Multiple sequence alignment - TraesCS4B01G100900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G100900 chr4B 100.000 2279 0 0 1 2279 106786564 106784286 0.000000e+00 4209.0
1 TraesCS4B01G100900 chr4D 94.816 1061 36 11 635 1689 74348887 74347840 0.000000e+00 1637.0
2 TraesCS4B01G100900 chr4D 93.771 594 30 7 1690 2279 74347216 74346626 0.000000e+00 885.0
3 TraesCS4B01G100900 chr4D 89.961 259 25 1 270 528 331709798 331710055 1.300000e-87 333.0
4 TraesCS4B01G100900 chr4A 90.752 1103 53 21 619 1685 513349056 513350145 0.000000e+00 1426.0
5 TraesCS4B01G100900 chr4A 92.437 595 35 8 1690 2279 513350588 513351177 0.000000e+00 841.0
6 TraesCS4B01G100900 chr4A 90.119 253 25 0 276 528 674523637 674523385 1.690000e-86 329.0
7 TraesCS4B01G100900 chr4A 88.462 260 23 4 272 531 698165989 698165737 7.910000e-80 307.0
8 TraesCS4B01G100900 chr1B 92.490 253 17 2 273 524 589055912 589055661 5.980000e-96 361.0
9 TraesCS4B01G100900 chr1B 91.797 256 20 1 273 528 553450027 553450281 2.780000e-94 355.0
10 TraesCS4B01G100900 chr1B 90.496 242 22 1 277 518 184773015 184773255 3.650000e-83 318.0
11 TraesCS4B01G100900 chr3B 91.373 255 18 3 270 523 493121882 493121631 1.680000e-91 346.0
12 TraesCS4B01G100900 chr6B 91.176 238 20 1 281 517 439062091 439062328 2.820000e-84 322.0
13 TraesCS4B01G100900 chr7B 91.139 237 17 3 281 516 119234334 119234567 3.650000e-83 318.0
14 TraesCS4B01G100900 chr7B 97.222 36 1 0 1 36 684865197 684865232 6.800000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G100900 chr4B 106784286 106786564 2278 True 4209.0 4209 100.0000 1 2279 1 chr4B.!!$R1 2278
1 TraesCS4B01G100900 chr4D 74346626 74348887 2261 True 1261.0 1637 94.2935 635 2279 2 chr4D.!!$R1 1644
2 TraesCS4B01G100900 chr4A 513349056 513351177 2121 False 1133.5 1426 91.5945 619 2279 2 chr4A.!!$F1 1660

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
48 49 0.036952 AGATATTGATGCGGCCCGAG 60.037 55.0 7.68 0.0 0.0 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1531 1564 1.444836 TTTATTTGCGGGAGTCGGTG 58.555 50.0 0.0 0.0 39.69 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.980844 CGACAATTTGACACAGCATGC 59.019 47.619 10.51 10.51 42.53 4.06
21 22 1.980844 GACAATTTGACACAGCATGCG 59.019 47.619 13.01 9.99 42.53 4.73
22 23 1.337703 ACAATTTGACACAGCATGCGT 59.662 42.857 13.01 10.68 42.53 5.24
29 30 3.469899 GACACAGCATGCGTCAAATAA 57.530 42.857 13.01 0.00 46.83 1.40
30 31 3.419915 GACACAGCATGCGTCAAATAAG 58.580 45.455 13.01 2.71 46.83 1.73
31 32 3.073678 ACACAGCATGCGTCAAATAAGA 58.926 40.909 13.01 0.00 42.53 2.10
32 33 3.691118 ACACAGCATGCGTCAAATAAGAT 59.309 39.130 13.01 0.00 42.53 2.40
33 34 4.875536 ACACAGCATGCGTCAAATAAGATA 59.124 37.500 13.01 0.00 42.53 1.98
34 35 5.528690 ACACAGCATGCGTCAAATAAGATAT 59.471 36.000 13.01 0.00 42.53 1.63
35 36 6.038603 ACACAGCATGCGTCAAATAAGATATT 59.961 34.615 13.01 0.00 42.53 1.28
36 37 6.358822 CACAGCATGCGTCAAATAAGATATTG 59.641 38.462 13.01 1.33 42.53 1.90
37 38 6.260714 ACAGCATGCGTCAAATAAGATATTGA 59.739 34.615 13.01 0.00 42.53 2.57
38 39 7.040892 ACAGCATGCGTCAAATAAGATATTGAT 60.041 33.333 13.01 0.00 42.53 2.57
39 40 7.270579 CAGCATGCGTCAAATAAGATATTGATG 59.729 37.037 13.01 3.90 42.66 3.07
43 44 5.082059 CGTCAAATAAGATATTGATGCGGC 58.918 41.667 0.00 0.00 37.82 6.53
44 45 5.393962 GTCAAATAAGATATTGATGCGGCC 58.606 41.667 0.00 0.00 37.82 6.13
45 46 4.458989 TCAAATAAGATATTGATGCGGCCC 59.541 41.667 0.00 0.00 30.94 5.80
46 47 2.093306 TAAGATATTGATGCGGCCCG 57.907 50.000 0.00 0.00 0.00 6.13
47 48 0.396435 AAGATATTGATGCGGCCCGA 59.604 50.000 7.68 0.00 0.00 5.14
48 49 0.036952 AGATATTGATGCGGCCCGAG 60.037 55.000 7.68 0.00 0.00 4.63
49 50 1.639298 GATATTGATGCGGCCCGAGC 61.639 60.000 7.68 0.00 38.76 5.03
60 61 4.712425 CCCGAGCGAACGAACGGT 62.712 66.667 21.64 9.80 46.35 4.83
61 62 3.467119 CCGAGCGAACGAACGGTG 61.467 66.667 17.93 7.61 43.81 4.94
62 63 4.117372 CGAGCGAACGAACGGTGC 62.117 66.667 13.83 0.00 43.81 5.01
63 64 2.733593 GAGCGAACGAACGGTGCT 60.734 61.111 13.83 8.35 43.81 4.40
64 65 1.443194 GAGCGAACGAACGGTGCTA 60.443 57.895 13.83 0.00 43.81 3.49
65 66 1.005294 GAGCGAACGAACGGTGCTAA 61.005 55.000 13.83 0.00 43.81 3.09
66 67 1.007336 AGCGAACGAACGGTGCTAAG 61.007 55.000 9.34 0.00 42.25 2.18
67 68 1.005294 GCGAACGAACGGTGCTAAGA 61.005 55.000 0.00 0.00 0.00 2.10
68 69 1.411394 CGAACGAACGGTGCTAAGAA 58.589 50.000 0.00 0.00 0.00 2.52
69 70 1.788308 CGAACGAACGGTGCTAAGAAA 59.212 47.619 0.00 0.00 0.00 2.52
70 71 2.409371 CGAACGAACGGTGCTAAGAAAC 60.409 50.000 0.00 0.00 0.00 2.78
71 72 1.505425 ACGAACGGTGCTAAGAAACC 58.495 50.000 0.00 0.00 0.00 3.27
72 73 1.069668 ACGAACGGTGCTAAGAAACCT 59.930 47.619 0.00 0.00 34.06 3.50
73 74 1.459592 CGAACGGTGCTAAGAAACCTG 59.540 52.381 0.00 0.00 34.06 4.00
74 75 2.762745 GAACGGTGCTAAGAAACCTGA 58.237 47.619 0.00 0.00 34.06 3.86
75 76 3.335579 GAACGGTGCTAAGAAACCTGAT 58.664 45.455 0.00 0.00 34.06 2.90
76 77 3.418684 ACGGTGCTAAGAAACCTGATT 57.581 42.857 0.00 0.00 34.06 2.57
77 78 3.751518 ACGGTGCTAAGAAACCTGATTT 58.248 40.909 0.00 0.00 34.06 2.17
78 79 3.751698 ACGGTGCTAAGAAACCTGATTTC 59.248 43.478 0.00 0.00 46.21 2.17
85 86 1.923356 GAAACCTGATTTCTGGGCCA 58.077 50.000 5.85 5.85 43.06 5.36
86 87 1.821136 GAAACCTGATTTCTGGGCCAG 59.179 52.381 28.01 28.01 43.06 4.85
87 88 0.779997 AACCTGATTTCTGGGCCAGT 59.220 50.000 31.60 14.41 39.04 4.00
88 89 0.329596 ACCTGATTTCTGGGCCAGTC 59.670 55.000 31.60 22.32 39.04 3.51
89 90 0.394899 CCTGATTTCTGGGCCAGTCC 60.395 60.000 31.60 18.81 32.61 3.85
90 91 0.329261 CTGATTTCTGGGCCAGTCCA 59.671 55.000 31.60 21.79 36.21 4.02
91 92 0.776810 TGATTTCTGGGCCAGTCCAA 59.223 50.000 31.60 22.20 36.21 3.53
92 93 1.146774 TGATTTCTGGGCCAGTCCAAA 59.853 47.619 31.60 24.16 36.21 3.28
93 94 2.225343 TGATTTCTGGGCCAGTCCAAAT 60.225 45.455 31.60 27.28 36.21 2.32
94 95 1.631405 TTTCTGGGCCAGTCCAAATG 58.369 50.000 31.60 6.10 36.21 2.32
95 96 0.899717 TTCTGGGCCAGTCCAAATGC 60.900 55.000 31.60 0.00 36.21 3.56
96 97 1.607178 CTGGGCCAGTCCAAATGCA 60.607 57.895 25.74 0.00 36.21 3.96
97 98 1.880819 CTGGGCCAGTCCAAATGCAC 61.881 60.000 25.74 0.00 36.21 4.57
98 99 2.568090 GGCCAGTCCAAATGCACG 59.432 61.111 0.00 0.00 34.01 5.34
99 100 2.568090 GCCAGTCCAAATGCACGG 59.432 61.111 0.00 0.00 0.00 4.94
100 101 1.971167 GCCAGTCCAAATGCACGGA 60.971 57.895 0.00 0.00 0.00 4.69
103 104 2.175811 GTCCAAATGCACGGACGC 59.824 61.111 14.16 0.00 42.19 5.19
104 105 3.053291 TCCAAATGCACGGACGCC 61.053 61.111 0.00 0.00 0.00 5.68
105 106 3.361158 CCAAATGCACGGACGCCA 61.361 61.111 0.00 0.00 0.00 5.69
106 107 2.176546 CAAATGCACGGACGCCAG 59.823 61.111 0.00 0.00 0.00 4.85
107 108 3.737172 AAATGCACGGACGCCAGC 61.737 61.111 0.00 0.00 0.00 4.85
112 113 4.728102 CACGGACGCCAGCGGTAA 62.728 66.667 17.33 0.00 44.69 2.85
113 114 4.430765 ACGGACGCCAGCGGTAAG 62.431 66.667 17.33 7.19 44.69 2.34
114 115 4.124351 CGGACGCCAGCGGTAAGA 62.124 66.667 17.33 0.00 44.69 2.10
115 116 2.508663 GGACGCCAGCGGTAAGAC 60.509 66.667 17.33 0.75 44.69 3.01
116 117 2.508663 GACGCCAGCGGTAAGACC 60.509 66.667 17.33 0.00 44.69 3.85
117 118 2.995574 ACGCCAGCGGTAAGACCT 60.996 61.111 17.33 0.00 44.69 3.85
118 119 1.660560 GACGCCAGCGGTAAGACCTA 61.661 60.000 17.33 0.00 44.69 3.08
119 120 1.041447 ACGCCAGCGGTAAGACCTAT 61.041 55.000 17.33 0.00 44.69 2.57
120 121 0.104304 CGCCAGCGGTAAGACCTATT 59.896 55.000 3.61 0.00 35.66 1.73
121 122 1.338973 CGCCAGCGGTAAGACCTATTA 59.661 52.381 3.61 0.00 35.66 0.98
122 123 2.607282 CGCCAGCGGTAAGACCTATTAG 60.607 54.545 3.61 0.00 35.66 1.73
123 124 2.626743 GCCAGCGGTAAGACCTATTAGA 59.373 50.000 0.00 0.00 35.66 2.10
124 125 3.069158 GCCAGCGGTAAGACCTATTAGAA 59.931 47.826 0.00 0.00 35.66 2.10
125 126 4.442472 GCCAGCGGTAAGACCTATTAGAAA 60.442 45.833 0.00 0.00 35.66 2.52
126 127 5.742255 GCCAGCGGTAAGACCTATTAGAAAT 60.742 44.000 0.00 0.00 35.66 2.17
127 128 5.927115 CCAGCGGTAAGACCTATTAGAAATC 59.073 44.000 0.00 0.00 35.66 2.17
128 129 5.629849 CAGCGGTAAGACCTATTAGAAATCG 59.370 44.000 0.00 0.00 35.66 3.34
129 130 4.922103 GCGGTAAGACCTATTAGAAATCGG 59.078 45.833 0.00 0.00 35.66 4.18
130 131 4.922103 CGGTAAGACCTATTAGAAATCGGC 59.078 45.833 0.00 0.00 35.66 5.54
131 132 5.508489 CGGTAAGACCTATTAGAAATCGGCA 60.508 44.000 0.00 0.00 35.66 5.69
132 133 5.695363 GGTAAGACCTATTAGAAATCGGCAC 59.305 44.000 0.00 0.00 34.73 5.01
133 134 7.495050 GGTAAGACCTATTAGAAATCGGCACG 61.495 46.154 0.00 0.00 45.27 5.34
150 151 4.940463 GGCACGAACAGTATATAGTTCCA 58.060 43.478 12.08 0.00 40.69 3.53
151 152 5.353938 GGCACGAACAGTATATAGTTCCAA 58.646 41.667 12.08 0.00 40.69 3.53
152 153 5.233689 GGCACGAACAGTATATAGTTCCAAC 59.766 44.000 12.08 4.67 40.69 3.77
153 154 5.808540 GCACGAACAGTATATAGTTCCAACA 59.191 40.000 12.08 0.00 40.69 3.33
154 155 6.019801 GCACGAACAGTATATAGTTCCAACAG 60.020 42.308 12.08 3.97 40.69 3.16
155 156 7.033791 CACGAACAGTATATAGTTCCAACAGT 58.966 38.462 12.08 4.41 40.69 3.55
156 157 7.009265 CACGAACAGTATATAGTTCCAACAGTG 59.991 40.741 12.08 10.37 40.69 3.66
157 158 6.019801 CGAACAGTATATAGTTCCAACAGTGC 60.020 42.308 12.08 0.00 40.69 4.40
158 159 5.671493 ACAGTATATAGTTCCAACAGTGCC 58.329 41.667 0.00 0.00 0.00 5.01
159 160 5.057149 CAGTATATAGTTCCAACAGTGCCC 58.943 45.833 0.00 0.00 0.00 5.36
160 161 3.577805 ATATAGTTCCAACAGTGCCCC 57.422 47.619 0.00 0.00 0.00 5.80
161 162 1.372501 ATAGTTCCAACAGTGCCCCT 58.627 50.000 0.00 0.00 0.00 4.79
163 164 1.150536 GTTCCAACAGTGCCCCTGA 59.849 57.895 7.43 0.00 44.49 3.86
164 165 0.251341 GTTCCAACAGTGCCCCTGAT 60.251 55.000 7.43 0.00 44.49 2.90
165 166 1.004277 GTTCCAACAGTGCCCCTGATA 59.996 52.381 7.43 0.00 44.49 2.15
166 167 1.595311 TCCAACAGTGCCCCTGATAT 58.405 50.000 7.43 0.00 44.49 1.63
167 168 2.770447 TCCAACAGTGCCCCTGATATA 58.230 47.619 7.43 0.00 44.49 0.86
168 169 2.705658 TCCAACAGTGCCCCTGATATAG 59.294 50.000 7.43 0.00 44.49 1.31
169 170 2.224621 CCAACAGTGCCCCTGATATAGG 60.225 54.545 7.43 0.00 44.49 2.57
181 182 5.153950 CCTGATATAGGGGTTAGTTGAGC 57.846 47.826 0.00 0.00 43.33 4.26
182 183 4.020128 CCTGATATAGGGGTTAGTTGAGCC 60.020 50.000 0.00 0.00 43.33 4.70
185 186 3.395630 GGGGTTAGTTGAGCCCGA 58.604 61.111 0.00 0.00 46.50 5.14
186 187 1.681076 GGGGTTAGTTGAGCCCGAA 59.319 57.895 0.00 0.00 46.50 4.30
187 188 0.037160 GGGGTTAGTTGAGCCCGAAA 59.963 55.000 0.00 0.00 46.50 3.46
188 189 1.162698 GGGTTAGTTGAGCCCGAAAC 58.837 55.000 0.00 0.00 32.16 2.78
189 190 1.543871 GGGTTAGTTGAGCCCGAAACA 60.544 52.381 0.00 0.00 32.16 2.83
190 191 2.223745 GGTTAGTTGAGCCCGAAACAA 58.776 47.619 0.00 0.00 0.00 2.83
191 192 2.225727 GGTTAGTTGAGCCCGAAACAAG 59.774 50.000 0.00 0.00 0.00 3.16
192 193 2.876550 GTTAGTTGAGCCCGAAACAAGT 59.123 45.455 0.00 0.00 0.00 3.16
193 194 2.052782 AGTTGAGCCCGAAACAAGTT 57.947 45.000 0.00 0.00 0.00 2.66
194 195 1.947456 AGTTGAGCCCGAAACAAGTTC 59.053 47.619 0.00 0.00 0.00 3.01
195 196 1.673920 GTTGAGCCCGAAACAAGTTCA 59.326 47.619 0.00 0.00 35.83 3.18
196 197 2.045561 TGAGCCCGAAACAAGTTCAA 57.954 45.000 0.00 0.00 35.83 2.69
197 198 2.370349 TGAGCCCGAAACAAGTTCAAA 58.630 42.857 0.00 0.00 35.83 2.69
198 199 2.955660 TGAGCCCGAAACAAGTTCAAAT 59.044 40.909 0.00 0.00 35.83 2.32
199 200 3.243367 TGAGCCCGAAACAAGTTCAAATG 60.243 43.478 0.00 0.00 35.83 2.32
200 201 2.035832 AGCCCGAAACAAGTTCAAATGG 59.964 45.455 0.00 0.00 35.83 3.16
201 202 2.035321 GCCCGAAACAAGTTCAAATGGA 59.965 45.455 0.00 0.00 35.83 3.41
202 203 3.638484 CCCGAAACAAGTTCAAATGGAC 58.362 45.455 0.00 0.00 35.83 4.02
203 204 3.067461 CCCGAAACAAGTTCAAATGGACA 59.933 43.478 0.00 0.00 35.83 4.02
204 205 4.440802 CCCGAAACAAGTTCAAATGGACAA 60.441 41.667 0.00 0.00 35.83 3.18
205 206 4.739716 CCGAAACAAGTTCAAATGGACAAG 59.260 41.667 0.00 0.00 35.83 3.16
206 207 5.339990 CGAAACAAGTTCAAATGGACAAGT 58.660 37.500 0.00 0.00 35.83 3.16
207 208 5.229887 CGAAACAAGTTCAAATGGACAAGTG 59.770 40.000 0.00 0.00 35.83 3.16
208 209 5.913137 AACAAGTTCAAATGGACAAGTGA 57.087 34.783 0.00 0.00 0.00 3.41
209 210 5.505173 ACAAGTTCAAATGGACAAGTGAG 57.495 39.130 0.00 0.00 0.00 3.51
210 211 4.949856 ACAAGTTCAAATGGACAAGTGAGT 59.050 37.500 0.00 0.00 0.00 3.41
211 212 6.119536 ACAAGTTCAAATGGACAAGTGAGTA 58.880 36.000 0.00 0.00 0.00 2.59
212 213 6.601613 ACAAGTTCAAATGGACAAGTGAGTAA 59.398 34.615 0.00 0.00 0.00 2.24
213 214 7.122055 ACAAGTTCAAATGGACAAGTGAGTAAA 59.878 33.333 0.00 0.00 0.00 2.01
214 215 7.639113 AGTTCAAATGGACAAGTGAGTAAAA 57.361 32.000 0.00 0.00 0.00 1.52
215 216 7.480810 AGTTCAAATGGACAAGTGAGTAAAAC 58.519 34.615 0.00 0.00 0.00 2.43
216 217 6.385649 TCAAATGGACAAGTGAGTAAAACC 57.614 37.500 0.00 0.00 0.00 3.27
217 218 5.888724 TCAAATGGACAAGTGAGTAAAACCA 59.111 36.000 0.00 0.00 0.00 3.67
218 219 6.378564 TCAAATGGACAAGTGAGTAAAACCAA 59.621 34.615 0.00 0.00 0.00 3.67
219 220 5.767816 ATGGACAAGTGAGTAAAACCAAC 57.232 39.130 0.00 0.00 0.00 3.77
220 221 4.590918 TGGACAAGTGAGTAAAACCAACA 58.409 39.130 0.00 0.00 0.00 3.33
221 222 4.638421 TGGACAAGTGAGTAAAACCAACAG 59.362 41.667 0.00 0.00 0.00 3.16
222 223 4.638865 GGACAAGTGAGTAAAACCAACAGT 59.361 41.667 0.00 0.00 0.00 3.55
223 224 5.124936 GGACAAGTGAGTAAAACCAACAGTT 59.875 40.000 0.00 0.00 41.81 3.16
232 233 2.694616 AACCAACAGTTTAGGGGCAT 57.305 45.000 0.00 0.00 33.89 4.40
233 234 3.818295 AACCAACAGTTTAGGGGCATA 57.182 42.857 0.00 0.00 33.89 3.14
234 235 3.818295 ACCAACAGTTTAGGGGCATAA 57.182 42.857 0.00 0.00 0.00 1.90
235 236 3.427573 ACCAACAGTTTAGGGGCATAAC 58.572 45.455 0.00 0.00 0.00 1.89
236 237 3.075432 ACCAACAGTTTAGGGGCATAACT 59.925 43.478 0.00 0.00 32.60 2.24
239 240 3.644966 CAGTTTAGGGGCATAACTGGA 57.355 47.619 0.00 0.00 43.03 3.86
240 241 4.170468 CAGTTTAGGGGCATAACTGGAT 57.830 45.455 0.00 0.00 43.03 3.41
241 242 4.536765 CAGTTTAGGGGCATAACTGGATT 58.463 43.478 0.00 0.00 43.03 3.01
242 243 4.956075 CAGTTTAGGGGCATAACTGGATTT 59.044 41.667 0.00 0.00 43.03 2.17
243 244 5.422012 CAGTTTAGGGGCATAACTGGATTTT 59.578 40.000 0.00 0.00 43.03 1.82
244 245 6.022958 AGTTTAGGGGCATAACTGGATTTTT 58.977 36.000 0.00 0.00 31.31 1.94
286 287 7.839680 ATGTCATCAATAAATTAAGGACCCC 57.160 36.000 0.00 0.00 0.00 4.95
287 288 5.825679 TGTCATCAATAAATTAAGGACCCCG 59.174 40.000 0.00 0.00 0.00 5.73
288 289 6.059484 GTCATCAATAAATTAAGGACCCCGA 58.941 40.000 0.00 0.00 0.00 5.14
289 290 6.715264 GTCATCAATAAATTAAGGACCCCGAT 59.285 38.462 0.00 0.00 0.00 4.18
290 291 7.881232 GTCATCAATAAATTAAGGACCCCGATA 59.119 37.037 0.00 0.00 0.00 2.92
291 292 8.441572 TCATCAATAAATTAAGGACCCCGATAA 58.558 33.333 0.00 0.00 0.00 1.75
292 293 9.073475 CATCAATAAATTAAGGACCCCGATAAA 57.927 33.333 0.00 0.00 0.00 1.40
293 294 9.649316 ATCAATAAATTAAGGACCCCGATAAAA 57.351 29.630 0.00 0.00 0.00 1.52
294 295 9.649316 TCAATAAATTAAGGACCCCGATAAAAT 57.351 29.630 0.00 0.00 0.00 1.82
295 296 9.908152 CAATAAATTAAGGACCCCGATAAAATC 57.092 33.333 0.00 0.00 0.00 2.17
296 297 6.971726 AAATTAAGGACCCCGATAAAATCC 57.028 37.500 0.00 0.00 0.00 3.01
297 298 2.632987 AAGGACCCCGATAAAATCCG 57.367 50.000 0.00 0.00 34.46 4.18
298 299 1.797320 AGGACCCCGATAAAATCCGA 58.203 50.000 0.00 0.00 34.46 4.55
299 300 2.121129 AGGACCCCGATAAAATCCGAA 58.879 47.619 0.00 0.00 34.46 4.30
300 301 2.158856 AGGACCCCGATAAAATCCGAAC 60.159 50.000 0.00 0.00 34.46 3.95
301 302 1.862827 GACCCCGATAAAATCCGAACG 59.137 52.381 0.00 0.00 0.00 3.95
302 303 1.207811 ACCCCGATAAAATCCGAACGT 59.792 47.619 0.00 0.00 0.00 3.99
303 304 2.282407 CCCCGATAAAATCCGAACGTT 58.718 47.619 0.00 0.00 0.00 3.99
304 305 2.286025 CCCCGATAAAATCCGAACGTTC 59.714 50.000 18.47 18.47 0.00 3.95
310 311 6.405216 CGATAAAATCCGAACGTTCGTATTT 58.595 36.000 34.34 34.34 46.42 1.40
315 316 6.017325 AAATCCGAACGTTCGTATTTTAAGC 58.983 36.000 34.34 6.75 43.52 3.09
316 317 6.347563 AAATCCGAACGTTCGTATTTTAAGCA 60.348 34.615 34.34 16.18 43.52 3.91
317 318 7.624764 AAATCCGAACGTTCGTATTTTAAGCAT 60.625 33.333 34.34 19.59 43.52 3.79
319 320 6.826227 CGAACGTTCGTATTTTAAGCATTT 57.174 33.333 35.92 0.00 45.09 2.32
320 321 6.883578 CGAACGTTCGTATTTTAAGCATTTC 58.116 36.000 35.92 1.91 45.09 2.17
321 322 6.517034 CGAACGTTCGTATTTTAAGCATTTCA 59.483 34.615 35.92 0.00 45.09 2.69
322 323 7.215568 CGAACGTTCGTATTTTAAGCATTTCAT 59.784 33.333 35.92 0.00 45.09 2.57
323 324 7.948513 ACGTTCGTATTTTAAGCATTTCATC 57.051 32.000 0.00 0.00 0.00 2.92
324 325 6.964934 ACGTTCGTATTTTAAGCATTTCATCC 59.035 34.615 0.00 0.00 0.00 3.51
325 326 6.413818 CGTTCGTATTTTAAGCATTTCATCCC 59.586 38.462 0.00 0.00 0.00 3.85
326 327 6.055231 TCGTATTTTAAGCATTTCATCCCG 57.945 37.500 0.00 0.00 0.00 5.14
327 328 5.818336 TCGTATTTTAAGCATTTCATCCCGA 59.182 36.000 0.00 0.00 0.00 5.14
328 329 6.316640 TCGTATTTTAAGCATTTCATCCCGAA 59.683 34.615 0.00 0.00 0.00 4.30
329 330 6.413818 CGTATTTTAAGCATTTCATCCCGAAC 59.586 38.462 0.00 0.00 31.73 3.95
330 331 4.349663 TTTAAGCATTTCATCCCGAACG 57.650 40.909 0.00 0.00 31.73 3.95
331 332 1.821216 AAGCATTTCATCCCGAACGT 58.179 45.000 0.00 0.00 31.73 3.99
332 333 1.821216 AGCATTTCATCCCGAACGTT 58.179 45.000 0.00 0.00 31.73 3.99
333 334 2.159382 AGCATTTCATCCCGAACGTTT 58.841 42.857 0.46 0.00 31.73 3.60
334 335 2.556622 AGCATTTCATCCCGAACGTTTT 59.443 40.909 0.46 0.00 31.73 2.43
335 336 3.005367 AGCATTTCATCCCGAACGTTTTT 59.995 39.130 0.46 0.00 31.73 1.94
336 337 4.216687 AGCATTTCATCCCGAACGTTTTTA 59.783 37.500 0.46 0.00 31.73 1.52
337 338 4.322539 GCATTTCATCCCGAACGTTTTTAC 59.677 41.667 0.46 0.00 31.73 2.01
338 339 5.453648 CATTTCATCCCGAACGTTTTTACA 58.546 37.500 0.46 0.00 31.73 2.41
339 340 5.692613 TTTCATCCCGAACGTTTTTACAT 57.307 34.783 0.46 0.00 31.73 2.29
340 341 4.671880 TCATCCCGAACGTTTTTACATG 57.328 40.909 0.46 2.27 0.00 3.21
341 342 3.437395 TCATCCCGAACGTTTTTACATGG 59.563 43.478 0.46 0.00 0.00 3.66
342 343 1.536331 TCCCGAACGTTTTTACATGGC 59.464 47.619 0.46 0.00 0.00 4.40
343 344 1.267261 CCCGAACGTTTTTACATGGCA 59.733 47.619 0.46 0.00 0.00 4.92
344 345 2.287668 CCCGAACGTTTTTACATGGCAA 60.288 45.455 0.46 0.00 0.00 4.52
345 346 2.722116 CCGAACGTTTTTACATGGCAAC 59.278 45.455 0.46 0.00 0.00 4.17
346 347 3.549221 CCGAACGTTTTTACATGGCAACT 60.549 43.478 0.46 0.00 37.61 3.16
347 348 4.039032 CGAACGTTTTTACATGGCAACTT 58.961 39.130 0.46 0.00 37.61 2.66
348 349 4.501198 CGAACGTTTTTACATGGCAACTTT 59.499 37.500 0.46 0.00 37.61 2.66
349 350 5.681982 CGAACGTTTTTACATGGCAACTTTA 59.318 36.000 0.46 0.00 37.61 1.85
350 351 6.129561 CGAACGTTTTTACATGGCAACTTTAG 60.130 38.462 0.46 0.00 37.61 1.85
351 352 6.139048 ACGTTTTTACATGGCAACTTTAGT 57.861 33.333 0.00 0.00 37.61 2.24
352 353 6.566141 ACGTTTTTACATGGCAACTTTAGTT 58.434 32.000 0.00 0.00 39.12 2.24
364 365 3.107642 ACTTTAGTTGACGTGAGGTGG 57.892 47.619 0.00 0.00 0.00 4.61
365 366 1.798813 CTTTAGTTGACGTGAGGTGGC 59.201 52.381 0.00 0.00 0.00 5.01
366 367 0.753867 TTAGTTGACGTGAGGTGGCA 59.246 50.000 0.00 0.00 0.00 4.92
367 368 0.753867 TAGTTGACGTGAGGTGGCAA 59.246 50.000 0.00 0.00 0.00 4.52
368 369 0.108585 AGTTGACGTGAGGTGGCAAT 59.891 50.000 0.00 0.00 0.00 3.56
369 370 0.951558 GTTGACGTGAGGTGGCAATT 59.048 50.000 0.00 0.00 0.00 2.32
370 371 1.336755 GTTGACGTGAGGTGGCAATTT 59.663 47.619 0.00 0.00 0.00 1.82
371 372 1.686355 TGACGTGAGGTGGCAATTTT 58.314 45.000 0.00 0.00 0.00 1.82
372 373 2.852449 TGACGTGAGGTGGCAATTTTA 58.148 42.857 0.00 0.00 0.00 1.52
373 374 2.811431 TGACGTGAGGTGGCAATTTTAG 59.189 45.455 0.00 0.00 0.00 1.85
374 375 2.812011 GACGTGAGGTGGCAATTTTAGT 59.188 45.455 0.00 0.00 0.00 2.24
375 376 3.219281 ACGTGAGGTGGCAATTTTAGTT 58.781 40.909 0.00 0.00 0.00 2.24
376 377 3.004315 ACGTGAGGTGGCAATTTTAGTTG 59.996 43.478 0.00 0.00 0.00 3.16
377 378 3.004315 CGTGAGGTGGCAATTTTAGTTGT 59.996 43.478 0.00 0.00 0.00 3.32
378 379 4.499019 CGTGAGGTGGCAATTTTAGTTGTT 60.499 41.667 0.00 0.00 0.00 2.83
379 380 5.278071 CGTGAGGTGGCAATTTTAGTTGTTA 60.278 40.000 0.00 0.00 0.00 2.41
380 381 6.508777 GTGAGGTGGCAATTTTAGTTGTTAA 58.491 36.000 0.00 0.00 0.00 2.01
381 382 6.640907 GTGAGGTGGCAATTTTAGTTGTTAAG 59.359 38.462 0.00 0.00 0.00 1.85
382 383 5.538118 AGGTGGCAATTTTAGTTGTTAAGC 58.462 37.500 0.00 0.00 0.00 3.09
383 384 4.688879 GGTGGCAATTTTAGTTGTTAAGCC 59.311 41.667 0.00 0.00 39.95 4.35
384 385 5.293560 GTGGCAATTTTAGTTGTTAAGCCA 58.706 37.500 0.00 0.00 46.31 4.75
385 386 6.107901 TGGCAATTTTAGTTGTTAAGCCAT 57.892 33.333 0.00 0.00 43.93 4.40
386 387 5.931146 TGGCAATTTTAGTTGTTAAGCCATG 59.069 36.000 0.00 0.00 43.93 3.66
387 388 5.351189 GGCAATTTTAGTTGTTAAGCCATGG 59.649 40.000 7.63 7.63 39.35 3.66
388 389 5.163864 GCAATTTTAGTTGTTAAGCCATGGC 60.164 40.000 30.12 30.12 42.33 4.40
389 390 5.736951 ATTTTAGTTGTTAAGCCATGGCA 57.263 34.783 37.18 16.60 44.88 4.92
390 391 5.537300 TTTTAGTTGTTAAGCCATGGCAA 57.463 34.783 37.18 21.78 44.88 4.52
391 392 4.513198 TTAGTTGTTAAGCCATGGCAAC 57.487 40.909 37.18 30.71 44.88 4.17
392 393 2.597455 AGTTGTTAAGCCATGGCAACT 58.403 42.857 37.18 30.76 43.09 3.16
393 394 2.965147 AGTTGTTAAGCCATGGCAACTT 59.035 40.909 37.18 24.82 44.79 2.66
394 395 3.387699 AGTTGTTAAGCCATGGCAACTTT 59.612 39.130 37.18 24.46 44.79 2.66
395 396 3.383620 TGTTAAGCCATGGCAACTTTG 57.616 42.857 37.18 0.00 44.88 2.77
396 397 2.697751 TGTTAAGCCATGGCAACTTTGT 59.302 40.909 37.18 13.31 44.88 2.83
397 398 3.133721 TGTTAAGCCATGGCAACTTTGTT 59.866 39.130 37.18 22.68 44.88 2.83
398 399 2.531522 AAGCCATGGCAACTTTGTTC 57.468 45.000 37.18 4.97 44.88 3.18
399 400 0.681175 AGCCATGGCAACTTTGTTCC 59.319 50.000 37.18 4.41 44.88 3.62
400 401 0.392336 GCCATGGCAACTTTGTTCCA 59.608 50.000 32.08 0.00 41.49 3.53
401 402 1.202627 GCCATGGCAACTTTGTTCCAA 60.203 47.619 32.08 0.00 41.49 3.53
402 403 2.550639 GCCATGGCAACTTTGTTCCAAT 60.551 45.455 32.08 0.00 41.49 3.16
403 404 3.742385 CCATGGCAACTTTGTTCCAATT 58.258 40.909 0.00 0.00 37.61 2.32
404 405 4.136051 CCATGGCAACTTTGTTCCAATTT 58.864 39.130 0.00 0.00 37.61 1.82
405 406 4.023878 CCATGGCAACTTTGTTCCAATTTG 60.024 41.667 0.00 0.00 37.61 2.32
406 407 4.213564 TGGCAACTTTGTTCCAATTTGT 57.786 36.364 0.00 0.00 37.61 2.83
407 408 4.583871 TGGCAACTTTGTTCCAATTTGTT 58.416 34.783 0.00 0.00 37.61 2.83
408 409 5.006386 TGGCAACTTTGTTCCAATTTGTTT 58.994 33.333 0.00 0.00 37.61 2.83
409 410 5.474876 TGGCAACTTTGTTCCAATTTGTTTT 59.525 32.000 0.00 0.00 37.61 2.43
410 411 6.015940 TGGCAACTTTGTTCCAATTTGTTTTT 60.016 30.769 0.00 0.00 37.61 1.94
434 435 9.766277 TTTTTGTCAGAAAATTGCAATGTTTAC 57.234 25.926 15.98 14.09 0.00 2.01
435 436 7.475771 TTGTCAGAAAATTGCAATGTTTACC 57.524 32.000 15.98 4.06 0.00 2.85
436 437 6.577103 TGTCAGAAAATTGCAATGTTTACCA 58.423 32.000 15.98 8.19 0.00 3.25
437 438 7.044181 TGTCAGAAAATTGCAATGTTTACCAA 58.956 30.769 15.98 0.83 0.00 3.67
438 439 7.010923 TGTCAGAAAATTGCAATGTTTACCAAC 59.989 33.333 15.98 10.54 0.00 3.77
439 440 6.481644 TCAGAAAATTGCAATGTTTACCAACC 59.518 34.615 15.98 1.98 31.02 3.77
440 441 6.482973 CAGAAAATTGCAATGTTTACCAACCT 59.517 34.615 15.98 4.23 31.02 3.50
441 442 6.705825 AGAAAATTGCAATGTTTACCAACCTC 59.294 34.615 15.98 0.56 31.02 3.85
442 443 5.543507 AATTGCAATGTTTACCAACCTCA 57.456 34.783 13.82 0.00 31.02 3.86
443 444 4.314740 TTGCAATGTTTACCAACCTCAC 57.685 40.909 0.00 0.00 31.02 3.51
444 445 2.292016 TGCAATGTTTACCAACCTCACG 59.708 45.455 0.00 0.00 31.02 4.35
445 446 2.920647 GCAATGTTTACCAACCTCACGC 60.921 50.000 0.00 0.00 31.02 5.34
446 447 1.153353 ATGTTTACCAACCTCACGCG 58.847 50.000 3.53 3.53 31.02 6.01
447 448 0.104487 TGTTTACCAACCTCACGCGA 59.896 50.000 15.93 0.00 31.02 5.87
448 449 1.219646 GTTTACCAACCTCACGCGAA 58.780 50.000 15.93 0.00 0.00 4.70
449 450 1.070376 GTTTACCAACCTCACGCGAAC 60.070 52.381 15.93 0.00 0.00 3.95
450 451 0.390124 TTACCAACCTCACGCGAACT 59.610 50.000 15.93 0.00 0.00 3.01
451 452 1.246649 TACCAACCTCACGCGAACTA 58.753 50.000 15.93 0.00 0.00 2.24
452 453 0.390124 ACCAACCTCACGCGAACTAA 59.610 50.000 15.93 0.00 0.00 2.24
453 454 1.202557 ACCAACCTCACGCGAACTAAA 60.203 47.619 15.93 0.00 0.00 1.85
454 455 1.459592 CCAACCTCACGCGAACTAAAG 59.540 52.381 15.93 0.00 0.00 1.85
455 456 2.132762 CAACCTCACGCGAACTAAAGT 58.867 47.619 15.93 0.00 0.00 2.66
456 457 2.521105 ACCTCACGCGAACTAAAGTT 57.479 45.000 15.93 0.00 41.64 2.66
457 458 2.132762 ACCTCACGCGAACTAAAGTTG 58.867 47.619 15.93 0.00 38.56 3.16
458 459 1.136336 CCTCACGCGAACTAAAGTTGC 60.136 52.381 15.93 4.06 38.56 4.17
459 460 0.863144 TCACGCGAACTAAAGTTGCC 59.137 50.000 15.93 0.00 38.56 4.52
460 461 0.584396 CACGCGAACTAAAGTTGCCA 59.416 50.000 15.93 0.00 38.56 4.92
461 462 1.196808 CACGCGAACTAAAGTTGCCAT 59.803 47.619 15.93 0.00 38.56 4.40
462 463 1.196808 ACGCGAACTAAAGTTGCCATG 59.803 47.619 15.93 0.00 38.56 3.66
463 464 1.463056 CGCGAACTAAAGTTGCCATGA 59.537 47.619 0.00 0.00 38.56 3.07
464 465 2.095969 CGCGAACTAAAGTTGCCATGAA 60.096 45.455 0.00 0.00 38.56 2.57
465 466 3.608241 CGCGAACTAAAGTTGCCATGAAA 60.608 43.478 0.00 0.00 38.56 2.69
466 467 4.295051 GCGAACTAAAGTTGCCATGAAAA 58.705 39.130 0.00 0.00 38.56 2.29
467 468 4.742659 GCGAACTAAAGTTGCCATGAAAAA 59.257 37.500 0.00 0.00 38.56 1.94
468 469 5.332280 GCGAACTAAAGTTGCCATGAAAAAC 60.332 40.000 0.00 0.00 38.56 2.43
469 470 5.108405 CGAACTAAAGTTGCCATGAAAAACG 60.108 40.000 0.00 0.00 38.56 3.60
470 471 5.257082 ACTAAAGTTGCCATGAAAAACGT 57.743 34.783 0.00 0.00 0.00 3.99
471 472 5.656480 ACTAAAGTTGCCATGAAAAACGTT 58.344 33.333 0.00 0.00 31.87 3.99
472 473 5.746721 ACTAAAGTTGCCATGAAAAACGTTC 59.253 36.000 0.00 0.00 30.16 3.95
473 474 2.726633 AGTTGCCATGAAAAACGTTCG 58.273 42.857 0.00 0.00 0.00 3.95
474 475 1.784283 GTTGCCATGAAAAACGTTCGG 59.216 47.619 0.00 0.00 0.00 4.30
475 476 0.312416 TGCCATGAAAAACGTTCGGG 59.688 50.000 0.00 0.00 0.00 5.14
476 477 0.312729 GCCATGAAAAACGTTCGGGT 59.687 50.000 0.00 0.00 0.00 5.28
477 478 1.664874 GCCATGAAAAACGTTCGGGTC 60.665 52.381 0.00 0.00 0.00 4.46
478 479 1.068816 CCATGAAAAACGTTCGGGTCC 60.069 52.381 0.00 0.00 0.00 4.46
479 480 1.068816 CATGAAAAACGTTCGGGTCCC 60.069 52.381 0.00 0.00 0.00 4.46
480 481 0.818852 TGAAAAACGTTCGGGTCCCC 60.819 55.000 0.00 0.00 0.00 4.81
481 482 0.818852 GAAAAACGTTCGGGTCCCCA 60.819 55.000 0.00 0.00 35.37 4.96
482 483 0.178984 AAAAACGTTCGGGTCCCCAT 60.179 50.000 0.00 0.00 35.37 4.00
483 484 0.891904 AAAACGTTCGGGTCCCCATG 60.892 55.000 0.00 0.00 35.37 3.66
484 485 1.770749 AAACGTTCGGGTCCCCATGA 61.771 55.000 0.00 0.00 35.37 3.07
485 486 1.559065 AACGTTCGGGTCCCCATGAT 61.559 55.000 1.00 0.00 35.37 2.45
486 487 1.223487 CGTTCGGGTCCCCATGATT 59.777 57.895 1.00 0.00 35.37 2.57
487 488 0.466543 CGTTCGGGTCCCCATGATTA 59.533 55.000 1.00 0.00 35.37 1.75
488 489 1.134340 CGTTCGGGTCCCCATGATTAA 60.134 52.381 1.00 0.00 35.37 1.40
489 490 2.681390 CGTTCGGGTCCCCATGATTAAA 60.681 50.000 1.00 0.00 35.37 1.52
490 491 3.358118 GTTCGGGTCCCCATGATTAAAA 58.642 45.455 1.00 0.00 35.37 1.52
491 492 3.958147 GTTCGGGTCCCCATGATTAAAAT 59.042 43.478 1.00 0.00 35.37 1.82
492 493 3.827722 TCGGGTCCCCATGATTAAAATC 58.172 45.455 1.00 0.00 35.37 2.17
493 494 2.890945 CGGGTCCCCATGATTAAAATCC 59.109 50.000 1.00 0.00 33.35 3.01
494 495 2.890945 GGGTCCCCATGATTAAAATCCG 59.109 50.000 0.00 0.00 33.70 4.18
495 496 3.435890 GGGTCCCCATGATTAAAATCCGA 60.436 47.826 0.00 0.00 33.70 4.55
496 497 4.211920 GGTCCCCATGATTAAAATCCGAA 58.788 43.478 0.00 0.00 34.50 4.30
497 498 4.037565 GGTCCCCATGATTAAAATCCGAAC 59.962 45.833 0.00 0.00 34.50 3.95
498 499 3.880490 TCCCCATGATTAAAATCCGAACG 59.120 43.478 0.00 0.00 34.50 3.95
499 500 3.630312 CCCCATGATTAAAATCCGAACGT 59.370 43.478 0.00 0.00 34.50 3.99
500 501 4.097286 CCCCATGATTAAAATCCGAACGTT 59.903 41.667 0.00 0.00 34.50 3.99
501 502 5.270853 CCCATGATTAAAATCCGAACGTTC 58.729 41.667 18.47 18.47 34.50 3.95
502 503 5.163703 CCCATGATTAAAATCCGAACGTTCA 60.164 40.000 26.71 9.90 34.50 3.18
503 504 5.965334 CCATGATTAAAATCCGAACGTTCAG 59.035 40.000 26.71 16.79 34.50 3.02
504 505 5.539582 TGATTAAAATCCGAACGTTCAGG 57.460 39.130 26.71 25.28 34.50 3.86
505 506 5.239351 TGATTAAAATCCGAACGTTCAGGA 58.761 37.500 30.22 30.22 35.49 3.86
506 507 5.878116 TGATTAAAATCCGAACGTTCAGGAT 59.122 36.000 31.29 31.29 40.07 3.24
507 508 6.373216 TGATTAAAATCCGAACGTTCAGGATT 59.627 34.615 35.46 35.46 44.51 3.01
509 510 7.670009 TTAAAATCCGAACGTTCAGGATTTA 57.330 32.000 40.97 33.47 46.76 1.40
510 511 6.753107 AAAATCCGAACGTTCAGGATTTAT 57.247 33.333 40.97 33.80 46.76 1.40
511 512 5.986004 AATCCGAACGTTCAGGATTTATC 57.014 39.130 35.46 12.12 42.38 1.75
512 513 4.459390 TCCGAACGTTCAGGATTTATCA 57.541 40.909 26.94 11.72 0.00 2.15
513 514 5.018539 TCCGAACGTTCAGGATTTATCAT 57.981 39.130 26.94 0.00 0.00 2.45
514 515 5.424757 TCCGAACGTTCAGGATTTATCATT 58.575 37.500 26.94 0.00 0.00 2.57
515 516 5.293324 TCCGAACGTTCAGGATTTATCATTG 59.707 40.000 26.94 9.49 0.00 2.82
516 517 4.963953 CGAACGTTCAGGATTTATCATTGC 59.036 41.667 26.71 0.00 0.00 3.56
517 518 4.900635 ACGTTCAGGATTTATCATTGCC 57.099 40.909 0.00 0.00 0.00 4.52
518 519 4.269183 ACGTTCAGGATTTATCATTGCCA 58.731 39.130 0.00 0.00 0.00 4.92
519 520 4.889409 ACGTTCAGGATTTATCATTGCCAT 59.111 37.500 0.00 0.00 0.00 4.40
520 521 6.061441 ACGTTCAGGATTTATCATTGCCATA 58.939 36.000 0.00 0.00 0.00 2.74
521 522 6.545666 ACGTTCAGGATTTATCATTGCCATAA 59.454 34.615 0.00 0.00 0.00 1.90
522 523 7.068103 ACGTTCAGGATTTATCATTGCCATAAA 59.932 33.333 0.00 0.00 31.76 1.40
523 524 8.084073 CGTTCAGGATTTATCATTGCCATAAAT 58.916 33.333 4.03 4.03 38.55 1.40
524 525 9.768662 GTTCAGGATTTATCATTGCCATAAATT 57.231 29.630 5.35 0.00 36.82 1.82
590 591 6.800072 GCTATAAGCTACCCCTAGATCATT 57.200 41.667 0.00 0.00 38.45 2.57
591 592 7.899648 GCTATAAGCTACCCCTAGATCATTA 57.100 40.000 0.00 0.00 38.45 1.90
592 593 8.485578 GCTATAAGCTACCCCTAGATCATTAT 57.514 38.462 0.00 0.00 38.45 1.28
593 594 9.589461 GCTATAAGCTACCCCTAGATCATTATA 57.411 37.037 0.00 0.00 38.45 0.98
598 599 9.567702 AAGCTACCCCTAGATCATTATAAATCT 57.432 33.333 5.27 5.27 36.28 2.40
620 621 9.817809 AATCTATTGTGCGTTTAATTCTAGAGA 57.182 29.630 0.00 0.00 0.00 3.10
662 663 4.023450 TGCAGCATGTGAGAAAAGAAGAAG 60.023 41.667 0.00 0.00 39.31 2.85
684 685 9.482627 AGAAGTAGCTTATTATAGAATGCACAC 57.517 33.333 0.00 0.00 0.00 3.82
717 718 2.433970 CCATTCTCTCTTGACCTCTCCC 59.566 54.545 0.00 0.00 0.00 4.30
733 734 1.989508 CCCTCCATTTTGGCCACCC 60.990 63.158 3.88 0.00 37.47 4.61
859 865 1.948104 TGTTCTTGGTCCACGAACAG 58.052 50.000 30.31 10.03 43.91 3.16
887 893 2.066999 AAGGTGAGGATCGGAGGCC 61.067 63.158 0.00 0.00 38.61 5.19
888 894 2.764128 GGTGAGGATCGGAGGCCA 60.764 66.667 5.01 0.00 38.61 5.36
1056 1065 2.629656 GGCCAGCAGCGTGTTGATT 61.630 57.895 0.00 0.00 45.17 2.57
1289 1315 3.066760 GCCGGCAGCTAATTTCATTACTT 59.933 43.478 24.80 0.00 38.99 2.24
1338 1365 8.651588 GTTAGTATCAAATCTGTTGTCAGTGAG 58.348 37.037 0.00 0.00 41.91 3.51
1409 1440 8.176814 CAATGTTTGCATGGTTATGAAGTAAG 57.823 34.615 0.00 0.00 36.36 2.34
1495 1528 3.262660 AGTGTGAAGCTGATTGGAGATCA 59.737 43.478 0.00 0.00 0.00 2.92
1538 1571 9.490379 GATTATATCAACTAAATTCCACCGACT 57.510 33.333 0.00 0.00 0.00 4.18
1547 1580 2.046314 CCACCGACTCCCGCAAAT 60.046 61.111 0.00 0.00 36.84 2.32
1548 1581 1.219664 CCACCGACTCCCGCAAATA 59.780 57.895 0.00 0.00 36.84 1.40
1549 1582 0.391927 CCACCGACTCCCGCAAATAA 60.392 55.000 0.00 0.00 36.84 1.40
1550 1583 1.444836 CACCGACTCCCGCAAATAAA 58.555 50.000 0.00 0.00 36.84 1.40
1551 1584 1.807742 CACCGACTCCCGCAAATAAAA 59.192 47.619 0.00 0.00 36.84 1.52
1552 1585 2.226912 CACCGACTCCCGCAAATAAAAA 59.773 45.455 0.00 0.00 36.84 1.94
1620 1656 1.588404 CGACGTGATGGTAGATGCAAC 59.412 52.381 0.00 0.00 0.00 4.17
1632 1668 1.280710 AGATGCAACCGTAATGGACCA 59.719 47.619 0.00 0.00 42.00 4.02
1647 1683 3.831323 TGGACCACAACATCTGAACAAT 58.169 40.909 0.00 0.00 0.00 2.71
1648 1684 4.214310 TGGACCACAACATCTGAACAATT 58.786 39.130 0.00 0.00 0.00 2.32
1685 1723 4.871557 AGACTAAACTGCACGTGTTGTTTA 59.128 37.500 28.52 28.52 34.88 2.01
1730 2425 4.490743 CAATATGTCACGTCTACACACCA 58.509 43.478 2.50 0.00 0.00 4.17
1868 2564 5.808366 TCTTGAAGGAACATCAGTGTAGT 57.192 39.130 0.00 0.00 37.36 2.73
1869 2565 6.911250 TCTTGAAGGAACATCAGTGTAGTA 57.089 37.500 0.00 0.00 37.36 1.82
2024 2725 7.943079 TCCATCCATATAGCAAATAATGTGG 57.057 36.000 0.00 0.00 36.12 4.17
2025 2726 7.697946 TCCATCCATATAGCAAATAATGTGGA 58.302 34.615 3.69 3.69 44.40 4.02
2086 2787 6.015856 TCTCTGAATTATCCAGACGATCCTTC 60.016 42.308 0.00 0.00 35.89 3.46
2192 2895 6.717084 TGTCCACTACTGATCTGGTGATATAG 59.283 42.308 4.49 0.00 32.19 1.31
2217 2920 6.238130 GATGCTTCCCGTGAAGAATAACTTAC 60.238 42.308 12.11 0.00 45.33 2.34
2218 2921 8.534866 GATGCTTCCCGTGAAGAATAACTTACA 61.535 40.741 12.11 0.00 45.33 2.41
2224 2928 6.183360 CCCGTGAAGAATAACTTACATGCAAT 60.183 38.462 0.00 0.00 39.13 3.56
2229 2933 6.694411 GAAGAATAACTTACATGCAATGCAGG 59.306 38.462 18.78 18.78 43.26 4.85
2239 2943 0.305922 GCAATGCAGGCATCGTAGTC 59.694 55.000 7.29 0.00 35.31 2.59
2246 2950 2.607187 CAGGCATCGTAGTCGTTTTCT 58.393 47.619 0.00 0.00 38.33 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.980844 GCATGCTGTGTCAAATTGTCG 59.019 47.619 11.37 0.00 0.00 4.35
2 3 1.337703 ACGCATGCTGTGTCAAATTGT 59.662 42.857 17.13 0.00 36.11 2.71
3 4 2.054687 ACGCATGCTGTGTCAAATTG 57.945 45.000 17.13 0.00 36.11 2.32
10 11 3.073678 TCTTATTTGACGCATGCTGTGT 58.926 40.909 17.13 6.24 44.78 3.72
11 12 3.745332 TCTTATTTGACGCATGCTGTG 57.255 42.857 17.13 2.44 0.00 3.66
12 13 6.260714 TCAATATCTTATTTGACGCATGCTGT 59.739 34.615 17.13 15.17 0.00 4.40
13 14 6.661669 TCAATATCTTATTTGACGCATGCTG 58.338 36.000 17.13 11.87 0.00 4.41
14 15 6.866010 TCAATATCTTATTTGACGCATGCT 57.134 33.333 17.13 2.38 0.00 3.79
15 16 6.033196 GCATCAATATCTTATTTGACGCATGC 59.967 38.462 7.91 7.91 39.93 4.06
16 17 6.247791 CGCATCAATATCTTATTTGACGCATG 59.752 38.462 4.87 0.00 40.12 4.06
17 18 6.309436 CGCATCAATATCTTATTTGACGCAT 58.691 36.000 4.87 0.00 40.12 4.73
18 19 5.334028 CCGCATCAATATCTTATTTGACGCA 60.334 40.000 4.87 0.00 40.12 5.24
19 20 5.082059 CCGCATCAATATCTTATTTGACGC 58.918 41.667 0.00 0.00 37.61 5.19
20 21 5.082059 GCCGCATCAATATCTTATTTGACG 58.918 41.667 0.00 0.00 34.87 4.35
21 22 5.393962 GGCCGCATCAATATCTTATTTGAC 58.606 41.667 0.00 0.00 34.87 3.18
22 23 4.458989 GGGCCGCATCAATATCTTATTTGA 59.541 41.667 0.00 0.00 36.38 2.69
23 24 4.672542 CGGGCCGCATCAATATCTTATTTG 60.673 45.833 15.42 0.00 0.00 2.32
24 25 3.440173 CGGGCCGCATCAATATCTTATTT 59.560 43.478 15.42 0.00 0.00 1.40
25 26 3.009723 CGGGCCGCATCAATATCTTATT 58.990 45.455 15.42 0.00 0.00 1.40
26 27 2.236146 TCGGGCCGCATCAATATCTTAT 59.764 45.455 23.83 0.00 0.00 1.73
27 28 1.621317 TCGGGCCGCATCAATATCTTA 59.379 47.619 23.83 0.00 0.00 2.10
28 29 0.396435 TCGGGCCGCATCAATATCTT 59.604 50.000 23.83 0.00 0.00 2.40
29 30 0.036952 CTCGGGCCGCATCAATATCT 60.037 55.000 23.83 0.00 0.00 1.98
30 31 1.639298 GCTCGGGCCGCATCAATATC 61.639 60.000 23.83 0.00 0.00 1.63
31 32 1.672356 GCTCGGGCCGCATCAATAT 60.672 57.895 23.83 0.00 0.00 1.28
32 33 2.280797 GCTCGGGCCGCATCAATA 60.281 61.111 23.83 0.00 0.00 1.90
43 44 4.712425 ACCGTTCGTTCGCTCGGG 62.712 66.667 22.11 9.78 46.06 5.14
44 45 3.467119 CACCGTTCGTTCGCTCGG 61.467 66.667 18.96 18.96 46.98 4.63
45 46 4.117372 GCACCGTTCGTTCGCTCG 62.117 66.667 0.00 0.00 0.00 5.03
46 47 1.005294 TTAGCACCGTTCGTTCGCTC 61.005 55.000 0.00 0.00 34.18 5.03
47 48 1.007038 TTAGCACCGTTCGTTCGCT 60.007 52.632 0.00 0.00 36.72 4.93
48 49 1.005294 TCTTAGCACCGTTCGTTCGC 61.005 55.000 0.00 0.00 0.00 4.70
49 50 1.411394 TTCTTAGCACCGTTCGTTCG 58.589 50.000 0.00 0.00 0.00 3.95
50 51 2.096565 GGTTTCTTAGCACCGTTCGTTC 60.097 50.000 0.00 0.00 0.00 3.95
51 52 1.869132 GGTTTCTTAGCACCGTTCGTT 59.131 47.619 0.00 0.00 0.00 3.85
52 53 1.069668 AGGTTTCTTAGCACCGTTCGT 59.930 47.619 0.00 0.00 38.21 3.85
53 54 1.459592 CAGGTTTCTTAGCACCGTTCG 59.540 52.381 0.00 0.00 38.21 3.95
54 55 2.762745 TCAGGTTTCTTAGCACCGTTC 58.237 47.619 0.00 0.00 38.21 3.95
55 56 2.922740 TCAGGTTTCTTAGCACCGTT 57.077 45.000 0.00 0.00 38.21 4.44
56 57 3.418684 AATCAGGTTTCTTAGCACCGT 57.581 42.857 0.00 0.00 38.21 4.83
57 58 4.342352 GAAATCAGGTTTCTTAGCACCG 57.658 45.455 0.00 0.00 42.37 4.94
66 67 1.821136 CTGGCCCAGAAATCAGGTTTC 59.179 52.381 4.15 0.00 45.31 2.78
67 68 1.147817 ACTGGCCCAGAAATCAGGTTT 59.852 47.619 19.90 0.00 35.18 3.27
68 69 0.779997 ACTGGCCCAGAAATCAGGTT 59.220 50.000 19.90 0.00 35.18 3.50
69 70 0.329596 GACTGGCCCAGAAATCAGGT 59.670 55.000 19.90 0.00 35.18 4.00
70 71 0.394899 GGACTGGCCCAGAAATCAGG 60.395 60.000 19.90 0.00 35.18 3.86
71 72 0.329261 TGGACTGGCCCAGAAATCAG 59.671 55.000 19.90 0.00 35.18 2.90
72 73 0.776810 TTGGACTGGCCCAGAAATCA 59.223 50.000 19.90 6.85 37.53 2.57
73 74 1.923356 TTTGGACTGGCCCAGAAATC 58.077 50.000 19.90 4.31 37.53 2.17
74 75 2.181975 CATTTGGACTGGCCCAGAAAT 58.818 47.619 19.90 10.34 37.53 2.17
75 76 1.631405 CATTTGGACTGGCCCAGAAA 58.369 50.000 19.90 8.21 37.53 2.52
76 77 0.899717 GCATTTGGACTGGCCCAGAA 60.900 55.000 19.90 0.60 37.53 3.02
77 78 1.304381 GCATTTGGACTGGCCCAGA 60.304 57.895 19.90 0.00 37.53 3.86
78 79 1.607178 TGCATTTGGACTGGCCCAG 60.607 57.895 9.83 9.83 37.53 4.45
79 80 1.907807 GTGCATTTGGACTGGCCCA 60.908 57.895 0.00 0.00 34.97 5.36
80 81 2.973082 GTGCATTTGGACTGGCCC 59.027 61.111 0.00 0.00 34.97 5.80
81 82 2.568090 CGTGCATTTGGACTGGCC 59.432 61.111 0.00 0.00 33.97 5.36
82 83 1.971167 TCCGTGCATTTGGACTGGC 60.971 57.895 0.00 0.00 33.97 4.85
83 84 4.395519 TCCGTGCATTTGGACTGG 57.604 55.556 0.00 4.20 33.97 4.00
87 88 3.053291 GGCGTCCGTGCATTTGGA 61.053 61.111 0.00 0.00 36.28 3.53
88 89 3.326889 CTGGCGTCCGTGCATTTGG 62.327 63.158 0.00 0.00 36.28 3.28
89 90 2.176546 CTGGCGTCCGTGCATTTG 59.823 61.111 0.00 0.00 36.28 2.32
90 91 3.737172 GCTGGCGTCCGTGCATTT 61.737 61.111 0.00 0.00 36.28 2.32
95 96 4.728102 TTACCGCTGGCGTCCGTG 62.728 66.667 13.84 0.81 37.81 4.94
96 97 4.430765 CTTACCGCTGGCGTCCGT 62.431 66.667 13.84 7.31 37.81 4.69
97 98 4.124351 TCTTACCGCTGGCGTCCG 62.124 66.667 13.84 1.52 37.81 4.79
98 99 2.508663 GTCTTACCGCTGGCGTCC 60.509 66.667 13.84 0.00 37.81 4.79
99 100 1.660560 TAGGTCTTACCGCTGGCGTC 61.661 60.000 13.84 0.00 44.90 5.19
100 101 1.041447 ATAGGTCTTACCGCTGGCGT 61.041 55.000 13.84 5.01 44.90 5.68
101 102 0.104304 AATAGGTCTTACCGCTGGCG 59.896 55.000 8.08 8.08 44.90 5.69
102 103 2.626743 TCTAATAGGTCTTACCGCTGGC 59.373 50.000 0.00 0.00 44.90 4.85
103 104 4.931661 TTCTAATAGGTCTTACCGCTGG 57.068 45.455 0.00 0.00 44.90 4.85
104 105 5.629849 CGATTTCTAATAGGTCTTACCGCTG 59.370 44.000 0.00 0.00 44.90 5.18
105 106 5.278858 CCGATTTCTAATAGGTCTTACCGCT 60.279 44.000 0.00 0.00 44.90 5.52
106 107 4.922103 CCGATTTCTAATAGGTCTTACCGC 59.078 45.833 0.00 0.00 44.90 5.68
107 108 4.922103 GCCGATTTCTAATAGGTCTTACCG 59.078 45.833 0.00 0.00 44.90 4.02
108 109 5.695363 GTGCCGATTTCTAATAGGTCTTACC 59.305 44.000 0.00 0.00 38.99 2.85
109 110 5.401674 CGTGCCGATTTCTAATAGGTCTTAC 59.598 44.000 0.00 0.00 0.00 2.34
110 111 5.300034 TCGTGCCGATTTCTAATAGGTCTTA 59.700 40.000 0.00 0.00 0.00 2.10
111 112 4.098960 TCGTGCCGATTTCTAATAGGTCTT 59.901 41.667 0.00 0.00 0.00 3.01
112 113 3.635373 TCGTGCCGATTTCTAATAGGTCT 59.365 43.478 0.00 0.00 0.00 3.85
113 114 3.973657 TCGTGCCGATTTCTAATAGGTC 58.026 45.455 0.00 0.00 0.00 3.85
114 115 4.117685 GTTCGTGCCGATTTCTAATAGGT 58.882 43.478 0.00 0.00 35.23 3.08
115 116 4.116961 TGTTCGTGCCGATTTCTAATAGG 58.883 43.478 0.00 0.00 35.23 2.57
116 117 4.804139 ACTGTTCGTGCCGATTTCTAATAG 59.196 41.667 0.00 0.00 35.23 1.73
117 118 4.751060 ACTGTTCGTGCCGATTTCTAATA 58.249 39.130 0.00 0.00 35.23 0.98
118 119 3.596214 ACTGTTCGTGCCGATTTCTAAT 58.404 40.909 0.00 0.00 35.23 1.73
119 120 3.034721 ACTGTTCGTGCCGATTTCTAA 57.965 42.857 0.00 0.00 35.23 2.10
120 121 2.736144 ACTGTTCGTGCCGATTTCTA 57.264 45.000 0.00 0.00 35.23 2.10
121 122 2.736144 TACTGTTCGTGCCGATTTCT 57.264 45.000 0.00 0.00 35.23 2.52
122 123 5.919141 ACTATATACTGTTCGTGCCGATTTC 59.081 40.000 0.00 0.00 35.23 2.17
123 124 5.839621 ACTATATACTGTTCGTGCCGATTT 58.160 37.500 0.00 0.00 35.23 2.17
124 125 5.449107 ACTATATACTGTTCGTGCCGATT 57.551 39.130 0.00 0.00 35.23 3.34
125 126 5.449107 AACTATATACTGTTCGTGCCGAT 57.551 39.130 0.00 0.00 35.23 4.18
126 127 4.261322 GGAACTATATACTGTTCGTGCCGA 60.261 45.833 11.28 0.00 42.28 5.54
127 128 3.979495 GGAACTATATACTGTTCGTGCCG 59.021 47.826 11.28 0.00 42.28 5.69
128 129 4.940463 TGGAACTATATACTGTTCGTGCC 58.060 43.478 11.28 0.00 42.28 5.01
129 130 5.808540 TGTTGGAACTATATACTGTTCGTGC 59.191 40.000 11.28 6.43 42.28 5.34
130 131 7.009265 CACTGTTGGAACTATATACTGTTCGTG 59.991 40.741 11.28 9.83 42.28 4.35
131 132 7.033791 CACTGTTGGAACTATATACTGTTCGT 58.966 38.462 11.28 3.89 42.28 3.85
132 133 6.019801 GCACTGTTGGAACTATATACTGTTCG 60.020 42.308 11.28 3.45 42.28 3.95
133 134 6.258068 GGCACTGTTGGAACTATATACTGTTC 59.742 42.308 9.83 9.83 41.08 3.18
134 135 6.113411 GGCACTGTTGGAACTATATACTGTT 58.887 40.000 0.00 0.00 0.00 3.16
135 136 5.396436 GGGCACTGTTGGAACTATATACTGT 60.396 44.000 0.00 0.00 0.00 3.55
136 137 5.057149 GGGCACTGTTGGAACTATATACTG 58.943 45.833 0.00 0.00 0.00 2.74
137 138 4.102681 GGGGCACTGTTGGAACTATATACT 59.897 45.833 0.00 0.00 0.00 2.12
138 139 4.102681 AGGGGCACTGTTGGAACTATATAC 59.897 45.833 0.00 0.00 0.00 1.47
139 140 4.102524 CAGGGGCACTGTTGGAACTATATA 59.897 45.833 9.07 0.00 42.42 0.86
140 141 3.117888 CAGGGGCACTGTTGGAACTATAT 60.118 47.826 9.07 0.00 42.42 0.86
141 142 2.238646 CAGGGGCACTGTTGGAACTATA 59.761 50.000 9.07 0.00 42.42 1.31
142 143 1.004745 CAGGGGCACTGTTGGAACTAT 59.995 52.381 9.07 0.00 42.42 2.12
143 144 0.400213 CAGGGGCACTGTTGGAACTA 59.600 55.000 9.07 0.00 42.42 2.24
144 145 1.151450 CAGGGGCACTGTTGGAACT 59.849 57.895 9.07 0.00 42.42 3.01
145 146 3.763671 CAGGGGCACTGTTGGAAC 58.236 61.111 9.07 0.00 42.42 3.62
159 160 4.020128 GGCTCAACTAACCCCTATATCAGG 60.020 50.000 0.00 0.00 45.07 3.86
160 161 4.020128 GGGCTCAACTAACCCCTATATCAG 60.020 50.000 0.00 0.00 37.70 2.90
161 162 3.908103 GGGCTCAACTAACCCCTATATCA 59.092 47.826 0.00 0.00 37.70 2.15
162 163 3.056035 CGGGCTCAACTAACCCCTATATC 60.056 52.174 0.00 0.00 40.86 1.63
163 164 2.904434 CGGGCTCAACTAACCCCTATAT 59.096 50.000 0.00 0.00 40.86 0.86
164 165 2.091166 TCGGGCTCAACTAACCCCTATA 60.091 50.000 0.00 0.00 40.86 1.31
165 166 1.129058 CGGGCTCAACTAACCCCTAT 58.871 55.000 0.00 0.00 40.86 2.57
166 167 0.041535 TCGGGCTCAACTAACCCCTA 59.958 55.000 0.00 0.00 40.86 3.53
167 168 0.838987 TTCGGGCTCAACTAACCCCT 60.839 55.000 0.00 0.00 40.86 4.79
168 169 0.037160 TTTCGGGCTCAACTAACCCC 59.963 55.000 0.00 0.00 40.86 4.95
169 170 1.162698 GTTTCGGGCTCAACTAACCC 58.837 55.000 0.00 0.00 40.51 4.11
170 171 1.886886 TGTTTCGGGCTCAACTAACC 58.113 50.000 0.00 0.00 0.00 2.85
171 172 2.876550 ACTTGTTTCGGGCTCAACTAAC 59.123 45.455 0.00 0.00 0.00 2.34
172 173 3.202829 ACTTGTTTCGGGCTCAACTAA 57.797 42.857 0.00 0.00 0.00 2.24
173 174 2.922740 ACTTGTTTCGGGCTCAACTA 57.077 45.000 0.00 0.00 0.00 2.24
174 175 1.947456 GAACTTGTTTCGGGCTCAACT 59.053 47.619 0.00 0.00 0.00 3.16
175 176 1.673920 TGAACTTGTTTCGGGCTCAAC 59.326 47.619 0.00 0.00 36.97 3.18
176 177 2.045561 TGAACTTGTTTCGGGCTCAA 57.954 45.000 0.00 0.00 36.97 3.02
177 178 2.045561 TTGAACTTGTTTCGGGCTCA 57.954 45.000 0.00 0.00 36.97 4.26
178 179 3.308530 CATTTGAACTTGTTTCGGGCTC 58.691 45.455 0.00 0.00 36.97 4.70
179 180 2.035832 CCATTTGAACTTGTTTCGGGCT 59.964 45.455 0.00 0.00 36.97 5.19
180 181 2.035321 TCCATTTGAACTTGTTTCGGGC 59.965 45.455 0.00 0.00 36.97 6.13
181 182 3.067461 TGTCCATTTGAACTTGTTTCGGG 59.933 43.478 0.00 0.00 36.97 5.14
182 183 4.300189 TGTCCATTTGAACTTGTTTCGG 57.700 40.909 0.00 0.00 36.97 4.30
183 184 5.229887 CACTTGTCCATTTGAACTTGTTTCG 59.770 40.000 0.00 0.00 36.97 3.46
184 185 6.329496 TCACTTGTCCATTTGAACTTGTTTC 58.671 36.000 0.00 0.00 34.41 2.78
185 186 6.071391 ACTCACTTGTCCATTTGAACTTGTTT 60.071 34.615 0.00 0.00 0.00 2.83
186 187 5.418840 ACTCACTTGTCCATTTGAACTTGTT 59.581 36.000 0.00 0.00 0.00 2.83
187 188 4.949856 ACTCACTTGTCCATTTGAACTTGT 59.050 37.500 0.00 0.00 0.00 3.16
188 189 5.505173 ACTCACTTGTCCATTTGAACTTG 57.495 39.130 0.00 0.00 0.00 3.16
189 190 7.639113 TTTACTCACTTGTCCATTTGAACTT 57.361 32.000 0.00 0.00 0.00 2.66
190 191 7.416326 GGTTTTACTCACTTGTCCATTTGAACT 60.416 37.037 0.00 0.00 0.00 3.01
191 192 6.695713 GGTTTTACTCACTTGTCCATTTGAAC 59.304 38.462 0.00 0.00 0.00 3.18
192 193 6.378564 TGGTTTTACTCACTTGTCCATTTGAA 59.621 34.615 0.00 0.00 0.00 2.69
193 194 5.888724 TGGTTTTACTCACTTGTCCATTTGA 59.111 36.000 0.00 0.00 0.00 2.69
194 195 6.142818 TGGTTTTACTCACTTGTCCATTTG 57.857 37.500 0.00 0.00 0.00 2.32
195 196 6.153680 TGTTGGTTTTACTCACTTGTCCATTT 59.846 34.615 0.00 0.00 0.00 2.32
196 197 5.654650 TGTTGGTTTTACTCACTTGTCCATT 59.345 36.000 0.00 0.00 0.00 3.16
197 198 5.197451 TGTTGGTTTTACTCACTTGTCCAT 58.803 37.500 0.00 0.00 0.00 3.41
198 199 4.590918 TGTTGGTTTTACTCACTTGTCCA 58.409 39.130 0.00 0.00 0.00 4.02
199 200 4.638865 ACTGTTGGTTTTACTCACTTGTCC 59.361 41.667 0.00 0.00 0.00 4.02
200 201 5.813080 ACTGTTGGTTTTACTCACTTGTC 57.187 39.130 0.00 0.00 0.00 3.18
201 202 6.584185 AAACTGTTGGTTTTACTCACTTGT 57.416 33.333 0.00 0.00 44.77 3.16
202 203 7.193595 CCTAAACTGTTGGTTTTACTCACTTG 58.806 38.462 0.00 0.00 44.77 3.16
203 204 6.320418 CCCTAAACTGTTGGTTTTACTCACTT 59.680 38.462 0.00 0.00 44.77 3.16
204 205 5.826208 CCCTAAACTGTTGGTTTTACTCACT 59.174 40.000 0.00 0.00 44.77 3.41
205 206 5.009310 CCCCTAAACTGTTGGTTTTACTCAC 59.991 44.000 0.00 0.00 44.77 3.51
206 207 5.134661 CCCCTAAACTGTTGGTTTTACTCA 58.865 41.667 0.00 0.00 44.77 3.41
207 208 4.022589 GCCCCTAAACTGTTGGTTTTACTC 60.023 45.833 0.00 0.00 44.77 2.59
208 209 3.893200 GCCCCTAAACTGTTGGTTTTACT 59.107 43.478 0.00 0.00 44.77 2.24
209 210 3.637694 TGCCCCTAAACTGTTGGTTTTAC 59.362 43.478 0.00 0.00 44.77 2.01
210 211 3.912248 TGCCCCTAAACTGTTGGTTTTA 58.088 40.909 0.00 0.00 44.77 1.52
211 212 2.753247 TGCCCCTAAACTGTTGGTTTT 58.247 42.857 0.00 0.00 44.77 2.43
213 214 2.694616 ATGCCCCTAAACTGTTGGTT 57.305 45.000 0.00 0.00 40.28 3.67
214 215 3.075432 AGTTATGCCCCTAAACTGTTGGT 59.925 43.478 0.00 0.00 32.38 3.67
215 216 3.443681 CAGTTATGCCCCTAAACTGTTGG 59.556 47.826 6.33 0.00 43.20 3.77
216 217 3.443681 CCAGTTATGCCCCTAAACTGTTG 59.556 47.826 12.05 0.00 45.51 3.33
217 218 3.332485 TCCAGTTATGCCCCTAAACTGTT 59.668 43.478 12.05 0.00 45.51 3.16
218 219 2.916934 TCCAGTTATGCCCCTAAACTGT 59.083 45.455 12.05 0.00 45.51 3.55
219 220 3.644966 TCCAGTTATGCCCCTAAACTG 57.355 47.619 7.32 7.32 46.18 3.16
220 221 4.881157 AATCCAGTTATGCCCCTAAACT 57.119 40.909 0.00 0.00 33.82 2.66
221 222 5.932619 AAAATCCAGTTATGCCCCTAAAC 57.067 39.130 0.00 0.00 0.00 2.01
260 261 9.533831 GGGGTCCTTAATTTATTGATGACATAT 57.466 33.333 0.00 0.00 0.00 1.78
261 262 7.663905 CGGGGTCCTTAATTTATTGATGACATA 59.336 37.037 0.00 0.00 0.00 2.29
262 263 6.490040 CGGGGTCCTTAATTTATTGATGACAT 59.510 38.462 0.00 0.00 0.00 3.06
263 264 5.825679 CGGGGTCCTTAATTTATTGATGACA 59.174 40.000 5.50 0.00 0.00 3.58
264 265 6.059484 TCGGGGTCCTTAATTTATTGATGAC 58.941 40.000 0.00 0.00 0.00 3.06
265 266 6.255294 TCGGGGTCCTTAATTTATTGATGA 57.745 37.500 0.00 0.00 0.00 2.92
266 267 8.630054 TTATCGGGGTCCTTAATTTATTGATG 57.370 34.615 0.00 0.00 0.00 3.07
267 268 9.649316 TTTTATCGGGGTCCTTAATTTATTGAT 57.351 29.630 0.00 0.00 0.00 2.57
268 269 9.649316 ATTTTATCGGGGTCCTTAATTTATTGA 57.351 29.630 0.00 0.00 0.00 2.57
269 270 9.908152 GATTTTATCGGGGTCCTTAATTTATTG 57.092 33.333 0.00 0.00 0.00 1.90
270 271 9.085645 GGATTTTATCGGGGTCCTTAATTTATT 57.914 33.333 0.00 0.00 0.00 1.40
271 272 7.392393 CGGATTTTATCGGGGTCCTTAATTTAT 59.608 37.037 0.00 0.00 0.00 1.40
272 273 6.711645 CGGATTTTATCGGGGTCCTTAATTTA 59.288 38.462 0.00 0.00 0.00 1.40
273 274 5.533528 CGGATTTTATCGGGGTCCTTAATTT 59.466 40.000 0.00 0.00 0.00 1.82
274 275 5.067954 CGGATTTTATCGGGGTCCTTAATT 58.932 41.667 0.00 0.00 0.00 1.40
275 276 4.348754 TCGGATTTTATCGGGGTCCTTAAT 59.651 41.667 0.00 0.00 0.00 1.40
276 277 3.710677 TCGGATTTTATCGGGGTCCTTAA 59.289 43.478 0.00 0.00 0.00 1.85
277 278 3.307506 TCGGATTTTATCGGGGTCCTTA 58.692 45.455 0.00 0.00 0.00 2.69
278 279 2.121129 TCGGATTTTATCGGGGTCCTT 58.879 47.619 0.00 0.00 0.00 3.36
279 280 1.797320 TCGGATTTTATCGGGGTCCT 58.203 50.000 0.00 0.00 0.00 3.85
280 281 2.216046 GTTCGGATTTTATCGGGGTCC 58.784 52.381 0.00 0.00 0.00 4.46
281 282 1.862827 CGTTCGGATTTTATCGGGGTC 59.137 52.381 0.00 0.00 0.00 4.46
282 283 1.207811 ACGTTCGGATTTTATCGGGGT 59.792 47.619 0.00 0.00 0.00 4.95
283 284 1.944032 ACGTTCGGATTTTATCGGGG 58.056 50.000 0.00 0.00 0.00 5.73
284 285 2.034339 CGAACGTTCGGATTTTATCGGG 60.034 50.000 36.53 9.39 46.30 5.14
285 286 3.214699 CGAACGTTCGGATTTTATCGG 57.785 47.619 36.53 9.59 46.30 4.18
297 298 7.769719 TGAAATGCTTAAAATACGAACGTTC 57.230 32.000 18.47 18.47 0.00 3.95
298 299 7.483691 GGATGAAATGCTTAAAATACGAACGTT 59.516 33.333 0.00 0.00 0.00 3.99
299 300 6.964934 GGATGAAATGCTTAAAATACGAACGT 59.035 34.615 5.03 5.03 0.00 3.99
300 301 6.413818 GGGATGAAATGCTTAAAATACGAACG 59.586 38.462 0.00 0.00 33.81 3.95
301 302 6.413818 CGGGATGAAATGCTTAAAATACGAAC 59.586 38.462 0.00 0.00 33.81 3.95
302 303 6.316640 TCGGGATGAAATGCTTAAAATACGAA 59.683 34.615 0.00 0.00 33.81 3.85
303 304 5.818336 TCGGGATGAAATGCTTAAAATACGA 59.182 36.000 0.00 0.00 33.81 3.43
304 305 6.055231 TCGGGATGAAATGCTTAAAATACG 57.945 37.500 0.00 0.00 33.81 3.06
305 306 6.413818 CGTTCGGGATGAAATGCTTAAAATAC 59.586 38.462 0.00 0.00 38.60 1.89
306 307 6.094325 ACGTTCGGGATGAAATGCTTAAAATA 59.906 34.615 0.00 0.00 38.60 1.40
307 308 5.105917 ACGTTCGGGATGAAATGCTTAAAAT 60.106 36.000 0.00 0.00 38.60 1.82
308 309 4.216687 ACGTTCGGGATGAAATGCTTAAAA 59.783 37.500 0.00 0.00 38.60 1.52
309 310 3.754323 ACGTTCGGGATGAAATGCTTAAA 59.246 39.130 0.00 0.00 38.60 1.52
310 311 3.340034 ACGTTCGGGATGAAATGCTTAA 58.660 40.909 0.00 0.00 38.60 1.85
311 312 2.980568 ACGTTCGGGATGAAATGCTTA 58.019 42.857 0.00 0.00 38.60 3.09
312 313 1.821216 ACGTTCGGGATGAAATGCTT 58.179 45.000 0.00 0.00 38.60 3.91
313 314 1.821216 AACGTTCGGGATGAAATGCT 58.179 45.000 0.00 0.00 38.60 3.79
314 315 2.629639 AAACGTTCGGGATGAAATGC 57.370 45.000 0.00 0.00 38.60 3.56
315 316 5.453648 TGTAAAAACGTTCGGGATGAAATG 58.546 37.500 0.00 0.00 38.60 2.32
316 317 5.692613 TGTAAAAACGTTCGGGATGAAAT 57.307 34.783 0.00 0.00 38.60 2.17
317 318 5.453648 CATGTAAAAACGTTCGGGATGAAA 58.546 37.500 0.00 0.00 38.60 2.69
318 319 4.083217 CCATGTAAAAACGTTCGGGATGAA 60.083 41.667 0.00 0.00 0.00 2.57
319 320 3.437395 CCATGTAAAAACGTTCGGGATGA 59.563 43.478 0.00 0.00 0.00 2.92
320 321 3.753842 CCATGTAAAAACGTTCGGGATG 58.246 45.455 0.00 1.01 0.00 3.51
321 322 2.162809 GCCATGTAAAAACGTTCGGGAT 59.837 45.455 0.00 0.00 0.00 3.85
322 323 1.536331 GCCATGTAAAAACGTTCGGGA 59.464 47.619 0.00 0.00 0.00 5.14
323 324 1.267261 TGCCATGTAAAAACGTTCGGG 59.733 47.619 0.00 0.00 0.00 5.14
324 325 2.690173 TGCCATGTAAAAACGTTCGG 57.310 45.000 0.00 0.00 0.00 4.30
325 326 3.623863 AGTTGCCATGTAAAAACGTTCG 58.376 40.909 0.00 0.00 0.00 3.95
326 327 5.959652 AAAGTTGCCATGTAAAAACGTTC 57.040 34.783 0.00 0.00 0.00 3.95
327 328 6.566141 ACTAAAGTTGCCATGTAAAAACGTT 58.434 32.000 0.00 0.00 0.00 3.99
328 329 6.139048 ACTAAAGTTGCCATGTAAAAACGT 57.861 33.333 0.00 0.00 0.00 3.99
343 344 3.463944 CCACCTCACGTCAACTAAAGTT 58.536 45.455 0.00 0.00 39.12 2.66
344 345 2.805657 GCCACCTCACGTCAACTAAAGT 60.806 50.000 0.00 0.00 0.00 2.66
345 346 1.798813 GCCACCTCACGTCAACTAAAG 59.201 52.381 0.00 0.00 0.00 1.85
346 347 1.139256 TGCCACCTCACGTCAACTAAA 59.861 47.619 0.00 0.00 0.00 1.85
347 348 0.753867 TGCCACCTCACGTCAACTAA 59.246 50.000 0.00 0.00 0.00 2.24
348 349 0.753867 TTGCCACCTCACGTCAACTA 59.246 50.000 0.00 0.00 0.00 2.24
349 350 0.108585 ATTGCCACCTCACGTCAACT 59.891 50.000 0.00 0.00 0.00 3.16
350 351 0.951558 AATTGCCACCTCACGTCAAC 59.048 50.000 0.00 0.00 0.00 3.18
351 352 1.686355 AAATTGCCACCTCACGTCAA 58.314 45.000 0.00 0.00 0.00 3.18
352 353 1.686355 AAAATTGCCACCTCACGTCA 58.314 45.000 0.00 0.00 0.00 4.35
353 354 2.812011 ACTAAAATTGCCACCTCACGTC 59.188 45.455 0.00 0.00 0.00 4.34
354 355 2.858745 ACTAAAATTGCCACCTCACGT 58.141 42.857 0.00 0.00 0.00 4.49
355 356 3.004315 ACAACTAAAATTGCCACCTCACG 59.996 43.478 0.00 0.00 32.47 4.35
356 357 4.584327 ACAACTAAAATTGCCACCTCAC 57.416 40.909 0.00 0.00 32.47 3.51
357 358 6.716934 TTAACAACTAAAATTGCCACCTCA 57.283 33.333 0.00 0.00 32.47 3.86
358 359 5.633601 GCTTAACAACTAAAATTGCCACCTC 59.366 40.000 0.00 0.00 32.47 3.85
359 360 5.510690 GGCTTAACAACTAAAATTGCCACCT 60.511 40.000 0.00 0.00 37.91 4.00
360 361 4.688879 GGCTTAACAACTAAAATTGCCACC 59.311 41.667 0.00 0.00 37.91 4.61
361 362 5.293560 TGGCTTAACAACTAAAATTGCCAC 58.706 37.500 0.00 0.00 42.20 5.01
362 363 5.537300 TGGCTTAACAACTAAAATTGCCA 57.463 34.783 0.00 0.00 44.41 4.92
363 364 5.351189 CCATGGCTTAACAACTAAAATTGCC 59.649 40.000 0.00 0.00 38.42 4.52
364 365 5.163864 GCCATGGCTTAACAACTAAAATTGC 60.164 40.000 29.98 0.00 38.26 3.56
365 366 5.931146 TGCCATGGCTTAACAACTAAAATTG 59.069 36.000 35.53 0.00 42.51 2.32
366 367 6.107901 TGCCATGGCTTAACAACTAAAATT 57.892 33.333 35.53 0.00 42.51 1.82
367 368 5.736951 TGCCATGGCTTAACAACTAAAAT 57.263 34.783 35.53 0.00 42.51 1.82
368 369 5.069781 AGTTGCCATGGCTTAACAACTAAAA 59.930 36.000 35.53 15.30 46.66 1.52
369 370 4.586841 AGTTGCCATGGCTTAACAACTAAA 59.413 37.500 35.53 15.82 46.66 1.85
370 371 4.148838 AGTTGCCATGGCTTAACAACTAA 58.851 39.130 35.53 16.56 46.66 2.24
371 372 3.761897 AGTTGCCATGGCTTAACAACTA 58.238 40.909 35.53 11.01 46.66 2.24
372 373 2.597455 AGTTGCCATGGCTTAACAACT 58.403 42.857 35.53 30.08 44.47 3.16
373 374 3.385193 AAGTTGCCATGGCTTAACAAC 57.615 42.857 35.53 28.51 42.51 3.32
374 375 3.133721 ACAAAGTTGCCATGGCTTAACAA 59.866 39.130 35.53 19.54 42.51 2.83
375 376 2.697751 ACAAAGTTGCCATGGCTTAACA 59.302 40.909 35.53 14.23 42.51 2.41
376 377 3.385193 ACAAAGTTGCCATGGCTTAAC 57.615 42.857 35.53 29.86 42.51 2.01
377 378 3.244044 GGAACAAAGTTGCCATGGCTTAA 60.244 43.478 35.53 21.06 42.51 1.85
378 379 2.298729 GGAACAAAGTTGCCATGGCTTA 59.701 45.455 35.53 21.59 42.51 3.09
379 380 1.070601 GGAACAAAGTTGCCATGGCTT 59.929 47.619 35.53 20.56 42.51 4.35
380 381 0.681175 GGAACAAAGTTGCCATGGCT 59.319 50.000 35.53 15.05 42.51 4.75
381 382 0.392336 TGGAACAAAGTTGCCATGGC 59.608 50.000 30.54 30.54 37.15 4.40
408 409 9.766277 GTAAACATTGCAATTTTCTGACAAAAA 57.234 25.926 9.83 0.00 32.99 1.94
409 410 8.394121 GGTAAACATTGCAATTTTCTGACAAAA 58.606 29.630 9.83 0.00 0.00 2.44
410 411 7.550551 TGGTAAACATTGCAATTTTCTGACAAA 59.449 29.630 9.83 0.25 0.00 2.83
411 412 7.044181 TGGTAAACATTGCAATTTTCTGACAA 58.956 30.769 9.83 0.59 0.00 3.18
412 413 6.577103 TGGTAAACATTGCAATTTTCTGACA 58.423 32.000 9.83 5.22 0.00 3.58
413 414 7.344441 GTTGGTAAACATTGCAATTTTCTGAC 58.656 34.615 9.83 8.90 36.24 3.51
414 415 6.481644 GGTTGGTAAACATTGCAATTTTCTGA 59.518 34.615 9.83 0.00 38.10 3.27
415 416 6.482973 AGGTTGGTAAACATTGCAATTTTCTG 59.517 34.615 9.83 1.85 38.10 3.02
416 417 6.591001 AGGTTGGTAAACATTGCAATTTTCT 58.409 32.000 9.83 4.06 38.10 2.52
417 418 6.481644 TGAGGTTGGTAAACATTGCAATTTTC 59.518 34.615 9.83 1.45 38.10 2.29
418 419 6.259829 GTGAGGTTGGTAAACATTGCAATTTT 59.740 34.615 9.83 15.06 38.10 1.82
419 420 5.757808 GTGAGGTTGGTAAACATTGCAATTT 59.242 36.000 9.83 6.22 38.10 1.82
420 421 5.296748 GTGAGGTTGGTAAACATTGCAATT 58.703 37.500 9.83 0.00 38.10 2.32
421 422 4.558496 CGTGAGGTTGGTAAACATTGCAAT 60.558 41.667 5.99 5.99 38.10 3.56
422 423 3.243234 CGTGAGGTTGGTAAACATTGCAA 60.243 43.478 0.00 0.00 38.10 4.08
423 424 2.292016 CGTGAGGTTGGTAAACATTGCA 59.708 45.455 0.00 0.00 38.10 4.08
424 425 2.920647 GCGTGAGGTTGGTAAACATTGC 60.921 50.000 0.00 0.00 38.10 3.56
425 426 2.664424 CGCGTGAGGTTGGTAAACATTG 60.664 50.000 0.00 0.00 38.10 2.82
426 427 1.533731 CGCGTGAGGTTGGTAAACATT 59.466 47.619 0.00 0.00 38.10 2.71
427 428 1.153353 CGCGTGAGGTTGGTAAACAT 58.847 50.000 0.00 0.00 38.10 2.71
428 429 0.104487 TCGCGTGAGGTTGGTAAACA 59.896 50.000 5.77 0.00 38.10 2.83
429 430 1.070376 GTTCGCGTGAGGTTGGTAAAC 60.070 52.381 5.77 0.00 35.40 2.01
430 431 1.202557 AGTTCGCGTGAGGTTGGTAAA 60.203 47.619 5.77 0.00 0.00 2.01
431 432 0.390124 AGTTCGCGTGAGGTTGGTAA 59.610 50.000 5.77 0.00 0.00 2.85
432 433 1.246649 TAGTTCGCGTGAGGTTGGTA 58.753 50.000 5.77 0.00 0.00 3.25
433 434 0.390124 TTAGTTCGCGTGAGGTTGGT 59.610 50.000 5.77 0.00 0.00 3.67
434 435 1.459592 CTTTAGTTCGCGTGAGGTTGG 59.540 52.381 5.77 0.00 0.00 3.77
435 436 2.132762 ACTTTAGTTCGCGTGAGGTTG 58.867 47.619 5.77 0.00 0.00 3.77
436 437 2.521105 ACTTTAGTTCGCGTGAGGTT 57.479 45.000 5.77 0.00 0.00 3.50
437 438 2.132762 CAACTTTAGTTCGCGTGAGGT 58.867 47.619 5.77 0.00 35.83 3.85
438 439 1.136336 GCAACTTTAGTTCGCGTGAGG 60.136 52.381 5.77 0.00 35.83 3.86
439 440 1.136336 GGCAACTTTAGTTCGCGTGAG 60.136 52.381 5.77 0.00 35.83 3.51
440 441 0.863144 GGCAACTTTAGTTCGCGTGA 59.137 50.000 5.77 0.00 35.83 4.35
441 442 0.584396 TGGCAACTTTAGTTCGCGTG 59.416 50.000 5.77 0.00 35.83 5.34
442 443 1.196808 CATGGCAACTTTAGTTCGCGT 59.803 47.619 5.77 0.00 35.83 6.01
443 444 1.463056 TCATGGCAACTTTAGTTCGCG 59.537 47.619 0.00 0.00 35.83 5.87
444 445 3.552604 TTCATGGCAACTTTAGTTCGC 57.447 42.857 0.00 1.19 35.83 4.70
445 446 5.108405 CGTTTTTCATGGCAACTTTAGTTCG 60.108 40.000 0.00 0.00 35.83 3.95
446 447 5.746721 ACGTTTTTCATGGCAACTTTAGTTC 59.253 36.000 0.00 0.00 35.83 3.01
447 448 5.656480 ACGTTTTTCATGGCAACTTTAGTT 58.344 33.333 0.00 0.00 39.12 2.24
448 449 5.257082 ACGTTTTTCATGGCAACTTTAGT 57.743 34.783 0.00 0.00 37.61 2.24
449 450 5.108405 CGAACGTTTTTCATGGCAACTTTAG 60.108 40.000 0.46 0.00 37.61 1.85
450 451 4.735822 CGAACGTTTTTCATGGCAACTTTA 59.264 37.500 0.46 0.00 37.61 1.85
451 452 3.549873 CGAACGTTTTTCATGGCAACTTT 59.450 39.130 0.46 0.00 37.61 2.66
452 453 3.112580 CGAACGTTTTTCATGGCAACTT 58.887 40.909 0.46 0.00 37.61 2.66
453 454 2.542824 CCGAACGTTTTTCATGGCAACT 60.543 45.455 0.46 0.00 37.61 3.16
454 455 1.784283 CCGAACGTTTTTCATGGCAAC 59.216 47.619 0.46 0.00 0.00 4.17
455 456 1.269309 CCCGAACGTTTTTCATGGCAA 60.269 47.619 0.46 0.00 0.00 4.52
456 457 0.312416 CCCGAACGTTTTTCATGGCA 59.688 50.000 0.46 0.00 0.00 4.92
457 458 0.312729 ACCCGAACGTTTTTCATGGC 59.687 50.000 0.46 0.00 0.00 4.40
458 459 1.068816 GGACCCGAACGTTTTTCATGG 60.069 52.381 0.46 0.00 0.00 3.66
459 460 1.068816 GGGACCCGAACGTTTTTCATG 60.069 52.381 0.46 0.00 0.00 3.07
460 461 1.241165 GGGACCCGAACGTTTTTCAT 58.759 50.000 0.46 0.00 0.00 2.57
461 462 2.705371 GGGACCCGAACGTTTTTCA 58.295 52.632 0.46 0.00 0.00 2.69
468 469 7.218086 GATTTTAATCATGGGGACCCGAACG 62.218 48.000 3.87 0.00 41.03 3.95
469 470 4.037565 GATTTTAATCATGGGGACCCGAAC 59.962 45.833 3.87 0.00 41.03 3.95
470 471 4.211920 GATTTTAATCATGGGGACCCGAA 58.788 43.478 3.87 0.00 41.03 4.30
471 472 3.435890 GGATTTTAATCATGGGGACCCGA 60.436 47.826 3.87 0.00 42.45 5.14
472 473 2.890945 GGATTTTAATCATGGGGACCCG 59.109 50.000 3.87 0.00 42.45 5.28
473 474 2.890945 CGGATTTTAATCATGGGGACCC 59.109 50.000 0.03 0.03 42.45 4.46
474 475 3.827722 TCGGATTTTAATCATGGGGACC 58.172 45.455 4.97 0.00 43.09 4.46
475 476 4.261031 CGTTCGGATTTTAATCATGGGGAC 60.261 45.833 4.97 0.00 37.15 4.46
476 477 3.880490 CGTTCGGATTTTAATCATGGGGA 59.120 43.478 4.97 0.00 37.15 4.81
477 478 3.630312 ACGTTCGGATTTTAATCATGGGG 59.370 43.478 4.97 0.00 37.15 4.96
478 479 4.893424 ACGTTCGGATTTTAATCATGGG 57.107 40.909 4.97 0.00 37.15 4.00
479 480 5.874831 TGAACGTTCGGATTTTAATCATGG 58.125 37.500 22.48 0.00 37.15 3.66
480 481 5.965334 CCTGAACGTTCGGATTTTAATCATG 59.035 40.000 33.55 11.96 37.15 3.07
481 482 5.878116 TCCTGAACGTTCGGATTTTAATCAT 59.122 36.000 33.55 0.00 37.15 2.45
482 483 5.239351 TCCTGAACGTTCGGATTTTAATCA 58.761 37.500 33.55 8.23 37.15 2.57
483 484 5.789710 TCCTGAACGTTCGGATTTTAATC 57.210 39.130 33.55 3.61 35.56 1.75
484 485 6.753107 AATCCTGAACGTTCGGATTTTAAT 57.247 33.333 35.46 24.92 42.38 1.40
485 486 6.563222 AAATCCTGAACGTTCGGATTTTAA 57.437 33.333 38.86 23.40 46.16 1.52
486 487 7.549842 TGATAAATCCTGAACGTTCGGATTTTA 59.450 33.333 42.77 35.76 46.16 1.52
487 488 6.373216 TGATAAATCCTGAACGTTCGGATTTT 59.627 34.615 42.77 35.82 46.16 1.82
489 490 5.424757 TGATAAATCCTGAACGTTCGGATT 58.575 37.500 35.46 35.46 44.51 3.01
490 491 5.018539 TGATAAATCCTGAACGTTCGGAT 57.981 39.130 33.55 32.22 40.07 4.18
491 492 4.459390 TGATAAATCCTGAACGTTCGGA 57.541 40.909 33.55 31.64 35.56 4.55
492 493 5.501715 CAATGATAAATCCTGAACGTTCGG 58.498 41.667 26.94 26.94 0.00 4.30
493 494 4.963953 GCAATGATAAATCCTGAACGTTCG 59.036 41.667 22.48 16.45 0.00 3.95
494 495 5.163663 TGGCAATGATAAATCCTGAACGTTC 60.164 40.000 21.42 21.42 0.00 3.95
495 496 4.704540 TGGCAATGATAAATCCTGAACGTT 59.295 37.500 0.00 0.00 0.00 3.99
496 497 4.269183 TGGCAATGATAAATCCTGAACGT 58.731 39.130 0.00 0.00 0.00 3.99
497 498 4.898829 TGGCAATGATAAATCCTGAACG 57.101 40.909 0.00 0.00 0.00 3.95
498 499 9.768662 AATTTATGGCAATGATAAATCCTGAAC 57.231 29.630 4.73 0.00 35.74 3.18
567 568 6.800072 AATGATCTAGGGGTAGCTTATAGC 57.200 41.667 0.00 0.00 42.84 2.97
572 573 9.567702 AGATTTATAATGATCTAGGGGTAGCTT 57.432 33.333 0.00 0.00 31.09 3.74
594 595 9.817809 TCTCTAGAATTAAACGCACAATAGATT 57.182 29.630 0.00 0.00 0.00 2.40
595 596 9.817809 TTCTCTAGAATTAAACGCACAATAGAT 57.182 29.630 0.00 0.00 0.00 1.98
596 597 9.647797 TTTCTCTAGAATTAAACGCACAATAGA 57.352 29.630 0.00 0.00 33.54 1.98
599 600 8.564574 TGTTTTCTCTAGAATTAAACGCACAAT 58.435 29.630 14.36 0.00 33.54 2.71
600 601 7.921787 TGTTTTCTCTAGAATTAAACGCACAA 58.078 30.769 14.36 1.21 33.54 3.33
601 602 7.485418 TGTTTTCTCTAGAATTAAACGCACA 57.515 32.000 14.36 6.64 33.54 4.57
602 603 7.853929 TGTTGTTTTCTCTAGAATTAAACGCAC 59.146 33.333 14.36 13.64 33.54 5.34
603 604 7.921787 TGTTGTTTTCTCTAGAATTAAACGCA 58.078 30.769 14.36 13.11 33.54 5.24
604 605 8.950403 ATGTTGTTTTCTCTAGAATTAAACGC 57.050 30.769 14.36 11.60 33.54 4.84
609 610 9.219603 CCAGTGATGTTGTTTTCTCTAGAATTA 57.780 33.333 0.00 0.00 33.54 1.40
610 611 7.721399 ACCAGTGATGTTGTTTTCTCTAGAATT 59.279 33.333 0.00 0.00 33.54 2.17
611 612 7.227156 ACCAGTGATGTTGTTTTCTCTAGAAT 58.773 34.615 0.00 0.00 33.54 2.40
612 613 6.591935 ACCAGTGATGTTGTTTTCTCTAGAA 58.408 36.000 0.00 0.00 0.00 2.10
613 614 6.174720 ACCAGTGATGTTGTTTTCTCTAGA 57.825 37.500 0.00 0.00 0.00 2.43
614 615 6.867662 AACCAGTGATGTTGTTTTCTCTAG 57.132 37.500 0.00 0.00 0.00 2.43
615 616 7.479980 CAAAACCAGTGATGTTGTTTTCTCTA 58.520 34.615 4.74 0.00 38.47 2.43
616 617 6.332630 CAAAACCAGTGATGTTGTTTTCTCT 58.667 36.000 4.74 0.00 38.47 3.10
617 618 5.005682 GCAAAACCAGTGATGTTGTTTTCTC 59.994 40.000 4.74 0.00 38.47 2.87
618 619 4.869861 GCAAAACCAGTGATGTTGTTTTCT 59.130 37.500 4.74 0.00 38.47 2.52
619 620 4.629200 TGCAAAACCAGTGATGTTGTTTTC 59.371 37.500 4.74 2.71 38.47 2.29
620 621 4.573900 TGCAAAACCAGTGATGTTGTTTT 58.426 34.783 0.00 0.00 40.47 2.43
684 685 3.118956 AGAGAGAATGGTGGCGAGTTAAG 60.119 47.826 0.00 0.00 0.00 1.85
717 718 1.259840 CCAGGGTGGCCAAAATGGAG 61.260 60.000 21.45 3.64 40.96 3.86
859 865 0.110486 TCCTCACCTTGTTGCCTTCC 59.890 55.000 0.00 0.00 0.00 3.46
967 976 2.680352 GGTGGACCGGAGCTCAGA 60.680 66.667 17.19 0.00 0.00 3.27
1056 1065 3.484806 AGCACCGTCACCACCCAA 61.485 61.111 0.00 0.00 0.00 4.12
1289 1315 7.490657 ACATCACAATGGTTACCTACTCTTA 57.509 36.000 2.07 0.00 37.19 2.10
1338 1365 6.750963 CAGATTCTCCTTGCTAAATGCTTTTC 59.249 38.462 0.11 0.00 43.37 2.29
1409 1440 6.417930 GCACACTTTTCAGATAACCAACTTTC 59.582 38.462 0.00 0.00 0.00 2.62
1531 1564 1.444836 TTTATTTGCGGGAGTCGGTG 58.555 50.000 0.00 0.00 39.69 4.94
1563 1596 5.058490 AGATTTAAACCAAACTCGGTCGAA 58.942 37.500 0.00 0.00 38.76 3.71
1620 1656 2.677836 CAGATGTTGTGGTCCATTACGG 59.322 50.000 0.00 0.00 0.00 4.02
1648 1684 9.230122 TGCAGTTTAGTCTCATGATTATGAAAA 57.770 29.630 0.00 0.00 42.48 2.29
1662 1700 2.901249 ACAACACGTGCAGTTTAGTCT 58.099 42.857 17.22 0.00 0.00 3.24
1685 1723 7.806409 TGGATCAATCACGAAACATGATTAT 57.194 32.000 0.00 0.00 43.39 1.28
1868 2564 6.474140 TGCAAGTTATCTTCTCCGGTTATA 57.526 37.500 0.00 0.00 0.00 0.98
1869 2565 5.353394 TGCAAGTTATCTTCTCCGGTTAT 57.647 39.130 0.00 0.00 0.00 1.89
2024 2725 4.827284 TGGAAGGAACATCTGAAAGGTTTC 59.173 41.667 0.00 0.00 37.69 2.78
2025 2726 4.803452 TGGAAGGAACATCTGAAAGGTTT 58.197 39.130 0.00 0.00 0.00 3.27
2086 2787 5.295292 ACCAGAGATATGTCTTTTGCAATCG 59.705 40.000 0.00 0.00 33.97 3.34
2090 2791 5.188555 AGAGACCAGAGATATGTCTTTTGCA 59.811 40.000 0.00 0.00 39.36 4.08
2097 2798 7.531857 TTAATCCAGAGACCAGAGATATGTC 57.468 40.000 0.00 0.00 0.00 3.06
2098 2799 7.921041 TTTAATCCAGAGACCAGAGATATGT 57.079 36.000 0.00 0.00 0.00 2.29
2224 2928 0.037697 AAACGACTACGATGCCTGCA 60.038 50.000 0.00 0.00 42.66 4.41
2253 2957 8.792831 AAATATTGCATTTATCTCTTTCGCAG 57.207 30.769 0.00 0.00 0.00 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.