Multiple sequence alignment - TraesCS4B01G043300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G043300 chr4B 100.000 2782 0 0 1 2782 31681275 31684056 0.000000e+00 5138.0
1 TraesCS4B01G043300 chr4B 91.768 328 25 1 166 491 483097623 483097950 3.270000e-124 455.0
2 TraesCS4B01G043300 chr4B 89.815 324 32 1 169 491 78615476 78615799 5.540000e-112 414.0
3 TraesCS4B01G043300 chr4A 90.696 1881 75 46 547 2369 581918062 581916224 0.000000e+00 2412.0
4 TraesCS4B01G043300 chr4D 89.304 1795 80 40 520 2250 19290477 19292223 0.000000e+00 2148.0
5 TraesCS4B01G043300 chr4D 77.273 286 55 6 2506 2782 335309511 335309227 2.870000e-35 159.0
6 TraesCS4B01G043300 chr4D 87.719 57 3 2 2307 2363 19292224 19292276 2.310000e-06 63.9
7 TraesCS4B01G043300 chr7B 91.843 331 25 1 166 494 721497472 721497142 7.020000e-126 460.0
8 TraesCS4B01G043300 chr2B 92.049 327 24 1 166 490 544224564 544224890 2.530000e-125 459.0
9 TraesCS4B01G043300 chr2B 91.743 327 25 1 166 490 544641158 544641484 1.170000e-123 453.0
10 TraesCS4B01G043300 chr2B 90.520 327 24 5 168 490 150586544 150586221 2.560000e-115 425.0
11 TraesCS4B01G043300 chr2B 89.091 330 28 6 167 491 694693465 694693139 1.200000e-108 403.0
12 TraesCS4B01G043300 chr2B 80.737 353 53 10 2445 2782 513249666 513250018 7.640000e-66 261.0
13 TraesCS4B01G043300 chr5B 91.463 328 26 1 166 491 643150378 643150705 1.520000e-122 449.0
14 TraesCS4B01G043300 chr5B 90.549 328 29 1 166 491 680663970 680664297 1.530000e-117 433.0
15 TraesCS4B01G043300 chr5B 92.614 176 6 1 1 169 680663329 680663504 2.140000e-61 246.0
16 TraesCS4B01G043300 chr5B 91.329 173 9 1 1 167 643149979 643150151 5.990000e-57 231.0
17 TraesCS4B01G043300 chr5B 90.230 174 12 1 1 169 515403190 515403017 3.610000e-54 222.0
18 TraesCS4B01G043300 chr5B 89.535 172 14 2 1 169 419774304 419774134 6.030000e-52 215.0
19 TraesCS4B01G043300 chr5B 76.685 356 53 16 2442 2782 535148005 535148345 1.320000e-38 171.0
20 TraesCS4B01G043300 chr1B 92.045 176 7 1 1 169 109693969 109693794 9.960000e-60 241.0
21 TraesCS4B01G043300 chr1B 90.341 176 9 2 1 169 600666449 600666275 1.000000e-54 224.0
22 TraesCS4B01G043300 chr3B 91.329 173 11 1 1 169 435868887 435869059 1.670000e-57 233.0
23 TraesCS4B01G043300 chr6B 90.116 172 10 1 1 165 140718834 140719005 1.680000e-52 217.0
24 TraesCS4B01G043300 chr3D 77.966 354 58 15 2446 2782 604656526 604656876 1.310000e-48 204.0
25 TraesCS4B01G043300 chr3D 77.193 171 27 11 2443 2604 612882353 612882186 3.820000e-14 89.8
26 TraesCS4B01G043300 chr7D 87.500 168 18 2 2618 2782 59870197 59870364 1.020000e-44 191.0
27 TraesCS4B01G043300 chr2A 85.380 171 19 4 1 166 376087004 376087173 3.680000e-39 172.0
28 TraesCS4B01G043300 chr2A 77.512 209 36 10 2465 2663 257786354 257786147 6.300000e-22 115.0
29 TraesCS4B01G043300 chr6A 85.455 165 20 4 1 163 71058885 71059047 4.770000e-38 169.0
30 TraesCS4B01G043300 chr6A 74.719 356 72 10 2444 2782 453555561 453555207 2.890000e-30 143.0
31 TraesCS4B01G043300 chrUn 76.687 326 59 12 2465 2782 109023833 109024149 6.160000e-37 165.0
32 TraesCS4B01G043300 chr1A 81.773 203 29 5 2587 2782 251580387 251580588 2.220000e-36 163.0
33 TraesCS4B01G043300 chr3A 82.635 167 22 6 1 163 50934501 50934338 1.040000e-29 141.0
34 TraesCS4B01G043300 chr3A 74.890 227 44 11 2444 2660 595069520 595069743 1.060000e-14 91.6
35 TraesCS4B01G043300 chr2D 81.356 177 29 3 2610 2782 37618101 37618277 1.040000e-29 141.0
36 TraesCS4B01G043300 chr5D 76.543 243 44 10 2433 2663 386177954 386177713 1.350000e-23 121.0
37 TraesCS4B01G043300 chr5A 73.952 334 72 11 2462 2782 644871698 644872029 1.350000e-23 121.0
38 TraesCS4B01G043300 chr5A 79.710 138 24 4 2469 2603 139072511 139072647 2.280000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G043300 chr4B 31681275 31684056 2781 False 5138.00 5138 100.0000 1 2782 1 chr4B.!!$F1 2781
1 TraesCS4B01G043300 chr4A 581916224 581918062 1838 True 2412.00 2412 90.6960 547 2369 1 chr4A.!!$R1 1822
2 TraesCS4B01G043300 chr4D 19290477 19292276 1799 False 1105.95 2148 88.5115 520 2363 2 chr4D.!!$F1 1843
3 TraesCS4B01G043300 chr5B 643149979 643150705 726 False 340.00 449 91.3960 1 491 2 chr5B.!!$F2 490
4 TraesCS4B01G043300 chr5B 680663329 680664297 968 False 339.50 433 91.5815 1 491 2 chr5B.!!$F3 490

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
721 1224 0.320771 CCGTGAGCTAGCCAACAAGT 60.321 55.0 12.13 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2667 3245 0.032267 GACCGAATCCCACGAGATCC 59.968 60.0 0.0 0.0 0.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 72 8.646004 ACATAGATAGTTCTTGCATACACAGAT 58.354 33.333 0.00 0.00 33.17 2.90
121 129 1.475682 GTAATGTCCTCCTCCGACGTT 59.524 52.381 0.00 0.00 41.28 3.99
225 702 0.404040 CTAGAGAGAGGGGGCGAGAT 59.596 60.000 0.00 0.00 0.00 2.75
258 735 1.538204 GCGACAAACTGAGTGTGGAGA 60.538 52.381 7.80 0.00 0.00 3.71
262 739 3.034635 ACAAACTGAGTGTGGAGAGAGT 58.965 45.455 7.80 0.00 0.00 3.24
264 741 2.373335 ACTGAGTGTGGAGAGAGTGT 57.627 50.000 0.00 0.00 0.00 3.55
326 803 2.399611 CGAACATTTCCCGCGCTC 59.600 61.111 5.56 0.00 0.00 5.03
371 850 3.505184 CGAATTTCCCCCGTGCCG 61.505 66.667 0.00 0.00 0.00 5.69
440 919 1.721487 CGCGGTCATGAAATGGGTC 59.279 57.895 0.00 0.00 46.73 4.46
476 955 3.372822 CGCTGCCGACCTAAATCTAAAAA 59.627 43.478 0.00 0.00 36.29 1.94
498 977 3.031457 CGGACGACGGTCGCAAAA 61.031 61.111 28.67 0.00 45.12 2.44
499 978 2.851104 GGACGACGGTCGCAAAAG 59.149 61.111 28.67 3.72 45.12 2.27
500 979 1.662446 GGACGACGGTCGCAAAAGA 60.662 57.895 28.67 0.00 45.12 2.52
501 980 1.485943 GACGACGGTCGCAAAAGAC 59.514 57.895 28.67 9.10 45.12 3.01
502 981 2.194591 GACGACGGTCGCAAAAGACG 62.195 60.000 28.67 4.52 45.12 4.18
503 982 2.851104 GACGGTCGCAAAAGACGG 59.149 61.111 0.00 3.67 44.01 4.79
504 983 1.662446 GACGGTCGCAAAAGACGGA 60.662 57.895 10.79 0.00 41.96 4.69
505 984 1.883725 GACGGTCGCAAAAGACGGAC 61.884 60.000 10.79 2.43 41.96 4.79
506 985 1.952133 CGGTCGCAAAAGACGGACA 60.952 57.895 0.00 0.00 41.96 4.02
507 986 1.492319 CGGTCGCAAAAGACGGACAA 61.492 55.000 0.00 0.00 41.96 3.18
508 987 0.658897 GGTCGCAAAAGACGGACAAA 59.341 50.000 0.00 0.00 41.81 2.83
509 988 1.064357 GGTCGCAAAAGACGGACAAAA 59.936 47.619 0.00 0.00 41.81 2.44
510 989 2.478200 GGTCGCAAAAGACGGACAAAAA 60.478 45.455 0.00 0.00 41.81 1.94
511 990 2.528688 GTCGCAAAAGACGGACAAAAAC 59.471 45.455 0.00 0.00 0.00 2.43
512 991 2.161808 TCGCAAAAGACGGACAAAAACA 59.838 40.909 0.00 0.00 0.00 2.83
513 992 2.277834 CGCAAAAGACGGACAAAAACAC 59.722 45.455 0.00 0.00 0.00 3.32
514 993 2.601314 GCAAAAGACGGACAAAAACACC 59.399 45.455 0.00 0.00 0.00 4.16
525 1004 1.132643 CAAAAACACCGTCCGTTTGGA 59.867 47.619 0.00 0.00 43.88 3.53
534 1013 1.991167 TCCGTTTGGATAGCCCCGT 60.991 57.895 0.00 0.00 40.17 5.28
537 1016 1.373590 CGTTTGGATAGCCCCGTTGG 61.374 60.000 0.00 0.00 37.09 3.77
540 1019 0.912487 TTGGATAGCCCCGTTGGAGT 60.912 55.000 0.00 0.00 35.39 3.85
548 1027 0.323629 CCCCGTTGGAGTTGCTCTAA 59.676 55.000 0.00 0.00 35.39 2.10
639 1136 3.536917 TCGCCGGCTGGATCGATT 61.537 61.111 26.68 0.00 37.49 3.34
721 1224 0.320771 CCGTGAGCTAGCCAACAAGT 60.321 55.000 12.13 0.00 0.00 3.16
774 1277 4.740822 GCACCCGCACCCCATCTT 62.741 66.667 0.00 0.00 38.36 2.40
777 1280 2.438434 CCCGCACCCCATCTTCAC 60.438 66.667 0.00 0.00 0.00 3.18
778 1281 2.438434 CCGCACCCCATCTTCACC 60.438 66.667 0.00 0.00 0.00 4.02
782 1286 1.930656 CACCCCATCTTCACCCCCT 60.931 63.158 0.00 0.00 0.00 4.79
908 1423 4.373116 GAGAACGACGGCAGGGCA 62.373 66.667 0.00 0.00 0.00 5.36
964 1482 2.169974 CGTCTCGATCGACACAAAGAG 58.830 52.381 21.01 7.27 33.54 2.85
965 1483 2.159693 CGTCTCGATCGACACAAAGAGA 60.160 50.000 21.01 9.40 33.54 3.10
966 1484 3.421741 GTCTCGATCGACACAAAGAGAG 58.578 50.000 15.15 0.13 35.71 3.20
967 1485 2.420372 TCTCGATCGACACAAAGAGAGG 59.580 50.000 15.15 0.00 31.93 3.69
1008 1529 1.531739 TTTTGAAGGGGATGGCGCAC 61.532 55.000 10.83 0.00 0.00 5.34
1172 1693 3.604198 GCACGATCTACGCATGTACTATG 59.396 47.826 0.00 0.00 46.94 2.23
1176 1697 4.154375 CGATCTACGCATGTACTATGACCT 59.846 45.833 8.81 0.00 34.51 3.85
1177 1698 5.350640 CGATCTACGCATGTACTATGACCTA 59.649 44.000 8.81 0.00 34.51 3.08
1178 1699 6.455780 CGATCTACGCATGTACTATGACCTAG 60.456 46.154 8.81 0.00 34.51 3.02
1230 1759 3.602390 TGCTTTGCTTTGTCGACTAAC 57.398 42.857 17.92 10.50 0.00 2.34
1331 1861 3.126722 GAGTACGCACGCGCATCAC 62.127 63.158 12.02 4.77 44.19 3.06
1372 1902 7.241042 AGAACTTAGAAGTAACTGCATGGTA 57.759 36.000 0.00 0.00 38.57 3.25
1379 1909 2.567169 AGTAACTGCATGGTAGCTCACA 59.433 45.455 0.00 0.00 34.99 3.58
1385 1915 0.817654 CATGGTAGCTCACACCGAGA 59.182 55.000 0.00 0.00 45.45 4.04
1556 2087 2.368311 ACGTACCCCAACAACCAATT 57.632 45.000 0.00 0.00 0.00 2.32
1796 2327 3.228453 GCCCTAGCTACATAGTACCACA 58.772 50.000 0.00 0.00 35.50 4.17
1978 2534 0.591741 CACGGGCTAAGATCGACGAC 60.592 60.000 0.00 0.00 0.00 4.34
2075 2651 0.788391 GGTTCGTCTTTGCCTACACG 59.212 55.000 0.00 0.00 0.00 4.49
2076 2652 0.163146 GTTCGTCTTTGCCTACACGC 59.837 55.000 0.00 0.00 32.21 5.34
2083 2659 0.451383 TTTGCCTACACGCATCATGC 59.549 50.000 0.00 0.00 38.87 4.06
2084 2660 1.375853 TTGCCTACACGCATCATGCC 61.376 55.000 3.38 0.00 41.12 4.40
2092 2668 2.515523 GCATCATGCCCAGCTCGT 60.516 61.111 0.00 0.00 37.42 4.18
2093 2669 1.227645 GCATCATGCCCAGCTCGTA 60.228 57.895 0.00 0.00 37.42 3.43
2094 2670 1.502163 GCATCATGCCCAGCTCGTAC 61.502 60.000 0.00 0.00 37.42 3.67
2095 2671 1.068083 ATCATGCCCAGCTCGTACG 59.932 57.895 9.53 9.53 0.00 3.67
2096 2672 2.978452 ATCATGCCCAGCTCGTACGC 62.978 60.000 11.24 0.00 0.00 4.42
2125 2701 7.428020 GTGTTCATGTCATGCATAATTGGTAT 58.572 34.615 8.03 0.00 35.74 2.73
2126 2702 8.567104 GTGTTCATGTCATGCATAATTGGTATA 58.433 33.333 8.03 0.00 35.74 1.47
2127 2703 8.567104 TGTTCATGTCATGCATAATTGGTATAC 58.433 33.333 8.03 0.00 35.74 1.47
2128 2704 8.786898 GTTCATGTCATGCATAATTGGTATACT 58.213 33.333 8.03 0.00 35.74 2.12
2188 2766 6.863126 TGAATTTTGCTGCTTAAAGCTACTTC 59.137 34.615 0.00 3.44 42.97 3.01
2219 2797 6.500336 TGGGGGTAATCTATAGATCAGTACC 58.500 44.000 23.14 23.14 35.88 3.34
2250 2828 9.863845 TTTGTGTCGTCTGAATTATGTATAGAA 57.136 29.630 0.00 0.00 0.00 2.10
2252 2830 8.463607 TGTGTCGTCTGAATTATGTATAGAACA 58.536 33.333 0.00 0.00 43.86 3.18
2321 2899 1.337821 CGACGCCTTTCAGAGTGTAC 58.662 55.000 0.00 0.00 0.00 2.90
2327 2905 1.071605 CTTTCAGAGTGTACGGCTGC 58.928 55.000 0.00 0.00 0.00 5.25
2328 2906 0.320421 TTTCAGAGTGTACGGCTGCC 60.320 55.000 9.11 9.11 0.00 4.85
2357 2935 7.410513 GGTTCGATCTGCATATAACGTGATTAC 60.411 40.741 0.00 0.00 0.00 1.89
2363 2941 7.406553 TCTGCATATAACGTGATTACTTTTGC 58.593 34.615 0.00 0.00 0.00 3.68
2365 2943 6.964370 TGCATATAACGTGATTACTTTTGCAC 59.036 34.615 0.00 0.00 0.00 4.57
2369 2947 4.624336 ACGTGATTACTTTTGCACACAA 57.376 36.364 0.00 0.00 0.00 3.33
2370 2948 5.181690 ACGTGATTACTTTTGCACACAAT 57.818 34.783 0.00 0.00 35.21 2.71
2371 2949 5.212194 ACGTGATTACTTTTGCACACAATC 58.788 37.500 0.00 0.00 35.21 2.67
2372 2950 4.318071 CGTGATTACTTTTGCACACAATCG 59.682 41.667 0.00 0.00 35.21 3.34
2373 2951 5.212194 GTGATTACTTTTGCACACAATCGT 58.788 37.500 0.00 0.00 35.21 3.73
2374 2952 5.685511 GTGATTACTTTTGCACACAATCGTT 59.314 36.000 0.00 0.00 35.21 3.85
2375 2953 6.198216 GTGATTACTTTTGCACACAATCGTTT 59.802 34.615 0.00 0.00 35.21 3.60
2376 2954 6.754209 TGATTACTTTTGCACACAATCGTTTT 59.246 30.769 0.00 0.00 35.21 2.43
2377 2955 6.561945 TTACTTTTGCACACAATCGTTTTC 57.438 33.333 0.00 0.00 35.21 2.29
2378 2956 4.743493 ACTTTTGCACACAATCGTTTTCT 58.257 34.783 0.00 0.00 35.21 2.52
2379 2957 5.167845 ACTTTTGCACACAATCGTTTTCTT 58.832 33.333 0.00 0.00 35.21 2.52
2380 2958 5.637387 ACTTTTGCACACAATCGTTTTCTTT 59.363 32.000 0.00 0.00 35.21 2.52
2381 2959 5.694674 TTTGCACACAATCGTTTTCTTTC 57.305 34.783 0.00 0.00 35.21 2.62
2382 2960 4.630894 TGCACACAATCGTTTTCTTTCT 57.369 36.364 0.00 0.00 0.00 2.52
2383 2961 4.992688 TGCACACAATCGTTTTCTTTCTT 58.007 34.783 0.00 0.00 0.00 2.52
2384 2962 5.406649 TGCACACAATCGTTTTCTTTCTTT 58.593 33.333 0.00 0.00 0.00 2.52
2385 2963 6.556212 TGCACACAATCGTTTTCTTTCTTTA 58.444 32.000 0.00 0.00 0.00 1.85
2386 2964 6.690957 TGCACACAATCGTTTTCTTTCTTTAG 59.309 34.615 0.00 0.00 0.00 1.85
2387 2965 6.910433 GCACACAATCGTTTTCTTTCTTTAGA 59.090 34.615 0.00 0.00 0.00 2.10
2388 2966 7.112148 GCACACAATCGTTTTCTTTCTTTAGAG 59.888 37.037 0.00 0.00 0.00 2.43
2389 2967 8.335356 CACACAATCGTTTTCTTTCTTTAGAGA 58.665 33.333 0.00 0.00 0.00 3.10
2390 2968 8.889717 ACACAATCGTTTTCTTTCTTTAGAGAA 58.110 29.630 0.00 0.00 40.07 2.87
2391 2969 9.716507 CACAATCGTTTTCTTTCTTTAGAGAAA 57.283 29.630 8.08 8.08 46.77 2.52
2403 2981 5.552178 TCTTTAGAGAAAGGACTCTTTGGC 58.448 41.667 0.00 0.00 43.62 4.52
2404 2982 5.308237 TCTTTAGAGAAAGGACTCTTTGGCT 59.692 40.000 0.00 0.00 43.62 4.75
2405 2983 6.497259 TCTTTAGAGAAAGGACTCTTTGGCTA 59.503 38.462 0.00 0.00 43.62 3.93
2406 2984 4.817318 AGAGAAAGGACTCTTTGGCTAG 57.183 45.455 0.00 0.00 43.62 3.42
2407 2985 3.517500 AGAGAAAGGACTCTTTGGCTAGG 59.482 47.826 0.00 0.00 43.62 3.02
2408 2986 3.252351 AGAAAGGACTCTTTGGCTAGGT 58.748 45.455 0.00 0.00 42.72 3.08
2409 2987 3.653352 AGAAAGGACTCTTTGGCTAGGTT 59.347 43.478 0.00 0.00 42.72 3.50
2410 2988 4.104897 AGAAAGGACTCTTTGGCTAGGTTT 59.895 41.667 0.00 0.00 42.72 3.27
2411 2989 3.704800 AGGACTCTTTGGCTAGGTTTC 57.295 47.619 0.00 0.00 0.00 2.78
2412 2990 3.252351 AGGACTCTTTGGCTAGGTTTCT 58.748 45.455 0.00 0.00 0.00 2.52
2413 2991 3.262151 AGGACTCTTTGGCTAGGTTTCTC 59.738 47.826 0.00 0.00 0.00 2.87
2414 2992 3.262151 GGACTCTTTGGCTAGGTTTCTCT 59.738 47.826 0.00 0.00 0.00 3.10
2415 2993 4.263112 GGACTCTTTGGCTAGGTTTCTCTT 60.263 45.833 0.00 0.00 0.00 2.85
2416 2994 5.309638 GACTCTTTGGCTAGGTTTCTCTTT 58.690 41.667 0.00 0.00 0.00 2.52
2417 2995 5.309638 ACTCTTTGGCTAGGTTTCTCTTTC 58.690 41.667 0.00 0.00 0.00 2.62
2418 2996 4.652822 TCTTTGGCTAGGTTTCTCTTTCC 58.347 43.478 0.00 0.00 0.00 3.13
2419 2997 4.351111 TCTTTGGCTAGGTTTCTCTTTCCT 59.649 41.667 0.00 0.00 35.60 3.36
2420 2998 3.983044 TGGCTAGGTTTCTCTTTCCTC 57.017 47.619 0.00 0.00 33.34 3.71
2421 2999 2.572104 TGGCTAGGTTTCTCTTTCCTCC 59.428 50.000 0.00 0.00 33.34 4.30
2422 3000 2.092861 GGCTAGGTTTCTCTTTCCTCCC 60.093 54.545 0.00 0.00 33.34 4.30
2423 3001 2.418884 GCTAGGTTTCTCTTTCCTCCCG 60.419 54.545 0.00 0.00 33.34 5.14
2424 3002 0.325272 AGGTTTCTCTTTCCTCCCGC 59.675 55.000 0.00 0.00 0.00 6.13
2425 3003 0.325272 GGTTTCTCTTTCCTCCCGCT 59.675 55.000 0.00 0.00 0.00 5.52
2426 3004 1.443802 GTTTCTCTTTCCTCCCGCTG 58.556 55.000 0.00 0.00 0.00 5.18
2427 3005 0.324943 TTTCTCTTTCCTCCCGCTGG 59.675 55.000 0.00 0.00 0.00 4.85
2428 3006 0.836400 TTCTCTTTCCTCCCGCTGGT 60.836 55.000 0.00 0.00 0.00 4.00
2429 3007 1.078848 CTCTTTCCTCCCGCTGGTG 60.079 63.158 0.00 0.00 0.00 4.17
2430 3008 2.747855 CTTTCCTCCCGCTGGTGC 60.748 66.667 0.00 0.00 0.00 5.01
2431 3009 4.344865 TTTCCTCCCGCTGGTGCC 62.345 66.667 0.00 0.00 35.36 5.01
2452 3030 4.509737 GTGCCCTCGCCGGTCTAC 62.510 72.222 1.90 0.00 0.00 2.59
2455 3033 3.217743 CCCTCGCCGGTCTACCTC 61.218 72.222 1.90 0.00 0.00 3.85
2456 3034 3.584052 CCTCGCCGGTCTACCTCG 61.584 72.222 1.90 0.00 0.00 4.63
2457 3035 2.823147 CTCGCCGGTCTACCTCGT 60.823 66.667 1.90 0.00 33.49 4.18
2458 3036 2.821366 TCGCCGGTCTACCTCGTC 60.821 66.667 1.90 0.00 33.49 4.20
2459 3037 2.823147 CGCCGGTCTACCTCGTCT 60.823 66.667 1.90 0.00 0.00 4.18
2460 3038 2.404995 CGCCGGTCTACCTCGTCTT 61.405 63.158 1.90 0.00 0.00 3.01
2461 3039 1.888736 GCCGGTCTACCTCGTCTTT 59.111 57.895 1.90 0.00 0.00 2.52
2462 3040 0.458025 GCCGGTCTACCTCGTCTTTG 60.458 60.000 1.90 0.00 0.00 2.77
2463 3041 0.886563 CCGGTCTACCTCGTCTTTGT 59.113 55.000 0.00 0.00 0.00 2.83
2464 3042 1.135460 CCGGTCTACCTCGTCTTTGTC 60.135 57.143 0.00 0.00 0.00 3.18
2465 3043 1.811359 CGGTCTACCTCGTCTTTGTCT 59.189 52.381 0.00 0.00 0.00 3.41
2466 3044 2.228343 CGGTCTACCTCGTCTTTGTCTT 59.772 50.000 0.00 0.00 0.00 3.01
2467 3045 3.438087 CGGTCTACCTCGTCTTTGTCTTA 59.562 47.826 0.00 0.00 0.00 2.10
2468 3046 4.437121 CGGTCTACCTCGTCTTTGTCTTAG 60.437 50.000 0.00 0.00 0.00 2.18
2469 3047 4.142425 GGTCTACCTCGTCTTTGTCTTAGG 60.142 50.000 0.00 0.00 0.00 2.69
2470 3048 2.745515 ACCTCGTCTTTGTCTTAGGC 57.254 50.000 0.00 0.00 0.00 3.93
2471 3049 1.275573 ACCTCGTCTTTGTCTTAGGCC 59.724 52.381 0.00 0.00 0.00 5.19
2472 3050 1.275291 CCTCGTCTTTGTCTTAGGCCA 59.725 52.381 5.01 0.00 0.00 5.36
2473 3051 2.093447 CCTCGTCTTTGTCTTAGGCCAT 60.093 50.000 5.01 0.00 0.00 4.40
2474 3052 2.932614 CTCGTCTTTGTCTTAGGCCATG 59.067 50.000 5.01 0.00 0.00 3.66
2475 3053 2.009774 CGTCTTTGTCTTAGGCCATGG 58.990 52.381 7.63 7.63 0.00 3.66
2476 3054 2.354704 CGTCTTTGTCTTAGGCCATGGA 60.355 50.000 18.40 0.00 0.00 3.41
2477 3055 3.274288 GTCTTTGTCTTAGGCCATGGAG 58.726 50.000 18.40 3.48 0.00 3.86
2478 3056 2.239654 TCTTTGTCTTAGGCCATGGAGG 59.760 50.000 18.40 0.00 41.84 4.30
2488 3066 4.552365 CATGGAGGCGCGGTGGAT 62.552 66.667 8.83 0.00 0.00 3.41
2489 3067 3.797353 ATGGAGGCGCGGTGGATT 61.797 61.111 8.83 0.00 0.00 3.01
2490 3068 3.757248 ATGGAGGCGCGGTGGATTC 62.757 63.158 8.83 0.00 0.00 2.52
2498 3076 2.045340 CGGTGGATTCCGGCCTTT 60.045 61.111 0.00 0.00 45.88 3.11
2499 3077 1.222387 CGGTGGATTCCGGCCTTTA 59.778 57.895 0.00 0.00 45.88 1.85
2500 3078 1.093496 CGGTGGATTCCGGCCTTTAC 61.093 60.000 0.00 0.00 45.88 2.01
2501 3079 0.255033 GGTGGATTCCGGCCTTTACT 59.745 55.000 0.00 0.00 0.00 2.24
2502 3080 1.379527 GTGGATTCCGGCCTTTACTG 58.620 55.000 0.00 0.00 0.00 2.74
2503 3081 1.065709 GTGGATTCCGGCCTTTACTGA 60.066 52.381 0.00 0.00 0.00 3.41
2504 3082 1.065709 TGGATTCCGGCCTTTACTGAC 60.066 52.381 0.00 0.00 0.00 3.51
2505 3083 1.287425 GATTCCGGCCTTTACTGACG 58.713 55.000 0.00 0.00 0.00 4.35
2506 3084 0.107848 ATTCCGGCCTTTACTGACGG 60.108 55.000 0.00 0.00 45.52 4.79
2507 3085 2.125269 CCGGCCTTTACTGACGGG 60.125 66.667 0.00 0.00 40.79 5.28
2508 3086 2.652095 CCGGCCTTTACTGACGGGA 61.652 63.158 0.00 0.00 40.79 5.14
2509 3087 1.153628 CGGCCTTTACTGACGGGAG 60.154 63.158 0.00 0.00 0.00 4.30
2510 3088 1.221021 GGCCTTTACTGACGGGAGG 59.779 63.158 0.00 0.00 0.00 4.30
2511 3089 1.221021 GCCTTTACTGACGGGAGGG 59.779 63.158 0.00 0.00 0.00 4.30
2512 3090 1.551019 GCCTTTACTGACGGGAGGGT 61.551 60.000 0.00 0.00 0.00 4.34
2513 3091 0.981943 CCTTTACTGACGGGAGGGTT 59.018 55.000 0.00 0.00 0.00 4.11
2514 3092 1.350019 CCTTTACTGACGGGAGGGTTT 59.650 52.381 0.00 0.00 0.00 3.27
2515 3093 2.614734 CCTTTACTGACGGGAGGGTTTC 60.615 54.545 0.00 0.00 0.00 2.78
2516 3094 0.604578 TTACTGACGGGAGGGTTTCG 59.395 55.000 0.00 0.00 0.00 3.46
2517 3095 0.540365 TACTGACGGGAGGGTTTCGT 60.540 55.000 0.00 0.00 39.99 3.85
2518 3096 1.370064 CTGACGGGAGGGTTTCGTT 59.630 57.895 0.00 0.00 37.25 3.85
2519 3097 0.250166 CTGACGGGAGGGTTTCGTTT 60.250 55.000 0.00 0.00 37.25 3.60
2520 3098 0.180878 TGACGGGAGGGTTTCGTTTT 59.819 50.000 0.00 0.00 37.25 2.43
2521 3099 1.311859 GACGGGAGGGTTTCGTTTTT 58.688 50.000 0.00 0.00 37.25 1.94
2522 3100 1.265095 GACGGGAGGGTTTCGTTTTTC 59.735 52.381 0.00 0.00 37.25 2.29
2523 3101 0.594602 CGGGAGGGTTTCGTTTTTCC 59.405 55.000 0.00 0.00 0.00 3.13
2524 3102 1.694844 GGGAGGGTTTCGTTTTTCCA 58.305 50.000 0.00 0.00 0.00 3.53
2525 3103 2.244695 GGGAGGGTTTCGTTTTTCCAT 58.755 47.619 0.00 0.00 0.00 3.41
2526 3104 2.029380 GGGAGGGTTTCGTTTTTCCATG 60.029 50.000 0.00 0.00 0.00 3.66
2527 3105 2.888414 GGAGGGTTTCGTTTTTCCATGA 59.112 45.455 0.00 0.00 0.00 3.07
2528 3106 3.509967 GGAGGGTTTCGTTTTTCCATGAT 59.490 43.478 0.00 0.00 0.00 2.45
2529 3107 4.021456 GGAGGGTTTCGTTTTTCCATGATT 60.021 41.667 0.00 0.00 0.00 2.57
2530 3108 5.510690 GGAGGGTTTCGTTTTTCCATGATTT 60.511 40.000 0.00 0.00 0.00 2.17
2531 3109 5.924356 AGGGTTTCGTTTTTCCATGATTTT 58.076 33.333 0.00 0.00 0.00 1.82
2532 3110 6.353323 AGGGTTTCGTTTTTCCATGATTTTT 58.647 32.000 0.00 0.00 0.00 1.94
2533 3111 6.259829 AGGGTTTCGTTTTTCCATGATTTTTG 59.740 34.615 0.00 0.00 0.00 2.44
2534 3112 6.258947 GGGTTTCGTTTTTCCATGATTTTTGA 59.741 34.615 0.00 0.00 0.00 2.69
2535 3113 7.344441 GGTTTCGTTTTTCCATGATTTTTGAG 58.656 34.615 0.00 0.00 0.00 3.02
2536 3114 7.011016 GGTTTCGTTTTTCCATGATTTTTGAGT 59.989 33.333 0.00 0.00 0.00 3.41
2537 3115 8.387354 GTTTCGTTTTTCCATGATTTTTGAGTT 58.613 29.630 0.00 0.00 0.00 3.01
2538 3116 8.485976 TTCGTTTTTCCATGATTTTTGAGTTT 57.514 26.923 0.00 0.00 0.00 2.66
2539 3117 8.485976 TCGTTTTTCCATGATTTTTGAGTTTT 57.514 26.923 0.00 0.00 0.00 2.43
2540 3118 8.386606 TCGTTTTTCCATGATTTTTGAGTTTTG 58.613 29.630 0.00 0.00 0.00 2.44
2541 3119 8.174422 CGTTTTTCCATGATTTTTGAGTTTTGT 58.826 29.630 0.00 0.00 0.00 2.83
2542 3120 9.838975 GTTTTTCCATGATTTTTGAGTTTTGTT 57.161 25.926 0.00 0.00 0.00 2.83
2545 3123 8.885494 TTCCATGATTTTTGAGTTTTGTTAGG 57.115 30.769 0.00 0.00 0.00 2.69
2546 3124 8.243961 TCCATGATTTTTGAGTTTTGTTAGGA 57.756 30.769 0.00 0.00 0.00 2.94
2547 3125 8.869109 TCCATGATTTTTGAGTTTTGTTAGGAT 58.131 29.630 0.00 0.00 0.00 3.24
2548 3126 9.492973 CCATGATTTTTGAGTTTTGTTAGGATT 57.507 29.630 0.00 0.00 0.00 3.01
2551 3129 9.883142 TGATTTTTGAGTTTTGTTAGGATTTGT 57.117 25.926 0.00 0.00 0.00 2.83
2553 3131 9.665719 ATTTTTGAGTTTTGTTAGGATTTGTGT 57.334 25.926 0.00 0.00 0.00 3.72
2554 3132 8.696410 TTTTGAGTTTTGTTAGGATTTGTGTC 57.304 30.769 0.00 0.00 0.00 3.67
2555 3133 6.385649 TGAGTTTTGTTAGGATTTGTGTCC 57.614 37.500 0.00 0.00 38.62 4.02
2557 3135 7.284074 TGAGTTTTGTTAGGATTTGTGTCCTA 58.716 34.615 0.00 0.00 46.70 2.94
2565 3143 5.825593 AGGATTTGTGTCCTACTCAGAAA 57.174 39.130 0.00 0.00 46.70 2.52
2566 3144 5.799213 AGGATTTGTGTCCTACTCAGAAAG 58.201 41.667 0.00 0.00 46.70 2.62
2567 3145 4.938226 GGATTTGTGTCCTACTCAGAAAGG 59.062 45.833 0.00 0.00 33.06 3.11
2568 3146 5.513267 GGATTTGTGTCCTACTCAGAAAGGT 60.513 44.000 0.00 0.00 33.06 3.50
2569 3147 4.336889 TTGTGTCCTACTCAGAAAGGTG 57.663 45.455 0.00 0.00 34.30 4.00
2570 3148 3.572642 TGTGTCCTACTCAGAAAGGTGA 58.427 45.455 0.00 0.00 34.30 4.02
2571 3149 3.964688 TGTGTCCTACTCAGAAAGGTGAA 59.035 43.478 0.00 0.00 34.30 3.18
2572 3150 4.039245 TGTGTCCTACTCAGAAAGGTGAAG 59.961 45.833 0.00 0.00 34.30 3.02
2573 3151 3.006967 TGTCCTACTCAGAAAGGTGAAGC 59.993 47.826 0.00 0.00 34.30 3.86
2574 3152 2.231478 TCCTACTCAGAAAGGTGAAGCG 59.769 50.000 0.00 0.00 34.30 4.68
2575 3153 2.611518 CTACTCAGAAAGGTGAAGCGG 58.388 52.381 0.00 0.00 0.00 5.52
2576 3154 0.603975 ACTCAGAAAGGTGAAGCGGC 60.604 55.000 0.00 0.00 0.00 6.53
2577 3155 1.630244 CTCAGAAAGGTGAAGCGGCG 61.630 60.000 0.51 0.51 0.00 6.46
2578 3156 1.667830 CAGAAAGGTGAAGCGGCGA 60.668 57.895 12.98 0.00 0.00 5.54
2579 3157 1.668151 AGAAAGGTGAAGCGGCGAC 60.668 57.895 12.98 1.23 0.00 5.19
2591 3169 3.650369 GGCGACGGCTTTCTGAAA 58.350 55.556 15.00 2.44 39.81 2.69
2592 3170 2.171635 GGCGACGGCTTTCTGAAAT 58.828 52.632 15.00 0.00 39.81 2.17
2593 3171 0.179189 GGCGACGGCTTTCTGAAATG 60.179 55.000 15.00 0.05 39.81 2.32
2594 3172 0.179189 GCGACGGCTTTCTGAAATGG 60.179 55.000 2.88 0.00 35.83 3.16
2595 3173 1.438651 CGACGGCTTTCTGAAATGGA 58.561 50.000 2.88 0.00 0.00 3.41
2596 3174 1.804151 CGACGGCTTTCTGAAATGGAA 59.196 47.619 2.88 0.00 0.00 3.53
2597 3175 2.420022 CGACGGCTTTCTGAAATGGAAT 59.580 45.455 2.88 0.00 0.00 3.01
2598 3176 3.621268 CGACGGCTTTCTGAAATGGAATA 59.379 43.478 2.88 0.00 0.00 1.75
2599 3177 4.094294 CGACGGCTTTCTGAAATGGAATAA 59.906 41.667 2.88 0.00 0.00 1.40
2600 3178 5.567138 ACGGCTTTCTGAAATGGAATAAG 57.433 39.130 2.88 0.00 0.00 1.73
2601 3179 4.399303 ACGGCTTTCTGAAATGGAATAAGG 59.601 41.667 2.88 0.00 0.00 2.69
2602 3180 4.399303 CGGCTTTCTGAAATGGAATAAGGT 59.601 41.667 2.88 0.00 0.00 3.50
2603 3181 5.105756 CGGCTTTCTGAAATGGAATAAGGTT 60.106 40.000 2.88 0.00 0.00 3.50
2604 3182 6.333416 GGCTTTCTGAAATGGAATAAGGTTC 58.667 40.000 2.88 0.00 0.00 3.62
2605 3183 6.153510 GGCTTTCTGAAATGGAATAAGGTTCT 59.846 38.462 2.88 0.00 0.00 3.01
2606 3184 7.339466 GGCTTTCTGAAATGGAATAAGGTTCTA 59.661 37.037 2.88 0.00 0.00 2.10
2607 3185 8.907885 GCTTTCTGAAATGGAATAAGGTTCTAT 58.092 33.333 2.88 0.00 0.00 1.98
2613 3191 9.959721 TGAAATGGAATAAGGTTCTATATAGCC 57.040 33.333 4.75 1.82 0.00 3.93
2614 3192 9.397280 GAAATGGAATAAGGTTCTATATAGCCC 57.603 37.037 4.75 7.41 0.00 5.19
2615 3193 8.463055 AATGGAATAAGGTTCTATATAGCCCA 57.537 34.615 16.25 0.00 0.00 5.36
2616 3194 7.881912 TGGAATAAGGTTCTATATAGCCCAA 57.118 36.000 16.25 7.82 0.00 4.12
2617 3195 8.463055 TGGAATAAGGTTCTATATAGCCCAAT 57.537 34.615 16.25 9.21 0.00 3.16
2618 3196 8.900802 TGGAATAAGGTTCTATATAGCCCAATT 58.099 33.333 16.25 14.51 0.00 2.32
2619 3197 9.397280 GGAATAAGGTTCTATATAGCCCAATTC 57.603 37.037 20.95 20.95 0.00 2.17
2620 3198 9.397280 GAATAAGGTTCTATATAGCCCAATTCC 57.603 37.037 19.88 10.78 0.00 3.01
2621 3199 5.422214 AGGTTCTATATAGCCCAATTCCG 57.578 43.478 16.25 0.00 0.00 4.30
2622 3200 4.225267 AGGTTCTATATAGCCCAATTCCGG 59.775 45.833 16.25 0.00 0.00 5.14
2623 3201 4.019591 GGTTCTATATAGCCCAATTCCGGT 60.020 45.833 0.00 0.00 0.00 5.28
2624 3202 4.819105 TCTATATAGCCCAATTCCGGTG 57.181 45.455 0.00 0.00 0.00 4.94
2625 3203 2.879103 ATATAGCCCAATTCCGGTGG 57.121 50.000 0.00 1.00 35.77 4.61
2626 3204 1.513858 TATAGCCCAATTCCGGTGGT 58.486 50.000 8.65 0.00 34.01 4.16
2627 3205 0.106719 ATAGCCCAATTCCGGTGGTG 60.107 55.000 8.65 1.92 34.01 4.17
2628 3206 1.493854 TAGCCCAATTCCGGTGGTGT 61.494 55.000 8.65 0.00 34.01 4.16
2629 3207 1.906333 GCCCAATTCCGGTGGTGTT 60.906 57.895 8.65 0.00 34.01 3.32
2630 3208 1.468506 GCCCAATTCCGGTGGTGTTT 61.469 55.000 8.65 0.00 34.01 2.83
2631 3209 0.601057 CCCAATTCCGGTGGTGTTTC 59.399 55.000 8.65 0.00 34.01 2.78
2632 3210 1.616159 CCAATTCCGGTGGTGTTTCT 58.384 50.000 0.00 0.00 0.00 2.52
2633 3211 2.553466 CCCAATTCCGGTGGTGTTTCTA 60.553 50.000 8.65 0.00 34.01 2.10
2634 3212 2.747446 CCAATTCCGGTGGTGTTTCTAG 59.253 50.000 0.00 0.00 0.00 2.43
2635 3213 2.109425 ATTCCGGTGGTGTTTCTAGC 57.891 50.000 0.00 0.00 0.00 3.42
2636 3214 0.759959 TTCCGGTGGTGTTTCTAGCA 59.240 50.000 0.00 0.00 0.00 3.49
2637 3215 0.034337 TCCGGTGGTGTTTCTAGCAC 59.966 55.000 0.00 0.00 45.65 4.40
2642 3220 2.442084 GGTGTTTCTAGCACCGTCG 58.558 57.895 2.70 0.00 45.57 5.12
2643 3221 1.012486 GGTGTTTCTAGCACCGTCGG 61.012 60.000 10.48 10.48 45.57 4.79
2644 3222 0.038892 GTGTTTCTAGCACCGTCGGA 60.039 55.000 20.51 0.00 0.00 4.55
2645 3223 0.242825 TGTTTCTAGCACCGTCGGAG 59.757 55.000 20.51 12.00 0.00 4.63
2646 3224 0.458025 GTTTCTAGCACCGTCGGAGG 60.458 60.000 20.51 10.82 37.30 4.30
2647 3225 1.601419 TTTCTAGCACCGTCGGAGGG 61.601 60.000 20.51 14.87 35.02 4.30
2648 3226 4.208686 CTAGCACCGTCGGAGGGC 62.209 72.222 20.51 17.70 35.02 5.19
2655 3233 4.351938 CGTCGGAGGGCGTGTGAA 62.352 66.667 0.00 0.00 0.00 3.18
2656 3234 2.432628 GTCGGAGGGCGTGTGAAG 60.433 66.667 0.00 0.00 0.00 3.02
2657 3235 2.915659 TCGGAGGGCGTGTGAAGT 60.916 61.111 0.00 0.00 0.00 3.01
2658 3236 2.738521 CGGAGGGCGTGTGAAGTG 60.739 66.667 0.00 0.00 0.00 3.16
2659 3237 2.426023 GGAGGGCGTGTGAAGTGT 59.574 61.111 0.00 0.00 0.00 3.55
2660 3238 1.668151 GGAGGGCGTGTGAAGTGTC 60.668 63.158 0.00 0.00 0.00 3.67
2661 3239 1.367840 GAGGGCGTGTGAAGTGTCT 59.632 57.895 0.00 0.00 0.00 3.41
2662 3240 0.667792 GAGGGCGTGTGAAGTGTCTC 60.668 60.000 0.00 0.00 0.00 3.36
2663 3241 1.668151 GGGCGTGTGAAGTGTCTCC 60.668 63.158 0.00 0.00 0.00 3.71
2664 3242 1.069090 GGCGTGTGAAGTGTCTCCA 59.931 57.895 0.00 0.00 0.00 3.86
2665 3243 0.531974 GGCGTGTGAAGTGTCTCCAA 60.532 55.000 0.00 0.00 0.00 3.53
2666 3244 0.582005 GCGTGTGAAGTGTCTCCAAC 59.418 55.000 0.00 0.00 0.00 3.77
2667 3245 0.852777 CGTGTGAAGTGTCTCCAACG 59.147 55.000 0.00 0.00 0.00 4.10
2668 3246 1.217882 GTGTGAAGTGTCTCCAACGG 58.782 55.000 0.00 0.00 0.00 4.44
2669 3247 1.116308 TGTGAAGTGTCTCCAACGGA 58.884 50.000 0.00 0.00 0.00 4.69
2670 3248 1.691976 TGTGAAGTGTCTCCAACGGAT 59.308 47.619 0.00 0.00 0.00 4.18
2671 3249 2.288825 TGTGAAGTGTCTCCAACGGATC 60.289 50.000 0.00 0.00 0.00 3.36
2672 3250 2.028930 GTGAAGTGTCTCCAACGGATCT 60.029 50.000 0.00 0.00 0.00 2.75
2673 3251 2.231478 TGAAGTGTCTCCAACGGATCTC 59.769 50.000 0.00 0.00 0.00 2.75
2674 3252 0.811915 AGTGTCTCCAACGGATCTCG 59.188 55.000 0.00 0.00 45.88 4.04
2683 3261 4.635925 CGGATCTCGTGGGATTCG 57.364 61.111 0.00 0.00 38.18 3.34
2684 3262 1.007271 CGGATCTCGTGGGATTCGG 60.007 63.158 2.33 0.00 40.05 4.30
2685 3263 1.735376 CGGATCTCGTGGGATTCGGT 61.735 60.000 2.33 0.00 40.05 4.69
2686 3264 0.032267 GGATCTCGTGGGATTCGGTC 59.968 60.000 0.00 0.00 0.00 4.79
2687 3265 0.744874 GATCTCGTGGGATTCGGTCA 59.255 55.000 0.00 0.00 0.00 4.02
2688 3266 0.747255 ATCTCGTGGGATTCGGTCAG 59.253 55.000 0.00 0.00 0.00 3.51
2689 3267 1.519455 CTCGTGGGATTCGGTCAGC 60.519 63.158 0.00 0.00 0.00 4.26
2690 3268 2.225791 CTCGTGGGATTCGGTCAGCA 62.226 60.000 0.00 0.00 0.00 4.41
2691 3269 1.153369 CGTGGGATTCGGTCAGCAT 60.153 57.895 0.00 0.00 0.00 3.79
2692 3270 0.744414 CGTGGGATTCGGTCAGCATT 60.744 55.000 0.00 0.00 0.00 3.56
2693 3271 1.463674 GTGGGATTCGGTCAGCATTT 58.536 50.000 0.00 0.00 0.00 2.32
2694 3272 1.133025 GTGGGATTCGGTCAGCATTTG 59.867 52.381 0.00 0.00 0.00 2.32
2695 3273 1.271871 TGGGATTCGGTCAGCATTTGT 60.272 47.619 0.00 0.00 0.00 2.83
2696 3274 1.401905 GGGATTCGGTCAGCATTTGTC 59.598 52.381 0.00 0.00 0.00 3.18
2697 3275 2.359900 GGATTCGGTCAGCATTTGTCT 58.640 47.619 0.00 0.00 0.00 3.41
2698 3276 2.749621 GGATTCGGTCAGCATTTGTCTT 59.250 45.455 0.00 0.00 0.00 3.01
2699 3277 3.181506 GGATTCGGTCAGCATTTGTCTTC 60.182 47.826 0.00 0.00 0.00 2.87
2700 3278 2.542020 TCGGTCAGCATTTGTCTTCA 57.458 45.000 0.00 0.00 0.00 3.02
2701 3279 2.416747 TCGGTCAGCATTTGTCTTCAG 58.583 47.619 0.00 0.00 0.00 3.02
2702 3280 2.146342 CGGTCAGCATTTGTCTTCAGT 58.854 47.619 0.00 0.00 0.00 3.41
2703 3281 2.096069 CGGTCAGCATTTGTCTTCAGTG 60.096 50.000 0.00 0.00 0.00 3.66
2704 3282 2.227388 GGTCAGCATTTGTCTTCAGTGG 59.773 50.000 0.00 0.00 0.00 4.00
2705 3283 3.141398 GTCAGCATTTGTCTTCAGTGGA 58.859 45.455 0.00 0.00 0.00 4.02
2706 3284 3.755378 GTCAGCATTTGTCTTCAGTGGAT 59.245 43.478 0.00 0.00 0.00 3.41
2707 3285 4.005650 TCAGCATTTGTCTTCAGTGGATC 58.994 43.478 0.00 0.00 0.00 3.36
2708 3286 3.128242 CAGCATTTGTCTTCAGTGGATCC 59.872 47.826 4.20 4.20 0.00 3.36
2709 3287 3.084039 GCATTTGTCTTCAGTGGATCCA 58.916 45.455 11.44 11.44 0.00 3.41
2710 3288 3.119708 GCATTTGTCTTCAGTGGATCCAC 60.120 47.826 33.72 33.72 46.50 4.02
2723 3301 4.678423 TCCACGTGGATCCGATCT 57.322 55.556 33.23 0.00 39.78 2.75
2724 3302 2.896278 TCCACGTGGATCCGATCTT 58.104 52.632 33.23 0.00 39.78 2.40
2725 3303 1.191535 TCCACGTGGATCCGATCTTT 58.808 50.000 33.23 0.00 39.78 2.52
2726 3304 1.134818 TCCACGTGGATCCGATCTTTG 60.135 52.381 33.23 3.06 39.78 2.77
2727 3305 1.405526 CCACGTGGATCCGATCTTTGT 60.406 52.381 31.31 1.99 37.39 2.83
2728 3306 2.346803 CACGTGGATCCGATCTTTGTT 58.653 47.619 7.95 0.00 0.00 2.83
2729 3307 2.348666 CACGTGGATCCGATCTTTGTTC 59.651 50.000 7.95 0.00 0.00 3.18
2730 3308 1.588404 CGTGGATCCGATCTTTGTTCG 59.412 52.381 7.39 2.01 36.38 3.95
2731 3309 2.618053 GTGGATCCGATCTTTGTTCGT 58.382 47.619 7.39 0.00 34.85 3.85
2732 3310 2.603560 GTGGATCCGATCTTTGTTCGTC 59.396 50.000 7.39 0.00 34.85 4.20
2733 3311 2.496070 TGGATCCGATCTTTGTTCGTCT 59.504 45.455 7.39 0.00 34.85 4.18
2734 3312 2.860735 GGATCCGATCTTTGTTCGTCTG 59.139 50.000 8.29 0.00 34.85 3.51
2735 3313 3.512680 GATCCGATCTTTGTTCGTCTGT 58.487 45.455 0.75 0.00 34.85 3.41
2736 3314 2.672714 TCCGATCTTTGTTCGTCTGTG 58.327 47.619 0.00 0.00 34.85 3.66
2737 3315 2.035449 TCCGATCTTTGTTCGTCTGTGT 59.965 45.455 0.00 0.00 34.85 3.72
2738 3316 2.800544 CCGATCTTTGTTCGTCTGTGTT 59.199 45.455 0.00 0.00 34.85 3.32
2739 3317 3.247648 CCGATCTTTGTTCGTCTGTGTTT 59.752 43.478 0.00 0.00 34.85 2.83
2740 3318 4.203828 CGATCTTTGTTCGTCTGTGTTTG 58.796 43.478 0.00 0.00 32.08 2.93
2741 3319 4.260212 CGATCTTTGTTCGTCTGTGTTTGT 60.260 41.667 0.00 0.00 32.08 2.83
2742 3320 4.335082 TCTTTGTTCGTCTGTGTTTGTG 57.665 40.909 0.00 0.00 0.00 3.33
2743 3321 3.749088 TCTTTGTTCGTCTGTGTTTGTGT 59.251 39.130 0.00 0.00 0.00 3.72
2744 3322 3.463533 TTGTTCGTCTGTGTTTGTGTG 57.536 42.857 0.00 0.00 0.00 3.82
2745 3323 1.129624 TGTTCGTCTGTGTTTGTGTGC 59.870 47.619 0.00 0.00 0.00 4.57
2746 3324 0.730265 TTCGTCTGTGTTTGTGTGCC 59.270 50.000 0.00 0.00 0.00 5.01
2747 3325 0.107897 TCGTCTGTGTTTGTGTGCCT 60.108 50.000 0.00 0.00 0.00 4.75
2748 3326 1.137282 TCGTCTGTGTTTGTGTGCCTA 59.863 47.619 0.00 0.00 0.00 3.93
2749 3327 2.143122 CGTCTGTGTTTGTGTGCCTAT 58.857 47.619 0.00 0.00 0.00 2.57
2750 3328 3.006003 TCGTCTGTGTTTGTGTGCCTATA 59.994 43.478 0.00 0.00 0.00 1.31
2751 3329 3.743911 CGTCTGTGTTTGTGTGCCTATAA 59.256 43.478 0.00 0.00 0.00 0.98
2752 3330 4.143115 CGTCTGTGTTTGTGTGCCTATAAG 60.143 45.833 0.00 0.00 0.00 1.73
2753 3331 4.755123 GTCTGTGTTTGTGTGCCTATAAGT 59.245 41.667 0.00 0.00 0.00 2.24
2754 3332 5.238650 GTCTGTGTTTGTGTGCCTATAAGTT 59.761 40.000 0.00 0.00 0.00 2.66
2755 3333 5.238432 TCTGTGTTTGTGTGCCTATAAGTTG 59.762 40.000 0.00 0.00 0.00 3.16
2756 3334 4.277174 TGTGTTTGTGTGCCTATAAGTTGG 59.723 41.667 0.00 0.00 0.00 3.77
2757 3335 4.517453 GTGTTTGTGTGCCTATAAGTTGGA 59.483 41.667 0.00 0.00 0.00 3.53
2758 3336 5.183140 GTGTTTGTGTGCCTATAAGTTGGAT 59.817 40.000 0.00 0.00 0.00 3.41
2759 3337 5.414454 TGTTTGTGTGCCTATAAGTTGGATC 59.586 40.000 0.00 0.00 0.00 3.36
2760 3338 4.150897 TGTGTGCCTATAAGTTGGATCC 57.849 45.455 4.20 4.20 0.00 3.36
2761 3339 3.780294 TGTGTGCCTATAAGTTGGATCCT 59.220 43.478 14.23 0.00 0.00 3.24
2762 3340 4.227300 TGTGTGCCTATAAGTTGGATCCTT 59.773 41.667 14.23 1.23 0.00 3.36
2763 3341 4.816925 GTGTGCCTATAAGTTGGATCCTTC 59.183 45.833 14.23 5.98 0.00 3.46
2764 3342 4.141482 TGTGCCTATAAGTTGGATCCTTCC 60.141 45.833 14.23 0.32 42.94 3.46
2765 3343 3.071023 TGCCTATAAGTTGGATCCTTCCG 59.929 47.826 14.23 0.00 45.89 4.30
2766 3344 3.323979 GCCTATAAGTTGGATCCTTCCGA 59.676 47.826 14.23 0.00 45.89 4.55
2767 3345 4.020128 GCCTATAAGTTGGATCCTTCCGAT 60.020 45.833 14.23 3.95 45.89 4.18
2768 3346 5.725362 CCTATAAGTTGGATCCTTCCGATC 58.275 45.833 14.23 0.00 45.89 3.69
2769 3347 5.482175 CCTATAAGTTGGATCCTTCCGATCT 59.518 44.000 14.23 0.00 45.90 2.75
2770 3348 6.663953 CCTATAAGTTGGATCCTTCCGATCTA 59.336 42.308 14.23 0.00 45.90 1.98
2771 3349 4.674281 AAGTTGGATCCTTCCGATCTAC 57.326 45.455 14.23 0.00 45.90 2.59
2772 3350 3.643237 AGTTGGATCCTTCCGATCTACA 58.357 45.455 14.23 0.00 45.90 2.74
2773 3351 3.385111 AGTTGGATCCTTCCGATCTACAC 59.615 47.826 14.23 0.00 45.90 2.90
2774 3352 3.314307 TGGATCCTTCCGATCTACACT 57.686 47.619 14.23 0.00 45.90 3.55
2775 3353 3.643237 TGGATCCTTCCGATCTACACTT 58.357 45.455 14.23 0.00 45.90 3.16
2776 3354 3.637229 TGGATCCTTCCGATCTACACTTC 59.363 47.826 14.23 0.00 45.90 3.01
2777 3355 3.892588 GGATCCTTCCGATCTACACTTCT 59.107 47.826 3.84 0.00 45.90 2.85
2778 3356 4.022676 GGATCCTTCCGATCTACACTTCTC 60.023 50.000 3.84 0.00 45.90 2.87
2779 3357 4.237976 TCCTTCCGATCTACACTTCTCT 57.762 45.455 0.00 0.00 0.00 3.10
2780 3358 4.601084 TCCTTCCGATCTACACTTCTCTT 58.399 43.478 0.00 0.00 0.00 2.85
2781 3359 4.641094 TCCTTCCGATCTACACTTCTCTTC 59.359 45.833 0.00 0.00 0.00 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 72 6.204359 GGAAAGCGACGAGTAGTTGATATTA 58.796 40.000 0.00 0.00 36.30 0.98
94 102 2.376109 GAGGAGGACATTACCGAGTCA 58.624 52.381 0.00 0.00 36.50 3.41
121 129 1.804151 GTTGCTGACGCCTACATTCAA 59.196 47.619 0.00 0.00 34.43 2.69
199 676 1.150536 CCCTCTCTCTAGCCTCGCT 59.849 63.158 0.00 0.00 43.41 4.93
210 687 1.152567 CTCATCTCGCCCCCTCTCT 60.153 63.158 0.00 0.00 0.00 3.10
241 718 3.034635 ACTCTCTCCACACTCAGTTTGT 58.965 45.455 0.00 0.00 0.00 2.83
244 721 2.625790 GACACTCTCTCCACACTCAGTT 59.374 50.000 0.00 0.00 0.00 3.16
258 735 5.154932 GCGCTCGTTATAATATGACACTCT 58.845 41.667 0.00 0.00 0.00 3.24
262 739 3.239254 CGGCGCTCGTTATAATATGACA 58.761 45.455 7.64 0.00 0.00 3.58
264 741 2.871133 CCGGCGCTCGTTATAATATGA 58.129 47.619 7.64 0.00 37.11 2.15
326 803 3.437795 CTGGCTTTGGCGCTCCAG 61.438 66.667 7.64 12.43 44.53 3.86
346 823 1.226262 GGGGAAATTCGGCCTAGCA 59.774 57.895 0.00 0.00 0.00 3.49
476 955 3.730761 CGACCGTCGTCCGTCCTT 61.731 66.667 12.91 0.00 35.40 3.36
480 959 3.771568 TTTTGCGACCGTCGTCCGT 62.772 57.895 21.37 0.00 42.81 4.69
491 970 2.161808 TGTTTTTGTCCGTCTTTTGCGA 59.838 40.909 0.00 0.00 0.00 5.10
492 971 2.277834 GTGTTTTTGTCCGTCTTTTGCG 59.722 45.455 0.00 0.00 0.00 4.85
493 972 2.601314 GGTGTTTTTGTCCGTCTTTTGC 59.399 45.455 0.00 0.00 0.00 3.68
494 973 2.849473 CGGTGTTTTTGTCCGTCTTTTG 59.151 45.455 0.00 0.00 39.51 2.44
495 974 3.139603 CGGTGTTTTTGTCCGTCTTTT 57.860 42.857 0.00 0.00 39.51 2.27
496 975 2.836479 CGGTGTTTTTGTCCGTCTTT 57.164 45.000 0.00 0.00 39.51 2.52
502 981 0.734309 AACGGACGGTGTTTTTGTCC 59.266 50.000 0.55 0.55 46.91 4.02
503 982 2.178783 CAAACGGACGGTGTTTTTGTC 58.821 47.619 0.00 0.00 37.44 3.18
504 983 1.135344 CCAAACGGACGGTGTTTTTGT 60.135 47.619 0.00 0.00 37.44 2.83
505 984 1.132643 TCCAAACGGACGGTGTTTTTG 59.867 47.619 0.00 0.00 37.44 2.44
506 985 1.461559 TCCAAACGGACGGTGTTTTT 58.538 45.000 0.00 0.00 37.44 1.94
507 986 1.682740 ATCCAAACGGACGGTGTTTT 58.317 45.000 0.00 0.00 37.44 2.43
508 987 2.419667 CTATCCAAACGGACGGTGTTT 58.580 47.619 0.00 0.00 40.01 2.83
509 988 1.942586 GCTATCCAAACGGACGGTGTT 60.943 52.381 0.00 0.00 34.62 3.32
510 989 0.390735 GCTATCCAAACGGACGGTGT 60.391 55.000 0.00 0.00 34.62 4.16
511 990 1.087771 GGCTATCCAAACGGACGGTG 61.088 60.000 0.00 0.00 34.62 4.94
512 991 1.219935 GGCTATCCAAACGGACGGT 59.780 57.895 0.00 0.00 34.62 4.83
513 992 1.523032 GGGCTATCCAAACGGACGG 60.523 63.158 0.00 0.00 34.62 4.79
514 993 1.523032 GGGGCTATCCAAACGGACG 60.523 63.158 0.00 0.00 34.62 4.79
515 994 1.523032 CGGGGCTATCCAAACGGAC 60.523 63.158 0.00 0.00 34.62 4.79
516 995 1.555477 AACGGGGCTATCCAAACGGA 61.555 55.000 0.00 0.00 37.22 4.69
517 996 1.078001 AACGGGGCTATCCAAACGG 60.078 57.895 0.00 0.00 37.22 4.44
518 997 1.373590 CCAACGGGGCTATCCAAACG 61.374 60.000 0.00 0.00 37.22 3.60
525 1004 1.077716 GCAACTCCAACGGGGCTAT 60.078 57.895 0.00 0.00 36.21 2.97
526 1005 2.180159 GAGCAACTCCAACGGGGCTA 62.180 60.000 0.00 0.00 36.21 3.93
527 1006 3.553095 GAGCAACTCCAACGGGGCT 62.553 63.158 0.00 0.00 36.21 5.19
532 1011 2.673368 GGTGATTAGAGCAACTCCAACG 59.327 50.000 0.00 0.00 0.00 4.10
534 1013 2.642311 TGGGTGATTAGAGCAACTCCAA 59.358 45.455 0.00 0.00 0.00 3.53
537 1016 7.573968 AATAATTGGGTGATTAGAGCAACTC 57.426 36.000 0.00 0.00 0.00 3.01
540 1019 7.479980 CGAAAATAATTGGGTGATTAGAGCAA 58.520 34.615 0.00 0.00 0.00 3.91
548 1027 3.283751 TCGGCGAAAATAATTGGGTGAT 58.716 40.909 7.35 0.00 0.00 3.06
705 1206 0.324943 GGGACTTGTTGGCTAGCTCA 59.675 55.000 15.72 8.26 0.00 4.26
730 1233 1.831106 TGGTTGTATCCTGCTCGTGAT 59.169 47.619 0.00 0.00 0.00 3.06
765 1268 1.619669 GAGGGGGTGAAGATGGGGT 60.620 63.158 0.00 0.00 0.00 4.95
774 1277 1.719378 AGAGAGAGAAAGAGGGGGTGA 59.281 52.381 0.00 0.00 0.00 4.02
777 1280 4.965532 TGATTTAGAGAGAGAAAGAGGGGG 59.034 45.833 0.00 0.00 0.00 5.40
778 1281 5.660864 ACTGATTTAGAGAGAGAAAGAGGGG 59.339 44.000 0.00 0.00 0.00 4.79
782 1286 6.629128 CAGCACTGATTTAGAGAGAGAAAGA 58.371 40.000 0.00 0.00 0.00 2.52
908 1423 2.966182 GAACTTATACCGCGCGCCCT 62.966 60.000 27.36 13.33 0.00 5.19
1172 1693 6.129053 ACGTGCTATAAAGTGTACTAGGTC 57.871 41.667 0.00 0.00 0.00 3.85
1177 1698 9.028185 GCTTAATAACGTGCTATAAAGTGTACT 57.972 33.333 0.00 0.00 0.00 2.73
1178 1699 9.028185 AGCTTAATAACGTGCTATAAAGTGTAC 57.972 33.333 0.00 0.00 33.64 2.90
1372 1902 1.070758 ACAAACATCTCGGTGTGAGCT 59.929 47.619 0.00 0.00 44.86 4.09
1379 1909 3.131223 AGATCATCGACAAACATCTCGGT 59.869 43.478 0.00 0.00 0.00 4.69
1385 1915 4.564372 CGTCAAGAGATCATCGACAAACAT 59.436 41.667 0.00 0.00 0.00 2.71
1556 2087 6.873605 CGGCTACATAAATAGTTGATGGATCA 59.126 38.462 0.00 0.00 34.44 2.92
1682 2213 0.250295 TGCACTTGTTCCCCTCGAAG 60.250 55.000 0.00 0.00 0.00 3.79
1839 2370 1.531149 CACCTACCGAGCAAGTTGTTG 59.469 52.381 4.48 0.00 36.67 3.33
2039 2603 7.383687 AGACGAACCAACTCATCAAGTAAATA 58.616 34.615 0.00 0.00 37.17 1.40
2075 2651 1.227645 TACGAGCTGGGCATGATGC 60.228 57.895 9.33 9.33 44.08 3.91
2076 2652 1.217585 CGTACGAGCTGGGCATGATG 61.218 60.000 10.44 0.00 0.00 3.07
2092 2668 2.993449 TGACATGAACACGTAGCGTA 57.007 45.000 0.00 0.00 38.32 4.42
2093 2669 1.992667 CATGACATGAACACGTAGCGT 59.007 47.619 10.03 0.00 42.36 5.07
2094 2670 1.267038 GCATGACATGAACACGTAGCG 60.267 52.381 19.76 0.00 0.00 4.26
2095 2671 1.731709 TGCATGACATGAACACGTAGC 59.268 47.619 19.76 0.69 0.00 3.58
2096 2672 5.717038 TTATGCATGACATGAACACGTAG 57.283 39.130 19.76 0.00 40.06 3.51
2188 2766 6.368779 TCTATAGATTACCCCCAAAATCCG 57.631 41.667 0.00 0.00 33.44 4.18
2219 2797 7.453034 ACATAATTCAGACGACACAAATTACG 58.547 34.615 0.00 0.00 0.00 3.18
2250 2828 7.481275 CAATTAATGGACAAGTTGCTTTTGT 57.519 32.000 1.81 1.59 41.21 2.83
2286 2864 1.004610 CGTCGCCATCACATCAACATC 60.005 52.381 0.00 0.00 0.00 3.06
2287 2865 1.009078 CGTCGCCATCACATCAACAT 58.991 50.000 0.00 0.00 0.00 2.71
2313 2891 3.391382 GGGGCAGCCGTACACTCT 61.391 66.667 5.00 0.00 0.00 3.24
2327 2905 0.321671 ATATGCAGATCGAACCGGGG 59.678 55.000 6.32 0.00 0.00 5.73
2328 2906 2.993899 GTTATATGCAGATCGAACCGGG 59.006 50.000 6.32 0.00 0.00 5.73
2357 2935 5.701029 AAGAAAACGATTGTGTGCAAAAG 57.299 34.783 0.00 0.00 38.21 2.27
2363 2941 8.335356 TCTCTAAAGAAAGAAAACGATTGTGTG 58.665 33.333 0.00 0.00 0.00 3.82
2365 2943 9.716507 TTTCTCTAAAGAAAGAAAACGATTGTG 57.283 29.630 0.00 0.00 44.63 3.33
2378 2956 6.486993 GCCAAAGAGTCCTTTCTCTAAAGAAA 59.513 38.462 0.00 1.10 46.72 2.52
2379 2957 5.998363 GCCAAAGAGTCCTTTCTCTAAAGAA 59.002 40.000 0.00 0.00 44.14 2.52
2380 2958 5.308237 AGCCAAAGAGTCCTTTCTCTAAAGA 59.692 40.000 0.00 0.00 44.14 2.52
2381 2959 5.555966 AGCCAAAGAGTCCTTTCTCTAAAG 58.444 41.667 0.00 0.00 43.03 1.85
2382 2960 5.568620 AGCCAAAGAGTCCTTTCTCTAAA 57.431 39.130 0.00 0.00 43.03 1.85
2383 2961 5.187967 CCTAGCCAAAGAGTCCTTTCTCTAA 59.812 44.000 0.00 0.00 43.03 2.10
2384 2962 4.712337 CCTAGCCAAAGAGTCCTTTCTCTA 59.288 45.833 0.00 0.00 43.03 2.43
2385 2963 3.517500 CCTAGCCAAAGAGTCCTTTCTCT 59.482 47.826 0.00 0.00 45.36 3.10
2386 2964 3.262151 ACCTAGCCAAAGAGTCCTTTCTC 59.738 47.826 0.00 0.00 40.42 2.87
2387 2965 3.252351 ACCTAGCCAAAGAGTCCTTTCT 58.748 45.455 0.00 0.00 40.42 2.52
2388 2966 3.704800 ACCTAGCCAAAGAGTCCTTTC 57.295 47.619 0.00 0.00 40.42 2.62
2389 2967 4.104897 AGAAACCTAGCCAAAGAGTCCTTT 59.895 41.667 0.00 0.00 42.98 3.11
2390 2968 3.653352 AGAAACCTAGCCAAAGAGTCCTT 59.347 43.478 0.00 0.00 0.00 3.36
2391 2969 3.252351 AGAAACCTAGCCAAAGAGTCCT 58.748 45.455 0.00 0.00 0.00 3.85
2392 2970 3.262151 AGAGAAACCTAGCCAAAGAGTCC 59.738 47.826 0.00 0.00 0.00 3.85
2393 2971 4.545208 AGAGAAACCTAGCCAAAGAGTC 57.455 45.455 0.00 0.00 0.00 3.36
2394 2972 4.984146 AAGAGAAACCTAGCCAAAGAGT 57.016 40.909 0.00 0.00 0.00 3.24
2395 2973 4.697828 GGAAAGAGAAACCTAGCCAAAGAG 59.302 45.833 0.00 0.00 0.00 2.85
2396 2974 4.351111 AGGAAAGAGAAACCTAGCCAAAGA 59.649 41.667 0.00 0.00 31.78 2.52
2397 2975 4.657013 AGGAAAGAGAAACCTAGCCAAAG 58.343 43.478 0.00 0.00 31.78 2.77
2398 2976 4.506802 GGAGGAAAGAGAAACCTAGCCAAA 60.507 45.833 0.00 0.00 33.89 3.28
2399 2977 3.009143 GGAGGAAAGAGAAACCTAGCCAA 59.991 47.826 0.00 0.00 33.89 4.52
2400 2978 2.572104 GGAGGAAAGAGAAACCTAGCCA 59.428 50.000 0.00 0.00 33.89 4.75
2401 2979 2.092861 GGGAGGAAAGAGAAACCTAGCC 60.093 54.545 0.00 0.00 33.89 3.93
2402 2980 2.418884 CGGGAGGAAAGAGAAACCTAGC 60.419 54.545 0.00 0.00 33.89 3.42
2403 2981 2.418884 GCGGGAGGAAAGAGAAACCTAG 60.419 54.545 0.00 0.00 33.89 3.02
2404 2982 1.553704 GCGGGAGGAAAGAGAAACCTA 59.446 52.381 0.00 0.00 33.89 3.08
2405 2983 0.325272 GCGGGAGGAAAGAGAAACCT 59.675 55.000 0.00 0.00 36.68 3.50
2406 2984 0.325272 AGCGGGAGGAAAGAGAAACC 59.675 55.000 0.00 0.00 0.00 3.27
2407 2985 1.443802 CAGCGGGAGGAAAGAGAAAC 58.556 55.000 0.00 0.00 0.00 2.78
2408 2986 0.324943 CCAGCGGGAGGAAAGAGAAA 59.675 55.000 0.00 0.00 35.59 2.52
2409 2987 0.836400 ACCAGCGGGAGGAAAGAGAA 60.836 55.000 10.86 0.00 38.05 2.87
2410 2988 1.229209 ACCAGCGGGAGGAAAGAGA 60.229 57.895 10.86 0.00 38.05 3.10
2411 2989 1.078848 CACCAGCGGGAGGAAAGAG 60.079 63.158 10.86 0.00 38.05 2.85
2412 2990 3.068881 CACCAGCGGGAGGAAAGA 58.931 61.111 10.86 0.00 38.05 2.52
2413 2991 2.747855 GCACCAGCGGGAGGAAAG 60.748 66.667 10.86 0.00 38.05 2.62
2414 2992 4.344865 GGCACCAGCGGGAGGAAA 62.345 66.667 10.86 0.00 43.41 3.13
2438 3016 3.217743 GAGGTAGACCGGCGAGGG 61.218 72.222 9.30 0.00 46.96 4.30
2440 3018 2.821688 GACGAGGTAGACCGGCGAG 61.822 68.421 9.30 0.06 42.08 5.03
2441 3019 2.809861 AAGACGAGGTAGACCGGCGA 62.810 60.000 9.30 0.00 42.08 5.54
2442 3020 1.930908 AAAGACGAGGTAGACCGGCG 61.931 60.000 0.00 0.00 42.08 6.46
2443 3021 0.458025 CAAAGACGAGGTAGACCGGC 60.458 60.000 0.00 0.00 42.08 6.13
2444 3022 0.886563 ACAAAGACGAGGTAGACCGG 59.113 55.000 0.00 0.00 42.08 5.28
2445 3023 1.811359 AGACAAAGACGAGGTAGACCG 59.189 52.381 0.00 0.00 42.08 4.79
2446 3024 3.938289 AAGACAAAGACGAGGTAGACC 57.062 47.619 0.00 0.00 0.00 3.85
2447 3025 4.674885 GCCTAAGACAAAGACGAGGTAGAC 60.675 50.000 0.00 0.00 0.00 2.59
2448 3026 3.442977 GCCTAAGACAAAGACGAGGTAGA 59.557 47.826 0.00 0.00 0.00 2.59
2449 3027 3.429135 GGCCTAAGACAAAGACGAGGTAG 60.429 52.174 0.00 0.00 0.00 3.18
2450 3028 2.494870 GGCCTAAGACAAAGACGAGGTA 59.505 50.000 0.00 0.00 0.00 3.08
2451 3029 1.275573 GGCCTAAGACAAAGACGAGGT 59.724 52.381 0.00 0.00 0.00 3.85
2452 3030 1.275291 TGGCCTAAGACAAAGACGAGG 59.725 52.381 3.32 0.00 0.00 4.63
2453 3031 2.743636 TGGCCTAAGACAAAGACGAG 57.256 50.000 3.32 0.00 0.00 4.18
2454 3032 2.354704 CCATGGCCTAAGACAAAGACGA 60.355 50.000 3.32 0.00 0.00 4.20
2455 3033 2.009774 CCATGGCCTAAGACAAAGACG 58.990 52.381 3.32 0.00 0.00 4.18
2456 3034 3.274288 CTCCATGGCCTAAGACAAAGAC 58.726 50.000 6.96 0.00 0.00 3.01
2457 3035 2.239654 CCTCCATGGCCTAAGACAAAGA 59.760 50.000 6.96 0.00 0.00 2.52
2458 3036 2.648059 CCTCCATGGCCTAAGACAAAG 58.352 52.381 6.96 0.00 0.00 2.77
2459 3037 2.806945 CCTCCATGGCCTAAGACAAA 57.193 50.000 6.96 0.00 0.00 2.83
2471 3049 4.552365 ATCCACCGCGCCTCCATG 62.552 66.667 0.00 0.00 0.00 3.66
2472 3050 3.757248 GAATCCACCGCGCCTCCAT 62.757 63.158 0.00 0.00 0.00 3.41
2473 3051 4.467084 GAATCCACCGCGCCTCCA 62.467 66.667 0.00 0.00 0.00 3.86
2482 3060 0.255033 AGTAAAGGCCGGAATCCACC 59.745 55.000 5.05 0.00 0.00 4.61
2483 3061 1.065709 TCAGTAAAGGCCGGAATCCAC 60.066 52.381 5.05 0.00 0.00 4.02
2484 3062 1.065709 GTCAGTAAAGGCCGGAATCCA 60.066 52.381 5.05 0.00 0.00 3.41
2485 3063 1.664873 GTCAGTAAAGGCCGGAATCC 58.335 55.000 5.05 0.00 0.00 3.01
2486 3064 1.287425 CGTCAGTAAAGGCCGGAATC 58.713 55.000 5.05 0.00 0.00 2.52
2487 3065 0.107848 CCGTCAGTAAAGGCCGGAAT 60.108 55.000 5.05 0.00 41.08 3.01
2488 3066 1.294138 CCGTCAGTAAAGGCCGGAA 59.706 57.895 5.05 0.00 41.08 4.30
2489 3067 2.652095 CCCGTCAGTAAAGGCCGGA 61.652 63.158 5.05 0.00 41.08 5.14
2490 3068 2.125269 CCCGTCAGTAAAGGCCGG 60.125 66.667 0.00 0.00 38.39 6.13
2491 3069 1.153628 CTCCCGTCAGTAAAGGCCG 60.154 63.158 0.00 0.00 0.00 6.13
2492 3070 1.221021 CCTCCCGTCAGTAAAGGCC 59.779 63.158 0.00 0.00 0.00 5.19
2493 3071 1.221021 CCCTCCCGTCAGTAAAGGC 59.779 63.158 0.00 0.00 0.00 4.35
2494 3072 0.981943 AACCCTCCCGTCAGTAAAGG 59.018 55.000 0.00 0.00 0.00 3.11
2495 3073 2.696506 GAAACCCTCCCGTCAGTAAAG 58.303 52.381 0.00 0.00 0.00 1.85
2496 3074 1.001181 CGAAACCCTCCCGTCAGTAAA 59.999 52.381 0.00 0.00 0.00 2.01
2497 3075 0.604578 CGAAACCCTCCCGTCAGTAA 59.395 55.000 0.00 0.00 0.00 2.24
2498 3076 0.540365 ACGAAACCCTCCCGTCAGTA 60.540 55.000 0.00 0.00 29.82 2.74
2499 3077 1.405272 AACGAAACCCTCCCGTCAGT 61.405 55.000 0.00 0.00 35.28 3.41
2500 3078 0.250166 AAACGAAACCCTCCCGTCAG 60.250 55.000 0.00 0.00 35.28 3.51
2501 3079 0.180878 AAAACGAAACCCTCCCGTCA 59.819 50.000 0.00 0.00 35.28 4.35
2502 3080 1.265095 GAAAAACGAAACCCTCCCGTC 59.735 52.381 0.00 0.00 35.28 4.79
2503 3081 1.311859 GAAAAACGAAACCCTCCCGT 58.688 50.000 0.00 0.00 38.24 5.28
2504 3082 0.594602 GGAAAAACGAAACCCTCCCG 59.405 55.000 0.00 0.00 0.00 5.14
2505 3083 1.694844 TGGAAAAACGAAACCCTCCC 58.305 50.000 0.00 0.00 0.00 4.30
2506 3084 2.888414 TCATGGAAAAACGAAACCCTCC 59.112 45.455 0.00 0.00 0.00 4.30
2507 3085 4.783764 ATCATGGAAAAACGAAACCCTC 57.216 40.909 0.00 0.00 0.00 4.30
2508 3086 5.545063 AAATCATGGAAAAACGAAACCCT 57.455 34.783 0.00 0.00 0.00 4.34
2509 3087 6.258947 TCAAAAATCATGGAAAAACGAAACCC 59.741 34.615 0.00 0.00 0.00 4.11
2510 3088 7.011016 ACTCAAAAATCATGGAAAAACGAAACC 59.989 33.333 0.00 0.00 0.00 3.27
2511 3089 7.905126 ACTCAAAAATCATGGAAAAACGAAAC 58.095 30.769 0.00 0.00 0.00 2.78
2512 3090 8.485976 AACTCAAAAATCATGGAAAAACGAAA 57.514 26.923 0.00 0.00 0.00 3.46
2513 3091 8.485976 AAACTCAAAAATCATGGAAAAACGAA 57.514 26.923 0.00 0.00 0.00 3.85
2514 3092 8.386606 CAAAACTCAAAAATCATGGAAAAACGA 58.613 29.630 0.00 0.00 0.00 3.85
2515 3093 8.174422 ACAAAACTCAAAAATCATGGAAAAACG 58.826 29.630 0.00 0.00 0.00 3.60
2516 3094 9.838975 AACAAAACTCAAAAATCATGGAAAAAC 57.161 25.926 0.00 0.00 0.00 2.43
2519 3097 9.323985 CCTAACAAAACTCAAAAATCATGGAAA 57.676 29.630 0.00 0.00 0.00 3.13
2520 3098 8.700051 TCCTAACAAAACTCAAAAATCATGGAA 58.300 29.630 0.00 0.00 0.00 3.53
2521 3099 8.243961 TCCTAACAAAACTCAAAAATCATGGA 57.756 30.769 0.00 0.00 0.00 3.41
2522 3100 9.492973 AATCCTAACAAAACTCAAAAATCATGG 57.507 29.630 0.00 0.00 0.00 3.66
2525 3103 9.883142 ACAAATCCTAACAAAACTCAAAAATCA 57.117 25.926 0.00 0.00 0.00 2.57
2527 3105 9.665719 ACACAAATCCTAACAAAACTCAAAAAT 57.334 25.926 0.00 0.00 0.00 1.82
2528 3106 9.145865 GACACAAATCCTAACAAAACTCAAAAA 57.854 29.630 0.00 0.00 0.00 1.94
2529 3107 7.762159 GGACACAAATCCTAACAAAACTCAAAA 59.238 33.333 0.00 0.00 35.68 2.44
2530 3108 7.262048 GGACACAAATCCTAACAAAACTCAAA 58.738 34.615 0.00 0.00 35.68 2.69
2531 3109 6.801575 GGACACAAATCCTAACAAAACTCAA 58.198 36.000 0.00 0.00 35.68 3.02
2532 3110 6.385649 GGACACAAATCCTAACAAAACTCA 57.614 37.500 0.00 0.00 35.68 3.41
2544 3122 4.938226 CCTTTCTGAGTAGGACACAAATCC 59.062 45.833 2.65 0.00 39.28 3.01
2545 3123 5.409826 CACCTTTCTGAGTAGGACACAAATC 59.590 44.000 13.02 0.00 35.45 2.17
2546 3124 5.071788 TCACCTTTCTGAGTAGGACACAAAT 59.928 40.000 13.02 0.00 35.45 2.32
2547 3125 4.407621 TCACCTTTCTGAGTAGGACACAAA 59.592 41.667 13.02 0.00 35.45 2.83
2548 3126 3.964688 TCACCTTTCTGAGTAGGACACAA 59.035 43.478 13.02 0.00 35.45 3.33
2549 3127 3.572642 TCACCTTTCTGAGTAGGACACA 58.427 45.455 13.02 0.00 35.45 3.72
2550 3128 4.561105 CTTCACCTTTCTGAGTAGGACAC 58.439 47.826 13.02 0.00 35.45 3.67
2551 3129 3.006967 GCTTCACCTTTCTGAGTAGGACA 59.993 47.826 13.02 0.00 35.45 4.02
2552 3130 3.591023 GCTTCACCTTTCTGAGTAGGAC 58.409 50.000 13.02 0.00 35.45 3.85
2553 3131 2.231478 CGCTTCACCTTTCTGAGTAGGA 59.769 50.000 13.02 0.00 35.45 2.94
2554 3132 2.611518 CGCTTCACCTTTCTGAGTAGG 58.388 52.381 6.41 6.41 37.56 3.18
2555 3133 2.611518 CCGCTTCACCTTTCTGAGTAG 58.388 52.381 0.00 0.00 0.00 2.57
2556 3134 1.337823 GCCGCTTCACCTTTCTGAGTA 60.338 52.381 0.00 0.00 0.00 2.59
2557 3135 0.603975 GCCGCTTCACCTTTCTGAGT 60.604 55.000 0.00 0.00 0.00 3.41
2558 3136 1.630244 CGCCGCTTCACCTTTCTGAG 61.630 60.000 0.00 0.00 0.00 3.35
2559 3137 1.667830 CGCCGCTTCACCTTTCTGA 60.668 57.895 0.00 0.00 0.00 3.27
2560 3138 1.667830 TCGCCGCTTCACCTTTCTG 60.668 57.895 0.00 0.00 0.00 3.02
2561 3139 1.668151 GTCGCCGCTTCACCTTTCT 60.668 57.895 0.00 0.00 0.00 2.52
2562 3140 2.861006 GTCGCCGCTTCACCTTTC 59.139 61.111 0.00 0.00 0.00 2.62
2563 3141 3.041940 CGTCGCCGCTTCACCTTT 61.042 61.111 0.00 0.00 0.00 3.11
2568 3146 4.980805 AAAGCCGTCGCCGCTTCA 62.981 61.111 8.83 0.00 32.09 3.02
2569 3147 4.148645 GAAAGCCGTCGCCGCTTC 62.149 66.667 8.83 1.24 32.09 3.86
2570 3148 4.681978 AGAAAGCCGTCGCCGCTT 62.682 61.111 3.26 3.26 33.79 4.68
2573 3151 1.635663 ATTTCAGAAAGCCGTCGCCG 61.636 55.000 1.28 0.00 34.57 6.46
2574 3152 0.179189 CATTTCAGAAAGCCGTCGCC 60.179 55.000 1.28 0.00 34.57 5.54
2575 3153 0.179189 CCATTTCAGAAAGCCGTCGC 60.179 55.000 1.28 0.00 0.00 5.19
2576 3154 1.438651 TCCATTTCAGAAAGCCGTCG 58.561 50.000 1.28 0.00 0.00 5.12
2577 3155 5.449177 CCTTATTCCATTTCAGAAAGCCGTC 60.449 44.000 1.28 0.00 0.00 4.79
2578 3156 4.399303 CCTTATTCCATTTCAGAAAGCCGT 59.601 41.667 1.28 0.00 0.00 5.68
2579 3157 4.399303 ACCTTATTCCATTTCAGAAAGCCG 59.601 41.667 1.28 0.00 0.00 5.52
2580 3158 5.921962 ACCTTATTCCATTTCAGAAAGCC 57.078 39.130 1.28 0.00 0.00 4.35
2581 3159 7.163001 AGAACCTTATTCCATTTCAGAAAGC 57.837 36.000 1.28 0.00 0.00 3.51
2587 3165 9.959721 GGCTATATAGAACCTTATTCCATTTCA 57.040 33.333 14.16 0.00 0.00 2.69
2588 3166 9.397280 GGGCTATATAGAACCTTATTCCATTTC 57.603 37.037 14.16 0.00 0.00 2.17
2589 3167 8.900802 TGGGCTATATAGAACCTTATTCCATTT 58.099 33.333 14.16 0.00 0.00 2.32
2590 3168 8.463055 TGGGCTATATAGAACCTTATTCCATT 57.537 34.615 14.16 0.00 0.00 3.16
2591 3169 8.463055 TTGGGCTATATAGAACCTTATTCCAT 57.537 34.615 14.16 0.00 0.00 3.41
2592 3170 7.881912 TTGGGCTATATAGAACCTTATTCCA 57.118 36.000 14.16 3.79 0.00 3.53
2593 3171 9.397280 GAATTGGGCTATATAGAACCTTATTCC 57.603 37.037 14.16 1.74 0.00 3.01
2594 3172 9.397280 GGAATTGGGCTATATAGAACCTTATTC 57.603 37.037 23.04 23.04 32.02 1.75
2595 3173 8.047310 CGGAATTGGGCTATATAGAACCTTATT 58.953 37.037 14.16 15.31 0.00 1.40
2596 3174 7.365652 CCGGAATTGGGCTATATAGAACCTTAT 60.366 40.741 14.16 9.21 0.00 1.73
2597 3175 6.070424 CCGGAATTGGGCTATATAGAACCTTA 60.070 42.308 14.16 7.57 0.00 2.69
2598 3176 5.280521 CCGGAATTGGGCTATATAGAACCTT 60.281 44.000 14.16 6.13 0.00 3.50
2599 3177 4.225267 CCGGAATTGGGCTATATAGAACCT 59.775 45.833 14.16 0.00 0.00 3.50
2600 3178 4.019591 ACCGGAATTGGGCTATATAGAACC 60.020 45.833 9.46 14.06 0.00 3.62
2601 3179 4.935808 CACCGGAATTGGGCTATATAGAAC 59.064 45.833 9.46 5.65 0.00 3.01
2602 3180 4.019681 CCACCGGAATTGGGCTATATAGAA 60.020 45.833 9.46 0.00 0.00 2.10
2603 3181 3.517901 CCACCGGAATTGGGCTATATAGA 59.482 47.826 9.46 0.00 0.00 1.98
2604 3182 3.263425 ACCACCGGAATTGGGCTATATAG 59.737 47.826 9.46 5.30 38.59 1.31
2605 3183 3.008594 CACCACCGGAATTGGGCTATATA 59.991 47.826 9.46 0.00 38.59 0.86
2606 3184 2.062636 ACCACCGGAATTGGGCTATAT 58.937 47.619 9.46 0.00 38.59 0.86
2607 3185 1.142060 CACCACCGGAATTGGGCTATA 59.858 52.381 9.46 0.00 38.59 1.31
2608 3186 0.106719 CACCACCGGAATTGGGCTAT 60.107 55.000 9.46 0.00 38.59 2.97
2609 3187 1.301623 CACCACCGGAATTGGGCTA 59.698 57.895 9.46 0.00 38.59 3.93
2610 3188 2.035626 CACCACCGGAATTGGGCT 59.964 61.111 9.46 0.00 38.59 5.19
2611 3189 1.468506 AAACACCACCGGAATTGGGC 61.469 55.000 9.46 0.00 38.59 5.36
2612 3190 0.601057 GAAACACCACCGGAATTGGG 59.399 55.000 9.46 3.70 38.59 4.12
2613 3191 1.616159 AGAAACACCACCGGAATTGG 58.384 50.000 9.46 8.57 40.32 3.16
2614 3192 2.161609 GCTAGAAACACCACCGGAATTG 59.838 50.000 9.46 3.62 0.00 2.32
2615 3193 2.224670 TGCTAGAAACACCACCGGAATT 60.225 45.455 9.46 0.00 0.00 2.17
2616 3194 1.349688 TGCTAGAAACACCACCGGAAT 59.650 47.619 9.46 0.00 0.00 3.01
2617 3195 0.759959 TGCTAGAAACACCACCGGAA 59.240 50.000 9.46 0.00 0.00 4.30
2618 3196 0.034337 GTGCTAGAAACACCACCGGA 59.966 55.000 9.46 0.00 31.67 5.14
2619 3197 2.540145 GTGCTAGAAACACCACCGG 58.460 57.895 0.00 0.00 31.67 5.28
2625 3203 0.038892 TCCGACGGTGCTAGAAACAC 60.039 55.000 14.79 0.00 37.31 3.32
2626 3204 0.242825 CTCCGACGGTGCTAGAAACA 59.757 55.000 14.79 0.00 0.00 2.83
2627 3205 0.458025 CCTCCGACGGTGCTAGAAAC 60.458 60.000 14.79 0.00 0.00 2.78
2628 3206 1.601419 CCCTCCGACGGTGCTAGAAA 61.601 60.000 14.79 0.00 0.00 2.52
2629 3207 2.050350 CCCTCCGACGGTGCTAGAA 61.050 63.158 14.79 0.00 0.00 2.10
2630 3208 2.439701 CCCTCCGACGGTGCTAGA 60.440 66.667 14.79 0.00 0.00 2.43
2631 3209 4.208686 GCCCTCCGACGGTGCTAG 62.209 72.222 14.79 3.36 0.00 3.42
2638 3216 4.351938 TTCACACGCCCTCCGACG 62.352 66.667 0.00 0.00 41.02 5.12
2639 3217 2.432628 CTTCACACGCCCTCCGAC 60.433 66.667 0.00 0.00 41.02 4.79
2640 3218 2.915659 ACTTCACACGCCCTCCGA 60.916 61.111 0.00 0.00 41.02 4.55
2641 3219 2.738521 CACTTCACACGCCCTCCG 60.739 66.667 0.00 0.00 44.21 4.63
2642 3220 1.668151 GACACTTCACACGCCCTCC 60.668 63.158 0.00 0.00 0.00 4.30
2643 3221 0.667792 GAGACACTTCACACGCCCTC 60.668 60.000 0.00 0.00 0.00 4.30
2644 3222 1.367840 GAGACACTTCACACGCCCT 59.632 57.895 0.00 0.00 0.00 5.19
2645 3223 1.668151 GGAGACACTTCACACGCCC 60.668 63.158 0.00 0.00 0.00 6.13
2646 3224 0.531974 TTGGAGACACTTCACACGCC 60.532 55.000 0.00 0.00 42.67 5.68
2647 3225 0.582005 GTTGGAGACACTTCACACGC 59.418 55.000 0.00 0.00 42.67 5.34
2648 3226 0.852777 CGTTGGAGACACTTCACACG 59.147 55.000 0.00 0.00 42.67 4.49
2649 3227 1.202486 TCCGTTGGAGACACTTCACAC 60.202 52.381 0.00 0.00 42.67 3.82
2650 3228 1.116308 TCCGTTGGAGACACTTCACA 58.884 50.000 0.00 0.00 42.67 3.58
2651 3229 2.028930 AGATCCGTTGGAGACACTTCAC 60.029 50.000 0.00 0.00 42.67 3.18
2652 3230 2.231478 GAGATCCGTTGGAGACACTTCA 59.769 50.000 0.00 0.00 42.67 3.02
2653 3231 2.732597 CGAGATCCGTTGGAGACACTTC 60.733 54.545 0.00 0.00 42.67 3.01
2654 3232 1.202582 CGAGATCCGTTGGAGACACTT 59.797 52.381 0.00 0.00 42.67 3.16
2655 3233 0.811915 CGAGATCCGTTGGAGACACT 59.188 55.000 0.00 0.00 42.67 3.55
2656 3234 3.330766 CGAGATCCGTTGGAGACAC 57.669 57.895 0.00 0.00 42.67 3.67
2666 3244 1.007271 CCGAATCCCACGAGATCCG 60.007 63.158 0.00 2.55 45.44 4.18
2667 3245 0.032267 GACCGAATCCCACGAGATCC 59.968 60.000 0.00 0.00 0.00 3.36
2668 3246 0.744874 TGACCGAATCCCACGAGATC 59.255 55.000 0.00 0.00 0.00 2.75
2669 3247 0.747255 CTGACCGAATCCCACGAGAT 59.253 55.000 0.00 0.00 0.00 2.75
2670 3248 1.945354 GCTGACCGAATCCCACGAGA 61.945 60.000 0.00 0.00 0.00 4.04
2671 3249 1.519455 GCTGACCGAATCCCACGAG 60.519 63.158 0.00 0.00 0.00 4.18
2672 3250 1.613317 ATGCTGACCGAATCCCACGA 61.613 55.000 0.00 0.00 0.00 4.35
2673 3251 0.744414 AATGCTGACCGAATCCCACG 60.744 55.000 0.00 0.00 0.00 4.94
2674 3252 1.133025 CAAATGCTGACCGAATCCCAC 59.867 52.381 0.00 0.00 0.00 4.61
2675 3253 1.271871 ACAAATGCTGACCGAATCCCA 60.272 47.619 0.00 0.00 0.00 4.37
2676 3254 1.401905 GACAAATGCTGACCGAATCCC 59.598 52.381 0.00 0.00 0.00 3.85
2677 3255 2.359900 AGACAAATGCTGACCGAATCC 58.640 47.619 0.00 0.00 0.00 3.01
2678 3256 3.436704 TGAAGACAAATGCTGACCGAATC 59.563 43.478 0.00 0.00 0.00 2.52
2679 3257 3.411446 TGAAGACAAATGCTGACCGAAT 58.589 40.909 0.00 0.00 0.00 3.34
2680 3258 2.807967 CTGAAGACAAATGCTGACCGAA 59.192 45.455 0.00 0.00 0.00 4.30
2681 3259 2.224281 ACTGAAGACAAATGCTGACCGA 60.224 45.455 0.00 0.00 0.00 4.69
2682 3260 2.096069 CACTGAAGACAAATGCTGACCG 60.096 50.000 0.00 0.00 0.00 4.79
2683 3261 2.227388 CCACTGAAGACAAATGCTGACC 59.773 50.000 0.00 0.00 0.00 4.02
2684 3262 3.141398 TCCACTGAAGACAAATGCTGAC 58.859 45.455 0.00 0.00 0.00 3.51
2685 3263 3.490439 TCCACTGAAGACAAATGCTGA 57.510 42.857 0.00 0.00 0.00 4.26
2686 3264 3.128242 GGATCCACTGAAGACAAATGCTG 59.872 47.826 6.95 0.00 0.00 4.41
2687 3265 3.245016 TGGATCCACTGAAGACAAATGCT 60.245 43.478 11.44 0.00 0.00 3.79
2688 3266 3.084039 TGGATCCACTGAAGACAAATGC 58.916 45.455 11.44 0.00 0.00 3.56
2689 3267 3.125829 CGTGGATCCACTGAAGACAAATG 59.874 47.826 35.84 16.44 44.16 2.32
2690 3268 3.244561 ACGTGGATCCACTGAAGACAAAT 60.245 43.478 35.84 12.89 44.16 2.32
2691 3269 2.104111 ACGTGGATCCACTGAAGACAAA 59.896 45.455 35.84 0.00 44.16 2.83
2692 3270 1.691976 ACGTGGATCCACTGAAGACAA 59.308 47.619 35.84 0.00 44.16 3.18
2693 3271 1.000843 CACGTGGATCCACTGAAGACA 59.999 52.381 35.84 0.60 44.16 3.41
2694 3272 1.673033 CCACGTGGATCCACTGAAGAC 60.673 57.143 35.84 13.89 44.16 3.01
2695 3273 0.608130 CCACGTGGATCCACTGAAGA 59.392 55.000 35.84 2.19 44.16 2.87
2696 3274 0.608130 TCCACGTGGATCCACTGAAG 59.392 55.000 35.84 24.87 44.16 3.02
2697 3275 2.753319 TCCACGTGGATCCACTGAA 58.247 52.632 35.84 18.65 44.16 3.02
2698 3276 4.531351 TCCACGTGGATCCACTGA 57.469 55.556 35.84 26.86 44.16 3.41
2707 3285 1.290203 CAAAGATCGGATCCACGTGG 58.710 55.000 29.26 29.26 34.94 4.94
2708 3286 2.010145 ACAAAGATCGGATCCACGTG 57.990 50.000 13.41 9.08 34.94 4.49
2709 3287 2.618053 GAACAAAGATCGGATCCACGT 58.382 47.619 13.41 6.22 34.94 4.49
2710 3288 1.588404 CGAACAAAGATCGGATCCACG 59.412 52.381 13.41 5.62 36.68 4.94
2711 3289 2.603560 GACGAACAAAGATCGGATCCAC 59.396 50.000 13.41 2.42 44.32 4.02
2712 3290 2.496070 AGACGAACAAAGATCGGATCCA 59.504 45.455 13.41 0.00 44.32 3.41
2713 3291 2.860735 CAGACGAACAAAGATCGGATCC 59.139 50.000 14.19 0.00 44.32 3.36
2714 3292 3.304559 CACAGACGAACAAAGATCGGATC 59.695 47.826 10.02 10.02 44.32 3.36
2715 3293 3.254060 CACAGACGAACAAAGATCGGAT 58.746 45.455 0.00 0.00 44.32 4.18
2716 3294 2.035449 ACACAGACGAACAAAGATCGGA 59.965 45.455 0.00 0.00 44.32 4.55
2717 3295 2.404215 ACACAGACGAACAAAGATCGG 58.596 47.619 0.00 0.00 44.32 4.18
2718 3296 4.203828 CAAACACAGACGAACAAAGATCG 58.796 43.478 0.00 0.00 45.47 3.69
2719 3297 4.963953 CACAAACACAGACGAACAAAGATC 59.036 41.667 0.00 0.00 0.00 2.75
2720 3298 4.394920 ACACAAACACAGACGAACAAAGAT 59.605 37.500 0.00 0.00 0.00 2.40
2721 3299 3.749088 ACACAAACACAGACGAACAAAGA 59.251 39.130 0.00 0.00 0.00 2.52
2722 3300 3.845775 CACACAAACACAGACGAACAAAG 59.154 43.478 0.00 0.00 0.00 2.77
2723 3301 3.816091 CACACAAACACAGACGAACAAA 58.184 40.909 0.00 0.00 0.00 2.83
2724 3302 2.413502 GCACACAAACACAGACGAACAA 60.414 45.455 0.00 0.00 0.00 2.83
2725 3303 1.129624 GCACACAAACACAGACGAACA 59.870 47.619 0.00 0.00 0.00 3.18
2726 3304 1.531058 GGCACACAAACACAGACGAAC 60.531 52.381 0.00 0.00 0.00 3.95
2727 3305 0.730265 GGCACACAAACACAGACGAA 59.270 50.000 0.00 0.00 0.00 3.85
2728 3306 0.107897 AGGCACACAAACACAGACGA 60.108 50.000 0.00 0.00 0.00 4.20
2729 3307 1.577468 TAGGCACACAAACACAGACG 58.423 50.000 0.00 0.00 0.00 4.18
2730 3308 4.755123 ACTTATAGGCACACAAACACAGAC 59.245 41.667 0.00 0.00 0.00 3.51
2731 3309 4.968259 ACTTATAGGCACACAAACACAGA 58.032 39.130 0.00 0.00 0.00 3.41
2732 3310 5.451908 CAACTTATAGGCACACAAACACAG 58.548 41.667 0.00 0.00 0.00 3.66
2733 3311 4.277174 CCAACTTATAGGCACACAAACACA 59.723 41.667 0.00 0.00 0.00 3.72
2734 3312 4.517453 TCCAACTTATAGGCACACAAACAC 59.483 41.667 0.00 0.00 0.00 3.32
2735 3313 4.720046 TCCAACTTATAGGCACACAAACA 58.280 39.130 0.00 0.00 0.00 2.83
2736 3314 5.163652 GGATCCAACTTATAGGCACACAAAC 60.164 44.000 6.95 0.00 0.00 2.93
2737 3315 4.947388 GGATCCAACTTATAGGCACACAAA 59.053 41.667 6.95 0.00 0.00 2.83
2738 3316 4.227300 AGGATCCAACTTATAGGCACACAA 59.773 41.667 15.82 0.00 0.00 3.33
2739 3317 3.780294 AGGATCCAACTTATAGGCACACA 59.220 43.478 15.82 0.00 0.00 3.72
2740 3318 4.423625 AGGATCCAACTTATAGGCACAC 57.576 45.455 15.82 0.00 0.00 3.82
2741 3319 4.141482 GGAAGGATCCAACTTATAGGCACA 60.141 45.833 15.82 0.00 45.79 4.57
2742 3320 4.390264 GGAAGGATCCAACTTATAGGCAC 58.610 47.826 15.82 0.00 45.79 5.01
2743 3321 3.071023 CGGAAGGATCCAACTTATAGGCA 59.929 47.826 15.82 0.00 46.97 4.75
2744 3322 3.323979 TCGGAAGGATCCAACTTATAGGC 59.676 47.826 15.82 0.00 46.97 3.93
2745 3323 5.725362 GATCGGAAGGATCCAACTTATAGG 58.275 45.833 15.82 0.00 46.97 2.57
2757 3335 4.798882 AGAGAAGTGTAGATCGGAAGGAT 58.201 43.478 0.00 0.00 38.35 3.24
2758 3336 4.237976 AGAGAAGTGTAGATCGGAAGGA 57.762 45.455 0.00 0.00 0.00 3.36
2759 3337 4.927422 GAAGAGAAGTGTAGATCGGAAGG 58.073 47.826 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.