Multiple sequence alignment - TraesCS4B01G116300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G116300 chr4B 100.000 2513 0 0 1 2513 134046010 134048522 0.000000e+00 4641.0
1 TraesCS4B01G116300 chr4B 93.056 216 11 4 1 214 423604907 423605120 1.880000e-81 313.0
2 TraesCS4B01G116300 chr4B 81.818 88 13 3 1941 2027 72927531 72927616 1.250000e-08 71.3
3 TraesCS4B01G116300 chr4D 93.219 1637 86 15 699 2314 94696622 94698254 0.000000e+00 2385.0
4 TraesCS4B01G116300 chr4D 86.508 504 48 13 217 706 94696097 94696594 1.020000e-148 536.0
5 TraesCS4B01G116300 chr4D 93.458 214 13 1 1 214 417890617 417890405 1.450000e-82 316.0
6 TraesCS4B01G116300 chr4D 91.943 211 11 2 2309 2513 94698335 94698545 8.790000e-75 291.0
7 TraesCS4B01G116300 chr4A 92.033 1456 66 22 347 1756 485709691 485708240 0.000000e+00 2001.0
8 TraesCS4B01G116300 chr4A 88.648 784 71 13 1743 2513 485691474 485690696 0.000000e+00 939.0
9 TraesCS4B01G116300 chr6B 93.519 216 10 4 1 214 135225950 135225737 4.030000e-83 318.0
10 TraesCS4B01G116300 chr6B 96.970 33 1 0 1184 1216 572090998 572091030 3.490000e-04 56.5
11 TraesCS4B01G116300 chr5B 93.488 215 12 2 1 214 289237010 289237223 4.030000e-83 318.0
12 TraesCS4B01G116300 chr3B 93.519 216 10 4 1 214 350332939 350332726 4.030000e-83 318.0
13 TraesCS4B01G116300 chr2B 93.458 214 13 1 1 214 492911939 492911727 1.450000e-82 316.0
14 TraesCS4B01G116300 chr2B 100.000 33 0 0 1976 2008 190669928 190669960 7.510000e-06 62.1
15 TraesCS4B01G116300 chrUn 93.023 215 13 2 1 214 5569443 5569230 1.880000e-81 313.0
16 TraesCS4B01G116300 chr1B 93.023 215 13 2 1 214 215742425 215742638 1.880000e-81 313.0
17 TraesCS4B01G116300 chr1B 93.023 215 13 2 1 214 231735053 231734840 1.880000e-81 313.0
18 TraesCS4B01G116300 chr2D 81.373 102 16 3 1940 2039 12915791 12915891 2.070000e-11 80.5
19 TraesCS4B01G116300 chr6D 96.970 33 1 0 1184 1216 382551005 382551037 3.490000e-04 56.5
20 TraesCS4B01G116300 chr6A 100.000 28 0 0 1189 1216 524332106 524332133 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G116300 chr4B 134046010 134048522 2512 False 4641.000000 4641 100.000000 1 2513 1 chr4B.!!$F2 2512
1 TraesCS4B01G116300 chr4D 94696097 94698545 2448 False 1070.666667 2385 90.556667 217 2513 3 chr4D.!!$F1 2296
2 TraesCS4B01G116300 chr4A 485708240 485709691 1451 True 2001.000000 2001 92.033000 347 1756 1 chr4A.!!$R2 1409
3 TraesCS4B01G116300 chr4A 485690696 485691474 778 True 939.000000 939 88.648000 1743 2513 1 chr4A.!!$R1 770

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
620 638 0.10339 AAGAAACCAAAAACCCCGCG 59.897 50.0 0.0 0.0 0.0 6.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2178 2252 0.175531 GAGAGCTCCTCACTCCTTGC 59.824 60.0 10.93 0.0 41.58 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.817418 TTTATTATACCCAACTTGGATGCTC 57.183 36.000 9.61 0.00 40.96 4.26
26 27 4.853468 TTATACCCAACTTGGATGCTCA 57.147 40.909 9.61 0.00 40.96 4.26
27 28 3.959495 ATACCCAACTTGGATGCTCAT 57.041 42.857 9.61 0.00 40.96 2.90
28 29 2.134789 ACCCAACTTGGATGCTCATC 57.865 50.000 9.61 1.35 40.96 2.92
29 30 1.355381 ACCCAACTTGGATGCTCATCA 59.645 47.619 9.61 0.00 40.96 3.07
30 31 2.024655 ACCCAACTTGGATGCTCATCAT 60.025 45.455 9.61 0.00 40.96 2.45
31 32 3.028850 CCCAACTTGGATGCTCATCATT 58.971 45.455 9.61 0.00 40.96 2.57
32 33 3.067742 CCCAACTTGGATGCTCATCATTC 59.932 47.826 9.61 0.00 40.96 2.67
33 34 3.952323 CCAACTTGGATGCTCATCATTCT 59.048 43.478 11.49 0.00 40.96 2.40
34 35 5.128205 CCAACTTGGATGCTCATCATTCTA 58.872 41.667 11.49 0.00 40.96 2.10
35 36 5.238868 CCAACTTGGATGCTCATCATTCTAG 59.761 44.000 11.49 4.14 40.96 2.43
36 37 4.970711 ACTTGGATGCTCATCATTCTAGG 58.029 43.478 11.49 0.00 37.70 3.02
37 38 4.657504 ACTTGGATGCTCATCATTCTAGGA 59.342 41.667 11.49 0.00 37.70 2.94
38 39 5.310068 ACTTGGATGCTCATCATTCTAGGAT 59.690 40.000 11.49 0.00 37.70 3.24
39 40 5.417754 TGGATGCTCATCATTCTAGGATC 57.582 43.478 11.49 0.00 39.54 3.36
40 41 4.842380 TGGATGCTCATCATTCTAGGATCA 59.158 41.667 11.49 0.00 39.17 2.92
41 42 5.308759 TGGATGCTCATCATTCTAGGATCAA 59.691 40.000 11.49 0.00 39.17 2.57
42 43 6.012771 TGGATGCTCATCATTCTAGGATCAAT 60.013 38.462 11.49 0.00 39.17 2.57
43 44 6.885376 GGATGCTCATCATTCTAGGATCAATT 59.115 38.462 11.49 0.00 39.17 2.32
44 45 7.393796 GGATGCTCATCATTCTAGGATCAATTT 59.606 37.037 11.49 0.00 39.17 1.82
45 46 8.707796 ATGCTCATCATTCTAGGATCAATTTT 57.292 30.769 0.00 0.00 29.16 1.82
46 47 9.803507 ATGCTCATCATTCTAGGATCAATTTTA 57.196 29.630 0.00 0.00 29.16 1.52
47 48 9.803507 TGCTCATCATTCTAGGATCAATTTTAT 57.196 29.630 0.00 0.00 0.00 1.40
67 68 9.927668 ATTTTATAACCATAGCAAATACCATGC 57.072 29.630 0.00 0.00 44.15 4.06
78 79 6.875926 GCAAATACCATGCTGTTCTAAAAG 57.124 37.500 0.00 0.00 40.64 2.27
79 80 6.620678 GCAAATACCATGCTGTTCTAAAAGA 58.379 36.000 0.00 0.00 40.64 2.52
80 81 6.528072 GCAAATACCATGCTGTTCTAAAAGAC 59.472 38.462 0.00 0.00 40.64 3.01
81 82 6.759497 AATACCATGCTGTTCTAAAAGACC 57.241 37.500 0.00 0.00 0.00 3.85
82 83 4.098914 ACCATGCTGTTCTAAAAGACCA 57.901 40.909 0.00 0.00 0.00 4.02
83 84 4.666512 ACCATGCTGTTCTAAAAGACCAT 58.333 39.130 0.00 0.00 0.00 3.55
84 85 5.079643 ACCATGCTGTTCTAAAAGACCATT 58.920 37.500 0.00 0.00 0.00 3.16
85 86 6.245408 ACCATGCTGTTCTAAAAGACCATTA 58.755 36.000 0.00 0.00 0.00 1.90
86 87 6.719370 ACCATGCTGTTCTAAAAGACCATTAA 59.281 34.615 0.00 0.00 0.00 1.40
87 88 7.397192 ACCATGCTGTTCTAAAAGACCATTAAT 59.603 33.333 0.00 0.00 0.00 1.40
88 89 8.902806 CCATGCTGTTCTAAAAGACCATTAATA 58.097 33.333 0.00 0.00 0.00 0.98
119 120 7.934855 AAGTGAAGCATTAGAGATCAACAAT 57.065 32.000 0.00 0.00 0.00 2.71
120 121 7.934855 AGTGAAGCATTAGAGATCAACAATT 57.065 32.000 0.00 0.00 0.00 2.32
121 122 8.345724 AGTGAAGCATTAGAGATCAACAATTT 57.654 30.769 0.00 0.00 0.00 1.82
122 123 8.457261 AGTGAAGCATTAGAGATCAACAATTTC 58.543 33.333 0.00 0.00 0.00 2.17
123 124 8.457261 GTGAAGCATTAGAGATCAACAATTTCT 58.543 33.333 0.00 0.00 33.59 2.52
124 125 9.671279 TGAAGCATTAGAGATCAACAATTTCTA 57.329 29.630 0.00 0.00 31.58 2.10
125 126 9.928236 GAAGCATTAGAGATCAACAATTTCTAC 57.072 33.333 0.00 0.00 32.37 2.59
126 127 9.453572 AAGCATTAGAGATCAACAATTTCTACA 57.546 29.630 0.00 0.00 32.37 2.74
127 128 9.453572 AGCATTAGAGATCAACAATTTCTACAA 57.546 29.630 0.00 0.00 32.37 2.41
137 138 9.829507 ATCAACAATTTCTACAAAATCAAACCA 57.170 25.926 0.00 0.00 0.00 3.67
138 139 9.092876 TCAACAATTTCTACAAAATCAAACCAC 57.907 29.630 0.00 0.00 0.00 4.16
139 140 8.334632 CAACAATTTCTACAAAATCAAACCACC 58.665 33.333 0.00 0.00 0.00 4.61
140 141 6.699642 ACAATTTCTACAAAATCAAACCACCG 59.300 34.615 0.00 0.00 0.00 4.94
141 142 5.838531 TTTCTACAAAATCAAACCACCGT 57.161 34.783 0.00 0.00 0.00 4.83
142 143 5.427036 TTCTACAAAATCAAACCACCGTC 57.573 39.130 0.00 0.00 0.00 4.79
143 144 2.766970 ACAAAATCAAACCACCGTCG 57.233 45.000 0.00 0.00 0.00 5.12
144 145 2.018515 ACAAAATCAAACCACCGTCGT 58.981 42.857 0.00 0.00 0.00 4.34
145 146 2.223386 ACAAAATCAAACCACCGTCGTG 60.223 45.455 0.00 0.00 39.91 4.35
146 147 1.670791 AAATCAAACCACCGTCGTGT 58.329 45.000 0.00 0.00 38.41 4.49
147 148 1.670791 AATCAAACCACCGTCGTGTT 58.329 45.000 0.00 0.00 38.41 3.32
148 149 1.223187 ATCAAACCACCGTCGTGTTC 58.777 50.000 0.00 0.00 38.41 3.18
149 150 0.176219 TCAAACCACCGTCGTGTTCT 59.824 50.000 0.00 0.00 38.41 3.01
150 151 1.408340 TCAAACCACCGTCGTGTTCTA 59.592 47.619 0.00 0.00 38.41 2.10
151 152 2.159128 TCAAACCACCGTCGTGTTCTAA 60.159 45.455 0.00 0.00 38.41 2.10
152 153 2.600470 AACCACCGTCGTGTTCTAAA 57.400 45.000 0.00 0.00 38.41 1.85
153 154 2.144482 ACCACCGTCGTGTTCTAAAG 57.856 50.000 0.00 0.00 38.41 1.85
154 155 1.682854 ACCACCGTCGTGTTCTAAAGA 59.317 47.619 0.00 0.00 38.41 2.52
155 156 2.288030 ACCACCGTCGTGTTCTAAAGAG 60.288 50.000 0.00 0.00 38.41 2.85
156 157 2.288030 CCACCGTCGTGTTCTAAAGAGT 60.288 50.000 0.00 0.00 38.41 3.24
157 158 3.058016 CCACCGTCGTGTTCTAAAGAGTA 60.058 47.826 0.00 0.00 38.41 2.59
158 159 4.380233 CCACCGTCGTGTTCTAAAGAGTAT 60.380 45.833 0.00 0.00 38.41 2.12
159 160 5.163723 CCACCGTCGTGTTCTAAAGAGTATA 60.164 44.000 0.00 0.00 38.41 1.47
160 161 6.317088 CACCGTCGTGTTCTAAAGAGTATAA 58.683 40.000 0.00 0.00 35.10 0.98
161 162 6.468319 CACCGTCGTGTTCTAAAGAGTATAAG 59.532 42.308 0.00 0.00 35.10 1.73
162 163 6.150140 ACCGTCGTGTTCTAAAGAGTATAAGT 59.850 38.462 0.00 0.00 0.00 2.24
163 164 6.468319 CCGTCGTGTTCTAAAGAGTATAAGTG 59.532 42.308 0.00 0.00 0.00 3.16
164 165 7.239271 CGTCGTGTTCTAAAGAGTATAAGTGA 58.761 38.462 0.00 0.00 0.00 3.41
165 166 7.747799 CGTCGTGTTCTAAAGAGTATAAGTGAA 59.252 37.037 0.00 0.00 0.00 3.18
166 167 9.063739 GTCGTGTTCTAAAGAGTATAAGTGAAG 57.936 37.037 0.00 0.00 0.00 3.02
167 168 7.754027 TCGTGTTCTAAAGAGTATAAGTGAAGC 59.246 37.037 0.00 0.00 0.00 3.86
168 169 7.541091 CGTGTTCTAAAGAGTATAAGTGAAGCA 59.459 37.037 0.00 0.00 0.00 3.91
169 170 8.648968 GTGTTCTAAAGAGTATAAGTGAAGCAC 58.351 37.037 0.00 0.00 34.10 4.40
173 174 9.682465 TCTAAAGAGTATAAGTGAAGCACTAGA 57.318 33.333 0.00 0.00 44.62 2.43
174 175 9.944663 CTAAAGAGTATAAGTGAAGCACTAGAG 57.055 37.037 0.00 0.00 44.62 2.43
175 176 6.385649 AGAGTATAAGTGAAGCACTAGAGC 57.614 41.667 3.68 3.68 44.62 4.09
176 177 5.888724 AGAGTATAAGTGAAGCACTAGAGCA 59.111 40.000 14.80 0.00 44.62 4.26
177 178 6.378564 AGAGTATAAGTGAAGCACTAGAGCAA 59.621 38.462 14.80 0.00 44.62 3.91
178 179 6.936279 AGTATAAGTGAAGCACTAGAGCAAA 58.064 36.000 14.80 0.00 44.62 3.68
179 180 7.386851 AGTATAAGTGAAGCACTAGAGCAAAA 58.613 34.615 14.80 0.00 44.62 2.44
180 181 4.820284 AAGTGAAGCACTAGAGCAAAAC 57.180 40.909 14.80 8.62 44.62 2.43
181 182 4.078639 AGTGAAGCACTAGAGCAAAACT 57.921 40.909 14.80 10.59 43.46 2.66
182 183 5.215252 AGTGAAGCACTAGAGCAAAACTA 57.785 39.130 14.80 0.00 43.46 2.24
183 184 5.799213 AGTGAAGCACTAGAGCAAAACTAT 58.201 37.500 14.80 0.00 43.46 2.12
184 185 5.872070 AGTGAAGCACTAGAGCAAAACTATC 59.128 40.000 14.80 2.15 43.46 2.08
185 186 5.872070 GTGAAGCACTAGAGCAAAACTATCT 59.128 40.000 14.80 0.00 36.85 1.98
186 187 6.370166 GTGAAGCACTAGAGCAAAACTATCTT 59.630 38.462 14.80 0.00 36.85 2.40
187 188 6.369890 TGAAGCACTAGAGCAAAACTATCTTG 59.630 38.462 14.80 0.00 36.85 3.02
208 209 7.978982 TCTTGCTCAAAAGATATAAGTGAAGC 58.021 34.615 0.00 0.00 31.19 3.86
209 210 7.607607 TCTTGCTCAAAAGATATAAGTGAAGCA 59.392 33.333 0.00 0.00 31.19 3.91
210 211 7.870509 TGCTCAAAAGATATAAGTGAAGCAT 57.129 32.000 0.00 0.00 0.00 3.79
211 212 7.923888 TGCTCAAAAGATATAAGTGAAGCATC 58.076 34.615 0.00 0.00 0.00 3.91
212 213 7.553760 TGCTCAAAAGATATAAGTGAAGCATCA 59.446 33.333 0.00 0.00 0.00 3.07
213 214 8.566260 GCTCAAAAGATATAAGTGAAGCATCAT 58.434 33.333 0.00 0.00 38.01 2.45
214 215 9.880064 CTCAAAAGATATAAGTGAAGCATCATG 57.120 33.333 0.00 0.00 38.01 3.07
215 216 9.399797 TCAAAAGATATAAGTGAAGCATCATGT 57.600 29.630 0.00 0.00 38.01 3.21
246 247 3.625649 TCAATTCGATGTGATGGGTGA 57.374 42.857 0.00 0.00 0.00 4.02
247 248 3.949132 TCAATTCGATGTGATGGGTGAA 58.051 40.909 0.00 0.00 0.00 3.18
250 251 2.223537 TCGATGTGATGGGTGAATCG 57.776 50.000 0.00 0.00 41.04 3.34
254 255 1.275666 TGTGATGGGTGAATCGGACT 58.724 50.000 0.00 0.00 0.00 3.85
259 260 1.141234 GGGTGAATCGGACTCGTCC 59.859 63.158 6.01 6.01 46.18 4.79
268 269 2.438795 GACTCGTCCGAGCCTCCT 60.439 66.667 16.10 0.00 45.54 3.69
269 270 2.438795 ACTCGTCCGAGCCTCCTC 60.439 66.667 16.10 0.00 45.54 3.71
275 276 1.884497 CGTCCGAGCCTCCTCATATCT 60.884 57.143 0.00 0.00 38.00 1.98
276 277 1.543802 GTCCGAGCCTCCTCATATCTG 59.456 57.143 0.00 0.00 38.00 2.90
310 311 3.387050 GTCTAAATATGAGGGGTGTCGGT 59.613 47.826 0.00 0.00 0.00 4.69
331 333 4.132122 TCAGCCCTGACATATAGGATCA 57.868 45.455 0.00 0.00 37.52 2.92
347 349 0.106719 ATCAATACAAGGGGTGCGGG 60.107 55.000 0.00 0.00 0.00 6.13
348 350 2.044352 AATACAAGGGGTGCGGGC 60.044 61.111 0.00 0.00 0.00 6.13
366 368 1.401905 GGCGAGCCGAATTTTTGAGAT 59.598 47.619 0.00 0.00 0.00 2.75
373 376 4.215399 AGCCGAATTTTTGAGATCGAACAA 59.785 37.500 0.00 0.00 37.48 2.83
428 431 7.362056 CCATACGTGTTCCATTTTCTTTGATCT 60.362 37.037 0.00 0.00 0.00 2.75
468 480 7.135467 CGTGGATCGTGATCTGGAATATATAG 58.865 42.308 9.54 0.00 37.92 1.31
620 638 0.103390 AAGAAACCAAAAACCCCGCG 59.897 50.000 0.00 0.00 0.00 6.46
638 656 1.578583 CGGACAGGTTTCGTGAACTT 58.421 50.000 4.85 0.00 38.35 2.66
655 673 3.932545 ACTTCGCCAAACATTGCATTA 57.067 38.095 0.00 0.00 0.00 1.90
692 710 0.938637 CGATCACATGCGCTCCTCTC 60.939 60.000 9.73 0.00 0.00 3.20
766 821 4.512944 CGTCAATAGTCAAAGGATGGATGG 59.487 45.833 0.00 0.00 0.00 3.51
800 855 2.218759 GTCATCACGTGCGATGGATAAC 59.781 50.000 11.67 1.20 42.58 1.89
862 917 4.014847 TCAAACAAGCAGTTCAAGTTCG 57.985 40.909 0.00 0.00 40.26 3.95
863 918 3.438781 TCAAACAAGCAGTTCAAGTTCGT 59.561 39.130 0.00 0.00 40.26 3.85
869 924 0.776451 CAGTTCAAGTTCGTCGTCCG 59.224 55.000 0.00 0.00 38.13 4.79
946 1001 3.207265 TCAGTCTTACCAAGCAGCAAA 57.793 42.857 0.00 0.00 0.00 3.68
951 1006 3.057946 GTCTTACCAAGCAGCAAAAGAGG 60.058 47.826 0.00 0.00 0.00 3.69
953 1008 1.291272 CCAAGCAGCAAAAGAGGGC 59.709 57.895 0.00 0.00 0.00 5.19
980 1035 2.891580 AGCTGGTCTCTCTAACGACAAA 59.108 45.455 0.00 0.00 31.88 2.83
989 1044 1.871039 TCTAACGACAAAGCTTGTGCC 59.129 47.619 0.00 0.00 45.52 5.01
1042 1097 4.451150 CAGCGGGCAGTAAGGCGA 62.451 66.667 0.00 0.00 45.36 5.54
1135 1190 0.598158 GACAACGTACCTTGTCGGCA 60.598 55.000 17.99 0.00 40.44 5.69
1259 1316 1.136305 GTGCGAGTATAGCCTTGGACA 59.864 52.381 0.00 0.00 37.20 4.02
1514 1571 0.248539 GCCGTCACCGTCTACTGATC 60.249 60.000 0.00 0.00 0.00 2.92
1564 1621 1.557443 CGAGTGGCGTTGACCTTGAC 61.557 60.000 0.00 0.00 34.64 3.18
1568 1625 2.315386 GGCGTTGACCTTGACGTCC 61.315 63.158 14.12 0.00 41.10 4.79
1569 1626 1.300697 GCGTTGACCTTGACGTCCT 60.301 57.895 14.12 0.00 41.10 3.85
1570 1627 0.038892 GCGTTGACCTTGACGTCCTA 60.039 55.000 14.12 0.00 41.10 2.94
1571 1628 1.694639 CGTTGACCTTGACGTCCTAC 58.305 55.000 14.12 3.34 34.75 3.18
1723 1790 4.860072 AGCTTGTCGTCTTTCAAATTTCC 58.140 39.130 0.00 0.00 0.00 3.13
1773 1840 2.289820 CTCTTTGGTGCATCCATGATCG 59.710 50.000 8.55 0.00 46.60 3.69
1839 1906 5.722021 AGTATTTTGGTCGCCATTTCTTT 57.278 34.783 0.00 0.00 31.53 2.52
1878 1945 8.810652 TTTAGGCATTGTTTGTATGAAGAAAC 57.189 30.769 0.00 0.00 38.89 2.78
1895 1962 6.700960 TGAAGAAACGACGACCAAAATACTTA 59.299 34.615 0.00 0.00 0.00 2.24
1929 1996 7.881232 AGTTTTTATGTACCTTCTCCGATTTGA 59.119 33.333 0.00 0.00 0.00 2.69
2176 2250 8.770010 ATAAAATATTATTTGGGGTTCGACCA 57.230 30.769 2.48 0.00 41.02 4.02
2212 2286 4.440663 GGAGCTCTCAATATTTTTGGTGCC 60.441 45.833 14.64 0.00 0.00 5.01
2216 2290 2.495669 CTCAATATTTTTGGTGCCCCGT 59.504 45.455 0.00 0.00 0.00 5.28
2241 2315 7.220108 GTGCGTCCCTTTGAAATGTAATATTTC 59.780 37.037 0.00 5.63 38.23 2.17
2242 2316 7.094162 TGCGTCCCTTTGAAATGTAATATTTCA 60.094 33.333 10.14 10.14 43.71 2.69
2253 2327 9.788960 GAAATGTAATATTTCAACCAGTCCTTC 57.211 33.333 0.00 0.00 37.80 3.46
2288 2362 8.522830 CCCACAATATTGAACAAGATTAGTTGT 58.477 33.333 22.16 1.44 42.62 3.32
2340 2500 6.567769 ACTTGTTACAATGAAAACAAAGCG 57.432 33.333 15.32 9.42 43.06 4.68
2369 2529 6.867816 TCAATGCTTATGCGAGAAAACAAAAT 59.132 30.769 0.00 0.00 43.34 1.82
2384 2544 7.545615 AGAAAACAAAATTGGTCAAGTTGAGTC 59.454 33.333 5.62 2.55 0.00 3.36
2417 2579 7.171653 TGAAACAAAGTATGATGTGACCCATA 58.828 34.615 0.00 0.00 32.56 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.836685 TGAGCATCCAAGTTGGGTATAATAAAA 59.163 33.333 21.85 0.00 38.32 1.52
1 2 7.350382 TGAGCATCCAAGTTGGGTATAATAAA 58.650 34.615 21.85 0.00 38.32 1.40
2 3 6.905736 TGAGCATCCAAGTTGGGTATAATAA 58.094 36.000 21.85 0.00 38.32 1.40
3 4 6.508030 TGAGCATCCAAGTTGGGTATAATA 57.492 37.500 21.85 0.54 38.32 0.98
4 5 5.387113 TGAGCATCCAAGTTGGGTATAAT 57.613 39.130 21.85 4.64 38.32 1.28
5 6 4.853468 TGAGCATCCAAGTTGGGTATAA 57.147 40.909 21.85 2.12 38.32 0.98
6 7 4.411869 TGATGAGCATCCAAGTTGGGTATA 59.588 41.667 21.85 2.53 38.32 1.47
7 8 3.202818 TGATGAGCATCCAAGTTGGGTAT 59.797 43.478 21.85 6.92 38.32 2.73
8 9 2.575735 TGATGAGCATCCAAGTTGGGTA 59.424 45.455 21.85 3.73 38.32 3.69
9 10 1.355381 TGATGAGCATCCAAGTTGGGT 59.645 47.619 21.85 12.65 38.32 4.51
10 11 2.133281 TGATGAGCATCCAAGTTGGG 57.867 50.000 21.85 7.90 38.32 4.12
11 12 3.952323 AGAATGATGAGCATCCAAGTTGG 59.048 43.478 16.36 16.36 35.78 3.77
12 13 5.238868 CCTAGAATGATGAGCATCCAAGTTG 59.761 44.000 7.92 0.00 35.78 3.16
13 14 5.131642 TCCTAGAATGATGAGCATCCAAGTT 59.868 40.000 7.92 0.00 35.78 2.66
14 15 4.657504 TCCTAGAATGATGAGCATCCAAGT 59.342 41.667 7.92 0.00 35.78 3.16
15 16 5.224821 TCCTAGAATGATGAGCATCCAAG 57.775 43.478 7.92 0.00 35.78 3.61
16 17 5.308759 TGATCCTAGAATGATGAGCATCCAA 59.691 40.000 7.92 0.00 35.78 3.53
17 18 4.842380 TGATCCTAGAATGATGAGCATCCA 59.158 41.667 7.92 0.00 35.78 3.41
18 19 5.417754 TGATCCTAGAATGATGAGCATCC 57.582 43.478 7.92 0.00 35.78 3.51
19 20 7.925043 AATTGATCCTAGAATGATGAGCATC 57.075 36.000 3.55 3.55 35.78 3.91
20 21 8.707796 AAAATTGATCCTAGAATGATGAGCAT 57.292 30.769 0.00 0.00 39.43 3.79
21 22 9.803507 ATAAAATTGATCCTAGAATGATGAGCA 57.196 29.630 0.00 0.00 0.00 4.26
41 42 9.927668 GCATGGTATTTGCTATGGTTATAAAAT 57.072 29.630 0.00 0.00 37.14 1.82
55 56 6.528072 GTCTTTTAGAACAGCATGGTATTTGC 59.472 38.462 0.00 0.00 33.00 3.68
56 57 7.029563 GGTCTTTTAGAACAGCATGGTATTTG 58.970 38.462 0.00 0.00 33.00 2.32
57 58 6.719370 TGGTCTTTTAGAACAGCATGGTATTT 59.281 34.615 0.00 0.00 33.00 1.40
58 59 6.245408 TGGTCTTTTAGAACAGCATGGTATT 58.755 36.000 0.00 0.00 33.00 1.89
59 60 5.815581 TGGTCTTTTAGAACAGCATGGTAT 58.184 37.500 0.00 0.00 33.00 2.73
60 61 5.235850 TGGTCTTTTAGAACAGCATGGTA 57.764 39.130 0.00 0.00 33.00 3.25
61 62 4.098914 TGGTCTTTTAGAACAGCATGGT 57.901 40.909 0.00 0.00 42.46 3.55
62 63 5.649782 AATGGTCTTTTAGAACAGCATGG 57.350 39.130 0.61 0.00 46.38 3.66
93 94 9.624373 ATTGTTGATCTCTAATGCTTCACTTAT 57.376 29.630 0.00 0.00 0.00 1.73
94 95 9.453572 AATTGTTGATCTCTAATGCTTCACTTA 57.546 29.630 0.00 0.00 0.00 2.24
95 96 7.934855 ATTGTTGATCTCTAATGCTTCACTT 57.065 32.000 0.00 0.00 0.00 3.16
96 97 7.934855 AATTGTTGATCTCTAATGCTTCACT 57.065 32.000 0.00 0.00 0.00 3.41
97 98 8.457261 AGAAATTGTTGATCTCTAATGCTTCAC 58.543 33.333 0.00 0.00 0.00 3.18
98 99 8.571461 AGAAATTGTTGATCTCTAATGCTTCA 57.429 30.769 0.00 0.00 0.00 3.02
99 100 9.928236 GTAGAAATTGTTGATCTCTAATGCTTC 57.072 33.333 0.00 0.00 0.00 3.86
100 101 9.453572 TGTAGAAATTGTTGATCTCTAATGCTT 57.546 29.630 0.00 0.00 0.00 3.91
101 102 9.453572 TTGTAGAAATTGTTGATCTCTAATGCT 57.546 29.630 0.00 0.00 0.00 3.79
111 112 9.829507 TGGTTTGATTTTGTAGAAATTGTTGAT 57.170 25.926 0.00 0.00 0.00 2.57
112 113 9.092876 GTGGTTTGATTTTGTAGAAATTGTTGA 57.907 29.630 0.00 0.00 0.00 3.18
113 114 8.334632 GGTGGTTTGATTTTGTAGAAATTGTTG 58.665 33.333 0.00 0.00 0.00 3.33
114 115 7.223777 CGGTGGTTTGATTTTGTAGAAATTGTT 59.776 33.333 0.00 0.00 0.00 2.83
115 116 6.699642 CGGTGGTTTGATTTTGTAGAAATTGT 59.300 34.615 0.00 0.00 0.00 2.71
116 117 6.699642 ACGGTGGTTTGATTTTGTAGAAATTG 59.300 34.615 0.00 0.00 0.00 2.32
117 118 6.811954 ACGGTGGTTTGATTTTGTAGAAATT 58.188 32.000 0.00 0.00 0.00 1.82
118 119 6.399639 ACGGTGGTTTGATTTTGTAGAAAT 57.600 33.333 0.00 0.00 0.00 2.17
119 120 5.504337 CGACGGTGGTTTGATTTTGTAGAAA 60.504 40.000 0.00 0.00 0.00 2.52
120 121 4.024725 CGACGGTGGTTTGATTTTGTAGAA 60.025 41.667 0.00 0.00 0.00 2.10
121 122 3.495377 CGACGGTGGTTTGATTTTGTAGA 59.505 43.478 0.00 0.00 0.00 2.59
122 123 3.249080 ACGACGGTGGTTTGATTTTGTAG 59.751 43.478 0.00 0.00 0.00 2.74
123 124 3.002451 CACGACGGTGGTTTGATTTTGTA 59.998 43.478 0.00 0.00 40.58 2.41
124 125 2.018515 ACGACGGTGGTTTGATTTTGT 58.981 42.857 0.00 0.00 0.00 2.83
125 126 2.380660 CACGACGGTGGTTTGATTTTG 58.619 47.619 0.00 0.00 40.58 2.44
126 127 2.424246 AACACGACGGTGGTTTGATTTT 59.576 40.909 0.00 0.00 42.89 1.82
127 128 2.018515 AACACGACGGTGGTTTGATTT 58.981 42.857 0.00 0.00 42.89 2.17
128 129 1.600485 GAACACGACGGTGGTTTGATT 59.400 47.619 0.00 0.00 46.26 2.57
129 130 1.202604 AGAACACGACGGTGGTTTGAT 60.203 47.619 0.00 0.00 46.26 2.57
130 131 0.176219 AGAACACGACGGTGGTTTGA 59.824 50.000 0.00 0.00 46.26 2.69
131 132 1.855513 TAGAACACGACGGTGGTTTG 58.144 50.000 0.00 0.00 46.26 2.93
132 133 2.600470 TTAGAACACGACGGTGGTTT 57.400 45.000 0.00 0.00 46.26 3.27
133 134 2.101249 TCTTTAGAACACGACGGTGGTT 59.899 45.455 0.00 0.28 46.26 3.67
137 138 6.150140 ACTTATACTCTTTAGAACACGACGGT 59.850 38.462 0.00 0.00 0.00 4.83
138 139 6.468319 CACTTATACTCTTTAGAACACGACGG 59.532 42.308 0.00 0.00 0.00 4.79
139 140 7.239271 TCACTTATACTCTTTAGAACACGACG 58.761 38.462 0.00 0.00 0.00 5.12
140 141 8.961294 TTCACTTATACTCTTTAGAACACGAC 57.039 34.615 0.00 0.00 0.00 4.34
141 142 7.754027 GCTTCACTTATACTCTTTAGAACACGA 59.246 37.037 0.00 0.00 0.00 4.35
142 143 7.541091 TGCTTCACTTATACTCTTTAGAACACG 59.459 37.037 0.00 0.00 0.00 4.49
143 144 8.648968 GTGCTTCACTTATACTCTTTAGAACAC 58.351 37.037 0.00 0.00 0.00 3.32
144 145 8.585881 AGTGCTTCACTTATACTCTTTAGAACA 58.414 33.333 0.00 0.00 42.59 3.18
145 146 8.989653 AGTGCTTCACTTATACTCTTTAGAAC 57.010 34.615 0.00 0.00 42.59 3.01
147 148 9.682465 TCTAGTGCTTCACTTATACTCTTTAGA 57.318 33.333 4.70 0.00 42.59 2.10
148 149 9.944663 CTCTAGTGCTTCACTTATACTCTTTAG 57.055 37.037 4.70 0.00 42.59 1.85
149 150 8.407064 GCTCTAGTGCTTCACTTATACTCTTTA 58.593 37.037 9.52 0.00 42.59 1.85
150 151 7.093727 TGCTCTAGTGCTTCACTTATACTCTTT 60.094 37.037 17.08 0.00 42.59 2.52
151 152 6.378564 TGCTCTAGTGCTTCACTTATACTCTT 59.621 38.462 17.08 0.00 42.59 2.85
152 153 5.888724 TGCTCTAGTGCTTCACTTATACTCT 59.111 40.000 17.08 0.00 42.59 3.24
153 154 6.137794 TGCTCTAGTGCTTCACTTATACTC 57.862 41.667 17.08 0.00 42.59 2.59
154 155 6.531503 TTGCTCTAGTGCTTCACTTATACT 57.468 37.500 17.08 0.00 42.59 2.12
155 156 7.332182 AGTTTTGCTCTAGTGCTTCACTTATAC 59.668 37.037 17.08 3.97 42.59 1.47
156 157 7.386851 AGTTTTGCTCTAGTGCTTCACTTATA 58.613 34.615 17.08 0.00 42.59 0.98
157 158 6.234177 AGTTTTGCTCTAGTGCTTCACTTAT 58.766 36.000 17.08 0.00 42.59 1.73
158 159 5.611374 AGTTTTGCTCTAGTGCTTCACTTA 58.389 37.500 17.08 0.00 42.59 2.24
159 160 4.455606 AGTTTTGCTCTAGTGCTTCACTT 58.544 39.130 17.08 0.00 42.59 3.16
161 162 5.872070 AGATAGTTTTGCTCTAGTGCTTCAC 59.128 40.000 17.08 10.45 34.10 3.18
162 163 6.042638 AGATAGTTTTGCTCTAGTGCTTCA 57.957 37.500 17.08 0.00 0.00 3.02
163 164 6.674278 GCAAGATAGTTTTGCTCTAGTGCTTC 60.674 42.308 17.08 5.86 45.64 3.86
164 165 5.123027 GCAAGATAGTTTTGCTCTAGTGCTT 59.877 40.000 17.08 0.00 45.64 3.91
165 166 4.633565 GCAAGATAGTTTTGCTCTAGTGCT 59.366 41.667 17.08 0.01 45.64 4.40
166 167 4.902964 GCAAGATAGTTTTGCTCTAGTGC 58.097 43.478 9.86 9.86 45.64 4.40
182 183 8.619546 GCTTCACTTATATCTTTTGAGCAAGAT 58.380 33.333 2.91 2.91 44.28 2.40
183 184 7.607607 TGCTTCACTTATATCTTTTGAGCAAGA 59.392 33.333 0.00 0.00 37.20 3.02
184 185 7.755591 TGCTTCACTTATATCTTTTGAGCAAG 58.244 34.615 0.00 0.00 0.00 4.01
185 186 7.686438 TGCTTCACTTATATCTTTTGAGCAA 57.314 32.000 0.00 0.00 0.00 3.91
186 187 7.553760 TGATGCTTCACTTATATCTTTTGAGCA 59.446 33.333 0.00 0.00 0.00 4.26
187 188 7.923888 TGATGCTTCACTTATATCTTTTGAGC 58.076 34.615 0.00 0.00 0.00 4.26
188 189 9.880064 CATGATGCTTCACTTATATCTTTTGAG 57.120 33.333 4.14 0.00 33.85 3.02
189 190 9.399797 ACATGATGCTTCACTTATATCTTTTGA 57.600 29.630 4.14 0.00 33.85 2.69
190 191 9.447040 CACATGATGCTTCACTTATATCTTTTG 57.553 33.333 4.14 0.00 33.85 2.44
191 192 9.182214 ACACATGATGCTTCACTTATATCTTTT 57.818 29.630 4.14 0.00 33.85 2.27
192 193 8.743085 ACACATGATGCTTCACTTATATCTTT 57.257 30.769 4.14 0.00 33.85 2.52
193 194 8.209584 AGACACATGATGCTTCACTTATATCTT 58.790 33.333 4.14 0.00 33.85 2.40
194 195 7.733969 AGACACATGATGCTTCACTTATATCT 58.266 34.615 4.14 1.59 33.85 1.98
195 196 7.654923 TGAGACACATGATGCTTCACTTATATC 59.345 37.037 4.14 1.42 33.85 1.63
196 197 7.440556 GTGAGACACATGATGCTTCACTTATAT 59.559 37.037 4.14 0.00 39.83 0.86
197 198 6.758416 GTGAGACACATGATGCTTCACTTATA 59.242 38.462 4.14 0.00 39.83 0.98
198 199 5.583854 GTGAGACACATGATGCTTCACTTAT 59.416 40.000 4.14 0.00 39.83 1.73
199 200 4.931601 GTGAGACACATGATGCTTCACTTA 59.068 41.667 4.14 0.00 39.83 2.24
200 201 3.750130 GTGAGACACATGATGCTTCACTT 59.250 43.478 4.14 0.00 39.83 3.16
201 202 3.244318 TGTGAGACACATGATGCTTCACT 60.244 43.478 20.22 0.00 41.84 3.41
202 203 3.069289 TGTGAGACACATGATGCTTCAC 58.931 45.455 4.14 11.43 39.62 3.18
203 204 3.405823 TGTGAGACACATGATGCTTCA 57.594 42.857 4.57 4.57 39.62 3.02
215 216 4.448732 CACATCGAATTGAAGTGTGAGACA 59.551 41.667 7.16 0.00 40.53 3.41
229 230 3.133691 CGATTCACCCATCACATCGAAT 58.866 45.455 0.00 0.00 39.26 3.34
235 236 1.207089 GAGTCCGATTCACCCATCACA 59.793 52.381 0.00 0.00 0.00 3.58
239 240 0.460311 GACGAGTCCGATTCACCCAT 59.540 55.000 0.00 0.00 39.50 4.00
254 255 0.110678 ATATGAGGAGGCTCGGACGA 59.889 55.000 8.69 0.00 0.00 4.20
259 260 3.742433 AAACAGATATGAGGAGGCTCG 57.258 47.619 8.69 0.00 0.00 5.03
260 261 6.412362 TCTAAAACAGATATGAGGAGGCTC 57.588 41.667 5.78 5.78 0.00 4.70
290 291 3.386726 TGACCGACACCCCTCATATTTAG 59.613 47.826 0.00 0.00 0.00 1.85
298 299 4.083862 GGCTGACCGACACCCCTC 62.084 72.222 0.00 0.00 0.00 4.30
301 302 4.394712 CAGGGCTGACCGACACCC 62.395 72.222 0.00 0.00 46.96 4.61
302 303 3.311110 TCAGGGCTGACCGACACC 61.311 66.667 0.00 0.00 46.96 4.16
310 311 4.132122 TGATCCTATATGTCAGGGCTGA 57.868 45.455 0.00 0.00 37.24 4.26
321 323 5.338381 CGCACCCCTTGTATTGATCCTATAT 60.338 44.000 0.00 0.00 0.00 0.86
329 331 1.301623 CCCGCACCCCTTGTATTGA 59.698 57.895 0.00 0.00 0.00 2.57
331 333 2.044352 GCCCGCACCCCTTGTATT 60.044 61.111 0.00 0.00 0.00 1.89
347 349 2.709636 GATCTCAAAAATTCGGCTCGC 58.290 47.619 0.00 0.00 0.00 5.03
348 350 2.603110 TCGATCTCAAAAATTCGGCTCG 59.397 45.455 0.00 0.00 32.67 5.03
356 358 4.154195 CGGTCCTTGTTCGATCTCAAAAAT 59.846 41.667 0.00 0.00 0.00 1.82
366 368 0.518636 CGTAGACGGTCCTTGTTCGA 59.481 55.000 4.14 0.00 35.37 3.71
416 419 3.671008 TCGTCGGGAGATCAAAGAAAA 57.329 42.857 0.00 0.00 43.27 2.29
468 480 2.029844 GTCGAGCTGCCACCAAGTC 61.030 63.158 0.00 0.00 0.00 3.01
620 638 1.525619 CGAAGTTCACGAAACCTGTCC 59.474 52.381 3.32 0.00 38.76 4.02
638 656 2.276472 GCTAATGCAATGTTTGGCGA 57.724 45.000 0.00 0.00 39.41 5.54
667 685 1.595109 GCGCATGTGATCGATGGGA 60.595 57.895 19.75 0.00 36.18 4.37
692 710 8.703604 TTCTGACGATTAAGTTTGGATAAGAG 57.296 34.615 0.00 0.00 0.00 2.85
766 821 1.207593 GATGACACGTTGTGCAGCC 59.792 57.895 0.00 0.00 36.98 4.85
800 855 2.521958 ATTGGGGAGGAGTGAACGCG 62.522 60.000 3.53 3.53 0.00 6.01
925 980 2.928801 TGCTGCTTGGTAAGACTGAA 57.071 45.000 0.00 0.00 0.00 3.02
946 1001 2.581354 CAGCTACTGCGCCCTCTT 59.419 61.111 4.18 0.00 45.42 2.85
951 1006 2.202810 GAGACCAGCTACTGCGCC 60.203 66.667 4.18 0.00 45.42 6.53
953 1008 1.669604 TAGAGAGACCAGCTACTGCG 58.330 55.000 0.00 0.00 45.42 5.18
1119 1174 1.216941 CGTTGCCGACAAGGTACGTT 61.217 55.000 0.00 0.00 41.72 3.99
1259 1316 3.495100 GCATGGTCAGATCGGGATAAGTT 60.495 47.826 0.00 0.00 0.00 2.66
1514 1571 2.237751 GGTGGGCGACGATCGAATG 61.238 63.158 24.34 11.68 43.74 2.67
1539 1596 1.737735 TCAACGCCACTCGATGCAG 60.738 57.895 0.00 0.00 40.26 4.41
1576 1633 0.237235 ACAAATTACACACGCCAGCG 59.763 50.000 11.05 11.05 46.03 5.18
1654 1721 3.922240 GCGTATTACGAGAGAAAACACCA 59.078 43.478 19.86 0.00 46.05 4.17
1656 1723 3.001365 CGGCGTATTACGAGAGAAAACAC 60.001 47.826 19.86 0.00 46.05 3.32
1723 1790 9.436957 TCCTTTTAAGTGAGCTTAGTATCTTTG 57.563 33.333 0.00 0.00 38.31 2.77
1773 1840 1.516161 GAGAAAACCGGGTGTGGTAC 58.484 55.000 6.32 0.00 42.89 3.34
1839 1906 8.588290 ACAATGCCTAAATTGGAGTTTGTATA 57.412 30.769 2.34 0.00 41.06 1.47
1878 1945 8.624701 TTTAGATCTAAGTATTTTGGTCGTCG 57.375 34.615 14.63 0.00 0.00 5.12
1908 1975 6.110707 GGTTCAAATCGGAGAAGGTACATAA 58.889 40.000 0.00 0.00 43.58 1.90
1929 1996 7.990314 AGGCACATAAAAACTTGTATTTTGGTT 59.010 29.630 0.00 0.00 32.12 3.67
2047 2121 6.812160 GCGAGTACTCATCTTTTAGGAGAAAA 59.188 38.462 22.37 0.00 38.30 2.29
2050 2124 4.948004 TGCGAGTACTCATCTTTTAGGAGA 59.052 41.667 22.37 0.00 38.30 3.71
2081 2155 7.398904 GGAAGCCTCTCTAACTATCCTATGAAT 59.601 40.741 0.00 0.00 0.00 2.57
2082 2156 6.722129 GGAAGCCTCTCTAACTATCCTATGAA 59.278 42.308 0.00 0.00 0.00 2.57
2084 2158 6.013379 TGGAAGCCTCTCTAACTATCCTATG 58.987 44.000 0.00 0.00 0.00 2.23
2094 2168 2.327325 AGGTGTGGAAGCCTCTCTAA 57.673 50.000 0.00 0.00 0.00 2.10
2134 2208 0.851469 TATAGGACCGCTCTCCCACT 59.149 55.000 0.00 0.00 0.00 4.00
2176 2250 0.612744 GAGCTCCTCACTCCTTGCTT 59.387 55.000 0.87 0.00 0.00 3.91
2178 2252 0.175531 GAGAGCTCCTCACTCCTTGC 59.824 60.000 10.93 0.00 41.58 4.01
2212 2286 1.241315 ATTTCAAAGGGACGCACGGG 61.241 55.000 0.00 0.00 0.00 5.28
2216 2290 6.767524 AATATTACATTTCAAAGGGACGCA 57.232 33.333 0.00 0.00 0.00 5.24
2241 2315 3.507622 GGAGAAAATGGAAGGACTGGTTG 59.492 47.826 0.00 0.00 0.00 3.77
2242 2316 3.500471 GGGAGAAAATGGAAGGACTGGTT 60.500 47.826 0.00 0.00 0.00 3.67
2253 2327 6.934056 TGTTCAATATTGTGGGAGAAAATGG 58.066 36.000 14.97 0.00 0.00 3.16
2326 2486 3.435105 TGAGCACGCTTTGTTTTCATT 57.565 38.095 0.00 0.00 0.00 2.57
2369 2529 5.367945 AAGTTAGGACTCAACTTGACCAA 57.632 39.130 0.00 0.00 42.98 3.67
2384 2544 9.398170 CACATCATACTTTGTTTCAAAGTTAGG 57.602 33.333 25.50 17.49 40.58 2.69
2417 2579 5.308237 AGGTGGAACTCTCAAGTCATAAAGT 59.692 40.000 0.00 0.00 36.74 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.