATC
ACCTCATGCCTCATCACCGTAGCATCTGCCGCGGCGTCCGTGGAATTCAAGGTCAAGGACCCCCGCAG------------
CAGCAGCTGCCGCGGCGTCCACAAGAAGAGGTTGCTGTGCCTCCCGCGACCACACACACGCAGGCGCAGGCCGGGATGAG
GAAGCCAGCGCCACAAGTTGCTGACCGGCAGAGC---------------CCCATGGTTCCTGCGCCCATGTGGTCCTCTG
CCGCTGCCAGTTCGAAGCCGGGATACGTCGCGCGCCAACAGACTGCAACAGGAGATCATCTCCTTCGAGTTCAAGAACCC
GCCATCATGGCCG---CGCCGCGTCCACAAGCACGACCGCAAGCGCAGCAGGTGATGACGAAGC---CAGCGACGCCGCG
CGGCCTTGATCTTTCGTCGGGGCAGCA---GCAACGTCGCGTCACGGTTGCTGCGCCGATGACCACGCAGCT---GGCGC
CCAAGAGGCCGGCACCTCCCATTGCGGAGCCGCCGCACCCCAAGCGGATGCGTGCTGCTGCTCTCGCTCCGGCTCACACA
CGTCCCGCGGTGAAGCCGGCGTCAGCAGCACTGCCGCCTCTCGCGGTGCCACCC---AGACGACCCATAGTGTCGTGGGA
GCCGGCAAAGCGACCGTCCTGGTGTCCGCCGCAGCAGCCGAATTTCCTGTCGGCGCCGCTGCCTCAGCGCCAGGCGACCA
AGGACAAGGGAGCCGACCTTGGATTAATGGCAGAGGGCCAGAGCACGGTCCAGCAAGGAGGCCACAAGAGGACGATCCAA
CAAAAGGCCTGCAACGAGGACACGGACGAGGTGTTGCCAGAGAAAGCGCAAGATGTAGACGGCAAGATCATCCAACAAGA
TGGCGATGAGGAGGAC----------------------------------------------------------------
-----------------------------------------------------GACTTGGCGAGGTTCTTGGATGACGAG
CTTGAAATGGCGCCAGAG--------------------------------------------------------------
----------------------------------------------------------GAGACAGAAGACGTAGAAGGCA
AGGCCGTCCAACAAGATGGCAGTGAGGAGGACGAGCAGGAGGAGGGCGACGACGACTTCGCGAGGTTTTTGGATGAGGAG
CTTGAAATAGCGCCAGAGGAGACGGAAGACTTAGAAGGCGAGGCCCTCGAAAAAGATGACGA-TGAGGAGGAGGAGGACA
TGAGCACCTTGTGGTGATGGAGA------CGGTTGGAAGAGCTACCTGCGATGAAGAAGAAGAAGGCATCATCGGCATGC
GAGGTCACTACTAGTA------GAAGGCTTCACTCCTGTCCTGTGATGAGTAGCTAGGATT---TTTCCTTTAGTTGAGA
TACTCTTCACTGTAACAGTCTGAGACTGAAGCTTGTAATGAACACACTGT-----CCTGGCTCCTAGCTTGGTAGTA---
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>SNPs
-------------S-SSS----SS---S---SSS---------S----SS-S-S----------S-------SS---S--
---------S----------------S----------S-S-------------------S---------S---S-S-S--
-S-S-------------------------------S--S-----------------------------------------
---------------S----------------S----SS------S---SS-----------------S----SSSSSSS
SS--------------------S--SS----------------------S---SS--S---S----------SS------
----S--S-S-----S-----------SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS----S--------S--S-------------S----S------------------S-
----------------------------------------------------------S----SS--------S------
----SSS------------------S-S-S-S--------S--------------------S-S----------------
--------------------------------------------------------------------------------
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-----------S------S---S-----SS----------S---SSSS-----------S---------------S----
-----------------S-----------------------------------------------S-SSSSSSSSSS---
SS-----------------------------S-----------------------------------------S----SS
SSS----------------S----------------------------------SSS-SSSSS-----------------
-------------------------------------------------------------------S-------S----
-------S-----------------------SS----------------S------S-----------------------
--------------------------------------------------------------------------------
--------S--------------------------------------S--------------------------------
---------------------------------------------------S----S-----------------------
-S--------------------S------------------S--------------------------------------
-------------------------------------------------S------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-------S------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------------SSS----S--------------------------------------------S
-S-----------------------------------S------------------------------------------
-----------------------S-----------S-------------------------S---------S--------
-----------------------SS-------------------------------------------------------
--------------------------------------------------SS-----S--------S-------------
--------------------------------------------------------------------------------
----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S-------
--------------------------------------------------------------------------------
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------S------------SSS------------------------------------------------------S---
-------S---S----------------------------------------------------------------S---
---------------------S------------S---------------------------------------------
----------------S-S------S-------------------------------------------S--------S-
--------------------S-----------------SS-SSSSSSSSSSSSSS-------------------------
------------------S------------------------------------S------------------------
------------------------------S---------S------------S--------------------------
------------------S-------SS--------S--------S-------------------------SS-------
-S-S-------SSSSSSSS-SSS--SSS-SSSSSSSSSS-SSS-SS---SSSS-SSSS-S-SSSSSSSSSSSSSSSSSSS
SSSSSSS--------------------------------------------S--------------------------SS
----------------S-SSS----------S--------------S-------------------SSS-----------
--------------S-----------------------------------------------------------------
-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S---S------S-----S-------S
---------------SS------------------------------SSSSSSSSSSSSSSS-------S----------
-----S-----------S------------------------S------------SS--S------S-------S--S--
----------------S------S------S--S------S-SS----------SSSSSSSS
>forward_374
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----------------------------------CAGATAAATTGGCCGCGCAA--------------------------
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>reverse_2848
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-----------------------------------------------TAGCACCAGAGGAGACGGAA-------------
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>forward_375
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AGATAAATTGGCCGCGCAAC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>reverse_2850
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GCACCAGAGGAGACGGAAG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_2817
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------AGA
TGGCGATGAGGAGGAGT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>reverse_3832
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TACGGAACG
GAGGGAGTAGG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
