Multiple sequence alignment - TraesCS4B01G078800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G078800 chr4B 100.000 3481 0 0 1 3481 75780728 75777248 0.000000e+00 6429.0
1 TraesCS4B01G078800 chr4D 90.853 2416 102 56 482 2834 51617399 51615040 0.000000e+00 3127.0
2 TraesCS4B01G078800 chr4A 87.280 1423 76 47 524 1905 544952591 544953949 0.000000e+00 1528.0
3 TraesCS4B01G078800 chr4A 90.610 852 33 21 1922 2752 544954206 544955031 0.000000e+00 1086.0
4 TraesCS4B01G078800 chr4A 85.153 229 20 6 299 527 544952178 544952392 4.520000e-54 222.0
5 TraesCS4B01G078800 chr4A 90.741 108 10 0 185 292 695874025 695873918 1.010000e-30 145.0
6 TraesCS4B01G078800 chr4A 97.917 48 1 0 2757 2804 544955058 544955105 2.230000e-12 84.2
7 TraesCS4B01G078800 chr6B 82.261 513 75 8 2914 3415 260120191 260120698 2.480000e-116 429.0
8 TraesCS4B01G078800 chr6A 84.186 430 53 7 3009 3425 199986737 199986310 1.500000e-108 403.0
9 TraesCS4B01G078800 chr6A 78.336 577 103 13 2844 3401 431138874 431138301 1.540000e-93 353.0
10 TraesCS4B01G078800 chr5D 79.304 575 97 11 2843 3414 525121104 525121659 1.960000e-102 383.0
11 TraesCS4B01G078800 chr5D 83.594 384 50 8 3037 3414 410082569 410082945 7.150000e-92 348.0
12 TraesCS4B01G078800 chr5D 82.759 348 46 9 3073 3417 427534241 427534577 7.300000e-77 298.0
13 TraesCS4B01G078800 chr6D 80.075 532 88 9 2906 3424 310554635 310555161 2.540000e-101 379.0
14 TraesCS4B01G078800 chr2D 78.873 497 83 16 2851 3339 95179149 95178667 2.020000e-82 316.0
15 TraesCS4B01G078800 chr2D 89.381 113 9 3 181 292 28252927 28252817 4.690000e-29 139.0
16 TraesCS4B01G078800 chr2A 78.011 523 98 14 2911 3424 686008599 686009113 2.610000e-81 313.0
17 TraesCS4B01G078800 chr7D 77.331 547 83 19 2894 3424 107797140 107796619 5.690000e-73 285.0
18 TraesCS4B01G078800 chr3A 77.030 505 73 20 2938 3424 528513560 528513081 2.070000e-62 250.0
19 TraesCS4B01G078800 chr2B 82.990 194 31 2 1000 1192 196541599 196541407 1.280000e-39 174.0
20 TraesCS4B01G078800 chr5B 89.565 115 9 3 188 300 636064063 636063950 3.620000e-30 143.0
21 TraesCS4B01G078800 chr7B 89.623 106 9 2 188 292 134116030 134115926 2.180000e-27 134.0
22 TraesCS4B01G078800 chr3B 89.623 106 9 2 188 292 434003562 434003458 2.180000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G078800 chr4B 75777248 75780728 3480 True 6429.00 6429 100.000 1 3481 1 chr4B.!!$R1 3480
1 TraesCS4B01G078800 chr4D 51615040 51617399 2359 True 3127.00 3127 90.853 482 2834 1 chr4D.!!$R1 2352
2 TraesCS4B01G078800 chr4A 544952178 544955105 2927 False 730.05 1528 90.240 299 2804 4 chr4A.!!$F1 2505
3 TraesCS4B01G078800 chr6B 260120191 260120698 507 False 429.00 429 82.261 2914 3415 1 chr6B.!!$F1 501
4 TraesCS4B01G078800 chr6A 431138301 431138874 573 True 353.00 353 78.336 2844 3401 1 chr6A.!!$R2 557
5 TraesCS4B01G078800 chr5D 525121104 525121659 555 False 383.00 383 79.304 2843 3414 1 chr5D.!!$F3 571
6 TraesCS4B01G078800 chr6D 310554635 310555161 526 False 379.00 379 80.075 2906 3424 1 chr6D.!!$F1 518
7 TraesCS4B01G078800 chr2A 686008599 686009113 514 False 313.00 313 78.011 2911 3424 1 chr2A.!!$F1 513
8 TraesCS4B01G078800 chr7D 107796619 107797140 521 True 285.00 285 77.331 2894 3424 1 chr7D.!!$R1 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
849 1085 0.239347 CGACCGACGTCCAGTTTAGT 59.761 55.0 10.58 0.0 35.4 2.24 F
1515 1768 0.105224 TCGCCTTGGTTTTGTCTCGA 59.895 50.0 0.00 0.0 0.0 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2390 2903 0.035881 TCGTGGTGGAGTACTCGTCT 59.964 55.0 16.56 0.0 0.00 4.18 R
3428 4002 0.028902 CCGATATCGTGCTGTCGTGA 59.971 55.0 22.81 0.0 37.74 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.700846 CAATGCGTAGGTAGACTATGTAGG 58.299 45.833 0.00 0.00 40.21 3.18
24 25 3.144506 TGCGTAGGTAGACTATGTAGGC 58.855 50.000 9.92 9.92 40.21 3.93
25 26 3.144506 GCGTAGGTAGACTATGTAGGCA 58.855 50.000 11.18 0.00 40.21 4.75
26 27 3.567164 GCGTAGGTAGACTATGTAGGCAA 59.433 47.826 11.18 0.00 40.21 4.52
27 28 4.037208 GCGTAGGTAGACTATGTAGGCAAA 59.963 45.833 11.18 0.00 40.21 3.68
28 29 5.278858 GCGTAGGTAGACTATGTAGGCAAAT 60.279 44.000 11.18 0.00 40.21 2.32
29 30 6.737899 GCGTAGGTAGACTATGTAGGCAAATT 60.738 42.308 11.18 0.00 40.21 1.82
30 31 7.522725 GCGTAGGTAGACTATGTAGGCAAATTA 60.523 40.741 11.18 0.00 40.21 1.40
31 32 8.521176 CGTAGGTAGACTATGTAGGCAAATTAT 58.479 37.037 0.00 0.00 34.58 1.28
32 33 9.640963 GTAGGTAGACTATGTAGGCAAATTATG 57.359 37.037 0.00 0.00 32.29 1.90
33 34 8.492415 AGGTAGACTATGTAGGCAAATTATGA 57.508 34.615 0.00 0.00 32.29 2.15
34 35 8.589338 AGGTAGACTATGTAGGCAAATTATGAG 58.411 37.037 0.00 0.00 32.29 2.90
35 36 7.332182 GGTAGACTATGTAGGCAAATTATGAGC 59.668 40.741 0.00 0.00 32.29 4.26
36 37 5.928839 AGACTATGTAGGCAAATTATGAGCG 59.071 40.000 0.00 0.00 32.29 5.03
37 38 4.997395 ACTATGTAGGCAAATTATGAGCGG 59.003 41.667 0.00 0.00 0.00 5.52
38 39 3.275617 TGTAGGCAAATTATGAGCGGT 57.724 42.857 0.00 0.00 0.00 5.68
39 40 4.409718 TGTAGGCAAATTATGAGCGGTA 57.590 40.909 0.00 0.00 0.00 4.02
40 41 4.124238 TGTAGGCAAATTATGAGCGGTAC 58.876 43.478 0.00 0.00 0.00 3.34
41 42 3.275617 AGGCAAATTATGAGCGGTACA 57.724 42.857 0.00 0.00 0.00 2.90
42 43 3.820557 AGGCAAATTATGAGCGGTACAT 58.179 40.909 0.00 0.00 0.00 2.29
43 44 4.207165 AGGCAAATTATGAGCGGTACATT 58.793 39.130 0.00 0.00 0.00 2.71
44 45 4.036734 AGGCAAATTATGAGCGGTACATTG 59.963 41.667 0.00 1.24 0.00 2.82
45 46 4.036262 GGCAAATTATGAGCGGTACATTGA 59.964 41.667 0.00 0.00 0.00 2.57
46 47 5.278463 GGCAAATTATGAGCGGTACATTGAT 60.278 40.000 0.00 0.00 0.00 2.57
47 48 6.208644 GCAAATTATGAGCGGTACATTGATT 58.791 36.000 0.00 4.65 0.00 2.57
48 49 7.359595 GCAAATTATGAGCGGTACATTGATTA 58.640 34.615 0.00 0.00 0.00 1.75
49 50 7.860373 GCAAATTATGAGCGGTACATTGATTAA 59.140 33.333 0.00 0.00 0.00 1.40
50 51 9.897744 CAAATTATGAGCGGTACATTGATTAAT 57.102 29.630 0.00 0.00 0.00 1.40
52 53 4.811555 TGAGCGGTACATTGATTAATGC 57.188 40.909 9.96 0.00 46.05 3.56
53 54 4.195416 TGAGCGGTACATTGATTAATGCA 58.805 39.130 9.96 0.00 46.05 3.96
54 55 4.821260 TGAGCGGTACATTGATTAATGCAT 59.179 37.500 9.96 0.00 46.05 3.96
55 56 5.994668 TGAGCGGTACATTGATTAATGCATA 59.005 36.000 9.96 0.00 46.05 3.14
56 57 6.484977 TGAGCGGTACATTGATTAATGCATAA 59.515 34.615 9.96 0.00 46.05 1.90
57 58 7.012799 TGAGCGGTACATTGATTAATGCATAAA 59.987 33.333 9.96 0.00 46.05 1.40
58 59 7.711846 AGCGGTACATTGATTAATGCATAAAA 58.288 30.769 9.96 0.00 46.05 1.52
59 60 8.194104 AGCGGTACATTGATTAATGCATAAAAA 58.806 29.630 9.96 0.00 46.05 1.94
60 61 8.265998 GCGGTACATTGATTAATGCATAAAAAC 58.734 33.333 9.96 0.00 46.05 2.43
61 62 8.751335 CGGTACATTGATTAATGCATAAAAACC 58.249 33.333 9.96 0.09 46.05 3.27
62 63 9.816354 GGTACATTGATTAATGCATAAAAACCT 57.184 29.630 9.96 0.00 46.05 3.50
72 73 9.930158 TTAATGCATAAAAACCTTATACTCCCT 57.070 29.630 0.00 0.00 0.00 4.20
73 74 8.465273 AATGCATAAAAACCTTATACTCCCTC 57.535 34.615 0.00 0.00 0.00 4.30
74 75 6.362248 TGCATAAAAACCTTATACTCCCTCC 58.638 40.000 0.00 0.00 0.00 4.30
75 76 6.069323 TGCATAAAAACCTTATACTCCCTCCA 60.069 38.462 0.00 0.00 0.00 3.86
76 77 6.831868 GCATAAAAACCTTATACTCCCTCCAA 59.168 38.462 0.00 0.00 0.00 3.53
77 78 7.505923 GCATAAAAACCTTATACTCCCTCCAAT 59.494 37.037 0.00 0.00 0.00 3.16
78 79 9.067986 CATAAAAACCTTATACTCCCTCCAATC 57.932 37.037 0.00 0.00 0.00 2.67
79 80 4.957684 AACCTTATACTCCCTCCAATCG 57.042 45.455 0.00 0.00 0.00 3.34
80 81 3.924922 ACCTTATACTCCCTCCAATCGT 58.075 45.455 0.00 0.00 0.00 3.73
81 82 5.070823 ACCTTATACTCCCTCCAATCGTA 57.929 43.478 0.00 0.00 0.00 3.43
82 83 5.652324 ACCTTATACTCCCTCCAATCGTAT 58.348 41.667 0.00 0.00 0.00 3.06
83 84 6.082707 ACCTTATACTCCCTCCAATCGTATT 58.917 40.000 0.00 0.00 0.00 1.89
84 85 7.243824 ACCTTATACTCCCTCCAATCGTATTA 58.756 38.462 0.00 0.00 0.00 0.98
85 86 7.731688 ACCTTATACTCCCTCCAATCGTATTAA 59.268 37.037 0.00 0.00 0.00 1.40
86 87 8.759782 CCTTATACTCCCTCCAATCGTATTAAT 58.240 37.037 0.00 0.00 0.00 1.40
88 89 9.938280 TTATACTCCCTCCAATCGTATTAATTG 57.062 33.333 0.00 0.00 34.55 2.32
89 90 6.248569 ACTCCCTCCAATCGTATTAATTGT 57.751 37.500 0.00 0.00 33.22 2.71
90 91 6.289064 ACTCCCTCCAATCGTATTAATTGTC 58.711 40.000 0.00 0.00 33.22 3.18
91 92 6.126883 ACTCCCTCCAATCGTATTAATTGTCA 60.127 38.462 0.00 0.00 33.22 3.58
92 93 6.654959 TCCCTCCAATCGTATTAATTGTCAA 58.345 36.000 0.00 0.00 33.22 3.18
93 94 7.287061 TCCCTCCAATCGTATTAATTGTCAAT 58.713 34.615 0.00 0.00 33.22 2.57
94 95 8.433599 TCCCTCCAATCGTATTAATTGTCAATA 58.566 33.333 0.00 0.00 33.22 1.90
95 96 9.062524 CCCTCCAATCGTATTAATTGTCAATAA 57.937 33.333 0.00 0.00 33.22 1.40
96 97 9.878599 CCTCCAATCGTATTAATTGTCAATAAC 57.121 33.333 0.00 0.00 33.22 1.89
97 98 9.878599 CTCCAATCGTATTAATTGTCAATAACC 57.121 33.333 0.00 0.00 33.22 2.85
98 99 9.621629 TCCAATCGTATTAATTGTCAATAACCT 57.378 29.630 0.00 0.00 33.22 3.50
110 111 6.726490 TGTCAATAACCTAGTAGTCCATCC 57.274 41.667 0.00 0.00 0.00 3.51
111 112 6.199376 TGTCAATAACCTAGTAGTCCATCCA 58.801 40.000 0.00 0.00 0.00 3.41
112 113 6.844388 TGTCAATAACCTAGTAGTCCATCCAT 59.156 38.462 0.00 0.00 0.00 3.41
113 114 7.015292 TGTCAATAACCTAGTAGTCCATCCATC 59.985 40.741 0.00 0.00 0.00 3.51
114 115 6.497259 TCAATAACCTAGTAGTCCATCCATCC 59.503 42.308 0.00 0.00 0.00 3.51
115 116 3.993658 ACCTAGTAGTCCATCCATCCA 57.006 47.619 0.00 0.00 0.00 3.41
116 117 3.850752 ACCTAGTAGTCCATCCATCCAG 58.149 50.000 0.00 0.00 0.00 3.86
117 118 3.467483 ACCTAGTAGTCCATCCATCCAGA 59.533 47.826 0.00 0.00 0.00 3.86
118 119 4.078571 ACCTAGTAGTCCATCCATCCAGAA 60.079 45.833 0.00 0.00 0.00 3.02
119 120 4.901849 CCTAGTAGTCCATCCATCCAGAAA 59.098 45.833 0.00 0.00 0.00 2.52
120 121 5.545723 CCTAGTAGTCCATCCATCCAGAAAT 59.454 44.000 0.00 0.00 0.00 2.17
121 122 6.726299 CCTAGTAGTCCATCCATCCAGAAATA 59.274 42.308 0.00 0.00 0.00 1.40
122 123 6.426646 AGTAGTCCATCCATCCAGAAATAC 57.573 41.667 0.00 0.00 0.00 1.89
123 124 6.146760 AGTAGTCCATCCATCCAGAAATACT 58.853 40.000 0.00 0.00 0.00 2.12
124 125 5.559148 AGTCCATCCATCCAGAAATACTC 57.441 43.478 0.00 0.00 0.00 2.59
125 126 4.039730 AGTCCATCCATCCAGAAATACTCG 59.960 45.833 0.00 0.00 0.00 4.18
126 127 3.967326 TCCATCCATCCAGAAATACTCGT 59.033 43.478 0.00 0.00 0.00 4.18
127 128 4.039245 TCCATCCATCCAGAAATACTCGTC 59.961 45.833 0.00 0.00 0.00 4.20
128 129 3.710326 TCCATCCAGAAATACTCGTCG 57.290 47.619 0.00 0.00 0.00 5.12
129 130 2.361119 TCCATCCAGAAATACTCGTCGG 59.639 50.000 0.00 0.00 0.00 4.79
130 131 2.361119 CCATCCAGAAATACTCGTCGGA 59.639 50.000 0.00 0.00 0.00 4.55
131 132 3.551046 CCATCCAGAAATACTCGTCGGAG 60.551 52.174 0.00 0.00 46.13 4.63
132 133 2.995283 TCCAGAAATACTCGTCGGAGA 58.005 47.619 0.00 0.00 43.27 3.71
133 134 3.349927 TCCAGAAATACTCGTCGGAGAA 58.650 45.455 0.00 0.00 43.27 2.87
134 135 3.128242 TCCAGAAATACTCGTCGGAGAAC 59.872 47.826 0.00 0.00 43.27 3.01
135 136 3.128938 CCAGAAATACTCGTCGGAGAACT 59.871 47.826 0.00 0.00 43.27 3.01
136 137 4.099120 CAGAAATACTCGTCGGAGAACTG 58.901 47.826 0.00 0.00 43.27 3.16
137 138 4.008330 AGAAATACTCGTCGGAGAACTGA 58.992 43.478 0.00 0.00 43.27 3.41
138 139 4.458295 AGAAATACTCGTCGGAGAACTGAA 59.542 41.667 0.00 0.00 43.27 3.02
139 140 4.778534 AATACTCGTCGGAGAACTGAAA 57.221 40.909 0.00 0.00 43.27 2.69
140 141 4.985538 ATACTCGTCGGAGAACTGAAAT 57.014 40.909 0.00 0.00 43.27 2.17
141 142 3.219052 ACTCGTCGGAGAACTGAAATC 57.781 47.619 0.00 0.00 43.27 2.17
142 143 2.177977 CTCGTCGGAGAACTGAAATCG 58.822 52.381 0.00 0.00 43.27 3.34
143 144 1.808343 TCGTCGGAGAACTGAAATCGA 59.192 47.619 0.00 0.00 39.69 3.59
144 145 2.159558 TCGTCGGAGAACTGAAATCGAG 60.160 50.000 0.00 0.00 39.69 4.04
145 146 2.159558 CGTCGGAGAACTGAAATCGAGA 60.160 50.000 0.00 0.00 39.69 4.04
146 147 3.172824 GTCGGAGAACTGAAATCGAGAC 58.827 50.000 0.00 0.00 39.69 3.36
147 148 2.159558 TCGGAGAACTGAAATCGAGACG 60.160 50.000 0.00 0.00 0.00 4.18
148 149 2.531206 GGAGAACTGAAATCGAGACGG 58.469 52.381 0.00 0.00 0.00 4.79
149 150 2.163815 GGAGAACTGAAATCGAGACGGA 59.836 50.000 0.00 0.00 0.00 4.69
150 151 3.430931 GAGAACTGAAATCGAGACGGAG 58.569 50.000 0.00 0.00 0.00 4.63
151 152 2.164624 AGAACTGAAATCGAGACGGAGG 59.835 50.000 0.00 0.00 0.00 4.30
152 153 0.818296 ACTGAAATCGAGACGGAGGG 59.182 55.000 0.00 0.00 0.00 4.30
153 154 1.103803 CTGAAATCGAGACGGAGGGA 58.896 55.000 0.00 0.00 0.00 4.20
154 155 1.066303 CTGAAATCGAGACGGAGGGAG 59.934 57.143 0.00 0.00 0.00 4.30
155 156 1.104630 GAAATCGAGACGGAGGGAGT 58.895 55.000 0.00 0.00 0.00 3.85
156 157 2.295885 GAAATCGAGACGGAGGGAGTA 58.704 52.381 0.00 0.00 0.00 2.59
157 158 2.660670 AATCGAGACGGAGGGAGTAT 57.339 50.000 0.00 0.00 0.00 2.12
158 159 3.784511 AATCGAGACGGAGGGAGTATA 57.215 47.619 0.00 0.00 0.00 1.47
159 160 3.784511 ATCGAGACGGAGGGAGTATAA 57.215 47.619 0.00 0.00 0.00 0.98
160 161 2.843701 TCGAGACGGAGGGAGTATAAC 58.156 52.381 0.00 0.00 0.00 1.89
161 162 2.437281 TCGAGACGGAGGGAGTATAACT 59.563 50.000 0.00 0.00 0.00 2.24
162 163 3.118112 TCGAGACGGAGGGAGTATAACTT 60.118 47.826 0.00 0.00 0.00 2.66
163 164 3.631227 CGAGACGGAGGGAGTATAACTTT 59.369 47.826 0.00 0.00 0.00 2.66
164 165 4.818546 CGAGACGGAGGGAGTATAACTTTA 59.181 45.833 0.00 0.00 0.00 1.85
165 166 5.049543 CGAGACGGAGGGAGTATAACTTTAG 60.050 48.000 0.00 0.00 0.00 1.85
166 167 5.764432 AGACGGAGGGAGTATAACTTTAGT 58.236 41.667 0.00 0.00 0.00 2.24
167 168 6.904626 AGACGGAGGGAGTATAACTTTAGTA 58.095 40.000 0.00 0.00 0.00 1.82
168 169 6.997476 AGACGGAGGGAGTATAACTTTAGTAG 59.003 42.308 0.00 0.00 0.00 2.57
169 170 6.904626 ACGGAGGGAGTATAACTTTAGTAGA 58.095 40.000 0.00 0.00 0.00 2.59
170 171 6.997476 ACGGAGGGAGTATAACTTTAGTAGAG 59.003 42.308 0.00 0.00 0.00 2.43
171 172 6.430616 CGGAGGGAGTATAACTTTAGTAGAGG 59.569 46.154 0.00 0.00 0.00 3.69
172 173 6.720748 GGAGGGAGTATAACTTTAGTAGAGGG 59.279 46.154 0.00 0.00 0.00 4.30
173 174 7.422325 GGAGGGAGTATAACTTTAGTAGAGGGA 60.422 44.444 0.00 0.00 0.00 4.20
174 175 7.528675 AGGGAGTATAACTTTAGTAGAGGGAG 58.471 42.308 0.00 0.00 0.00 4.30
175 176 6.720748 GGGAGTATAACTTTAGTAGAGGGAGG 59.279 46.154 0.00 0.00 0.00 4.30
176 177 7.422325 GGGAGTATAACTTTAGTAGAGGGAGGA 60.422 44.444 0.00 0.00 0.00 3.71
177 178 7.448161 GGAGTATAACTTTAGTAGAGGGAGGAC 59.552 44.444 0.00 0.00 0.00 3.85
178 179 8.116679 AGTATAACTTTAGTAGAGGGAGGACT 57.883 38.462 0.00 0.00 0.00 3.85
179 180 8.567851 AGTATAACTTTAGTAGAGGGAGGACTT 58.432 37.037 0.00 0.00 0.00 3.01
180 181 9.859152 GTATAACTTTAGTAGAGGGAGGACTTA 57.141 37.037 0.00 0.00 0.00 2.24
182 183 7.721409 AACTTTAGTAGAGGGAGGACTTAAG 57.279 40.000 0.00 0.00 36.43 1.85
183 184 7.042106 ACTTTAGTAGAGGGAGGACTTAAGA 57.958 40.000 10.09 0.00 34.83 2.10
184 185 7.654452 ACTTTAGTAGAGGGAGGACTTAAGAT 58.346 38.462 10.09 0.00 34.83 2.40
185 186 8.789782 ACTTTAGTAGAGGGAGGACTTAAGATA 58.210 37.037 10.09 0.00 34.83 1.98
186 187 9.816787 CTTTAGTAGAGGGAGGACTTAAGATAT 57.183 37.037 10.09 0.00 33.67 1.63
188 189 9.810870 TTAGTAGAGGGAGGACTTAAGATATTC 57.189 37.037 10.09 0.00 0.00 1.75
189 190 7.243091 AGTAGAGGGAGGACTTAAGATATTCC 58.757 42.308 10.09 5.59 0.00 3.01
190 191 5.407936 AGAGGGAGGACTTAAGATATTCCC 58.592 45.833 21.14 21.14 42.49 3.97
191 192 5.441727 AGGGAGGACTTAAGATATTCCCT 57.558 43.478 23.59 23.59 46.32 4.20
192 193 5.748670 GGGAGGACTTAAGATATTCCCTC 57.251 47.826 21.28 17.74 39.72 4.30
193 194 5.407936 GGGAGGACTTAAGATATTCCCTCT 58.592 45.833 21.28 2.42 39.72 3.69
194 195 5.247337 GGGAGGACTTAAGATATTCCCTCTG 59.753 48.000 21.28 0.00 39.72 3.35
195 196 5.841783 GGAGGACTTAAGATATTCCCTCTGT 59.158 44.000 10.09 0.00 38.87 3.41
196 197 6.327887 GGAGGACTTAAGATATTCCCTCTGTT 59.672 42.308 10.09 0.00 38.87 3.16
197 198 7.368198 AGGACTTAAGATATTCCCTCTGTTC 57.632 40.000 10.09 0.00 0.00 3.18
198 199 6.903534 AGGACTTAAGATATTCCCTCTGTTCA 59.096 38.462 10.09 0.00 0.00 3.18
199 200 7.570607 AGGACTTAAGATATTCCCTCTGTTCAT 59.429 37.037 10.09 0.00 0.00 2.57
200 201 8.214364 GGACTTAAGATATTCCCTCTGTTCATT 58.786 37.037 10.09 0.00 0.00 2.57
201 202 9.620259 GACTTAAGATATTCCCTCTGTTCATTT 57.380 33.333 10.09 0.00 0.00 2.32
202 203 9.981460 ACTTAAGATATTCCCTCTGTTCATTTT 57.019 29.630 10.09 0.00 0.00 1.82
211 212 8.575649 TTCCCTCTGTTCATTTTTATAAGACC 57.424 34.615 0.00 0.00 0.00 3.85
212 213 7.928873 TCCCTCTGTTCATTTTTATAAGACCT 58.071 34.615 0.00 0.00 0.00 3.85
213 214 8.047310 TCCCTCTGTTCATTTTTATAAGACCTC 58.953 37.037 0.00 0.00 0.00 3.85
214 215 7.011482 CCCTCTGTTCATTTTTATAAGACCTCG 59.989 40.741 0.00 0.00 0.00 4.63
215 216 7.764443 CCTCTGTTCATTTTTATAAGACCTCGA 59.236 37.037 0.00 0.00 0.00 4.04
216 217 9.151471 CTCTGTTCATTTTTATAAGACCTCGAA 57.849 33.333 0.00 0.00 0.00 3.71
217 218 9.151471 TCTGTTCATTTTTATAAGACCTCGAAG 57.849 33.333 0.00 0.00 0.00 3.79
218 219 9.151471 CTGTTCATTTTTATAAGACCTCGAAGA 57.849 33.333 0.00 0.00 0.00 2.87
235 236 6.408858 TCGAAGAGATTTTAGACAATGTGC 57.591 37.500 0.00 0.00 0.00 4.57
236 237 5.931724 TCGAAGAGATTTTAGACAATGTGCA 59.068 36.000 0.00 0.00 0.00 4.57
237 238 6.426633 TCGAAGAGATTTTAGACAATGTGCAA 59.573 34.615 0.00 0.00 0.00 4.08
238 239 7.041440 TCGAAGAGATTTTAGACAATGTGCAAA 60.041 33.333 0.00 0.00 0.00 3.68
239 240 7.591057 CGAAGAGATTTTAGACAATGTGCAAAA 59.409 33.333 0.00 0.00 0.00 2.44
240 241 8.579682 AAGAGATTTTAGACAATGTGCAAAAC 57.420 30.769 0.00 0.00 0.00 2.43
241 242 7.715657 AGAGATTTTAGACAATGTGCAAAACA 58.284 30.769 0.00 0.00 44.79 2.83
242 243 8.362639 AGAGATTTTAGACAATGTGCAAAACAT 58.637 29.630 0.00 0.00 44.51 2.71
243 244 8.524870 AGATTTTAGACAATGTGCAAAACATC 57.475 30.769 0.00 0.00 44.51 3.06
244 245 7.599998 AGATTTTAGACAATGTGCAAAACATCC 59.400 33.333 0.00 0.00 44.51 3.51
245 246 6.403866 TTTAGACAATGTGCAAAACATCCT 57.596 33.333 0.00 0.00 44.51 3.24
246 247 7.517614 TTTAGACAATGTGCAAAACATCCTA 57.482 32.000 0.00 0.00 44.51 2.94
247 248 7.701539 TTAGACAATGTGCAAAACATCCTAT 57.298 32.000 0.00 0.00 44.51 2.57
248 249 6.594788 AGACAATGTGCAAAACATCCTATT 57.405 33.333 0.00 0.00 44.51 1.73
249 250 6.996509 AGACAATGTGCAAAACATCCTATTT 58.003 32.000 0.00 0.00 44.51 1.40
250 251 7.444299 AGACAATGTGCAAAACATCCTATTTT 58.556 30.769 0.00 0.00 44.51 1.82
251 252 7.385752 AGACAATGTGCAAAACATCCTATTTTG 59.614 33.333 0.00 5.96 45.68 2.44
252 253 7.215789 ACAATGTGCAAAACATCCTATTTTGA 58.784 30.769 13.00 0.00 45.75 2.69
253 254 7.385752 ACAATGTGCAAAACATCCTATTTTGAG 59.614 33.333 13.00 0.44 45.75 3.02
254 255 6.647334 TGTGCAAAACATCCTATTTTGAGA 57.353 33.333 13.00 0.00 45.75 3.27
255 256 7.230849 TGTGCAAAACATCCTATTTTGAGAT 57.769 32.000 13.00 0.00 45.75 2.75
256 257 7.092079 TGTGCAAAACATCCTATTTTGAGATG 58.908 34.615 13.00 0.00 45.75 2.90
261 262 5.614324 ACATCCTATTTTGAGATGTCGGA 57.386 39.130 0.00 0.00 45.73 4.55
262 263 5.989477 ACATCCTATTTTGAGATGTCGGAA 58.011 37.500 0.00 0.00 45.73 4.30
263 264 6.414732 ACATCCTATTTTGAGATGTCGGAAA 58.585 36.000 0.00 0.00 45.73 3.13
264 265 6.316390 ACATCCTATTTTGAGATGTCGGAAAC 59.684 38.462 0.00 0.00 45.73 2.78
265 266 8.793519 ACATCCTATTTTGAGATGTCGGAAACG 61.794 40.741 0.00 0.00 45.73 3.60
281 282 4.755388 GGAAACGACTTACGAAAGTGAAC 58.245 43.478 0.00 0.00 46.09 3.18
282 283 4.427438 AAACGACTTACGAAAGTGAACG 57.573 40.909 0.00 0.00 46.09 3.95
283 284 2.388121 ACGACTTACGAAAGTGAACGG 58.612 47.619 0.00 0.00 46.09 4.44
284 285 2.033299 ACGACTTACGAAAGTGAACGGA 59.967 45.455 0.00 0.00 46.09 4.69
285 286 2.655474 CGACTTACGAAAGTGAACGGAG 59.345 50.000 0.00 0.00 46.09 4.63
286 287 2.985139 GACTTACGAAAGTGAACGGAGG 59.015 50.000 0.00 0.00 46.09 4.30
287 288 4.160638 GACTTACGAAAGTGAACGGAGGG 61.161 52.174 0.00 0.00 46.09 4.30
288 289 2.433217 ACGAAAGTGAACGGAGGGA 58.567 52.632 0.00 0.00 46.97 4.20
289 290 0.317479 ACGAAAGTGAACGGAGGGAG 59.683 55.000 0.00 0.00 46.97 4.30
290 291 0.317479 CGAAAGTGAACGGAGGGAGT 59.683 55.000 0.00 0.00 0.00 3.85
291 292 1.542915 CGAAAGTGAACGGAGGGAGTA 59.457 52.381 0.00 0.00 0.00 2.59
292 293 2.670509 CGAAAGTGAACGGAGGGAGTAC 60.671 54.545 0.00 0.00 0.00 2.73
293 294 2.305858 AAGTGAACGGAGGGAGTACT 57.694 50.000 0.00 0.00 0.00 2.73
294 295 2.305858 AGTGAACGGAGGGAGTACTT 57.694 50.000 0.00 0.00 0.00 2.24
295 296 2.606378 AGTGAACGGAGGGAGTACTTT 58.394 47.619 0.00 0.00 0.00 2.66
296 297 2.970640 AGTGAACGGAGGGAGTACTTTT 59.029 45.455 0.00 0.00 0.00 2.27
297 298 3.390311 AGTGAACGGAGGGAGTACTTTTT 59.610 43.478 0.00 0.00 0.00 1.94
340 341 3.758554 GCTTCCTTGGCTCAGAAATACAA 59.241 43.478 0.00 0.00 0.00 2.41
409 410 2.768527 TCCAATTCAAGTTTTGGCCACA 59.231 40.909 3.88 0.00 41.78 4.17
413 414 4.961438 ATTCAAGTTTTGGCCACATCTT 57.039 36.364 3.88 7.24 0.00 2.40
415 416 4.320608 TCAAGTTTTGGCCACATCTTTC 57.679 40.909 3.88 0.00 0.00 2.62
436 437 7.658982 TCTTTCTGAGCGAATTAATATGCATCT 59.341 33.333 0.19 0.00 0.00 2.90
437 438 7.734924 TTCTGAGCGAATTAATATGCATCTT 57.265 32.000 0.19 1.68 0.00 2.40
438 439 7.734924 TCTGAGCGAATTAATATGCATCTTT 57.265 32.000 0.19 0.72 0.00 2.52
441 442 8.564648 TGAGCGAATTAATATGCATCTTTTTG 57.435 30.769 0.19 0.00 0.00 2.44
442 443 8.404765 TGAGCGAATTAATATGCATCTTTTTGA 58.595 29.630 0.19 0.00 0.00 2.69
443 444 8.792831 AGCGAATTAATATGCATCTTTTTGAG 57.207 30.769 0.19 0.00 0.00 3.02
444 445 8.623903 AGCGAATTAATATGCATCTTTTTGAGA 58.376 29.630 0.19 0.00 39.13 3.27
445 446 8.899776 GCGAATTAATATGCATCTTTTTGAGAG 58.100 33.333 0.19 0.00 37.93 3.20
446 447 9.941664 CGAATTAATATGCATCTTTTTGAGAGT 57.058 29.630 0.19 0.00 37.93 3.24
489 490 3.104512 CAGTGAAGTAGGGTGGGTCATA 58.895 50.000 0.00 0.00 0.00 2.15
494 495 1.938069 AGTAGGGTGGGTCATAGTCCT 59.062 52.381 0.00 0.00 0.00 3.85
495 496 2.091222 AGTAGGGTGGGTCATAGTCCTC 60.091 54.545 0.00 0.00 0.00 3.71
496 497 0.397254 AGGGTGGGTCATAGTCCTCG 60.397 60.000 0.00 0.00 0.00 4.63
497 498 0.396695 GGGTGGGTCATAGTCCTCGA 60.397 60.000 0.00 0.00 0.00 4.04
517 518 3.379445 GCACCCGAGGACGAAGGA 61.379 66.667 0.00 0.00 42.66 3.36
522 523 0.679002 CCCGAGGACGAAGGACTACA 60.679 60.000 0.00 0.00 42.66 2.74
647 850 1.809207 CCAACCGCCCAATGTCATC 59.191 57.895 0.00 0.00 0.00 2.92
733 945 5.146460 CGCATACATATTTCCATTTCCACG 58.854 41.667 0.00 0.00 0.00 4.94
747 968 4.776322 CACGGGCCGGAAGCATCA 62.776 66.667 31.78 0.00 46.50 3.07
748 969 4.778143 ACGGGCCGGAAGCATCAC 62.778 66.667 31.78 0.00 46.50 3.06
812 1044 1.754910 GCTACTCCCTACCACTCCTCC 60.755 61.905 0.00 0.00 0.00 4.30
849 1085 0.239347 CGACCGACGTCCAGTTTAGT 59.761 55.000 10.58 0.00 35.40 2.24
884 1120 2.586792 GGACTCCGCCAGCTCAAT 59.413 61.111 0.00 0.00 0.00 2.57
917 1157 2.278989 GCGTACGGCGGCAGATAA 60.279 61.111 18.39 0.00 41.69 1.75
923 1163 2.902343 GGCGGCAGATAAGGTGGC 60.902 66.667 3.07 0.00 37.13 5.01
939 1179 4.459089 GCCGACTGTCCAGGGAGC 62.459 72.222 1.55 0.00 0.00 4.70
940 1180 3.775654 CCGACTGTCCAGGGAGCC 61.776 72.222 1.55 0.00 0.00 4.70
942 1182 2.680352 GACTGTCCAGGGAGCCGA 60.680 66.667 0.00 0.00 0.00 5.54
943 1183 2.681778 ACTGTCCAGGGAGCCGAG 60.682 66.667 0.00 0.00 0.00 4.63
945 1185 3.965026 CTGTCCAGGGAGCCGAGGA 62.965 68.421 0.00 0.00 31.99 3.71
946 1186 2.444895 GTCCAGGGAGCCGAGGAT 60.445 66.667 0.00 0.00 35.68 3.24
948 1188 1.762460 TCCAGGGAGCCGAGGATTC 60.762 63.158 0.00 0.00 30.08 2.52
949 1189 2.419198 CAGGGAGCCGAGGATTCG 59.581 66.667 0.00 0.00 46.29 3.34
952 1194 2.128507 GGGAGCCGAGGATTCGTCT 61.129 63.158 4.97 0.00 45.28 4.18
990 1232 2.322081 CGCCGTTGGTTGATCCGTT 61.322 57.895 0.00 0.00 39.52 4.44
991 1233 1.015085 CGCCGTTGGTTGATCCGTTA 61.015 55.000 0.00 0.00 39.52 3.18
992 1234 0.725117 GCCGTTGGTTGATCCGTTAG 59.275 55.000 0.00 0.00 39.52 2.34
993 1235 1.365699 CCGTTGGTTGATCCGTTAGG 58.634 55.000 0.00 0.00 39.52 2.69
994 1236 1.338389 CCGTTGGTTGATCCGTTAGGT 60.338 52.381 0.00 0.00 39.52 3.08
995 1237 1.730064 CGTTGGTTGATCCGTTAGGTG 59.270 52.381 0.00 0.00 39.52 4.00
996 1238 2.610976 CGTTGGTTGATCCGTTAGGTGA 60.611 50.000 0.00 0.00 39.52 4.02
1134 1376 2.668550 GCCAAGTTCTTCGGCCGT 60.669 61.111 27.15 0.06 40.07 5.68
1206 1459 4.261530 GGTACTTACCATCTCGCTACCTTC 60.262 50.000 0.17 0.00 45.73 3.46
1207 1460 3.362706 ACTTACCATCTCGCTACCTTCA 58.637 45.455 0.00 0.00 0.00 3.02
1208 1461 3.767673 ACTTACCATCTCGCTACCTTCAA 59.232 43.478 0.00 0.00 0.00 2.69
1209 1462 2.969628 ACCATCTCGCTACCTTCAAG 57.030 50.000 0.00 0.00 0.00 3.02
1210 1463 1.134670 ACCATCTCGCTACCTTCAAGC 60.135 52.381 0.00 0.00 36.60 4.01
1215 1468 3.081993 GCTACCTTCAAGCGACGC 58.918 61.111 13.03 13.03 0.00 5.19
1216 1469 2.789203 GCTACCTTCAAGCGACGCG 61.789 63.158 15.18 3.53 0.00 6.01
1217 1470 1.154093 CTACCTTCAAGCGACGCGA 60.154 57.895 15.93 3.47 0.00 5.87
1218 1471 1.134530 CTACCTTCAAGCGACGCGAG 61.135 60.000 15.93 11.17 0.00 5.03
1219 1472 3.843240 CCTTCAAGCGACGCGAGC 61.843 66.667 15.93 18.54 0.00 5.03
1220 1473 4.183526 CTTCAAGCGACGCGAGCG 62.184 66.667 15.93 17.67 46.03 5.03
1254 1507 3.848019 GCGTTGCAATTGTTCATCTAGTG 59.152 43.478 0.59 0.00 0.00 2.74
1256 1509 4.083324 CGTTGCAATTGTTCATCTAGTGGT 60.083 41.667 0.59 0.00 0.00 4.16
1257 1510 5.121611 CGTTGCAATTGTTCATCTAGTGGTA 59.878 40.000 0.59 0.00 0.00 3.25
1258 1511 6.546395 GTTGCAATTGTTCATCTAGTGGTAG 58.454 40.000 0.59 0.00 0.00 3.18
1260 1513 6.653020 TGCAATTGTTCATCTAGTGGTAGAT 58.347 36.000 7.40 0.00 45.47 1.98
1261 1514 7.791029 TGCAATTGTTCATCTAGTGGTAGATA 58.209 34.615 7.40 0.00 43.13 1.98
1263 1516 8.144478 GCAATTGTTCATCTAGTGGTAGATAGA 58.856 37.037 7.40 0.00 43.13 1.98
1299 1552 1.760192 GCAGATGGGCTGTCAAGAAT 58.240 50.000 0.00 0.00 46.62 2.40
1309 1562 2.287547 GCTGTCAAGAATGCGGAAAACA 60.288 45.455 0.00 0.00 0.00 2.83
1364 1617 1.002250 GCGTTGTCGATCACAGTCGT 61.002 55.000 16.81 0.00 42.07 4.34
1508 1761 3.141409 AACCCATCGCCTTGGTTTT 57.859 47.368 0.00 0.00 39.28 2.43
1515 1768 0.105224 TCGCCTTGGTTTTGTCTCGA 59.895 50.000 0.00 0.00 0.00 4.04
1649 1906 0.467384 CATGGGTCAGACTGGCTAGG 59.533 60.000 7.07 0.00 0.00 3.02
1816 2076 2.504032 CCCCTTCGGCGCTGAATA 59.496 61.111 30.61 11.38 0.00 1.75
1905 2165 9.393512 CAGGATTTCTAGAATCTTCTGTTGATT 57.606 33.333 5.89 0.00 38.19 2.57
1956 2459 6.601613 TGTTAGGATTGGGTGATTAACATGTC 59.398 38.462 0.00 0.00 0.00 3.06
1959 2462 4.035208 GGATTGGGTGATTAACATGTCGTC 59.965 45.833 0.00 0.00 0.00 4.20
1963 2466 5.172934 TGGGTGATTAACATGTCGTCTTAC 58.827 41.667 0.00 0.00 0.00 2.34
2264 2768 4.800554 CGGAGCAAGAACAACCCT 57.199 55.556 0.00 0.00 0.00 4.34
2423 2936 4.702081 ACGACGTGCTGCGAGGAC 62.702 66.667 0.00 0.00 44.77 3.85
2483 2996 3.134623 TGCTGAACCTCTTCAACTGAGAA 59.865 43.478 0.00 0.00 35.92 2.87
2524 3037 0.672091 TGCAGTTCGTGTGTGTGTGT 60.672 50.000 0.00 0.00 0.00 3.72
2568 3081 3.684788 GCATCGGTGTTAGTCAATGAAGT 59.315 43.478 0.00 0.00 0.00 3.01
2598 3111 4.167268 GACGTGCAACTTGGTTTACAAAA 58.833 39.130 0.00 0.00 38.91 2.44
2599 3112 4.557205 ACGTGCAACTTGGTTTACAAAAA 58.443 34.783 0.00 0.00 38.91 1.94
2636 3149 3.865745 TCTAGCGCTCTTATCTTTTGCAC 59.134 43.478 16.34 0.00 0.00 4.57
2698 3211 2.179427 TGAAGTGATCCGTGGTGAGAT 58.821 47.619 0.00 0.00 0.00 2.75
2708 3223 3.439129 TCCGTGGTGAGATACGCATATAG 59.561 47.826 0.00 0.00 38.87 1.31
2709 3224 3.427638 CCGTGGTGAGATACGCATATAGG 60.428 52.174 0.00 0.00 38.87 2.57
2710 3225 3.439129 CGTGGTGAGATACGCATATAGGA 59.561 47.826 0.00 0.00 33.25 2.94
2711 3226 4.437524 CGTGGTGAGATACGCATATAGGAG 60.438 50.000 0.00 0.00 33.25 3.69
2712 3227 4.459685 GTGGTGAGATACGCATATAGGAGT 59.540 45.833 0.00 0.00 0.00 3.85
2713 3228 5.646793 GTGGTGAGATACGCATATAGGAGTA 59.353 44.000 3.48 3.48 0.00 2.59
2774 3325 1.841556 AGAGGGTGCGGTCTTTGGA 60.842 57.895 0.00 0.00 0.00 3.53
2818 3369 2.079925 GGATAGCGATCTTCAATGGCC 58.920 52.381 6.77 0.00 32.15 5.36
2823 3374 1.439353 CGATCTTCAATGGCCACCCG 61.439 60.000 8.16 0.00 0.00 5.28
2824 3375 0.107214 GATCTTCAATGGCCACCCGA 60.107 55.000 8.16 0.98 0.00 5.14
2834 3385 2.267961 CCACCCGACCTGGTTAGC 59.732 66.667 0.00 0.00 36.12 3.09
2835 3386 2.125673 CACCCGACCTGGTTAGCG 60.126 66.667 0.00 0.00 36.12 4.26
2836 3387 4.078516 ACCCGACCTGGTTAGCGC 62.079 66.667 0.00 0.00 33.91 5.92
2837 3388 4.077184 CCCGACCTGGTTAGCGCA 62.077 66.667 11.47 0.00 35.15 6.09
2838 3389 2.186903 CCGACCTGGTTAGCGCAT 59.813 61.111 11.47 0.00 0.00 4.73
2839 3390 1.440060 CCGACCTGGTTAGCGCATA 59.560 57.895 11.47 0.00 0.00 3.14
2840 3391 0.033504 CCGACCTGGTTAGCGCATAT 59.966 55.000 11.47 0.00 0.00 1.78
2841 3392 1.271379 CCGACCTGGTTAGCGCATATA 59.729 52.381 11.47 0.00 0.00 0.86
2858 3409 6.101997 CGCATATACAGATAGCAAATCCAGA 58.898 40.000 0.00 0.00 0.00 3.86
2873 3424 3.239253 AGACCCTCAAACGCCCGT 61.239 61.111 0.00 0.00 0.00 5.28
2875 3426 3.524648 GACCCTCAAACGCCCGTGA 62.525 63.158 0.00 0.00 0.00 4.35
2877 3428 1.894756 CCCTCAAACGCCCGTGAAA 60.895 57.895 0.00 0.00 0.00 2.69
2881 3432 0.745128 TCAAACGCCCGTGAAAGTGT 60.745 50.000 0.00 0.00 0.00 3.55
2883 3434 0.463116 AAACGCCCGTGAAAGTGTCT 60.463 50.000 0.00 0.00 0.00 3.41
2884 3435 0.878961 AACGCCCGTGAAAGTGTCTC 60.879 55.000 0.00 0.00 0.00 3.36
2885 3436 1.006102 CGCCCGTGAAAGTGTCTCT 60.006 57.895 0.00 0.00 0.00 3.10
2886 3437 0.242825 CGCCCGTGAAAGTGTCTCTA 59.757 55.000 0.00 0.00 0.00 2.43
2888 3439 1.000506 GCCCGTGAAAGTGTCTCTACA 59.999 52.381 0.00 0.00 0.00 2.74
2889 3440 2.353803 GCCCGTGAAAGTGTCTCTACAT 60.354 50.000 0.00 0.00 38.08 2.29
2900 3451 4.201679 TCTACATGTCCGCGGGCG 62.202 66.667 26.87 14.72 39.44 6.13
2933 3484 2.110578 GCCCTATTTGTTGGCTTCCAT 58.889 47.619 0.00 0.00 42.01 3.41
2943 3494 2.499685 GCTTCCATACCCGCGTCT 59.500 61.111 4.92 0.00 0.00 4.18
2944 3495 1.737816 GCTTCCATACCCGCGTCTA 59.262 57.895 4.92 0.00 0.00 2.59
2958 3509 3.366070 CCGCGTCTATCATATCCGAAACT 60.366 47.826 4.92 0.00 0.00 2.66
2988 3539 8.518430 AACAATATAATCCATGCAACACTACA 57.482 30.769 0.00 0.00 0.00 2.74
3009 3560 1.139947 AAAAACGGCCAACACACGG 59.860 52.632 2.24 0.00 0.00 4.94
3049 3603 1.156736 CATCGCCGGACAAAAGAAGT 58.843 50.000 5.05 0.00 0.00 3.01
3081 3644 3.188460 CGGAGTTCAACGACAAATCCATT 59.812 43.478 11.00 0.00 37.78 3.16
3089 3652 7.447374 TCAACGACAAATCCATTCTACAAAT 57.553 32.000 0.00 0.00 0.00 2.32
3155 3720 4.074970 GTGGAAATCACCATTCACTCACT 58.925 43.478 0.00 0.00 42.17 3.41
3157 3722 4.074970 GGAAATCACCATTCACTCACTGT 58.925 43.478 0.00 0.00 0.00 3.55
3246 3813 2.750637 TCGTCGGAGCTGGAGGTC 60.751 66.667 0.00 0.00 41.50 3.85
3260 3827 3.823330 GGTCGAGCCGTCCGTCAT 61.823 66.667 2.39 0.00 0.00 3.06
3378 3952 2.185350 CTTGCCTCGTGCTCCGAT 59.815 61.111 0.00 0.00 46.23 4.18
3383 3957 0.179108 GCCTCGTGCTCCGATAACTT 60.179 55.000 0.00 0.00 46.23 2.66
3424 3998 1.746615 GCATTCTTGCGCTGGAGGA 60.747 57.895 9.73 0.00 39.49 3.71
3425 3999 1.986575 GCATTCTTGCGCTGGAGGAC 61.987 60.000 9.73 0.00 39.49 3.85
3426 4000 1.078143 ATTCTTGCGCTGGAGGACC 60.078 57.895 9.73 0.00 0.00 4.46
3427 4001 1.841302 ATTCTTGCGCTGGAGGACCA 61.841 55.000 9.73 0.00 44.76 4.02
3428 4002 1.841302 TTCTTGCGCTGGAGGACCAT 61.841 55.000 9.73 0.00 45.87 3.55
3429 4003 1.817099 CTTGCGCTGGAGGACCATC 60.817 63.158 9.73 0.00 45.87 3.51
3430 4004 2.526450 CTTGCGCTGGAGGACCATCA 62.526 60.000 9.73 0.00 45.87 3.07
3431 4005 2.512515 GCGCTGGAGGACCATCAC 60.513 66.667 0.00 0.00 45.87 3.06
3432 4006 2.202797 CGCTGGAGGACCATCACG 60.203 66.667 0.00 0.00 45.87 4.35
3433 4007 2.710902 CGCTGGAGGACCATCACGA 61.711 63.158 0.00 0.00 45.87 4.35
3434 4008 1.153549 GCTGGAGGACCATCACGAC 60.154 63.158 0.00 0.00 45.87 4.34
3435 4009 1.888436 GCTGGAGGACCATCACGACA 61.888 60.000 0.00 0.00 45.87 4.35
3436 4010 0.174389 CTGGAGGACCATCACGACAG 59.826 60.000 0.00 0.00 45.87 3.51
3437 4011 1.153549 GGAGGACCATCACGACAGC 60.154 63.158 0.00 0.00 35.97 4.40
3438 4012 1.591703 GAGGACCATCACGACAGCA 59.408 57.895 0.00 0.00 0.00 4.41
3439 4013 0.737715 GAGGACCATCACGACAGCAC 60.738 60.000 0.00 0.00 0.00 4.40
3440 4014 2.094659 GGACCATCACGACAGCACG 61.095 63.158 0.00 0.00 39.31 5.34
3441 4015 1.080772 GACCATCACGACAGCACGA 60.081 57.895 5.12 0.00 37.03 4.35
3442 4016 0.458543 GACCATCACGACAGCACGAT 60.459 55.000 5.12 0.00 37.03 3.73
3443 4017 0.815095 ACCATCACGACAGCACGATA 59.185 50.000 5.12 0.00 37.03 2.92
3444 4018 1.409064 ACCATCACGACAGCACGATAT 59.591 47.619 5.12 0.00 37.03 1.63
3445 4019 2.054363 CCATCACGACAGCACGATATC 58.946 52.381 5.12 0.00 37.03 1.63
3446 4020 1.710773 CATCACGACAGCACGATATCG 59.289 52.381 23.18 23.18 46.33 2.92
3447 4021 0.028902 TCACGACAGCACGATATCGG 59.971 55.000 27.58 17.48 44.95 4.18
3456 4030 2.102357 CGATATCGGGATCGGCCG 59.898 66.667 22.12 22.12 43.99 6.13
3457 4031 2.494918 GATATCGGGATCGGCCGG 59.505 66.667 27.83 8.93 37.63 6.13
3458 4032 3.718210 GATATCGGGATCGGCCGGC 62.718 68.421 27.83 21.18 36.94 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.700846 CCTACATAGTCTACCTACGCATTG 58.299 45.833 0.00 0.00 0.00 2.82
1 2 4.217983 GCCTACATAGTCTACCTACGCATT 59.782 45.833 0.00 0.00 0.00 3.56
2 3 3.757493 GCCTACATAGTCTACCTACGCAT 59.243 47.826 0.00 0.00 0.00 4.73
3 4 3.144506 GCCTACATAGTCTACCTACGCA 58.855 50.000 0.00 0.00 0.00 5.24
5 6 5.762825 TTTGCCTACATAGTCTACCTACG 57.237 43.478 0.00 0.00 0.00 3.51
6 7 9.640963 CATAATTTGCCTACATAGTCTACCTAC 57.359 37.037 0.00 0.00 0.00 3.18
7 8 9.596308 TCATAATTTGCCTACATAGTCTACCTA 57.404 33.333 0.00 0.00 0.00 3.08
9 10 7.332182 GCTCATAATTTGCCTACATAGTCTACC 59.668 40.741 0.00 0.00 0.00 3.18
10 11 7.062371 CGCTCATAATTTGCCTACATAGTCTAC 59.938 40.741 0.00 0.00 0.00 2.59
11 12 7.090808 CGCTCATAATTTGCCTACATAGTCTA 58.909 38.462 0.00 0.00 0.00 2.59
12 13 5.928839 CGCTCATAATTTGCCTACATAGTCT 59.071 40.000 0.00 0.00 0.00 3.24
13 14 5.120830 CCGCTCATAATTTGCCTACATAGTC 59.879 44.000 0.00 0.00 0.00 2.59
14 15 4.997395 CCGCTCATAATTTGCCTACATAGT 59.003 41.667 0.00 0.00 0.00 2.12
15 16 4.997395 ACCGCTCATAATTTGCCTACATAG 59.003 41.667 0.00 0.00 0.00 2.23
16 17 4.968259 ACCGCTCATAATTTGCCTACATA 58.032 39.130 0.00 0.00 0.00 2.29
17 18 3.820557 ACCGCTCATAATTTGCCTACAT 58.179 40.909 0.00 0.00 0.00 2.29
18 19 3.275617 ACCGCTCATAATTTGCCTACA 57.724 42.857 0.00 0.00 0.00 2.74
19 20 4.124238 TGTACCGCTCATAATTTGCCTAC 58.876 43.478 0.00 0.00 0.00 3.18
20 21 4.409718 TGTACCGCTCATAATTTGCCTA 57.590 40.909 0.00 0.00 0.00 3.93
21 22 3.275617 TGTACCGCTCATAATTTGCCT 57.724 42.857 0.00 0.00 0.00 4.75
22 23 4.036262 TCAATGTACCGCTCATAATTTGCC 59.964 41.667 0.00 0.00 0.00 4.52
23 24 5.168526 TCAATGTACCGCTCATAATTTGC 57.831 39.130 0.00 0.00 0.00 3.68
24 25 9.897744 ATTAATCAATGTACCGCTCATAATTTG 57.102 29.630 0.00 0.00 0.00 2.32
25 26 9.897744 CATTAATCAATGTACCGCTCATAATTT 57.102 29.630 0.00 0.00 37.37 1.82
26 27 8.023128 GCATTAATCAATGTACCGCTCATAATT 58.977 33.333 0.00 0.00 43.03 1.40
27 28 7.174772 TGCATTAATCAATGTACCGCTCATAAT 59.825 33.333 0.00 0.00 43.03 1.28
28 29 6.484977 TGCATTAATCAATGTACCGCTCATAA 59.515 34.615 0.00 0.00 43.03 1.90
29 30 5.994668 TGCATTAATCAATGTACCGCTCATA 59.005 36.000 0.00 0.00 43.03 2.15
30 31 4.821260 TGCATTAATCAATGTACCGCTCAT 59.179 37.500 0.00 0.00 43.03 2.90
31 32 4.195416 TGCATTAATCAATGTACCGCTCA 58.805 39.130 0.00 0.00 43.03 4.26
32 33 4.811555 TGCATTAATCAATGTACCGCTC 57.188 40.909 0.00 0.00 43.03 5.03
33 34 6.875948 TTATGCATTAATCAATGTACCGCT 57.124 33.333 3.54 0.00 43.03 5.52
34 35 7.922505 TTTTATGCATTAATCAATGTACCGC 57.077 32.000 3.54 0.00 43.03 5.68
35 36 8.751335 GGTTTTTATGCATTAATCAATGTACCG 58.249 33.333 3.54 0.00 43.03 4.02
36 37 9.816354 AGGTTTTTATGCATTAATCAATGTACC 57.184 29.630 3.54 3.11 43.03 3.34
46 47 9.930158 AGGGAGTATAAGGTTTTTATGCATTAA 57.070 29.630 3.54 0.00 0.00 1.40
47 48 9.569122 GAGGGAGTATAAGGTTTTTATGCATTA 57.431 33.333 3.54 0.00 0.00 1.90
48 49 7.505923 GGAGGGAGTATAAGGTTTTTATGCATT 59.494 37.037 3.54 0.00 0.00 3.56
49 50 7.004691 GGAGGGAGTATAAGGTTTTTATGCAT 58.995 38.462 3.79 3.79 0.00 3.96
50 51 6.069323 TGGAGGGAGTATAAGGTTTTTATGCA 60.069 38.462 0.00 0.00 0.00 3.96
51 52 6.362248 TGGAGGGAGTATAAGGTTTTTATGC 58.638 40.000 0.00 0.00 0.00 3.14
52 53 8.996651 ATTGGAGGGAGTATAAGGTTTTTATG 57.003 34.615 0.00 0.00 0.00 1.90
53 54 7.937394 CGATTGGAGGGAGTATAAGGTTTTTAT 59.063 37.037 0.00 0.00 0.00 1.40
54 55 7.092757 ACGATTGGAGGGAGTATAAGGTTTTTA 60.093 37.037 0.00 0.00 0.00 1.52
55 56 6.120220 CGATTGGAGGGAGTATAAGGTTTTT 58.880 40.000 0.00 0.00 0.00 1.94
56 57 5.191124 ACGATTGGAGGGAGTATAAGGTTTT 59.809 40.000 0.00 0.00 0.00 2.43
57 58 4.720273 ACGATTGGAGGGAGTATAAGGTTT 59.280 41.667 0.00 0.00 0.00 3.27
58 59 4.296056 ACGATTGGAGGGAGTATAAGGTT 58.704 43.478 0.00 0.00 0.00 3.50
59 60 3.924922 ACGATTGGAGGGAGTATAAGGT 58.075 45.455 0.00 0.00 0.00 3.50
60 61 6.607004 AATACGATTGGAGGGAGTATAAGG 57.393 41.667 0.00 0.00 0.00 2.69
62 63 9.938280 CAATTAATACGATTGGAGGGAGTATAA 57.062 33.333 0.00 0.00 32.24 0.98
63 64 9.096823 ACAATTAATACGATTGGAGGGAGTATA 57.903 33.333 0.00 0.00 38.50 1.47
64 65 7.974504 ACAATTAATACGATTGGAGGGAGTAT 58.025 34.615 0.00 0.00 38.50 2.12
65 66 7.070198 TGACAATTAATACGATTGGAGGGAGTA 59.930 37.037 0.00 0.00 38.50 2.59
66 67 6.126883 TGACAATTAATACGATTGGAGGGAGT 60.127 38.462 0.00 0.00 38.50 3.85
67 68 6.288294 TGACAATTAATACGATTGGAGGGAG 58.712 40.000 0.00 0.00 38.50 4.30
68 69 6.241882 TGACAATTAATACGATTGGAGGGA 57.758 37.500 0.00 0.00 38.50 4.20
69 70 6.935741 TTGACAATTAATACGATTGGAGGG 57.064 37.500 0.00 0.00 38.50 4.30
70 71 9.878599 GTTATTGACAATTAATACGATTGGAGG 57.121 33.333 5.89 0.00 38.50 4.30
71 72 9.878599 GGTTATTGACAATTAATACGATTGGAG 57.121 33.333 5.89 0.00 38.50 3.86
72 73 9.621629 AGGTTATTGACAATTAATACGATTGGA 57.378 29.630 5.89 0.00 38.50 3.53
84 85 8.211629 GGATGGACTACTAGGTTATTGACAATT 58.788 37.037 5.89 0.00 0.00 2.32
85 86 7.347222 TGGATGGACTACTAGGTTATTGACAAT 59.653 37.037 5.87 5.87 0.00 2.71
86 87 6.670464 TGGATGGACTACTAGGTTATTGACAA 59.330 38.462 0.00 0.00 0.00 3.18
87 88 6.199376 TGGATGGACTACTAGGTTATTGACA 58.801 40.000 0.00 0.00 0.00 3.58
88 89 6.726490 TGGATGGACTACTAGGTTATTGAC 57.274 41.667 0.00 0.00 0.00 3.18
89 90 6.497259 GGATGGATGGACTACTAGGTTATTGA 59.503 42.308 0.00 0.00 0.00 2.57
90 91 6.270000 TGGATGGATGGACTACTAGGTTATTG 59.730 42.308 0.00 0.00 0.00 1.90
91 92 6.390504 TGGATGGATGGACTACTAGGTTATT 58.609 40.000 0.00 0.00 0.00 1.40
92 93 5.977533 TGGATGGATGGACTACTAGGTTAT 58.022 41.667 0.00 0.00 0.00 1.89
93 94 5.135533 TCTGGATGGATGGACTACTAGGTTA 59.864 44.000 0.00 0.00 0.00 2.85
94 95 4.078571 TCTGGATGGATGGACTACTAGGTT 60.079 45.833 0.00 0.00 0.00 3.50
95 96 3.467483 TCTGGATGGATGGACTACTAGGT 59.533 47.826 0.00 0.00 0.00 3.08
96 97 4.119556 TCTGGATGGATGGACTACTAGG 57.880 50.000 0.00 0.00 0.00 3.02
97 98 6.678568 ATTTCTGGATGGATGGACTACTAG 57.321 41.667 0.00 0.00 0.00 2.57
98 99 7.306013 AGTATTTCTGGATGGATGGACTACTA 58.694 38.462 0.00 0.00 0.00 1.82
99 100 6.146760 AGTATTTCTGGATGGATGGACTACT 58.853 40.000 0.00 0.00 0.00 2.57
100 101 6.426646 AGTATTTCTGGATGGATGGACTAC 57.573 41.667 0.00 0.00 0.00 2.73
101 102 5.243954 CGAGTATTTCTGGATGGATGGACTA 59.756 44.000 0.00 0.00 0.00 2.59
102 103 4.039730 CGAGTATTTCTGGATGGATGGACT 59.960 45.833 0.00 0.00 0.00 3.85
103 104 4.202264 ACGAGTATTTCTGGATGGATGGAC 60.202 45.833 0.00 0.00 0.00 4.02
104 105 3.967326 ACGAGTATTTCTGGATGGATGGA 59.033 43.478 0.00 0.00 0.00 3.41
105 106 4.310769 GACGAGTATTTCTGGATGGATGG 58.689 47.826 0.00 0.00 0.00 3.51
106 107 3.983988 CGACGAGTATTTCTGGATGGATG 59.016 47.826 0.00 0.00 0.00 3.51
107 108 3.005897 CCGACGAGTATTTCTGGATGGAT 59.994 47.826 0.00 0.00 0.00 3.41
108 109 2.361119 CCGACGAGTATTTCTGGATGGA 59.639 50.000 0.00 0.00 0.00 3.41
109 110 2.361119 TCCGACGAGTATTTCTGGATGG 59.639 50.000 0.00 0.00 0.00 3.51
110 111 3.315470 TCTCCGACGAGTATTTCTGGATG 59.685 47.826 0.00 0.00 37.40 3.51
111 112 3.552875 TCTCCGACGAGTATTTCTGGAT 58.447 45.455 0.00 0.00 37.40 3.41
112 113 2.995283 TCTCCGACGAGTATTTCTGGA 58.005 47.619 0.00 0.00 37.40 3.86
113 114 3.128938 AGTTCTCCGACGAGTATTTCTGG 59.871 47.826 0.00 0.00 37.40 3.86
114 115 4.099120 CAGTTCTCCGACGAGTATTTCTG 58.901 47.826 0.00 0.00 37.40 3.02
115 116 4.008330 TCAGTTCTCCGACGAGTATTTCT 58.992 43.478 0.00 0.00 37.40 2.52
116 117 4.352600 TCAGTTCTCCGACGAGTATTTC 57.647 45.455 0.00 0.00 37.40 2.17
117 118 4.778534 TTCAGTTCTCCGACGAGTATTT 57.221 40.909 0.00 0.00 37.40 1.40
118 119 4.778534 TTTCAGTTCTCCGACGAGTATT 57.221 40.909 0.00 0.00 37.40 1.89
119 120 4.496010 CGATTTCAGTTCTCCGACGAGTAT 60.496 45.833 0.00 0.00 37.40 2.12
120 121 3.181513 CGATTTCAGTTCTCCGACGAGTA 60.182 47.826 0.00 0.00 37.40 2.59
121 122 2.414293 CGATTTCAGTTCTCCGACGAGT 60.414 50.000 0.00 0.00 37.40 4.18
122 123 2.159558 TCGATTTCAGTTCTCCGACGAG 60.160 50.000 0.00 0.00 37.48 4.18
123 124 1.808343 TCGATTTCAGTTCTCCGACGA 59.192 47.619 0.00 0.00 0.00 4.20
124 125 2.159558 TCTCGATTTCAGTTCTCCGACG 60.160 50.000 0.00 0.00 0.00 5.12
125 126 3.172824 GTCTCGATTTCAGTTCTCCGAC 58.827 50.000 0.00 0.00 0.00 4.79
126 127 2.159558 CGTCTCGATTTCAGTTCTCCGA 60.160 50.000 0.00 0.00 0.00 4.55
127 128 2.177977 CGTCTCGATTTCAGTTCTCCG 58.822 52.381 0.00 0.00 0.00 4.63
128 129 2.163815 TCCGTCTCGATTTCAGTTCTCC 59.836 50.000 0.00 0.00 0.00 3.71
129 130 3.430931 CTCCGTCTCGATTTCAGTTCTC 58.569 50.000 0.00 0.00 0.00 2.87
130 131 2.164624 CCTCCGTCTCGATTTCAGTTCT 59.835 50.000 0.00 0.00 0.00 3.01
131 132 2.531206 CCTCCGTCTCGATTTCAGTTC 58.469 52.381 0.00 0.00 0.00 3.01
132 133 1.204941 CCCTCCGTCTCGATTTCAGTT 59.795 52.381 0.00 0.00 0.00 3.16
133 134 0.818296 CCCTCCGTCTCGATTTCAGT 59.182 55.000 0.00 0.00 0.00 3.41
134 135 1.066303 CTCCCTCCGTCTCGATTTCAG 59.934 57.143 0.00 0.00 0.00 3.02
135 136 1.103803 CTCCCTCCGTCTCGATTTCA 58.896 55.000 0.00 0.00 0.00 2.69
136 137 1.104630 ACTCCCTCCGTCTCGATTTC 58.895 55.000 0.00 0.00 0.00 2.17
137 138 2.431954 TACTCCCTCCGTCTCGATTT 57.568 50.000 0.00 0.00 0.00 2.17
138 139 2.660670 ATACTCCCTCCGTCTCGATT 57.339 50.000 0.00 0.00 0.00 3.34
139 140 3.072768 AGTTATACTCCCTCCGTCTCGAT 59.927 47.826 0.00 0.00 0.00 3.59
140 141 2.437281 AGTTATACTCCCTCCGTCTCGA 59.563 50.000 0.00 0.00 0.00 4.04
141 142 2.848691 AGTTATACTCCCTCCGTCTCG 58.151 52.381 0.00 0.00 0.00 4.04
142 143 5.827267 ACTAAAGTTATACTCCCTCCGTCTC 59.173 44.000 0.00 0.00 0.00 3.36
143 144 5.764432 ACTAAAGTTATACTCCCTCCGTCT 58.236 41.667 0.00 0.00 0.00 4.18
144 145 6.995091 TCTACTAAAGTTATACTCCCTCCGTC 59.005 42.308 0.00 0.00 0.00 4.79
145 146 6.904626 TCTACTAAAGTTATACTCCCTCCGT 58.095 40.000 0.00 0.00 0.00 4.69
146 147 6.430616 CCTCTACTAAAGTTATACTCCCTCCG 59.569 46.154 0.00 0.00 0.00 4.63
147 148 6.720748 CCCTCTACTAAAGTTATACTCCCTCC 59.279 46.154 0.00 0.00 0.00 4.30
148 149 7.525165 TCCCTCTACTAAAGTTATACTCCCTC 58.475 42.308 0.00 0.00 0.00 4.30
149 150 7.422799 CCTCCCTCTACTAAAGTTATACTCCCT 60.423 44.444 0.00 0.00 0.00 4.20
150 151 6.720748 CCTCCCTCTACTAAAGTTATACTCCC 59.279 46.154 0.00 0.00 0.00 4.30
151 152 7.448161 GTCCTCCCTCTACTAAAGTTATACTCC 59.552 44.444 0.00 0.00 0.00 3.85
152 153 8.219868 AGTCCTCCCTCTACTAAAGTTATACTC 58.780 40.741 0.00 0.00 0.00 2.59
153 154 8.116679 AGTCCTCCCTCTACTAAAGTTATACT 57.883 38.462 0.00 0.00 0.00 2.12
154 155 8.765488 AAGTCCTCCCTCTACTAAAGTTATAC 57.235 38.462 0.00 0.00 0.00 1.47
156 157 9.423964 CTTAAGTCCTCCCTCTACTAAAGTTAT 57.576 37.037 0.00 0.00 0.00 1.89
157 158 8.618385 TCTTAAGTCCTCCCTCTACTAAAGTTA 58.382 37.037 1.63 0.00 0.00 2.24
158 159 7.477008 TCTTAAGTCCTCCCTCTACTAAAGTT 58.523 38.462 1.63 0.00 0.00 2.66
159 160 7.042106 TCTTAAGTCCTCCCTCTACTAAAGT 57.958 40.000 1.63 0.00 0.00 2.66
160 161 9.816787 ATATCTTAAGTCCTCCCTCTACTAAAG 57.183 37.037 1.63 0.00 0.00 1.85
162 163 9.810870 GAATATCTTAAGTCCTCCCTCTACTAA 57.189 37.037 1.63 0.00 0.00 2.24
163 164 8.392479 GGAATATCTTAAGTCCTCCCTCTACTA 58.608 40.741 1.63 0.00 0.00 1.82
164 165 7.243091 GGAATATCTTAAGTCCTCCCTCTACT 58.757 42.308 1.63 0.00 0.00 2.57
165 166 6.438108 GGGAATATCTTAAGTCCTCCCTCTAC 59.562 46.154 19.08 2.56 38.42 2.59
166 167 6.338559 AGGGAATATCTTAAGTCCTCCCTCTA 59.661 42.308 21.46 0.00 46.90 2.43
167 168 5.138821 AGGGAATATCTTAAGTCCTCCCTCT 59.861 44.000 21.46 9.37 46.90 3.69
168 169 5.407936 AGGGAATATCTTAAGTCCTCCCTC 58.592 45.833 21.46 4.23 46.90 4.30
169 170 5.441727 AGGGAATATCTTAAGTCCTCCCT 57.558 43.478 21.46 21.46 45.32 4.20
170 171 5.247337 CAGAGGGAATATCTTAAGTCCTCCC 59.753 48.000 18.88 18.88 39.90 4.30
171 172 5.841783 ACAGAGGGAATATCTTAAGTCCTCC 59.158 44.000 1.63 4.99 39.90 4.30
172 173 6.987403 ACAGAGGGAATATCTTAAGTCCTC 57.013 41.667 1.63 9.96 39.49 3.71
173 174 6.903534 TGAACAGAGGGAATATCTTAAGTCCT 59.096 38.462 1.63 1.87 0.00 3.85
174 175 7.125792 TGAACAGAGGGAATATCTTAAGTCC 57.874 40.000 1.63 1.82 0.00 3.85
175 176 9.620259 AAATGAACAGAGGGAATATCTTAAGTC 57.380 33.333 1.63 0.00 0.00 3.01
176 177 9.981460 AAAATGAACAGAGGGAATATCTTAAGT 57.019 29.630 1.63 0.00 0.00 2.24
185 186 9.190317 GGTCTTATAAAAATGAACAGAGGGAAT 57.810 33.333 0.00 0.00 0.00 3.01
186 187 8.390921 AGGTCTTATAAAAATGAACAGAGGGAA 58.609 33.333 0.00 0.00 0.00 3.97
187 188 7.928873 AGGTCTTATAAAAATGAACAGAGGGA 58.071 34.615 0.00 0.00 0.00 4.20
188 189 7.011482 CGAGGTCTTATAAAAATGAACAGAGGG 59.989 40.741 0.00 0.00 0.00 4.30
189 190 7.764443 TCGAGGTCTTATAAAAATGAACAGAGG 59.236 37.037 0.00 0.00 0.00 3.69
190 191 8.703604 TCGAGGTCTTATAAAAATGAACAGAG 57.296 34.615 0.00 0.00 0.00 3.35
191 192 9.151471 CTTCGAGGTCTTATAAAAATGAACAGA 57.849 33.333 0.00 0.00 0.00 3.41
192 193 9.151471 TCTTCGAGGTCTTATAAAAATGAACAG 57.849 33.333 0.00 0.00 0.00 3.16
193 194 9.151471 CTCTTCGAGGTCTTATAAAAATGAACA 57.849 33.333 0.00 0.00 0.00 3.18
194 195 9.367444 TCTCTTCGAGGTCTTATAAAAATGAAC 57.633 33.333 0.00 0.00 0.00 3.18
203 204 9.404848 TGTCTAAAATCTCTTCGAGGTCTTATA 57.595 33.333 0.00 0.00 0.00 0.98
204 205 8.294954 TGTCTAAAATCTCTTCGAGGTCTTAT 57.705 34.615 0.00 0.00 0.00 1.73
205 206 7.698506 TGTCTAAAATCTCTTCGAGGTCTTA 57.301 36.000 0.00 0.00 0.00 2.10
206 207 6.591750 TGTCTAAAATCTCTTCGAGGTCTT 57.408 37.500 0.00 0.00 0.00 3.01
207 208 6.591750 TTGTCTAAAATCTCTTCGAGGTCT 57.408 37.500 0.00 0.00 0.00 3.85
208 209 6.814146 ACATTGTCTAAAATCTCTTCGAGGTC 59.186 38.462 0.00 0.00 0.00 3.85
209 210 6.591834 CACATTGTCTAAAATCTCTTCGAGGT 59.408 38.462 0.00 0.00 0.00 3.85
210 211 6.456181 GCACATTGTCTAAAATCTCTTCGAGG 60.456 42.308 0.00 0.00 0.00 4.63
211 212 6.091305 TGCACATTGTCTAAAATCTCTTCGAG 59.909 38.462 0.00 0.00 0.00 4.04
212 213 5.931724 TGCACATTGTCTAAAATCTCTTCGA 59.068 36.000 0.00 0.00 0.00 3.71
213 214 6.169419 TGCACATTGTCTAAAATCTCTTCG 57.831 37.500 0.00 0.00 0.00 3.79
214 215 8.694394 GTTTTGCACATTGTCTAAAATCTCTTC 58.306 33.333 9.59 0.00 0.00 2.87
215 216 8.196771 TGTTTTGCACATTGTCTAAAATCTCTT 58.803 29.630 9.59 0.00 0.00 2.85
216 217 7.715657 TGTTTTGCACATTGTCTAAAATCTCT 58.284 30.769 9.59 0.00 0.00 3.10
217 218 7.928908 TGTTTTGCACATTGTCTAAAATCTC 57.071 32.000 9.59 1.71 0.00 2.75
218 219 7.599998 GGATGTTTTGCACATTGTCTAAAATCT 59.400 33.333 9.59 3.33 46.96 2.40
219 220 7.599998 AGGATGTTTTGCACATTGTCTAAAATC 59.400 33.333 9.59 5.93 46.96 2.17
220 221 7.444299 AGGATGTTTTGCACATTGTCTAAAAT 58.556 30.769 9.59 0.00 46.96 1.82
221 222 6.815089 AGGATGTTTTGCACATTGTCTAAAA 58.185 32.000 0.00 4.46 46.96 1.52
222 223 6.403866 AGGATGTTTTGCACATTGTCTAAA 57.596 33.333 0.00 0.00 46.96 1.85
223 224 7.701539 ATAGGATGTTTTGCACATTGTCTAA 57.298 32.000 0.00 0.00 46.96 2.10
224 225 7.701539 AATAGGATGTTTTGCACATTGTCTA 57.298 32.000 0.00 0.00 46.96 2.59
225 226 6.594788 AATAGGATGTTTTGCACATTGTCT 57.405 33.333 0.00 0.00 46.96 3.41
226 227 7.384660 TCAAAATAGGATGTTTTGCACATTGTC 59.615 33.333 6.80 0.00 46.96 3.18
227 228 7.215789 TCAAAATAGGATGTTTTGCACATTGT 58.784 30.769 6.80 0.00 46.96 2.71
228 229 7.599621 TCTCAAAATAGGATGTTTTGCACATTG 59.400 33.333 6.80 0.00 46.96 2.82
229 230 7.669427 TCTCAAAATAGGATGTTTTGCACATT 58.331 30.769 6.80 0.00 46.96 2.71
231 232 6.647334 TCTCAAAATAGGATGTTTTGCACA 57.353 33.333 6.80 0.00 43.04 4.57
232 233 7.092716 ACATCTCAAAATAGGATGTTTTGCAC 58.907 34.615 6.80 0.00 44.93 4.57
233 234 7.230849 ACATCTCAAAATAGGATGTTTTGCA 57.769 32.000 6.80 0.00 44.93 4.08
234 235 6.470235 CGACATCTCAAAATAGGATGTTTTGC 59.530 38.462 8.80 0.00 46.48 3.68
235 236 6.968904 CCGACATCTCAAAATAGGATGTTTTG 59.031 38.462 8.80 5.64 46.48 2.44
236 237 6.884295 TCCGACATCTCAAAATAGGATGTTTT 59.116 34.615 8.80 0.00 46.48 2.43
237 238 6.414732 TCCGACATCTCAAAATAGGATGTTT 58.585 36.000 8.80 0.00 46.48 2.83
238 239 5.989477 TCCGACATCTCAAAATAGGATGTT 58.011 37.500 8.80 0.00 46.48 2.71
240 241 6.510157 CGTTTCCGACATCTCAAAATAGGATG 60.510 42.308 0.00 0.00 41.56 3.51
241 242 5.523916 CGTTTCCGACATCTCAAAATAGGAT 59.476 40.000 0.00 0.00 35.63 3.24
242 243 4.868171 CGTTTCCGACATCTCAAAATAGGA 59.132 41.667 0.00 0.00 35.63 2.94
243 244 4.868171 TCGTTTCCGACATCTCAAAATAGG 59.132 41.667 0.00 0.00 38.40 2.57
257 258 3.044986 CACTTTCGTAAGTCGTTTCCGA 58.955 45.455 4.25 0.00 42.67 4.55
258 259 3.044986 TCACTTTCGTAAGTCGTTTCCG 58.955 45.455 4.25 0.00 42.67 4.30
259 260 4.604697 CGTTCACTTTCGTAAGTCGTTTCC 60.605 45.833 4.25 0.00 42.67 3.13
260 261 4.431340 CGTTCACTTTCGTAAGTCGTTTC 58.569 43.478 4.25 0.00 42.67 2.78
261 262 3.243643 CCGTTCACTTTCGTAAGTCGTTT 59.756 43.478 4.25 0.00 42.67 3.60
262 263 2.791004 CCGTTCACTTTCGTAAGTCGTT 59.209 45.455 4.25 0.00 42.67 3.85
263 264 2.033299 TCCGTTCACTTTCGTAAGTCGT 59.967 45.455 4.25 0.00 42.67 4.34
264 265 2.653890 TCCGTTCACTTTCGTAAGTCG 58.346 47.619 4.25 6.06 42.67 4.18
265 266 2.985139 CCTCCGTTCACTTTCGTAAGTC 59.015 50.000 4.25 0.00 42.67 3.01
266 267 2.288640 CCCTCCGTTCACTTTCGTAAGT 60.289 50.000 1.05 1.05 45.40 2.24
267 268 2.029649 TCCCTCCGTTCACTTTCGTAAG 60.030 50.000 0.00 0.00 37.40 2.34
268 269 1.962807 TCCCTCCGTTCACTTTCGTAA 59.037 47.619 0.00 0.00 0.00 3.18
269 270 1.542915 CTCCCTCCGTTCACTTTCGTA 59.457 52.381 0.00 0.00 0.00 3.43
270 271 0.317479 CTCCCTCCGTTCACTTTCGT 59.683 55.000 0.00 0.00 0.00 3.85
271 272 0.317479 ACTCCCTCCGTTCACTTTCG 59.683 55.000 0.00 0.00 0.00 3.46
272 273 2.561858 AGTACTCCCTCCGTTCACTTTC 59.438 50.000 0.00 0.00 0.00 2.62
273 274 2.606378 AGTACTCCCTCCGTTCACTTT 58.394 47.619 0.00 0.00 0.00 2.66
274 275 2.305858 AGTACTCCCTCCGTTCACTT 57.694 50.000 0.00 0.00 0.00 3.16
275 276 2.305858 AAGTACTCCCTCCGTTCACT 57.694 50.000 0.00 0.00 0.00 3.41
276 277 3.397849 AAAAGTACTCCCTCCGTTCAC 57.602 47.619 0.00 0.00 0.00 3.18
296 297 4.142513 GCAATTTGCCAACTGAACCAAAAA 60.143 37.500 10.34 0.00 37.42 1.94
297 298 3.376546 GCAATTTGCCAACTGAACCAAAA 59.623 39.130 10.34 0.00 37.42 2.44
298 299 2.941720 GCAATTTGCCAACTGAACCAAA 59.058 40.909 10.34 0.00 37.42 3.28
299 300 2.170187 AGCAATTTGCCAACTGAACCAA 59.830 40.909 17.51 0.00 46.52 3.67
300 301 1.761784 AGCAATTTGCCAACTGAACCA 59.238 42.857 17.51 0.00 46.52 3.67
301 302 2.531522 AGCAATTTGCCAACTGAACC 57.468 45.000 17.51 0.00 46.52 3.62
302 303 2.802247 GGAAGCAATTTGCCAACTGAAC 59.198 45.455 17.51 1.54 46.52 3.18
303 304 2.699846 AGGAAGCAATTTGCCAACTGAA 59.300 40.909 17.51 0.00 46.52 3.02
304 305 2.318908 AGGAAGCAATTTGCCAACTGA 58.681 42.857 17.51 0.00 46.52 3.41
305 306 2.803956 CAAGGAAGCAATTTGCCAACTG 59.196 45.455 17.51 5.85 46.52 3.16
306 307 2.224354 CCAAGGAAGCAATTTGCCAACT 60.224 45.455 17.51 10.11 46.52 3.16
307 308 2.145536 CCAAGGAAGCAATTTGCCAAC 58.854 47.619 17.51 8.04 46.52 3.77
316 317 2.363306 TTTCTGAGCCAAGGAAGCAA 57.637 45.000 0.00 0.00 0.00 3.91
370 371 9.166173 TGAATTGGACTATCAAATTAGTGTCTG 57.834 33.333 0.00 0.00 32.59 3.51
394 395 3.960102 AGAAAGATGTGGCCAAAACTTGA 59.040 39.130 18.48 0.00 0.00 3.02
403 404 0.391661 TCGCTCAGAAAGATGTGGCC 60.392 55.000 0.00 0.00 0.00 5.36
409 410 7.734924 TGCATATTAATTCGCTCAGAAAGAT 57.265 32.000 9.42 0.00 42.91 2.40
413 414 7.734924 AAGATGCATATTAATTCGCTCAGAA 57.265 32.000 4.38 0.00 43.93 3.02
415 416 8.688184 CAAAAAGATGCATATTAATTCGCTCAG 58.312 33.333 7.05 0.00 0.00 3.35
436 437 5.741510 CGTGTATTTGTGCAACTCTCAAAAA 59.258 36.000 3.85 0.00 40.29 1.94
437 438 5.163703 ACGTGTATTTGTGCAACTCTCAAAA 60.164 36.000 3.85 0.00 40.29 2.44
438 439 4.334203 ACGTGTATTTGTGCAACTCTCAAA 59.666 37.500 2.35 2.35 40.89 2.69
441 442 4.468095 AACGTGTATTTGTGCAACTCTC 57.532 40.909 0.00 0.00 38.04 3.20
442 443 4.893424 AAACGTGTATTTGTGCAACTCT 57.107 36.364 0.00 0.00 38.04 3.24
443 444 4.611366 GCTAAACGTGTATTTGTGCAACTC 59.389 41.667 0.00 0.00 38.04 3.01
444 445 4.533222 GCTAAACGTGTATTTGTGCAACT 58.467 39.130 0.00 0.00 38.04 3.16
445 446 3.356658 CGCTAAACGTGTATTTGTGCAAC 59.643 43.478 0.00 0.00 36.87 4.17
446 447 3.546617 CGCTAAACGTGTATTTGTGCAA 58.453 40.909 0.00 0.00 36.87 4.08
447 448 2.663334 GCGCTAAACGTGTATTTGTGCA 60.663 45.455 0.00 0.00 46.11 4.57
448 449 1.902504 GCGCTAAACGTGTATTTGTGC 59.097 47.619 0.00 0.00 46.11 4.57
489 490 3.518998 CGGGTGCGATCGAGGACT 61.519 66.667 21.57 0.00 32.80 3.85
494 495 3.515286 GTCCTCGGGTGCGATCGA 61.515 66.667 21.57 0.59 0.00 3.59
495 496 4.907034 CGTCCTCGGGTGCGATCG 62.907 72.222 11.69 11.69 0.00 3.69
496 497 2.938539 CTTCGTCCTCGGGTGCGATC 62.939 65.000 0.00 0.00 37.69 3.69
497 498 3.064987 CTTCGTCCTCGGGTGCGAT 62.065 63.158 0.00 0.00 37.69 4.58
512 513 4.153117 CACATGCTCAAACTGTAGTCCTTC 59.847 45.833 0.00 0.00 0.00 3.46
517 518 2.783135 CCCACATGCTCAAACTGTAGT 58.217 47.619 0.00 0.00 0.00 2.73
522 523 0.467844 TGTGCCCACATGCTCAAACT 60.468 50.000 0.00 0.00 36.21 2.66
562 765 1.944676 CACGGGATCTTCTACGCGC 60.945 63.158 5.73 0.00 44.04 6.86
647 850 4.278513 TTGGTGCTGGGGGTTCCG 62.279 66.667 0.00 0.00 38.76 4.30
747 968 2.888911 GCGCTTATATAGAGGAGGGGGT 60.889 54.545 0.00 0.00 0.00 4.95
748 969 1.757699 GCGCTTATATAGAGGAGGGGG 59.242 57.143 0.00 0.00 0.00 5.40
849 1085 0.384309 CCGCGGTGTAGATCTTGCTA 59.616 55.000 19.50 0.00 0.00 3.49
917 1157 3.314331 CTGGACAGTCGGCCACCT 61.314 66.667 2.24 0.00 0.00 4.00
923 1163 3.775654 GGCTCCCTGGACAGTCGG 61.776 72.222 0.00 0.00 0.00 4.79
952 1194 1.512996 GGGCACTCGGTCGATCGATA 61.513 60.000 22.83 9.21 38.55 2.92
990 1232 2.149973 TGCAGCTCATCTCTCACCTA 57.850 50.000 0.00 0.00 0.00 3.08
991 1233 1.066286 GTTGCAGCTCATCTCTCACCT 60.066 52.381 0.00 0.00 0.00 4.00
992 1234 1.367659 GTTGCAGCTCATCTCTCACC 58.632 55.000 0.00 0.00 0.00 4.02
993 1235 0.997932 CGTTGCAGCTCATCTCTCAC 59.002 55.000 0.00 0.00 0.00 3.51
994 1236 0.108472 CCGTTGCAGCTCATCTCTCA 60.108 55.000 0.00 0.00 0.00 3.27
995 1237 0.809241 CCCGTTGCAGCTCATCTCTC 60.809 60.000 0.00 0.00 0.00 3.20
996 1238 1.220206 CCCGTTGCAGCTCATCTCT 59.780 57.895 0.00 0.00 0.00 3.10
1227 1480 3.857109 AACAATTGCAACGCCGGCC 62.857 57.895 23.46 7.25 0.00 6.13
1228 1481 2.355718 AACAATTGCAACGCCGGC 60.356 55.556 19.07 19.07 0.00 6.13
1229 1482 0.388391 ATGAACAATTGCAACGCCGG 60.388 50.000 0.00 0.00 0.00 6.13
1230 1483 0.984109 GATGAACAATTGCAACGCCG 59.016 50.000 0.00 0.00 0.00 6.46
1231 1484 2.352503 AGATGAACAATTGCAACGCC 57.647 45.000 0.00 0.00 0.00 5.68
1232 1485 3.848019 CACTAGATGAACAATTGCAACGC 59.152 43.478 0.00 0.00 0.00 4.84
1233 1486 4.083324 ACCACTAGATGAACAATTGCAACG 60.083 41.667 0.00 0.00 0.00 4.10
1234 1487 5.376854 ACCACTAGATGAACAATTGCAAC 57.623 39.130 0.00 0.00 0.00 4.17
1235 1488 6.472016 TCTACCACTAGATGAACAATTGCAA 58.528 36.000 5.05 0.00 0.00 4.08
1236 1489 6.048732 TCTACCACTAGATGAACAATTGCA 57.951 37.500 5.05 0.00 0.00 4.08
1269 1522 2.042979 AGCCCATCTGCCCTTCTAAAAA 59.957 45.455 0.00 0.00 0.00 1.94
1270 1523 1.640670 AGCCCATCTGCCCTTCTAAAA 59.359 47.619 0.00 0.00 0.00 1.52
1299 1552 1.203523 AGCTGTTTTGTGTTTTCCGCA 59.796 42.857 0.00 0.00 0.00 5.69
1364 1617 7.888424 TGTACTGTAGTGCACTAAACTAATCA 58.112 34.615 27.61 17.51 35.76 2.57
1424 1677 5.255687 TGTACTGATCACCGAGGTAGTAAA 58.744 41.667 4.69 0.00 0.00 2.01
1425 1678 4.847198 TGTACTGATCACCGAGGTAGTAA 58.153 43.478 4.69 0.00 0.00 2.24
1426 1679 4.492494 TGTACTGATCACCGAGGTAGTA 57.508 45.455 0.00 0.00 0.00 1.82
1427 1680 3.361281 TGTACTGATCACCGAGGTAGT 57.639 47.619 0.00 0.00 0.00 2.73
1428 1681 3.181489 GGTTGTACTGATCACCGAGGTAG 60.181 52.174 0.00 0.00 0.00 3.18
1477 1730 3.120616 GCGATGGGTTTTTAACTTTTCGC 59.879 43.478 13.24 13.24 40.92 4.70
1508 1761 4.250464 GGGTAACATTGTTCATCGAGACA 58.750 43.478 5.07 0.00 39.74 3.41
1515 1768 3.091545 CTGCCTGGGTAACATTGTTCAT 58.908 45.455 5.07 0.00 39.74 2.57
1545 1798 7.459795 TCATAGATAGGTCATGTCTAAGCTG 57.540 40.000 0.00 0.00 35.51 4.24
1627 1884 2.273449 CCAGTCTGACCCATGGGC 59.727 66.667 31.73 22.77 39.32 5.36
1649 1906 2.853731 TCTCTGCTTTAGCGAGCTAC 57.146 50.000 4.05 0.00 45.83 3.58
1655 1912 5.962423 GCTAAAAAGATTCTCTGCTTTAGCG 59.038 40.000 18.46 0.00 42.38 4.26
1952 2455 1.673033 GCTGCACCAGTAAGACGACAT 60.673 52.381 0.00 0.00 33.43 3.06
1956 2459 0.320771 AAGGCTGCACCAGTAAGACG 60.321 55.000 0.50 0.00 43.14 4.18
1959 2462 1.537202 GAACAAGGCTGCACCAGTAAG 59.463 52.381 0.50 0.00 43.14 2.34
1963 2466 2.620112 CGGAACAAGGCTGCACCAG 61.620 63.158 0.50 3.16 43.14 4.00
2180 2684 2.032681 GAGGAGCTGCCGGTGTTT 59.967 61.111 1.90 0.00 43.43 2.83
2317 2830 2.579787 GGTCCAGATCGCACGACG 60.580 66.667 0.00 0.00 45.62 5.12
2327 2840 1.979155 CGTCAGGCAGAGGTCCAGA 60.979 63.158 0.00 0.00 0.00 3.86
2390 2903 0.035881 TCGTGGTGGAGTACTCGTCT 59.964 55.000 16.56 0.00 0.00 4.18
2483 2996 5.238650 GCACAATTACAGTTTACACTCAGGT 59.761 40.000 0.00 0.00 0.00 4.00
2524 3037 4.461081 GCAACTAATTAATCACCACCCACA 59.539 41.667 0.00 0.00 0.00 4.17
2598 3111 3.804325 CGCTAGAACATGGATCGAACATT 59.196 43.478 0.00 0.00 0.00 2.71
2599 3112 3.384668 CGCTAGAACATGGATCGAACAT 58.615 45.455 0.00 0.00 0.00 2.71
2636 3149 4.386049 AGAAACGATTTGTTAGCTGACTCG 59.614 41.667 14.56 14.56 40.84 4.18
2698 3211 7.312899 CACAACATGATACTCCTATATGCGTA 58.687 38.462 0.00 0.00 0.00 4.42
2806 3357 0.394352 GTCGGGTGGCCATTGAAGAT 60.394 55.000 9.72 0.00 0.00 2.40
2818 3369 2.125673 CGCTAACCAGGTCGGGTG 60.126 66.667 0.00 0.00 41.32 4.61
2823 3374 3.005472 TCTGTATATGCGCTAACCAGGTC 59.995 47.826 9.73 0.00 0.00 3.85
2824 3375 2.963101 TCTGTATATGCGCTAACCAGGT 59.037 45.455 9.73 0.00 0.00 4.00
2834 3385 6.035435 GTCTGGATTTGCTATCTGTATATGCG 59.965 42.308 0.00 0.00 0.00 4.73
2835 3386 6.314896 GGTCTGGATTTGCTATCTGTATATGC 59.685 42.308 0.00 0.00 0.00 3.14
2836 3387 6.820656 GGGTCTGGATTTGCTATCTGTATATG 59.179 42.308 0.00 0.00 0.00 1.78
2837 3388 6.732862 AGGGTCTGGATTTGCTATCTGTATAT 59.267 38.462 0.00 0.00 0.00 0.86
2838 3389 6.084738 AGGGTCTGGATTTGCTATCTGTATA 58.915 40.000 0.00 0.00 0.00 1.47
2839 3390 4.910304 AGGGTCTGGATTTGCTATCTGTAT 59.090 41.667 0.00 0.00 0.00 2.29
2840 3391 4.298626 AGGGTCTGGATTTGCTATCTGTA 58.701 43.478 0.00 0.00 0.00 2.74
2841 3392 3.118531 AGGGTCTGGATTTGCTATCTGT 58.881 45.455 0.00 0.00 0.00 3.41
2858 3409 2.612095 TTTCACGGGCGTTTGAGGGT 62.612 55.000 0.00 0.00 0.00 4.34
2873 3424 3.614150 GCGGACATGTAGAGACACTTTCA 60.614 47.826 0.00 0.00 38.76 2.69
2875 3426 2.671351 CGCGGACATGTAGAGACACTTT 60.671 50.000 0.00 0.00 38.76 2.66
2877 3428 0.452184 CGCGGACATGTAGAGACACT 59.548 55.000 0.00 0.00 38.76 3.55
2881 3432 2.782222 GCCCGCGGACATGTAGAGA 61.782 63.158 30.73 0.00 0.00 3.10
2883 3434 4.201679 CGCCCGCGGACATGTAGA 62.202 66.667 30.73 0.00 35.56 2.59
2909 3460 2.562125 GCCAACAAATAGGGCGTGA 58.438 52.632 0.00 0.00 38.04 4.35
2933 3484 2.011947 CGGATATGATAGACGCGGGTA 58.988 52.381 12.47 0.68 0.00 3.69
2997 3548 0.889186 ATGAACTCCGTGTGTTGGCC 60.889 55.000 0.00 0.00 0.00 5.36
2998 3549 0.517316 GATGAACTCCGTGTGTTGGC 59.483 55.000 0.00 0.00 0.00 4.52
3009 3560 5.801350 TGAAATGTTGATCCGATGAACTC 57.199 39.130 11.36 2.80 0.00 3.01
3049 3603 5.124297 TGTCGTTGAACTCCGATGAACTATA 59.876 40.000 0.00 0.00 35.30 1.31
3103 3668 8.253113 CCTTGCCTGTTCTGTTTATATTTCAAT 58.747 33.333 0.00 0.00 0.00 2.57
3106 3671 7.251281 GTCCTTGCCTGTTCTGTTTATATTTC 58.749 38.462 0.00 0.00 0.00 2.17
3148 3713 1.679898 GGGAAGGGGACAGTGAGTG 59.320 63.158 0.00 0.00 0.00 3.51
3149 3714 1.539124 GGGGAAGGGGACAGTGAGT 60.539 63.158 0.00 0.00 0.00 3.41
3155 3720 1.541368 CCAGAAGGGGAAGGGGACA 60.541 63.158 0.00 0.00 0.00 4.02
3157 3722 2.614013 GCCAGAAGGGGAAGGGGA 60.614 66.667 0.00 0.00 37.04 4.81
3187 3752 2.558554 CTACACGGAGGAAGGGCACG 62.559 65.000 0.00 0.00 0.00 5.34
3216 3783 4.634133 GACGACGACGCACCACCA 62.634 66.667 7.30 0.00 43.96 4.17
3246 3813 2.579787 GACATGACGGACGGCTCG 60.580 66.667 0.00 0.00 0.00 5.03
3342 3910 4.329545 AAGGAGGCGGCAGCGAAA 62.330 61.111 13.08 0.00 46.35 3.46
3378 3952 1.134367 CTCCGACTCGCCATCAAGTTA 59.866 52.381 0.00 0.00 0.00 2.24
3383 3957 2.885113 CACTCCGACTCGCCATCA 59.115 61.111 0.00 0.00 0.00 3.07
3424 3998 0.815095 TATCGTGCTGTCGTGATGGT 59.185 50.000 0.00 0.00 0.00 3.55
3425 3999 2.054363 GATATCGTGCTGTCGTGATGG 58.946 52.381 0.00 0.00 0.00 3.51
3426 4000 1.710773 CGATATCGTGCTGTCGTGATG 59.289 52.381 17.06 0.00 34.11 3.07
3427 4001 1.335051 CCGATATCGTGCTGTCGTGAT 60.335 52.381 22.81 0.00 37.74 3.06
3428 4002 0.028902 CCGATATCGTGCTGTCGTGA 59.971 55.000 22.81 0.00 37.74 4.35
3429 4003 0.934901 CCCGATATCGTGCTGTCGTG 60.935 60.000 22.81 4.97 37.74 4.35
3430 4004 1.099295 TCCCGATATCGTGCTGTCGT 61.099 55.000 22.81 0.00 37.74 4.34
3431 4005 0.241213 ATCCCGATATCGTGCTGTCG 59.759 55.000 22.81 6.36 37.74 4.35
3432 4006 1.729472 CGATCCCGATATCGTGCTGTC 60.729 57.143 22.81 12.18 42.93 3.51
3433 4007 0.241213 CGATCCCGATATCGTGCTGT 59.759 55.000 22.81 5.08 42.93 4.40
3434 4008 0.456824 CCGATCCCGATATCGTGCTG 60.457 60.000 22.81 8.12 45.72 4.41
3435 4009 1.883732 CCGATCCCGATATCGTGCT 59.116 57.895 22.81 3.83 45.72 4.40
3436 4010 1.805945 GCCGATCCCGATATCGTGC 60.806 63.158 22.81 11.57 45.72 5.34
3437 4011 1.153823 GGCCGATCCCGATATCGTG 60.154 63.158 22.81 12.82 45.72 4.35
3438 4012 3.285371 GGCCGATCCCGATATCGT 58.715 61.111 22.81 5.37 45.72 3.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.