Multiple sequence alignment - TraesCS4B01G131300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G131300 chr4B 100.000 2324 0 0 1 2324 171622555 171620232 0.000000e+00 4292
1 TraesCS4B01G131300 chr4B 83.523 352 51 5 323 669 619473351 619473700 2.880000e-84 322
2 TraesCS4B01G131300 chr4D 94.676 1033 40 10 1 1029 110081488 110082509 0.000000e+00 1589
3 TraesCS4B01G131300 chr4D 88.837 851 39 18 1497 2322 110083370 110084189 0.000000e+00 994
4 TraesCS4B01G131300 chr4D 85.470 468 27 13 1058 1499 110082509 110082961 1.270000e-122 449
5 TraesCS4B01G131300 chr4D 86.932 176 22 1 337 511 485646895 485647070 1.820000e-46 196
6 TraesCS4B01G131300 chr4A 87.915 1324 76 31 1042 2324 466637233 466635953 0.000000e+00 1482
7 TraesCS4B01G131300 chr4A 89.016 1047 79 22 1 1043 466638277 466637263 0.000000e+00 1264
8 TraesCS4B01G131300 chr4A 86.111 108 14 1 1948 2055 641486878 641486772 5.250000e-22 115
9 TraesCS4B01G131300 chr5A 77.345 949 153 37 124 1036 666352669 666353591 2.670000e-139 505
10 TraesCS4B01G131300 chr6A 85.185 108 15 1 1948 2055 530086113 530086007 2.440000e-20 110
11 TraesCS4B01G131300 chr6B 83.929 112 17 1 1946 2057 17384279 17384389 3.160000e-19 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G131300 chr4B 171620232 171622555 2323 True 4292.000000 4292 100.0000 1 2324 1 chr4B.!!$R1 2323
1 TraesCS4B01G131300 chr4D 110081488 110084189 2701 False 1010.666667 1589 89.6610 1 2322 3 chr4D.!!$F2 2321
2 TraesCS4B01G131300 chr4A 466635953 466638277 2324 True 1373.000000 1482 88.4655 1 2324 2 chr4A.!!$R2 2323
3 TraesCS4B01G131300 chr5A 666352669 666353591 922 False 505.000000 505 77.3450 124 1036 1 chr5A.!!$F1 912

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
268 273 0.319040 ATCGATCGCATTGTCCCTCG 60.319 55.000 11.09 0.0 0.0 4.63 F
1182 1282 2.843545 GAGCAAGGGTGGGTTGGA 59.156 61.111 0.00 0.0 0.0 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1268 1386 0.170339 GCATTTGTGGTAACCTCGCC 59.83 55.0 0.00 0.0 0.00 5.54 R
2298 2884 1.250328 TGCAATCTCAGGTTTGCTGG 58.75 50.0 12.62 0.0 44.14 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
117 118 5.738619 TTTGAGGGAAAAATAAGGAAGGC 57.261 39.130 0.00 0.00 0.00 4.35
119 120 4.086457 TGAGGGAAAAATAAGGAAGGCAC 58.914 43.478 0.00 0.00 0.00 5.01
160 161 6.929606 ACTGTGAGATACTGTGTAAACCTTTC 59.070 38.462 0.00 0.00 39.62 2.62
241 246 2.764010 TCGCTTTCTCCCACTAAGCATA 59.236 45.455 0.00 0.00 43.34 3.14
242 247 3.196901 TCGCTTTCTCCCACTAAGCATAA 59.803 43.478 0.00 0.00 43.34 1.90
243 248 3.557595 CGCTTTCTCCCACTAAGCATAAG 59.442 47.826 0.00 0.00 43.34 1.73
244 249 3.313803 GCTTTCTCCCACTAAGCATAAGC 59.686 47.826 0.00 0.00 42.84 3.09
245 250 4.517285 CTTTCTCCCACTAAGCATAAGCA 58.483 43.478 0.00 0.00 45.49 3.91
246 251 4.778213 TTCTCCCACTAAGCATAAGCAT 57.222 40.909 0.00 0.00 45.49 3.79
251 256 6.936900 TCTCCCACTAAGCATAAGCATAAATC 59.063 38.462 0.00 0.00 45.49 2.17
268 273 0.319040 ATCGATCGCATTGTCCCTCG 60.319 55.000 11.09 0.00 0.00 4.63
742 782 5.221204 TGTCTGCAAATGATTAACAGCAACA 60.221 36.000 3.27 0.00 29.33 3.33
834 874 5.957771 ACACTCTGGGCTTATAATTCAGA 57.042 39.130 10.25 10.25 33.96 3.27
883 923 4.076394 CCTCCCGATTGTTAAAGAAACCA 58.924 43.478 0.00 0.00 37.27 3.67
889 929 7.039363 TCCCGATTGTTAAAGAAACCAATGAAT 60.039 33.333 0.00 0.00 37.27 2.57
891 931 9.072294 CCGATTGTTAAAGAAACCAATGAATAC 57.928 33.333 0.00 0.00 37.27 1.89
909 966 9.967346 AATGAATACTATGGAATATCGATACCG 57.033 33.333 7.41 0.00 37.07 4.02
911 968 6.954487 ATACTATGGAATATCGATACCGCA 57.046 37.500 7.41 4.27 35.37 5.69
976 1034 7.381323 TGCCTTAAGTAGTAGGTAAAACAGAC 58.619 38.462 0.97 0.00 33.91 3.51
997 1059 3.245264 ACATGGCCTTACCTAAAGCTTGT 60.245 43.478 3.32 0.00 40.22 3.16
1038 1100 4.889409 AGCATCGAAATGTATTTCCACCAT 59.111 37.500 10.76 0.00 42.34 3.55
1065 1158 4.432712 GGAGAGAGAGAAGCAAGAACATC 58.567 47.826 0.00 0.00 0.00 3.06
1079 1173 5.389935 GCAAGAACATCTTCAGAACTAACCG 60.390 44.000 0.00 0.00 33.78 4.44
1160 1260 3.400054 GCCGGTAGGGAAGGTGCT 61.400 66.667 1.90 0.00 38.47 4.40
1182 1282 2.843545 GAGCAAGGGTGGGTTGGA 59.156 61.111 0.00 0.00 0.00 3.53
1294 1413 2.161609 GGTTACCACAAATGCGAGAAGG 59.838 50.000 0.00 0.00 0.00 3.46
1385 1530 0.761802 CCCATCTAAGAGGGTGCTCC 59.238 60.000 0.00 0.00 40.34 4.70
1486 1631 2.711922 CCGTCTCCTCCAACTCCGG 61.712 68.421 0.00 0.00 0.00 5.14
1519 2077 0.179124 CAGACCTCAGCCTTAGCGTC 60.179 60.000 0.00 0.00 46.67 5.19
1537 2095 2.202797 CTCCTGATGGGTCGCACG 60.203 66.667 0.00 0.00 36.25 5.34
1613 2171 2.614520 GCGCCTCTTCTTATTTCCCTTC 59.385 50.000 0.00 0.00 0.00 3.46
1614 2172 3.206964 CGCCTCTTCTTATTTCCCTTCC 58.793 50.000 0.00 0.00 0.00 3.46
1615 2173 3.556999 GCCTCTTCTTATTTCCCTTCCC 58.443 50.000 0.00 0.00 0.00 3.97
1618 2176 4.230733 CCTCTTCTTATTTCCCTTCCCCTT 59.769 45.833 0.00 0.00 0.00 3.95
1619 2177 5.281769 CCTCTTCTTATTTCCCTTCCCCTTT 60.282 44.000 0.00 0.00 0.00 3.11
1620 2178 6.227624 TCTTCTTATTTCCCTTCCCCTTTT 57.772 37.500 0.00 0.00 0.00 2.27
1621 2179 6.253758 TCTTCTTATTTCCCTTCCCCTTTTC 58.746 40.000 0.00 0.00 0.00 2.29
1622 2180 5.878484 TCTTATTTCCCTTCCCCTTTTCT 57.122 39.130 0.00 0.00 0.00 2.52
1623 2181 5.827756 TCTTATTTCCCTTCCCCTTTTCTC 58.172 41.667 0.00 0.00 0.00 2.87
1624 2182 5.314841 TCTTATTTCCCTTCCCCTTTTCTCA 59.685 40.000 0.00 0.00 0.00 3.27
1625 2183 2.971901 TTCCCTTCCCCTTTTCTCAC 57.028 50.000 0.00 0.00 0.00 3.51
1626 2184 1.073098 TCCCTTCCCCTTTTCTCACC 58.927 55.000 0.00 0.00 0.00 4.02
1627 2185 0.322546 CCCTTCCCCTTTTCTCACCG 60.323 60.000 0.00 0.00 0.00 4.94
1628 2186 0.690762 CCTTCCCCTTTTCTCACCGA 59.309 55.000 0.00 0.00 0.00 4.69
1641 2199 4.944619 TCTCACCGATGATGATAAGCTT 57.055 40.909 3.48 3.48 33.22 3.74
1650 2208 7.038302 ACCGATGATGATAAGCTTTCCCTAATA 60.038 37.037 3.20 0.00 0.00 0.98
1756 2315 2.359975 CCGGCAAAGGTGAGGGAC 60.360 66.667 0.00 0.00 0.00 4.46
1766 2325 2.711978 GGTGAGGGACCACTAAATCC 57.288 55.000 0.00 0.00 45.34 3.01
1789 2348 9.736023 ATCCTTCGTTTCAATGCTATTTTATTC 57.264 29.630 0.00 0.00 0.00 1.75
1836 2395 0.605589 GAGCGTATAGATGCCTGCCT 59.394 55.000 0.00 0.00 38.47 4.75
1837 2396 0.319728 AGCGTATAGATGCCTGCCTG 59.680 55.000 0.00 0.00 38.47 4.85
1865 2428 9.886132 ACGAGTTACTCCTATGATTAAATTGTT 57.114 29.630 6.80 0.00 29.29 2.83
1892 2478 3.801698 TCTGTTCTCATGCTAAGGATGC 58.198 45.455 0.00 0.00 0.00 3.91
1935 2521 7.286546 TGTGGAATTACATATGTAAATGGTGGG 59.713 37.037 27.45 0.00 42.93 4.61
1962 2548 1.228429 TTAGGTGTGGCAACCAGGC 60.228 57.895 17.26 0.00 43.20 4.85
2057 2643 2.633509 GCTGGCCTTGCTTGAGGTG 61.634 63.158 3.32 0.00 39.11 4.00
2060 2646 0.538057 TGGCCTTGCTTGAGGTGAAG 60.538 55.000 3.32 0.00 39.11 3.02
2098 2684 0.606401 CAGGGAGGCATTGTTCGTGT 60.606 55.000 0.00 0.00 0.00 4.49
2114 2700 7.402811 TGTTCGTGTTGTAATTTCAGACTAG 57.597 36.000 0.00 0.00 0.00 2.57
2135 2721 4.826556 AGGAAATTCTCTCTTCTCAACGG 58.173 43.478 0.00 0.00 0.00 4.44
2136 2722 3.935828 GGAAATTCTCTCTTCTCAACGGG 59.064 47.826 0.00 0.00 0.00 5.28
2152 2738 1.208259 CGGGTTTCACTTTGCTTTGC 58.792 50.000 0.00 0.00 0.00 3.68
2243 2829 0.468226 TGGAACTCAGGTTGCGTTCT 59.532 50.000 10.59 0.00 44.92 3.01
2244 2830 1.149148 GGAACTCAGGTTGCGTTCTC 58.851 55.000 10.59 0.47 40.72 2.87
2298 2884 6.166982 AGGACTACTTCATGCTTTGTCTTAC 58.833 40.000 0.00 0.00 0.00 2.34
2306 2892 3.708563 TGCTTTGTCTTACCAGCAAAC 57.291 42.857 0.00 0.00 39.32 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
94 95 5.604650 TGCCTTCCTTATTTTTCCCTCAAAA 59.395 36.000 0.00 0.00 31.73 2.44
96 97 4.526650 GTGCCTTCCTTATTTTTCCCTCAA 59.473 41.667 0.00 0.00 0.00 3.02
97 98 4.086457 GTGCCTTCCTTATTTTTCCCTCA 58.914 43.478 0.00 0.00 0.00 3.86
98 99 4.344978 AGTGCCTTCCTTATTTTTCCCTC 58.655 43.478 0.00 0.00 0.00 4.30
100 101 5.715279 ACTAAGTGCCTTCCTTATTTTTCCC 59.285 40.000 0.00 0.00 0.00 3.97
101 102 6.835819 ACTAAGTGCCTTCCTTATTTTTCC 57.164 37.500 0.00 0.00 0.00 3.13
104 105 9.404848 GGTATTACTAAGTGCCTTCCTTATTTT 57.595 33.333 0.00 0.00 0.00 1.82
107 108 6.850231 AGGGTATTACTAAGTGCCTTCCTTAT 59.150 38.462 0.00 0.00 0.00 1.73
108 109 6.099269 CAGGGTATTACTAAGTGCCTTCCTTA 59.901 42.308 0.00 0.00 0.00 2.69
109 110 5.037598 AGGGTATTACTAAGTGCCTTCCTT 58.962 41.667 0.00 0.00 0.00 3.36
110 111 4.409247 CAGGGTATTACTAAGTGCCTTCCT 59.591 45.833 0.00 0.00 0.00 3.36
111 112 4.407945 TCAGGGTATTACTAAGTGCCTTCC 59.592 45.833 0.00 0.00 0.00 3.46
112 113 5.609533 TCAGGGTATTACTAAGTGCCTTC 57.390 43.478 0.00 0.00 0.00 3.46
113 114 5.487845 AGTTCAGGGTATTACTAAGTGCCTT 59.512 40.000 0.00 0.00 0.00 4.35
114 115 5.030820 AGTTCAGGGTATTACTAAGTGCCT 58.969 41.667 0.00 0.00 0.00 4.75
115 116 5.116882 CAGTTCAGGGTATTACTAAGTGCC 58.883 45.833 0.00 0.00 0.00 5.01
116 117 5.581085 CACAGTTCAGGGTATTACTAAGTGC 59.419 44.000 0.00 0.00 0.00 4.40
117 118 6.931838 TCACAGTTCAGGGTATTACTAAGTG 58.068 40.000 0.00 0.00 0.00 3.16
119 120 7.406031 TCTCACAGTTCAGGGTATTACTAAG 57.594 40.000 0.00 0.00 0.00 2.18
121 122 8.280084 AGTATCTCACAGTTCAGGGTATTACTA 58.720 37.037 0.00 0.00 0.00 1.82
122 123 7.068839 CAGTATCTCACAGTTCAGGGTATTACT 59.931 40.741 0.00 0.00 0.00 2.24
160 161 7.140048 GTCGTAAAATAGTCCTCTGTATGGAG 58.860 42.308 0.00 0.00 33.78 3.86
241 246 4.319766 GGACAATGCGATCGATTTATGCTT 60.320 41.667 21.57 0.00 0.00 3.91
242 247 3.187227 GGACAATGCGATCGATTTATGCT 59.813 43.478 21.57 1.29 0.00 3.79
243 248 3.482786 GGACAATGCGATCGATTTATGC 58.517 45.455 21.57 1.69 0.00 3.14
244 249 3.748048 AGGGACAATGCGATCGATTTATG 59.252 43.478 21.57 11.77 0.00 1.90
245 250 3.997021 GAGGGACAATGCGATCGATTTAT 59.003 43.478 21.57 0.00 0.00 1.40
246 251 3.390135 GAGGGACAATGCGATCGATTTA 58.610 45.455 21.57 1.45 0.00 1.40
251 256 0.030235 TACGAGGGACAATGCGATCG 59.970 55.000 11.69 11.69 36.32 3.69
268 273 6.791775 CGTTTGGGTTTCACGTATTTACTTAC 59.208 38.462 0.00 0.00 0.00 2.34
558 563 4.090761 TGAGCTGAAGGACAAGACAATT 57.909 40.909 0.00 0.00 0.00 2.32
742 782 4.040829 TCAGAGGTCAGATGTTTGTCATGT 59.959 41.667 0.00 0.00 36.83 3.21
834 874 3.937814 TGATTGGTAGTGAGCGTCATTT 58.062 40.909 0.00 0.00 0.00 2.32
883 923 9.967346 CGGTATCGATATTCCATAGTATTCATT 57.033 33.333 8.66 0.00 39.00 2.57
889 929 6.762702 TTGCGGTATCGATATTCCATAGTA 57.237 37.500 8.66 0.00 39.00 1.82
891 931 6.330278 TCTTTGCGGTATCGATATTCCATAG 58.670 40.000 8.66 9.86 39.00 2.23
909 966 1.611043 GATGTGCTCGCTTTCTTTGC 58.389 50.000 0.00 0.00 0.00 3.68
911 968 1.896220 TGGATGTGCTCGCTTTCTTT 58.104 45.000 0.00 0.00 0.00 2.52
976 1034 3.356290 ACAAGCTTTAGGTAAGGCCATG 58.644 45.455 5.01 3.71 38.86 3.66
1038 1100 2.055042 GCTTCTCTCTCTCCCCGCA 61.055 63.158 0.00 0.00 0.00 5.69
1065 1158 7.540299 AGACTAAATCTCGGTTAGTTCTGAAG 58.460 38.462 0.00 0.00 40.93 3.02
1110 1204 4.475444 CTACCTCCGGCTCCCCCA 62.475 72.222 0.00 0.00 0.00 4.96
1145 1239 2.125106 GCAGCACCTTCCCTACCG 60.125 66.667 0.00 0.00 0.00 4.02
1170 1270 1.285078 GCTATTTCTCCAACCCACCCT 59.715 52.381 0.00 0.00 0.00 4.34
1182 1282 2.125269 AACGGCGCGGCTATTTCT 60.125 55.556 30.60 5.18 0.00 2.52
1266 1384 0.323087 ATTTGTGGTAACCTCGCCCC 60.323 55.000 0.00 0.00 0.00 5.80
1267 1385 0.808755 CATTTGTGGTAACCTCGCCC 59.191 55.000 0.00 0.00 0.00 6.13
1268 1386 0.170339 GCATTTGTGGTAACCTCGCC 59.830 55.000 0.00 0.00 0.00 5.54
1294 1413 1.363744 CTCGTCAGAAACATGGGCTC 58.636 55.000 0.00 0.00 0.00 4.70
1395 1540 3.333898 GAAGGACGGACGGACGGAC 62.334 68.421 6.00 0.00 38.39 4.79
1396 1541 3.058160 GAAGGACGGACGGACGGA 61.058 66.667 6.00 0.00 38.39 4.69
1519 2077 2.187946 GTGCGACCCATCAGGAGG 59.812 66.667 0.00 0.00 39.89 4.30
1537 2095 2.282180 TTGCCGGCCTTCTTGACC 60.282 61.111 26.77 0.00 0.00 4.02
1595 2153 3.788708 AGGGGAAGGGAAATAAGAAGAGG 59.211 47.826 0.00 0.00 0.00 3.69
1613 2171 2.092968 TCATCATCGGTGAGAAAAGGGG 60.093 50.000 3.97 0.00 37.87 4.79
1614 2172 3.266510 TCATCATCGGTGAGAAAAGGG 57.733 47.619 3.97 0.00 37.87 3.95
1615 2173 5.049818 GCTTATCATCATCGGTGAGAAAAGG 60.050 44.000 3.97 0.00 37.87 3.11
1618 2176 5.282055 AGCTTATCATCATCGGTGAGAAA 57.718 39.130 3.97 0.00 37.87 2.52
1619 2177 4.944619 AGCTTATCATCATCGGTGAGAA 57.055 40.909 3.97 0.00 37.87 2.87
1620 2178 4.944619 AAGCTTATCATCATCGGTGAGA 57.055 40.909 3.97 2.32 37.87 3.27
1621 2179 4.450419 GGAAAGCTTATCATCATCGGTGAG 59.550 45.833 3.97 0.00 37.87 3.51
1622 2180 4.380531 GGAAAGCTTATCATCATCGGTGA 58.619 43.478 0.00 0.00 39.04 4.02
1623 2181 3.499918 GGGAAAGCTTATCATCATCGGTG 59.500 47.826 0.00 0.00 0.00 4.94
1624 2182 3.392616 AGGGAAAGCTTATCATCATCGGT 59.607 43.478 0.00 0.00 0.00 4.69
1625 2183 4.013267 AGGGAAAGCTTATCATCATCGG 57.987 45.455 0.00 0.00 0.00 4.18
1626 2184 8.954950 ATATTAGGGAAAGCTTATCATCATCG 57.045 34.615 0.00 0.00 0.00 3.84
1628 2186 9.388506 CGAATATTAGGGAAAGCTTATCATCAT 57.611 33.333 0.00 0.00 0.00 2.45
1641 2199 6.376018 CCCAAGAAAACACGAATATTAGGGAA 59.624 38.462 4.69 0.00 31.77 3.97
1650 2208 0.596082 CCGCCCAAGAAAACACGAAT 59.404 50.000 0.00 0.00 0.00 3.34
1756 2315 5.095490 GCATTGAAACGAAGGATTTAGTGG 58.905 41.667 0.00 0.00 0.00 4.00
1794 2353 7.709182 GCTCCAATCAATCAATCAATCAATCAA 59.291 33.333 0.00 0.00 0.00 2.57
1795 2354 7.207383 GCTCCAATCAATCAATCAATCAATCA 58.793 34.615 0.00 0.00 0.00 2.57
1796 2355 6.362551 CGCTCCAATCAATCAATCAATCAATC 59.637 38.462 0.00 0.00 0.00 2.67
1797 2356 6.183360 ACGCTCCAATCAATCAATCAATCAAT 60.183 34.615 0.00 0.00 0.00 2.57
1836 2395 7.649533 TTTAATCATAGGAGTAACTCGTCCA 57.350 36.000 0.00 0.00 33.70 4.02
1837 2396 8.979574 CAATTTAATCATAGGAGTAACTCGTCC 58.020 37.037 0.00 0.00 33.70 4.79
1865 2428 6.533730 TCCTTAGCATGAGAACAGAAAGAAA 58.466 36.000 0.00 0.00 0.00 2.52
1868 2431 5.220815 GCATCCTTAGCATGAGAACAGAAAG 60.221 44.000 0.00 0.00 0.00 2.62
1892 2478 3.814842 TCCACATACACAGTTTTCAGCAG 59.185 43.478 0.00 0.00 0.00 4.24
1935 2521 3.512033 TGCCACACCTAACAACAAAAC 57.488 42.857 0.00 0.00 0.00 2.43
1962 2548 0.387202 CCTCCTCCAGTGCATCTACG 59.613 60.000 0.00 0.00 0.00 3.51
2057 2643 5.967088 TGCGGATAAGGAGAATATAGCTTC 58.033 41.667 0.00 0.00 0.00 3.86
2060 2646 4.442192 CCCTGCGGATAAGGAGAATATAGC 60.442 50.000 0.00 0.00 36.91 2.97
2114 2700 3.935828 CCCGTTGAGAAGAGAGAATTTCC 59.064 47.826 0.00 0.00 0.00 3.13
2135 2721 1.594397 GCTGCAAAGCAAAGTGAAACC 59.406 47.619 0.00 0.00 38.41 3.27
2136 2722 2.543641 AGCTGCAAAGCAAAGTGAAAC 58.456 42.857 1.02 0.00 38.41 2.78
2152 2738 3.358707 TCTTGCACAACATCAAAGCTG 57.641 42.857 0.00 0.00 0.00 4.24
2298 2884 1.250328 TGCAATCTCAGGTTTGCTGG 58.750 50.000 12.62 0.00 44.14 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.