Multiple sequence alignment - TraesCS4B01G027600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G027600 chr4B 100.000 3365 0 0 1 3365 20726523 20729887 0.000000e+00 6215.0
1 TraesCS4B01G027600 chr4A 89.785 1351 66 27 716 2002 591861416 591862758 0.000000e+00 1664.0
2 TraesCS4B01G027600 chr4A 84.773 926 92 24 2246 3144 591862989 591863892 0.000000e+00 883.0
3 TraesCS4B01G027600 chr4A 81.210 463 39 16 166 607 591860791 591861226 2.500000e-86 329.0
4 TraesCS4B01G027600 chr4A 95.833 48 2 0 98 145 591860755 591860802 1.000000e-10 78.7
5 TraesCS4B01G027600 chr1D 89.189 925 74 16 607 1519 21413125 21412215 0.000000e+00 1131.0
6 TraesCS4B01G027600 chr1D 81.687 415 47 16 211 607 21413738 21413335 5.420000e-83 318.0
7 TraesCS4B01G027600 chr1D 88.186 237 28 0 2015 2251 327998608 327998372 1.980000e-72 283.0
8 TraesCS4B01G027600 chr1D 93.590 78 5 0 71 148 21413825 21413748 2.120000e-22 117.0
9 TraesCS4B01G027600 chr1D 100.000 31 0 0 166 196 21413762 21413732 1.300000e-04 58.4
10 TraesCS4B01G027600 chr1B 83.369 926 79 27 607 1519 35361097 35361960 0.000000e+00 787.0
11 TraesCS4B01G027600 chr1B 85.070 643 65 12 895 1519 35662464 35661835 7.930000e-176 627.0
12 TraesCS4B01G027600 chr1B 84.026 457 43 13 166 605 35360604 35361047 2.420000e-111 412.0
13 TraesCS4B01G027600 chr1B 88.971 272 20 4 607 877 35671767 35671505 9.000000e-86 327.0
14 TraesCS4B01G027600 chr1B 88.760 258 18 5 166 423 35677581 35677335 4.220000e-79 305.0
15 TraesCS4B01G027600 chr1B 92.647 136 10 0 166 301 35214742 35214877 2.650000e-46 196.0
16 TraesCS4B01G027600 chr1B 89.706 136 10 1 166 301 35273967 35274098 1.610000e-38 171.0
17 TraesCS4B01G027600 chr1B 92.000 75 6 0 71 145 35214679 35214753 4.590000e-19 106.0
18 TraesCS4B01G027600 chr1B 91.026 78 7 0 71 148 35677644 35677567 4.590000e-19 106.0
19 TraesCS4B01G027600 chr1B 88.608 79 9 0 71 149 35360541 35360619 2.760000e-16 97.1
20 TraesCS4B01G027600 chr7B 91.023 557 32 12 1444 1991 111269407 111269954 0.000000e+00 736.0
21 TraesCS4B01G027600 chr7B 82.270 564 66 20 774 1326 111268778 111269318 1.100000e-124 457.0
22 TraesCS4B01G027600 chr7D 91.155 554 27 15 1445 1991 148129756 148130294 0.000000e+00 732.0
23 TraesCS4B01G027600 chr7D 92.169 332 26 0 995 1326 148129330 148129661 1.410000e-128 470.0
24 TraesCS4B01G027600 chr7D 83.594 128 19 2 2488 2613 148130573 148130700 5.900000e-23 119.0
25 TraesCS4B01G027600 chr7A 89.492 571 32 17 1428 1991 149167243 149167792 0.000000e+00 697.0
26 TraesCS4B01G027600 chr7A 90.341 352 32 2 995 1344 149166838 149167189 8.510000e-126 460.0
27 TraesCS4B01G027600 chr7A 82.171 129 18 3 2488 2611 149168077 149168205 4.590000e-19 106.0
28 TraesCS4B01G027600 chr7A 100.000 28 0 0 1376 1403 560312991 560313018 6.000000e-03 52.8
29 TraesCS4B01G027600 chr1A 87.251 502 57 2 1016 1517 22985367 22984873 1.750000e-157 566.0
30 TraesCS4B01G027600 chr1A 84.775 289 27 10 166 449 22997844 22997568 1.190000e-69 274.0
31 TraesCS4B01G027600 chr1A 88.152 211 18 6 1608 1817 22991826 22991622 9.330000e-61 244.0
32 TraesCS4B01G027600 chr1A 91.026 78 7 0 71 148 22997907 22997830 4.590000e-19 106.0
33 TraesCS4B01G027600 chr4D 92.373 236 18 0 2015 2250 435601151 435600916 1.500000e-88 337.0
34 TraesCS4B01G027600 chr3A 90.000 240 21 2 2015 2251 738218302 738218541 1.170000e-79 307.0
35 TraesCS4B01G027600 chr6D 89.256 242 20 4 2011 2251 445860061 445859825 7.060000e-77 298.0
36 TraesCS4B01G027600 chr6D 83.607 122 20 0 1839 1960 41207648 41207769 7.630000e-22 115.0
37 TraesCS4B01G027600 chr3B 88.703 239 25 2 2015 2251 617412132 617411894 1.180000e-74 291.0
38 TraesCS4B01G027600 chr2B 90.498 221 19 2 2015 2235 596999859 597000077 1.180000e-74 291.0
39 TraesCS4B01G027600 chr2B 88.235 238 23 4 2015 2250 707966718 707966952 2.560000e-71 279.0
40 TraesCS4B01G027600 chr6B 89.474 228 18 2 2026 2247 655313652 655313425 1.980000e-72 283.0
41 TraesCS4B01G027600 chr6B 88.186 237 26 2 2015 2250 210783049 210783284 7.110000e-72 281.0
42 TraesCS4B01G027600 chr6B 71.810 525 122 22 1449 1963 709020354 709019846 3.520000e-25 126.0
43 TraesCS4B01G027600 chr6B 87.500 88 9 1 1880 1965 96654621 96654534 2.140000e-17 100.0
44 TraesCS4B01G027600 chr5D 84.884 258 33 4 1069 1326 426639489 426639740 4.310000e-64 255.0
45 TraesCS4B01G027600 chr5D 80.328 305 56 4 1445 1747 426639840 426640142 9.390000e-56 228.0
46 TraesCS4B01G027600 chr5B 80.000 305 57 4 1445 1747 516538233 516538535 4.370000e-54 222.0
47 TraesCS4B01G027600 chr5A 80.000 305 57 4 1445 1747 540682006 540682308 4.370000e-54 222.0
48 TraesCS4B01G027600 chr2A 79.195 298 59 3 1452 1747 29721224 29720928 1.580000e-48 204.0
49 TraesCS4B01G027600 chr3D 83.333 216 32 3 2275 2489 461371155 461371367 2.650000e-46 196.0
50 TraesCS4B01G027600 chr6A 83.607 122 20 0 1839 1960 51761300 51761421 7.630000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G027600 chr4B 20726523 20729887 3364 False 6215.000000 6215 100.000000 1 3365 1 chr4B.!!$F1 3364
1 TraesCS4B01G027600 chr4A 591860755 591863892 3137 False 738.675000 1664 87.900250 98 3144 4 chr4A.!!$F1 3046
2 TraesCS4B01G027600 chr1D 21412215 21413825 1610 True 406.100000 1131 91.116500 71 1519 4 chr1D.!!$R2 1448
3 TraesCS4B01G027600 chr1B 35661835 35662464 629 True 627.000000 627 85.070000 895 1519 1 chr1B.!!$R1 624
4 TraesCS4B01G027600 chr1B 35360541 35361960 1419 False 432.033333 787 85.334333 71 1519 3 chr1B.!!$F3 1448
5 TraesCS4B01G027600 chr7B 111268778 111269954 1176 False 596.500000 736 86.646500 774 1991 2 chr7B.!!$F1 1217
6 TraesCS4B01G027600 chr7D 148129330 148130700 1370 False 440.333333 732 88.972667 995 2613 3 chr7D.!!$F1 1618
7 TraesCS4B01G027600 chr7A 149166838 149168205 1367 False 421.000000 697 87.334667 995 2611 3 chr7A.!!$F2 1616
8 TraesCS4B01G027600 chr5D 426639489 426640142 653 False 241.500000 255 82.606000 1069 1747 2 chr5D.!!$F1 678

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
46 47 0.034059 GAGGTCGGCAGTCCATATGG 59.966 60.0 16.25 16.25 0.0 2.74 F
1771 2175 0.039035 ACGCCTTCTCCTCTCACTCT 59.961 55.0 0.00 0.00 0.0 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2002 2446 0.526662 ACGGAGTAGTAGTGCAGTGC 59.473 55.0 8.58 8.58 41.94 4.40 R
2671 3283 0.316689 GACCGCGGTTCAAAACTGTG 60.317 55.0 34.65 0.00 45.56 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.516365 AGAATGCTCTGCTTTCCTTTTG 57.484 40.909 12.45 0.00 41.56 2.44
22 23 2.738013 ATGCTCTGCTTTCCTTTTGC 57.262 45.000 0.00 0.00 0.00 3.68
23 24 1.696063 TGCTCTGCTTTCCTTTTGCT 58.304 45.000 0.00 0.00 0.00 3.91
24 25 1.338973 TGCTCTGCTTTCCTTTTGCTG 59.661 47.619 0.00 0.00 0.00 4.41
25 26 1.933949 GCTCTGCTTTCCTTTTGCTGC 60.934 52.381 0.00 0.00 0.00 5.25
26 27 1.612463 CTCTGCTTTCCTTTTGCTGCT 59.388 47.619 0.00 0.00 0.00 4.24
27 28 1.338973 TCTGCTTTCCTTTTGCTGCTG 59.661 47.619 0.00 0.00 0.00 4.41
28 29 1.338973 CTGCTTTCCTTTTGCTGCTGA 59.661 47.619 0.00 0.00 0.00 4.26
29 30 1.338973 TGCTTTCCTTTTGCTGCTGAG 59.661 47.619 0.00 0.00 0.00 3.35
30 31 1.336609 GCTTTCCTTTTGCTGCTGAGG 60.337 52.381 0.00 5.74 0.00 3.86
31 32 1.959282 CTTTCCTTTTGCTGCTGAGGT 59.041 47.619 13.43 0.00 0.00 3.85
32 33 1.609208 TTCCTTTTGCTGCTGAGGTC 58.391 50.000 13.43 0.00 0.00 3.85
33 34 0.603707 TCCTTTTGCTGCTGAGGTCG 60.604 55.000 13.43 0.00 0.00 4.79
34 35 1.580845 CCTTTTGCTGCTGAGGTCGG 61.581 60.000 0.00 0.00 0.00 4.79
42 43 3.303189 CTGAGGTCGGCAGTCCAT 58.697 61.111 2.78 0.00 0.00 3.41
43 44 2.504920 CTGAGGTCGGCAGTCCATA 58.495 57.895 2.78 0.00 0.00 2.74
44 45 1.043816 CTGAGGTCGGCAGTCCATAT 58.956 55.000 2.78 0.00 0.00 1.78
45 46 0.752658 TGAGGTCGGCAGTCCATATG 59.247 55.000 2.78 0.00 0.00 1.78
46 47 0.034059 GAGGTCGGCAGTCCATATGG 59.966 60.000 16.25 16.25 0.00 2.74
47 48 1.071471 GGTCGGCAGTCCATATGGG 59.929 63.158 21.78 7.01 35.41 4.00
48 49 1.598130 GTCGGCAGTCCATATGGGC 60.598 63.158 19.15 19.15 40.99 5.36
61 62 5.416013 GTCCATATGGGCTTAGATTTTAGGC 59.584 44.000 19.49 0.00 36.72 3.93
62 63 5.313240 TCCATATGGGCTTAGATTTTAGGCT 59.687 40.000 21.78 0.00 37.15 4.58
63 64 5.649831 CCATATGGGCTTAGATTTTAGGCTC 59.350 44.000 14.52 0.00 37.15 4.70
64 65 3.194005 TGGGCTTAGATTTTAGGCTCG 57.806 47.619 0.00 0.00 37.15 5.03
65 66 1.874231 GGGCTTAGATTTTAGGCTCGC 59.126 52.381 0.00 0.00 37.15 5.03
66 67 1.527311 GGCTTAGATTTTAGGCTCGCG 59.473 52.381 0.00 0.00 34.40 5.87
67 68 1.070510 GCTTAGATTTTAGGCTCGCGC 60.071 52.381 0.00 0.00 0.00 6.86
68 69 2.201732 CTTAGATTTTAGGCTCGCGCA 58.798 47.619 8.75 0.00 38.10 6.09
69 70 2.526304 TAGATTTTAGGCTCGCGCAT 57.474 45.000 8.75 0.00 38.10 4.73
76 77 1.448985 TAGGCTCGCGCATTTCTTTT 58.551 45.000 8.75 0.00 38.10 2.27
95 96 2.450609 TCGAAGCTTTAGCCGAACTT 57.549 45.000 0.00 0.00 43.38 2.66
96 97 2.762745 TCGAAGCTTTAGCCGAACTTT 58.237 42.857 0.00 0.00 43.38 2.66
107 108 3.460103 AGCCGAACTTTTCTTCGTTGTA 58.540 40.909 1.11 0.00 41.24 2.41
133 134 3.444742 CCATAGCTTCACTTGCAATGGAA 59.555 43.478 0.00 6.18 0.00 3.53
134 135 4.082081 CCATAGCTTCACTTGCAATGGAAA 60.082 41.667 0.00 0.00 0.00 3.13
135 136 5.472148 CATAGCTTCACTTGCAATGGAAAA 58.528 37.500 0.00 0.00 0.00 2.29
136 137 3.721035 AGCTTCACTTGCAATGGAAAAC 58.279 40.909 0.00 2.69 0.00 2.43
137 138 3.132646 AGCTTCACTTGCAATGGAAAACA 59.867 39.130 0.00 0.00 0.00 2.83
138 139 4.060205 GCTTCACTTGCAATGGAAAACAT 58.940 39.130 0.00 0.00 43.07 2.71
139 140 5.010922 AGCTTCACTTGCAATGGAAAACATA 59.989 36.000 0.00 0.00 39.40 2.29
140 141 5.346822 GCTTCACTTGCAATGGAAAACATAG 59.653 40.000 0.00 0.00 39.40 2.23
141 142 6.647334 TTCACTTGCAATGGAAAACATAGA 57.353 33.333 0.00 0.00 39.40 1.98
142 143 6.258230 TCACTTGCAATGGAAAACATAGAG 57.742 37.500 0.00 0.00 39.40 2.43
143 144 6.003326 TCACTTGCAATGGAAAACATAGAGA 58.997 36.000 0.00 0.00 39.40 3.10
144 145 6.489700 TCACTTGCAATGGAAAACATAGAGAA 59.510 34.615 0.00 0.00 39.40 2.87
145 146 7.177216 TCACTTGCAATGGAAAACATAGAGAAT 59.823 33.333 0.00 0.00 39.40 2.40
146 147 7.816031 CACTTGCAATGGAAAACATAGAGAATT 59.184 33.333 0.00 0.00 39.40 2.17
147 148 8.370182 ACTTGCAATGGAAAACATAGAGAATTT 58.630 29.630 0.00 0.00 39.40 1.82
148 149 9.211485 CTTGCAATGGAAAACATAGAGAATTTT 57.789 29.630 0.00 0.00 39.40 1.82
149 150 9.558396 TTGCAATGGAAAACATAGAGAATTTTT 57.442 25.926 0.00 0.00 39.40 1.94
196 217 7.746703 AGAGAAATTCAACCACTAAAGTACCT 58.253 34.615 0.00 0.00 0.00 3.08
197 218 8.877195 AGAGAAATTCAACCACTAAAGTACCTA 58.123 33.333 0.00 0.00 0.00 3.08
198 219 8.843885 AGAAATTCAACCACTAAAGTACCTAC 57.156 34.615 0.00 0.00 0.00 3.18
199 220 8.434392 AGAAATTCAACCACTAAAGTACCTACA 58.566 33.333 0.00 0.00 0.00 2.74
200 221 8.983702 AAATTCAACCACTAAAGTACCTACAA 57.016 30.769 0.00 0.00 0.00 2.41
201 222 8.617290 AATTCAACCACTAAAGTACCTACAAG 57.383 34.615 0.00 0.00 0.00 3.16
202 223 6.982160 TCAACCACTAAAGTACCTACAAGA 57.018 37.500 0.00 0.00 0.00 3.02
203 224 6.752168 TCAACCACTAAAGTACCTACAAGAC 58.248 40.000 0.00 0.00 0.00 3.01
204 225 6.324512 TCAACCACTAAAGTACCTACAAGACA 59.675 38.462 0.00 0.00 0.00 3.41
205 226 6.930068 ACCACTAAAGTACCTACAAGACAT 57.070 37.500 0.00 0.00 0.00 3.06
206 227 6.698380 ACCACTAAAGTACCTACAAGACATG 58.302 40.000 0.00 0.00 0.00 3.21
207 228 6.269307 ACCACTAAAGTACCTACAAGACATGT 59.731 38.462 0.00 0.00 46.36 3.21
208 229 7.452501 ACCACTAAAGTACCTACAAGACATGTA 59.547 37.037 0.00 0.00 43.63 2.29
272 293 2.930040 CGTACGACAGAGATTGGCAAAT 59.070 45.455 10.44 0.00 32.77 2.32
275 296 5.918576 CGTACGACAGAGATTGGCAAATATA 59.081 40.000 10.44 0.00 32.77 0.86
301 322 1.070601 CATATCGACAGGGGCATCACA 59.929 52.381 0.00 0.00 0.00 3.58
302 323 1.199615 TATCGACAGGGGCATCACAA 58.800 50.000 0.00 0.00 0.00 3.33
303 324 0.327924 ATCGACAGGGGCATCACAAA 59.672 50.000 0.00 0.00 0.00 2.83
307 328 2.450476 GACAGGGGCATCACAAAGATT 58.550 47.619 0.00 0.00 33.72 2.40
308 329 2.165030 GACAGGGGCATCACAAAGATTG 59.835 50.000 0.00 0.00 33.72 2.67
309 330 1.479323 CAGGGGCATCACAAAGATTGG 59.521 52.381 0.00 0.00 33.72 3.16
310 331 0.176449 GGGGCATCACAAAGATTGGC 59.824 55.000 0.00 0.00 33.72 4.52
311 332 0.896923 GGGCATCACAAAGATTGGCA 59.103 50.000 0.00 0.00 33.72 4.92
312 333 1.275856 GGGCATCACAAAGATTGGCAA 59.724 47.619 0.68 0.68 33.72 4.52
313 334 2.289569 GGGCATCACAAAGATTGGCAAA 60.290 45.455 3.01 0.00 33.72 3.68
314 335 3.602483 GGCATCACAAAGATTGGCAAAT 58.398 40.909 3.01 0.00 33.72 2.32
315 336 4.382901 GGGCATCACAAAGATTGGCAAATA 60.383 41.667 3.01 0.00 33.72 1.40
316 337 5.362263 GGCATCACAAAGATTGGCAAATAT 58.638 37.500 3.01 0.00 33.72 1.28
317 338 6.462768 GGGCATCACAAAGATTGGCAAATATA 60.463 38.462 3.01 0.00 33.72 0.86
318 339 6.421801 GGCATCACAAAGATTGGCAAATATAC 59.578 38.462 3.01 0.00 33.72 1.47
319 340 6.421801 GCATCACAAAGATTGGCAAATATACC 59.578 38.462 3.01 0.00 33.72 2.73
320 341 7.490840 CATCACAAAGATTGGCAAATATACCA 58.509 34.615 3.01 0.00 33.72 3.25
321 342 6.862209 TCACAAAGATTGGCAAATATACCAC 58.138 36.000 3.01 0.00 35.10 4.16
327 348 2.992593 TGGCAAATATACCACGCAAGA 58.007 42.857 0.00 0.00 43.62 3.02
328 349 3.550820 TGGCAAATATACCACGCAAGAT 58.449 40.909 0.00 0.00 43.62 2.40
347 368 5.193663 AGATGTCAGTCAATATCGTGAGG 57.806 43.478 0.00 0.00 0.00 3.86
423 444 1.002468 GATGATTTCCCCAACGATGCG 60.002 52.381 0.00 0.00 0.00 4.73
440 461 1.421410 GCGCATCGAGAAACACCGAT 61.421 55.000 0.30 0.00 45.17 4.18
541 592 0.388907 GAAACAGGTACGTAGCGGCA 60.389 55.000 22.05 0.00 0.00 5.69
552 603 1.153369 TAGCGGCACAAGATCTGGC 60.153 57.895 1.45 0.35 0.00 4.85
578 632 2.962421 GTGTCTAGGATCAGGGAGAAGG 59.038 54.545 0.00 0.00 0.00 3.46
617 889 1.339727 GGACCAGGTACCATTGGACAC 60.340 57.143 23.52 14.40 37.89 3.67
671 947 0.733150 GTAACCGGAAGAGCAATGCC 59.267 55.000 9.46 0.00 0.00 4.40
692 969 5.409214 TGCCAACCTACGTAAGAAATGTTAC 59.591 40.000 0.00 0.00 43.62 2.50
763 1068 3.857157 TGTTATATTCCACCTCAGCCC 57.143 47.619 0.00 0.00 0.00 5.19
781 1086 2.934553 GCCCTTACGTTAATCACCTGTC 59.065 50.000 0.00 0.00 0.00 3.51
782 1087 3.184541 CCCTTACGTTAATCACCTGTCG 58.815 50.000 0.00 0.00 0.00 4.35
867 1172 3.987745 TCTAATCCAAGCAGAGTCTCCT 58.012 45.455 0.00 0.00 0.00 3.69
883 1192 1.136147 CCTTCACGCATGCAGCTTC 59.864 57.895 19.57 0.00 42.61 3.86
930 1241 4.943705 CCTATTTAAGCTTGCACTCTTGGA 59.056 41.667 9.86 0.24 0.00 3.53
974 1285 1.135315 GCCATTGCCATACACACACAG 60.135 52.381 0.00 0.00 0.00 3.66
975 1286 1.135315 CCATTGCCATACACACACAGC 60.135 52.381 0.00 0.00 0.00 4.40
976 1287 1.814394 CATTGCCATACACACACAGCT 59.186 47.619 0.00 0.00 0.00 4.24
995 1315 3.351450 GTTCCAACCAAGCCGACC 58.649 61.111 0.00 0.00 0.00 4.79
996 1316 2.281208 TTCCAACCAAGCCGACCG 60.281 61.111 0.00 0.00 0.00 4.79
998 1318 2.999739 TTCCAACCAAGCCGACCGAC 63.000 60.000 0.00 0.00 0.00 4.79
999 1319 3.047877 CAACCAAGCCGACCGACC 61.048 66.667 0.00 0.00 0.00 4.79
1050 1420 2.426183 CGCCGACGAAGAGACAACG 61.426 63.158 0.00 0.00 43.93 4.10
1311 1684 0.392729 CCGTCCTCGTCTACTCCACT 60.393 60.000 0.00 0.00 35.01 4.00
1318 1691 1.374343 CGTCTACTCCACTAGCGGCA 61.374 60.000 1.45 0.00 0.00 5.69
1329 1702 1.133761 ACTAGCGGCATCTCAGGTAGA 60.134 52.381 1.45 0.00 41.43 2.59
1373 1753 6.036735 ACAACATACAATATTTTCTCCGTCCG 59.963 38.462 0.00 0.00 0.00 4.79
1408 1788 6.202954 GTCGTAGAAATGGATAGAAATGGGTG 59.797 42.308 0.00 0.00 39.69 4.61
1409 1789 6.055588 CGTAGAAATGGATAGAAATGGGTGT 58.944 40.000 0.00 0.00 0.00 4.16
1421 1801 5.990668 AGAAATGGGTGTGTATCTAGAACC 58.009 41.667 0.00 0.00 0.00 3.62
1425 1805 5.097742 TGGGTGTGTATCTAGAACCAATG 57.902 43.478 11.71 0.00 32.28 2.82
1434 1814 2.009774 CTAGAACCAATGGTCGCCTTG 58.990 52.381 4.95 1.21 33.12 3.61
1771 2175 0.039035 ACGCCTTCTCCTCTCACTCT 59.961 55.000 0.00 0.00 0.00 3.24
1795 2211 0.945099 TAGCTAGCTCGTGGTGATCG 59.055 55.000 23.26 0.00 0.00 3.69
1797 2213 1.299468 CTAGCTCGTGGTGATCGCC 60.299 63.158 18.84 18.84 0.00 5.54
1831 2270 9.410556 CTGTACATATATGATGATTTGTCGTCA 57.589 33.333 19.63 3.12 39.61 4.35
2002 2446 1.078708 GTACGTGGTGGGACCCATG 60.079 63.158 18.51 9.85 45.37 3.66
2003 2447 2.961893 TACGTGGTGGGACCCATGC 61.962 63.158 18.51 4.26 43.99 4.06
2005 2449 2.676471 GTGGTGGGACCCATGCAC 60.676 66.667 18.51 8.44 37.50 4.57
2009 2453 3.578286 TGGGACCCATGCACTGCA 61.578 61.111 9.95 6.09 44.86 4.41
2010 2454 3.064324 GGGACCCATGCACTGCAC 61.064 66.667 5.67 0.00 43.04 4.57
2012 2456 1.299648 GGACCCATGCACTGCACTA 59.700 57.895 5.67 0.00 43.04 2.74
2013 2457 1.026718 GGACCCATGCACTGCACTAC 61.027 60.000 5.67 0.00 43.04 2.73
2015 2459 1.207089 GACCCATGCACTGCACTACTA 59.793 52.381 5.67 0.00 43.04 1.82
2016 2460 1.066143 ACCCATGCACTGCACTACTAC 60.066 52.381 5.67 0.00 43.04 2.73
2017 2461 1.208052 CCCATGCACTGCACTACTACT 59.792 52.381 5.67 0.00 43.04 2.57
2018 2462 2.544685 CCATGCACTGCACTACTACTC 58.455 52.381 5.67 0.00 43.04 2.59
2019 2463 2.544685 CATGCACTGCACTACTACTCC 58.455 52.381 5.67 0.00 43.04 3.85
2020 2464 0.526211 TGCACTGCACTACTACTCCG 59.474 55.000 0.00 0.00 31.71 4.63
2021 2465 0.526662 GCACTGCACTACTACTCCGT 59.473 55.000 0.00 0.00 0.00 4.69
2022 2466 1.467713 GCACTGCACTACTACTCCGTC 60.468 57.143 0.00 0.00 0.00 4.79
2023 2467 2.085320 CACTGCACTACTACTCCGTCT 58.915 52.381 0.00 0.00 0.00 4.18
2024 2468 2.085320 ACTGCACTACTACTCCGTCTG 58.915 52.381 0.00 0.00 0.00 3.51
2025 2469 2.085320 CTGCACTACTACTCCGTCTGT 58.915 52.381 0.00 0.00 0.00 3.41
2026 2470 2.488545 CTGCACTACTACTCCGTCTGTT 59.511 50.000 0.00 0.00 0.00 3.16
2027 2471 2.889045 TGCACTACTACTCCGTCTGTTT 59.111 45.455 0.00 0.00 0.00 2.83
2028 2472 3.057736 TGCACTACTACTCCGTCTGTTTC 60.058 47.826 0.00 0.00 0.00 2.78
2029 2473 3.190953 GCACTACTACTCCGTCTGTTTCT 59.809 47.826 0.00 0.00 0.00 2.52
2030 2474 4.321082 GCACTACTACTCCGTCTGTTTCTT 60.321 45.833 0.00 0.00 0.00 2.52
2031 2475 5.770417 CACTACTACTCCGTCTGTTTCTTT 58.230 41.667 0.00 0.00 0.00 2.52
2032 2476 6.214399 CACTACTACTCCGTCTGTTTCTTTT 58.786 40.000 0.00 0.00 0.00 2.27
2033 2477 6.700520 CACTACTACTCCGTCTGTTTCTTTTT 59.299 38.462 0.00 0.00 0.00 1.94
2034 2478 7.864379 CACTACTACTCCGTCTGTTTCTTTTTA 59.136 37.037 0.00 0.00 0.00 1.52
2035 2479 8.081025 ACTACTACTCCGTCTGTTTCTTTTTAG 58.919 37.037 0.00 0.00 0.00 1.85
2036 2480 6.814043 ACTACTCCGTCTGTTTCTTTTTAGT 58.186 36.000 0.00 0.00 0.00 2.24
2037 2481 7.270779 ACTACTCCGTCTGTTTCTTTTTAGTT 58.729 34.615 0.00 0.00 0.00 2.24
2038 2482 6.997239 ACTCCGTCTGTTTCTTTTTAGTTT 57.003 33.333 0.00 0.00 0.00 2.66
2039 2483 6.782150 ACTCCGTCTGTTTCTTTTTAGTTTG 58.218 36.000 0.00 0.00 0.00 2.93
2040 2484 5.575019 TCCGTCTGTTTCTTTTTAGTTTGC 58.425 37.500 0.00 0.00 0.00 3.68
2041 2485 5.124138 TCCGTCTGTTTCTTTTTAGTTTGCA 59.876 36.000 0.00 0.00 0.00 4.08
2042 2486 5.977129 CCGTCTGTTTCTTTTTAGTTTGCAT 59.023 36.000 0.00 0.00 0.00 3.96
2043 2487 7.012515 TCCGTCTGTTTCTTTTTAGTTTGCATA 59.987 33.333 0.00 0.00 0.00 3.14
2044 2488 7.807907 CCGTCTGTTTCTTTTTAGTTTGCATAT 59.192 33.333 0.00 0.00 0.00 1.78
2045 2489 9.820229 CGTCTGTTTCTTTTTAGTTTGCATATA 57.180 29.630 0.00 0.00 0.00 0.86
2060 2504 9.777297 AGTTTGCATATAAAATTTGGTCAAAGT 57.223 25.926 0.00 0.00 33.32 2.66
2062 2506 9.770097 TTTGCATATAAAATTTGGTCAAAGTCA 57.230 25.926 0.00 0.00 33.32 3.41
2063 2507 9.770097 TTGCATATAAAATTTGGTCAAAGTCAA 57.230 25.926 0.00 0.00 33.32 3.18
2064 2508 9.770097 TGCATATAAAATTTGGTCAAAGTCAAA 57.230 25.926 0.00 0.00 37.29 2.69
2144 2588 9.923143 AAATCAATATTGTTAGATGCATCATGG 57.077 29.630 27.81 8.97 0.00 3.66
2146 2590 8.694581 TCAATATTGTTAGATGCATCATGGAA 57.305 30.769 27.81 14.98 0.00 3.53
2167 2611 7.715657 TGGAATGAATTTTCATACCATACAGC 58.284 34.615 6.24 0.00 46.60 4.40
2168 2612 6.857964 GGAATGAATTTTCATACCATACAGCG 59.142 38.462 6.24 0.00 46.60 5.18
2169 2613 6.942532 ATGAATTTTCATACCATACAGCGT 57.057 33.333 4.00 0.00 45.54 5.07
2170 2614 6.751514 TGAATTTTCATACCATACAGCGTT 57.248 33.333 0.00 0.00 31.01 4.84
2171 2615 7.851387 TGAATTTTCATACCATACAGCGTTA 57.149 32.000 0.00 0.00 31.01 3.18
2175 2619 9.555727 AATTTTCATACCATACAGCGTTAGTAT 57.444 29.630 0.00 0.00 32.62 2.12
2177 2621 6.887626 TCATACCATACAGCGTTAGTATCA 57.112 37.500 0.00 0.00 30.08 2.15
2178 2622 7.462571 TCATACCATACAGCGTTAGTATCAT 57.537 36.000 0.00 0.00 30.08 2.45
2179 2623 8.570068 TCATACCATACAGCGTTAGTATCATA 57.430 34.615 0.00 0.00 30.08 2.15
2180 2624 8.674607 TCATACCATACAGCGTTAGTATCATAG 58.325 37.037 0.00 0.00 30.08 2.23
2181 2625 8.674607 CATACCATACAGCGTTAGTATCATAGA 58.325 37.037 0.00 0.00 30.08 1.98
2182 2626 7.704578 ACCATACAGCGTTAGTATCATAGAT 57.295 36.000 0.00 0.00 30.08 1.98
2183 2627 7.539436 ACCATACAGCGTTAGTATCATAGATG 58.461 38.462 0.00 0.00 30.08 2.90
2186 2630 8.854312 CATACAGCGTTAGTATCATAGATGTTG 58.146 37.037 0.00 0.00 30.08 3.33
2189 2633 7.013942 ACAGCGTTAGTATCATAGATGTTGGTA 59.986 37.037 0.00 0.00 0.00 3.25
2190 2634 8.029522 CAGCGTTAGTATCATAGATGTTGGTAT 58.970 37.037 0.00 0.00 0.00 2.73
2191 2635 8.585881 AGCGTTAGTATCATAGATGTTGGTATT 58.414 33.333 0.00 0.00 0.00 1.89
2192 2636 9.204570 GCGTTAGTATCATAGATGTTGGTATTT 57.795 33.333 0.00 0.00 0.00 1.40
2236 2680 7.164230 ACTTTGTGTAATTTGACTTTGACCA 57.836 32.000 0.00 0.00 0.00 4.02
2237 2681 7.607250 ACTTTGTGTAATTTGACTTTGACCAA 58.393 30.769 0.00 0.00 0.00 3.67
2238 2682 8.091449 ACTTTGTGTAATTTGACTTTGACCAAA 58.909 29.630 0.00 0.00 36.80 3.28
2240 2684 8.641499 TTGTGTAATTTGACTTTGACCAAATC 57.359 30.769 0.00 0.00 40.78 2.17
2241 2685 8.006298 TGTGTAATTTGACTTTGACCAAATCT 57.994 30.769 0.00 0.00 40.78 2.40
2242 2686 8.474025 TGTGTAATTTGACTTTGACCAAATCTT 58.526 29.630 0.00 0.00 40.78 2.40
2243 2687 9.959749 GTGTAATTTGACTTTGACCAAATCTTA 57.040 29.630 0.00 0.00 40.78 2.10
2249 2693 7.936496 TGACTTTGACCAAATCTTATATGCA 57.064 32.000 0.00 0.00 0.00 3.96
2250 2694 7.988737 TGACTTTGACCAAATCTTATATGCAG 58.011 34.615 0.00 0.00 0.00 4.41
2254 2852 5.192176 TGACCAAATCTTATATGCAGTGCA 58.808 37.500 22.22 22.22 44.86 4.57
2260 2858 2.880268 TCTTATATGCAGTGCACATGCC 59.120 45.455 27.26 15.89 43.04 4.40
2265 2863 2.643995 TGCAGTGCACATGCCTATAT 57.356 45.000 27.26 1.79 43.18 0.86
2276 2879 8.035394 GTGCACATGCCTATATAGTACTATTGT 58.965 37.037 20.21 13.26 41.18 2.71
2307 2910 3.149648 GTGGGTCCCATGCCATGC 61.150 66.667 15.49 0.00 35.28 4.06
2324 2927 2.425592 CCGGTGTCACTTCAGCCA 59.574 61.111 2.35 0.00 32.99 4.75
2331 2934 3.123804 GTGTCACTTCAGCCATATACGG 58.876 50.000 0.00 0.00 0.00 4.02
2335 2938 1.202651 ACTTCAGCCATATACGGTGCC 60.203 52.381 0.00 0.00 0.00 5.01
2337 2940 0.105964 TCAGCCATATACGGTGCCAC 59.894 55.000 0.00 0.00 0.00 5.01
2342 2949 0.937699 CATATACGGTGCCACGTCGG 60.938 60.000 6.04 0.00 45.08 4.79
2372 2979 4.895224 ACGTCTACGAATGAGATTAGCA 57.105 40.909 9.86 0.00 43.02 3.49
2374 2981 3.975670 CGTCTACGAATGAGATTAGCACC 59.024 47.826 0.00 0.00 43.02 5.01
2375 2982 4.497507 CGTCTACGAATGAGATTAGCACCA 60.498 45.833 0.00 0.00 43.02 4.17
2377 2984 6.567891 CGTCTACGAATGAGATTAGCACCATA 60.568 42.308 0.00 0.00 43.02 2.74
2378 2985 7.316640 GTCTACGAATGAGATTAGCACCATAT 58.683 38.462 0.00 0.00 0.00 1.78
2379 2986 7.815068 GTCTACGAATGAGATTAGCACCATATT 59.185 37.037 0.00 0.00 0.00 1.28
2380 2987 8.367911 TCTACGAATGAGATTAGCACCATATTT 58.632 33.333 0.00 0.00 0.00 1.40
2381 2988 7.194607 ACGAATGAGATTAGCACCATATTTG 57.805 36.000 0.00 0.00 0.00 2.32
2382 2989 6.082338 CGAATGAGATTAGCACCATATTTGC 58.918 40.000 0.00 0.00 40.52 3.68
2383 2990 6.293571 CGAATGAGATTAGCACCATATTTGCA 60.294 38.462 8.45 0.00 42.83 4.08
2384 2991 5.756195 TGAGATTAGCACCATATTTGCAC 57.244 39.130 8.45 0.00 42.83 4.57
2385 2992 4.273235 TGAGATTAGCACCATATTTGCACG 59.727 41.667 8.45 0.00 42.83 5.34
2386 2993 4.199310 AGATTAGCACCATATTTGCACGT 58.801 39.130 8.45 0.00 42.83 4.49
2387 2994 4.640201 AGATTAGCACCATATTTGCACGTT 59.360 37.500 8.45 0.00 42.83 3.99
2388 2995 2.919666 AGCACCATATTTGCACGTTC 57.080 45.000 8.45 0.00 42.83 3.95
2389 2996 2.158559 AGCACCATATTTGCACGTTCA 58.841 42.857 8.45 0.00 42.83 3.18
2390 2997 2.754552 AGCACCATATTTGCACGTTCAT 59.245 40.909 8.45 0.00 42.83 2.57
2406 3013 4.336993 ACGTTCATGTGCCAAGTTTTAGAA 59.663 37.500 0.00 0.00 0.00 2.10
2407 3014 5.009610 ACGTTCATGTGCCAAGTTTTAGAAT 59.990 36.000 0.00 0.00 0.00 2.40
2409 3016 6.446318 GTTCATGTGCCAAGTTTTAGAATCA 58.554 36.000 0.00 0.00 0.00 2.57
2417 3024 5.625311 GCCAAGTTTTAGAATCAGTTTGACG 59.375 40.000 0.00 0.00 0.00 4.35
2433 3040 9.574458 TCAGTTTGACGTATTTTTCAAATTCAA 57.426 25.926 0.00 0.00 42.24 2.69
2474 3081 7.800155 TTATGACAAGTTCAAACATCACTGA 57.200 32.000 0.00 0.00 37.92 3.41
2546 3155 4.903045 TGGTCCCTTTTTACTACCTCTG 57.097 45.455 0.00 0.00 0.00 3.35
2615 3227 3.106242 AGCGTGTCTTGATGTGTGTTA 57.894 42.857 0.00 0.00 0.00 2.41
2616 3228 3.059884 AGCGTGTCTTGATGTGTGTTAG 58.940 45.455 0.00 0.00 0.00 2.34
2618 3230 3.247648 GCGTGTCTTGATGTGTGTTAGTT 59.752 43.478 0.00 0.00 0.00 2.24
2624 3236 8.342634 GTGTCTTGATGTGTGTTAGTTGTTAAT 58.657 33.333 0.00 0.00 0.00 1.40
2628 3240 9.329913 CTTGATGTGTGTTAGTTGTTAATAAGC 57.670 33.333 0.00 0.00 0.00 3.09
2630 3242 6.230849 TGTGTGTTAGTTGTTAATAAGCGG 57.769 37.500 0.00 0.00 0.00 5.52
2638 3250 6.229936 AGTTGTTAATAAGCGGGATCACTA 57.770 37.500 0.00 0.00 0.00 2.74
2639 3251 6.281405 AGTTGTTAATAAGCGGGATCACTAG 58.719 40.000 0.00 0.00 0.00 2.57
2645 3257 0.684479 AGCGGGATCACTAGTGCAGA 60.684 55.000 18.45 1.19 0.00 4.26
2665 3277 6.651755 CAGAATGCAAACAGTTTGAAACTT 57.348 33.333 27.16 10.92 43.26 2.66
2669 3281 7.603784 AGAATGCAAACAGTTTGAAACTTCTTT 59.396 29.630 27.16 8.84 43.26 2.52
2671 3283 5.637387 TGCAAACAGTTTGAAACTTCTTTCC 59.363 36.000 27.16 7.41 43.26 3.13
2672 3284 5.637387 GCAAACAGTTTGAAACTTCTTTCCA 59.363 36.000 27.16 0.00 43.26 3.53
2673 3285 6.401047 GCAAACAGTTTGAAACTTCTTTCCAC 60.401 38.462 27.16 2.99 43.26 4.02
2680 3297 7.384932 AGTTTGAAACTTCTTTCCACAGTTTTG 59.615 33.333 4.45 0.00 40.15 2.44
2687 3304 0.378962 TTCCACAGTTTTGAACCGCG 59.621 50.000 0.00 0.00 0.00 6.46
2693 3310 0.661020 AGTTTTGAACCGCGGTCTTG 59.339 50.000 34.29 4.06 0.00 3.02
2706 3323 1.742411 CGGTCTTGTGTGAAGGTGTGT 60.742 52.381 0.00 0.00 0.00 3.72
2715 3332 1.906574 GTGAAGGTGTGTGATAGGGGA 59.093 52.381 0.00 0.00 0.00 4.81
2716 3333 2.505819 GTGAAGGTGTGTGATAGGGGAT 59.494 50.000 0.00 0.00 0.00 3.85
2718 3335 2.877154 AGGTGTGTGATAGGGGATCT 57.123 50.000 0.00 0.00 35.37 2.75
2723 3340 2.091499 TGTGTGATAGGGGATCTACCGT 60.091 50.000 0.00 0.00 40.11 4.83
2732 3349 2.664015 GGGATCTACCGTACAAGACCT 58.336 52.381 0.00 0.00 40.11 3.85
2736 3353 5.315348 GGATCTACCGTACAAGACCTAGAT 58.685 45.833 0.00 0.00 31.48 1.98
2760 3377 0.737367 CGTCTGCGATTGCTCCTCAA 60.737 55.000 6.47 0.00 43.34 3.02
2762 3379 2.012673 GTCTGCGATTGCTCCTCAAAT 58.987 47.619 6.47 0.00 43.34 2.32
2773 3390 2.548057 GCTCCTCAAATCACACACGAAA 59.452 45.455 0.00 0.00 0.00 3.46
2813 3430 3.247724 TCGGGAGAGCTATCCGGA 58.752 61.111 28.08 28.08 43.98 5.14
2820 3437 0.466124 AGAGCTATCCGGAACAAGCC 59.534 55.000 24.99 18.54 35.54 4.35
2829 3446 2.225068 CGGAACAAGCCGTATGAGAT 57.775 50.000 0.00 0.00 46.07 2.75
2830 3447 1.860950 CGGAACAAGCCGTATGAGATG 59.139 52.381 0.00 0.00 46.07 2.90
2837 3454 3.099267 AGCCGTATGAGATGTGCTAAC 57.901 47.619 0.00 0.00 0.00 2.34
2847 3464 2.092753 AGATGTGCTAACCATCCCACAG 60.093 50.000 0.00 0.00 40.99 3.66
2859 3476 4.463891 ACCATCCCACAGAATTTGCTTAAG 59.536 41.667 0.00 0.00 0.00 1.85
2860 3477 4.142093 CCATCCCACAGAATTTGCTTAAGG 60.142 45.833 4.29 0.00 0.00 2.69
2875 3492 6.542574 TGCTTAAGGAAAATGTTTGCATTG 57.457 33.333 4.29 0.00 43.89 2.82
2879 3496 7.360017 GCTTAAGGAAAATGTTTGCATTGGTAC 60.360 37.037 4.29 0.00 43.89 3.34
2881 3498 3.122780 GGAAAATGTTTGCATTGGTACGC 59.877 43.478 0.00 0.00 43.89 4.42
2890 3507 6.931840 TGTTTGCATTGGTACGCTATATCATA 59.068 34.615 0.00 0.00 0.00 2.15
2896 3513 5.287170 TGGTACGCTATATCATACACGAC 57.713 43.478 0.00 0.00 0.00 4.34
2928 3545 1.051812 AGCTTGTGCGATAGGGCTAT 58.948 50.000 0.00 0.00 45.42 2.97
2930 3547 1.941668 GCTTGTGCGATAGGGCTATCC 60.942 57.143 0.00 0.00 38.91 2.59
2935 3552 2.169352 GTGCGATAGGGCTATCCATCAT 59.831 50.000 0.00 0.00 38.91 2.45
2938 3563 3.033909 CGATAGGGCTATCCATCATCCA 58.966 50.000 0.00 0.00 38.91 3.41
2951 3576 3.305267 CCATCATCCACGCTTTTCAAACA 60.305 43.478 0.00 0.00 0.00 2.83
2952 3577 4.487948 CATCATCCACGCTTTTCAAACAT 58.512 39.130 0.00 0.00 0.00 2.71
2954 3579 4.545610 TCATCCACGCTTTTCAAACATTC 58.454 39.130 0.00 0.00 0.00 2.67
2982 3607 3.753797 TGGCAACATATCGCAAACAGTTA 59.246 39.130 0.00 0.00 46.17 2.24
3014 3639 0.179137 GGACGACATCACGATCTGCA 60.179 55.000 0.00 0.00 37.03 4.41
3021 3646 2.684881 ACATCACGATCTGCAAAATCCC 59.315 45.455 0.00 0.00 0.00 3.85
3029 3654 2.738743 TCTGCAAAATCCCCCAGATTC 58.261 47.619 0.00 0.00 44.75 2.52
3042 3667 2.387160 CCCAGATTCCCCTCCCTATAGA 59.613 54.545 0.00 0.00 0.00 1.98
3043 3668 3.014574 CCCAGATTCCCCTCCCTATAGAT 59.985 52.174 0.00 0.00 0.00 1.98
3067 3692 2.483014 TTAGCGTGTAACAAGGGCAT 57.517 45.000 0.00 0.00 35.74 4.40
3069 3694 1.616159 AGCGTGTAACAAGGGCATTT 58.384 45.000 0.00 0.00 35.74 2.32
3082 3707 3.515562 AGGGCATTTCCGAGAGATATCT 58.484 45.455 4.47 4.47 34.94 1.98
3087 3712 4.480541 CATTTCCGAGAGATATCTGGACG 58.519 47.826 10.74 12.03 0.00 4.79
3097 3722 4.986783 AGATATCTGGACGGTGAGATGTA 58.013 43.478 3.89 0.00 31.29 2.29
3108 3733 6.592607 GGACGGTGAGATGTAAAGTTAATCAA 59.407 38.462 0.00 0.00 0.00 2.57
3114 3739 7.544566 GTGAGATGTAAAGTTAATCAACGGAGA 59.455 37.037 0.00 0.00 39.78 3.71
3144 3773 6.100004 TGGTGAAACGATAGAGAATTCAGAC 58.900 40.000 8.44 0.00 38.12 3.51
3145 3774 6.100004 GGTGAAACGATAGAGAATTCAGACA 58.900 40.000 8.44 0.00 38.12 3.41
3146 3775 6.758886 GGTGAAACGATAGAGAATTCAGACAT 59.241 38.462 8.44 0.00 38.12 3.06
3147 3776 7.278868 GGTGAAACGATAGAGAATTCAGACATT 59.721 37.037 8.44 0.00 38.12 2.71
3148 3777 8.660373 GTGAAACGATAGAGAATTCAGACATTT 58.340 33.333 8.44 0.00 41.38 2.32
3149 3778 8.873830 TGAAACGATAGAGAATTCAGACATTTC 58.126 33.333 8.44 8.86 41.38 2.17
3150 3779 8.777865 AAACGATAGAGAATTCAGACATTTCA 57.222 30.769 8.44 0.00 41.38 2.69
3151 3780 8.954950 AACGATAGAGAATTCAGACATTTCAT 57.045 30.769 8.44 0.00 41.38 2.57
3152 3781 8.362860 ACGATAGAGAATTCAGACATTTCATG 57.637 34.615 8.44 0.00 41.38 3.07
3153 3782 7.984050 ACGATAGAGAATTCAGACATTTCATGT 59.016 33.333 8.44 0.00 43.46 3.21
3154 3783 9.468532 CGATAGAGAATTCAGACATTTCATGTA 57.531 33.333 8.44 0.00 41.17 2.29
3158 3787 8.457261 AGAGAATTCAGACATTTCATGTAAAGC 58.543 33.333 8.44 0.00 45.03 3.51
3159 3788 7.246311 AGAATTCAGACATTTCATGTAAAGCG 58.754 34.615 8.44 0.00 45.03 4.68
3160 3789 4.944962 TCAGACATTTCATGTAAAGCGG 57.055 40.909 0.00 0.00 45.03 5.52
3161 3790 4.323417 TCAGACATTTCATGTAAAGCGGT 58.677 39.130 0.00 0.00 45.03 5.68
3162 3791 4.759693 TCAGACATTTCATGTAAAGCGGTT 59.240 37.500 0.00 0.00 45.03 4.44
3163 3792 5.240623 TCAGACATTTCATGTAAAGCGGTTT 59.759 36.000 17.67 17.67 45.03 3.27
3164 3793 5.569059 CAGACATTTCATGTAAAGCGGTTTC 59.431 40.000 17.03 8.97 45.03 2.78
3165 3794 4.472286 ACATTTCATGTAAAGCGGTTTCG 58.528 39.130 17.03 4.27 42.78 3.46
3166 3795 4.214545 ACATTTCATGTAAAGCGGTTTCGA 59.785 37.500 17.03 4.62 42.78 3.71
3167 3796 4.398549 TTTCATGTAAAGCGGTTTCGAG 57.601 40.909 17.03 5.71 39.00 4.04
3168 3797 3.306917 TCATGTAAAGCGGTTTCGAGA 57.693 42.857 17.03 7.96 39.00 4.04
3169 3798 3.250744 TCATGTAAAGCGGTTTCGAGAG 58.749 45.455 17.03 4.67 39.00 3.20
3170 3799 3.057104 TCATGTAAAGCGGTTTCGAGAGA 60.057 43.478 17.03 6.93 39.00 3.10
3171 3800 3.587797 TGTAAAGCGGTTTCGAGAGAT 57.412 42.857 17.03 0.00 41.60 2.75
3172 3801 4.707030 TGTAAAGCGGTTTCGAGAGATA 57.293 40.909 17.03 0.00 41.60 1.98
3173 3802 5.258456 TGTAAAGCGGTTTCGAGAGATAT 57.742 39.130 17.03 0.00 41.60 1.63
3174 3803 5.279384 TGTAAAGCGGTTTCGAGAGATATC 58.721 41.667 17.03 0.00 41.60 1.63
3175 3804 4.657436 AAAGCGGTTTCGAGAGATATCT 57.343 40.909 4.47 4.47 41.60 1.98
3176 3805 3.634568 AGCGGTTTCGAGAGATATCTG 57.365 47.619 10.74 0.00 41.60 2.90
3177 3806 2.294791 AGCGGTTTCGAGAGATATCTGG 59.705 50.000 10.74 0.00 41.60 3.86
3178 3807 2.293677 GCGGTTTCGAGAGATATCTGGA 59.706 50.000 10.74 0.00 41.60 3.86
3179 3808 3.854045 GCGGTTTCGAGAGATATCTGGAC 60.854 52.174 10.74 0.00 41.60 4.02
3180 3809 3.566322 CGGTTTCGAGAGATATCTGGACT 59.434 47.826 10.74 0.46 41.60 3.85
3181 3810 4.555708 CGGTTTCGAGAGATATCTGGACTG 60.556 50.000 10.74 1.31 41.60 3.51
3182 3811 4.339814 GGTTTCGAGAGATATCTGGACTGT 59.660 45.833 10.74 0.00 41.60 3.55
3183 3812 5.277825 GTTTCGAGAGATATCTGGACTGTG 58.722 45.833 10.74 0.00 41.60 3.66
3184 3813 4.423625 TCGAGAGATATCTGGACTGTGA 57.576 45.455 10.74 0.00 33.31 3.58
3185 3814 4.384940 TCGAGAGATATCTGGACTGTGAG 58.615 47.826 10.74 0.00 33.31 3.51
3186 3815 4.101741 TCGAGAGATATCTGGACTGTGAGA 59.898 45.833 10.74 0.00 33.31 3.27
3187 3816 5.003160 CGAGAGATATCTGGACTGTGAGAT 58.997 45.833 10.74 4.75 33.43 2.75
3188 3817 5.106594 CGAGAGATATCTGGACTGTGAGATG 60.107 48.000 10.74 0.00 31.29 2.90
3189 3818 4.523943 AGAGATATCTGGACTGTGAGATGC 59.476 45.833 10.74 0.00 31.29 3.91
3190 3819 4.221530 AGATATCTGGACTGTGAGATGCA 58.778 43.478 3.89 0.00 31.29 3.96
3191 3820 4.652881 AGATATCTGGACTGTGAGATGCAA 59.347 41.667 3.89 0.00 31.29 4.08
3192 3821 3.928005 ATCTGGACTGTGAGATGCAAT 57.072 42.857 0.00 0.00 0.00 3.56
3193 3822 2.981898 TCTGGACTGTGAGATGCAATG 58.018 47.619 0.00 0.00 0.00 2.82
3194 3823 2.303890 TCTGGACTGTGAGATGCAATGT 59.696 45.455 0.00 0.00 0.00 2.71
3195 3824 3.079578 CTGGACTGTGAGATGCAATGTT 58.920 45.455 0.00 0.00 0.00 2.71
3196 3825 4.020307 TCTGGACTGTGAGATGCAATGTTA 60.020 41.667 0.00 0.00 0.00 2.41
3197 3826 4.650734 TGGACTGTGAGATGCAATGTTAA 58.349 39.130 0.00 0.00 0.00 2.01
3198 3827 5.255687 TGGACTGTGAGATGCAATGTTAAT 58.744 37.500 0.00 0.00 0.00 1.40
3199 3828 5.355071 TGGACTGTGAGATGCAATGTTAATC 59.645 40.000 0.00 0.00 0.00 1.75
3200 3829 5.355071 GGACTGTGAGATGCAATGTTAATCA 59.645 40.000 0.00 0.00 0.00 2.57
3201 3830 6.127925 GGACTGTGAGATGCAATGTTAATCAA 60.128 38.462 0.00 0.00 0.00 2.57
3202 3831 6.615088 ACTGTGAGATGCAATGTTAATCAAC 58.385 36.000 0.00 0.00 35.06 3.18
3203 3832 5.630061 TGTGAGATGCAATGTTAATCAACG 58.370 37.500 0.00 0.00 37.48 4.10
3204 3833 5.030295 GTGAGATGCAATGTTAATCAACGG 58.970 41.667 0.00 0.00 37.48 4.44
3205 3834 4.940654 TGAGATGCAATGTTAATCAACGGA 59.059 37.500 0.00 0.00 37.48 4.69
3206 3835 5.414144 TGAGATGCAATGTTAATCAACGGAA 59.586 36.000 0.00 0.00 37.48 4.30
3207 3836 6.072230 TGAGATGCAATGTTAATCAACGGAAA 60.072 34.615 0.00 0.00 37.48 3.13
3208 3837 6.686630 AGATGCAATGTTAATCAACGGAAAA 58.313 32.000 0.00 0.00 37.48 2.29
3209 3838 7.151308 AGATGCAATGTTAATCAACGGAAAAA 58.849 30.769 0.00 0.00 37.48 1.94
3210 3839 6.517914 TGCAATGTTAATCAACGGAAAAAC 57.482 33.333 0.00 0.00 37.48 2.43
3211 3840 6.042777 TGCAATGTTAATCAACGGAAAAACA 58.957 32.000 0.00 0.00 37.48 2.83
3212 3841 6.019479 TGCAATGTTAATCAACGGAAAAACAC 60.019 34.615 0.00 0.00 35.71 3.32
3213 3842 6.200097 GCAATGTTAATCAACGGAAAAACACT 59.800 34.615 0.00 0.00 35.71 3.55
3214 3843 7.554732 CAATGTTAATCAACGGAAAAACACTG 58.445 34.615 0.00 0.00 35.71 3.66
3215 3844 6.438259 TGTTAATCAACGGAAAAACACTGA 57.562 33.333 0.00 0.00 37.48 3.41
3216 3845 6.491394 TGTTAATCAACGGAAAAACACTGAG 58.509 36.000 0.00 0.00 37.48 3.35
3217 3846 4.568152 AATCAACGGAAAAACACTGAGG 57.432 40.909 0.00 0.00 0.00 3.86
3218 3847 3.269538 TCAACGGAAAAACACTGAGGA 57.730 42.857 0.00 0.00 0.00 3.71
3219 3848 3.815809 TCAACGGAAAAACACTGAGGAT 58.184 40.909 0.00 0.00 0.00 3.24
3220 3849 4.204012 TCAACGGAAAAACACTGAGGATT 58.796 39.130 0.00 0.00 0.00 3.01
3221 3850 4.642885 TCAACGGAAAAACACTGAGGATTT 59.357 37.500 0.00 0.00 0.00 2.17
3222 3851 5.126384 TCAACGGAAAAACACTGAGGATTTT 59.874 36.000 0.00 0.00 0.00 1.82
3223 3852 4.932146 ACGGAAAAACACTGAGGATTTTG 58.068 39.130 0.00 0.00 0.00 2.44
3224 3853 4.642885 ACGGAAAAACACTGAGGATTTTGA 59.357 37.500 0.00 0.00 0.00 2.69
3225 3854 5.301805 ACGGAAAAACACTGAGGATTTTGAT 59.698 36.000 0.00 0.00 0.00 2.57
3226 3855 6.488683 ACGGAAAAACACTGAGGATTTTGATA 59.511 34.615 0.00 0.00 0.00 2.15
3227 3856 7.013846 ACGGAAAAACACTGAGGATTTTGATAA 59.986 33.333 0.00 0.00 0.00 1.75
3228 3857 7.865385 CGGAAAAACACTGAGGATTTTGATAAA 59.135 33.333 0.00 0.00 0.00 1.40
3229 3858 9.710900 GGAAAAACACTGAGGATTTTGATAAAT 57.289 29.630 0.00 0.00 36.68 1.40
3248 3877 8.192774 TGATAAATTGATTTTCTGACATGAGGC 58.807 33.333 0.00 0.00 0.00 4.70
3249 3878 5.988310 AATTGATTTTCTGACATGAGGCA 57.012 34.783 0.00 0.00 0.00 4.75
3250 3879 6.540438 AATTGATTTTCTGACATGAGGCAT 57.460 33.333 0.00 0.00 0.00 4.40
3251 3880 5.988310 TTGATTTTCTGACATGAGGCATT 57.012 34.783 0.00 0.00 0.00 3.56
3252 3881 5.319140 TGATTTTCTGACATGAGGCATTG 57.681 39.130 0.00 0.00 0.00 2.82
3253 3882 3.581024 TTTTCTGACATGAGGCATTGC 57.419 42.857 0.00 0.00 0.00 3.56
3263 3892 2.894919 GGCATTGCCCTGCGAAAT 59.105 55.556 17.28 0.00 44.06 2.17
3264 3893 2.114638 GGCATTGCCCTGCGAAATA 58.885 52.632 17.28 0.00 44.06 1.40
3265 3894 0.675633 GGCATTGCCCTGCGAAATAT 59.324 50.000 17.28 0.00 44.06 1.28
3266 3895 1.885887 GGCATTGCCCTGCGAAATATA 59.114 47.619 17.28 0.00 44.06 0.86
3267 3896 2.295909 GGCATTGCCCTGCGAAATATAA 59.704 45.455 17.28 0.00 44.06 0.98
3268 3897 3.243704 GGCATTGCCCTGCGAAATATAAA 60.244 43.478 17.28 0.00 44.06 1.40
3269 3898 3.735746 GCATTGCCCTGCGAAATATAAAC 59.264 43.478 0.00 0.00 31.49 2.01
3270 3899 4.298332 CATTGCCCTGCGAAATATAAACC 58.702 43.478 0.00 0.00 0.00 3.27
3271 3900 1.944024 TGCCCTGCGAAATATAAACCG 59.056 47.619 0.00 0.00 0.00 4.44
3272 3901 1.334689 GCCCTGCGAAATATAAACCGC 60.335 52.381 0.00 0.00 46.82 5.68
3273 3902 1.265905 CCCTGCGAAATATAAACCGCC 59.734 52.381 11.59 0.00 46.18 6.13
3274 3903 1.070175 CCTGCGAAATATAAACCGCCG 60.070 52.381 11.59 6.88 46.18 6.46
3275 3904 1.595794 CTGCGAAATATAAACCGCCGT 59.404 47.619 11.59 0.00 46.18 5.68
3276 3905 1.328069 TGCGAAATATAAACCGCCGTG 59.672 47.619 11.59 0.00 46.18 4.94
3277 3906 1.593933 GCGAAATATAAACCGCCGTGA 59.406 47.619 0.00 0.00 41.59 4.35
3278 3907 2.222445 GCGAAATATAAACCGCCGTGAT 59.778 45.455 0.00 0.00 41.59 3.06
3279 3908 3.794536 CGAAATATAAACCGCCGTGATG 58.205 45.455 0.00 0.00 0.00 3.07
3280 3909 3.363575 CGAAATATAAACCGCCGTGATGG 60.364 47.826 0.00 0.00 42.50 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.305881 GCAAAAGGAAAGCAGAGCATTCT 60.306 43.478 6.87 0.00 36.64 2.40
1 2 2.991866 GCAAAAGGAAAGCAGAGCATTC 59.008 45.455 0.00 0.00 35.83 2.67
2 3 2.631545 AGCAAAAGGAAAGCAGAGCATT 59.368 40.909 0.00 0.00 0.00 3.56
3 4 2.029290 CAGCAAAAGGAAAGCAGAGCAT 60.029 45.455 0.00 0.00 0.00 3.79
4 5 1.338973 CAGCAAAAGGAAAGCAGAGCA 59.661 47.619 0.00 0.00 0.00 4.26
5 6 1.933949 GCAGCAAAAGGAAAGCAGAGC 60.934 52.381 0.00 0.00 0.00 4.09
6 7 1.612463 AGCAGCAAAAGGAAAGCAGAG 59.388 47.619 0.00 0.00 0.00 3.35
7 8 1.338973 CAGCAGCAAAAGGAAAGCAGA 59.661 47.619 0.00 0.00 0.00 4.26
8 9 1.338973 TCAGCAGCAAAAGGAAAGCAG 59.661 47.619 0.00 0.00 0.00 4.24
9 10 1.338973 CTCAGCAGCAAAAGGAAAGCA 59.661 47.619 0.00 0.00 0.00 3.91
10 11 1.336609 CCTCAGCAGCAAAAGGAAAGC 60.337 52.381 0.00 0.00 0.00 3.51
11 12 1.959282 ACCTCAGCAGCAAAAGGAAAG 59.041 47.619 13.18 0.00 32.99 2.62
12 13 1.956477 GACCTCAGCAGCAAAAGGAAA 59.044 47.619 13.18 0.00 32.99 3.13
13 14 1.609208 GACCTCAGCAGCAAAAGGAA 58.391 50.000 13.18 0.00 32.99 3.36
14 15 0.603707 CGACCTCAGCAGCAAAAGGA 60.604 55.000 13.18 0.00 32.99 3.36
15 16 1.580845 CCGACCTCAGCAGCAAAAGG 61.581 60.000 0.00 0.22 34.94 3.11
16 17 1.871772 CCGACCTCAGCAGCAAAAG 59.128 57.895 0.00 0.00 0.00 2.27
17 18 2.260869 GCCGACCTCAGCAGCAAAA 61.261 57.895 0.00 0.00 0.00 2.44
18 19 2.669569 GCCGACCTCAGCAGCAAA 60.670 61.111 0.00 0.00 0.00 3.68
19 20 3.939939 TGCCGACCTCAGCAGCAA 61.940 61.111 0.00 0.00 33.08 3.91
23 24 3.695606 GGACTGCCGACCTCAGCA 61.696 66.667 0.00 0.00 35.04 4.41
24 25 1.676678 TATGGACTGCCGACCTCAGC 61.677 60.000 0.00 0.00 36.79 4.26
25 26 1.043816 ATATGGACTGCCGACCTCAG 58.956 55.000 0.00 0.00 36.79 3.35
26 27 0.752658 CATATGGACTGCCGACCTCA 59.247 55.000 0.00 0.00 36.79 3.86
27 28 0.034059 CCATATGGACTGCCGACCTC 59.966 60.000 17.49 0.00 37.39 3.85
28 29 1.410850 CCCATATGGACTGCCGACCT 61.411 60.000 24.00 0.00 37.39 3.85
29 30 1.071471 CCCATATGGACTGCCGACC 59.929 63.158 24.00 0.00 37.39 4.79
30 31 1.598130 GCCCATATGGACTGCCGAC 60.598 63.158 24.00 0.00 37.39 4.79
31 32 1.344953 AAGCCCATATGGACTGCCGA 61.345 55.000 24.00 0.00 37.39 5.54
32 33 0.396435 TAAGCCCATATGGACTGCCG 59.604 55.000 24.00 6.19 37.39 5.69
33 34 1.699634 TCTAAGCCCATATGGACTGCC 59.300 52.381 24.00 5.85 37.39 4.85
34 35 3.710209 ATCTAAGCCCATATGGACTGC 57.290 47.619 24.00 17.43 37.39 4.40
35 36 6.656693 CCTAAAATCTAAGCCCATATGGACTG 59.343 42.308 24.00 6.19 37.39 3.51
36 37 6.748332 GCCTAAAATCTAAGCCCATATGGACT 60.748 42.308 24.00 14.75 37.39 3.85
37 38 5.416013 GCCTAAAATCTAAGCCCATATGGAC 59.584 44.000 24.00 12.24 37.39 4.02
38 39 5.313240 AGCCTAAAATCTAAGCCCATATGGA 59.687 40.000 24.00 1.76 37.39 3.41
39 40 5.574188 AGCCTAAAATCTAAGCCCATATGG 58.426 41.667 15.41 15.41 37.09 2.74
40 41 5.352569 CGAGCCTAAAATCTAAGCCCATATG 59.647 44.000 0.00 0.00 0.00 1.78
41 42 5.491982 CGAGCCTAAAATCTAAGCCCATAT 58.508 41.667 0.00 0.00 0.00 1.78
42 43 4.802918 GCGAGCCTAAAATCTAAGCCCATA 60.803 45.833 0.00 0.00 0.00 2.74
43 44 3.744660 CGAGCCTAAAATCTAAGCCCAT 58.255 45.455 0.00 0.00 0.00 4.00
44 45 2.745152 GCGAGCCTAAAATCTAAGCCCA 60.745 50.000 0.00 0.00 0.00 5.36
45 46 1.874231 GCGAGCCTAAAATCTAAGCCC 59.126 52.381 0.00 0.00 0.00 5.19
46 47 1.527311 CGCGAGCCTAAAATCTAAGCC 59.473 52.381 0.00 0.00 0.00 4.35
47 48 2.932167 CGCGAGCCTAAAATCTAAGC 57.068 50.000 0.00 0.00 0.00 3.09
59 60 4.861044 TTCGAAAAGAAATGCGCGAGCC 62.861 50.000 12.10 0.00 46.80 4.70
61 62 2.161278 CTTCGAAAAGAAATGCGCGAG 58.839 47.619 12.10 0.00 38.57 5.03
62 63 1.724654 GCTTCGAAAAGAAATGCGCGA 60.725 47.619 12.10 0.00 38.57 5.87
63 64 0.630261 GCTTCGAAAAGAAATGCGCG 59.370 50.000 0.00 0.00 38.57 6.86
64 65 1.969103 AGCTTCGAAAAGAAATGCGC 58.031 45.000 0.00 0.00 38.57 6.09
65 66 4.029529 GCTAAAGCTTCGAAAAGAAATGCG 59.970 41.667 0.00 0.00 38.57 4.73
66 67 4.324669 GGCTAAAGCTTCGAAAAGAAATGC 59.675 41.667 0.00 0.00 38.57 3.56
67 68 4.554973 CGGCTAAAGCTTCGAAAAGAAATG 59.445 41.667 0.00 0.00 38.57 2.32
68 69 4.454504 TCGGCTAAAGCTTCGAAAAGAAAT 59.545 37.500 0.00 0.00 38.57 2.17
69 70 3.810941 TCGGCTAAAGCTTCGAAAAGAAA 59.189 39.130 0.00 0.00 38.57 2.52
76 77 2.450609 AAGTTCGGCTAAAGCTTCGA 57.549 45.000 0.00 0.87 41.70 3.71
107 108 1.073763 TGCAAGTGAAGCTATGGTGGT 59.926 47.619 0.00 0.00 0.00 4.16
147 148 3.258372 TGTTTAGCCCACACACACAAAAA 59.742 39.130 0.00 0.00 0.00 1.94
148 149 2.826128 TGTTTAGCCCACACACACAAAA 59.174 40.909 0.00 0.00 0.00 2.44
149 150 2.447443 TGTTTAGCCCACACACACAAA 58.553 42.857 0.00 0.00 0.00 2.83
150 151 2.130272 TGTTTAGCCCACACACACAA 57.870 45.000 0.00 0.00 0.00 3.33
151 152 2.356665 ATGTTTAGCCCACACACACA 57.643 45.000 0.00 0.00 0.00 3.72
152 153 3.670625 TCTATGTTTAGCCCACACACAC 58.329 45.455 0.00 0.00 0.00 3.82
153 154 3.580895 TCTCTATGTTTAGCCCACACACA 59.419 43.478 0.00 0.00 0.00 3.72
154 155 4.202245 TCTCTATGTTTAGCCCACACAC 57.798 45.455 0.00 0.00 0.00 3.82
155 156 4.901197 TTCTCTATGTTTAGCCCACACA 57.099 40.909 0.00 0.00 0.00 3.72
156 157 6.374333 TGAATTTCTCTATGTTTAGCCCACAC 59.626 38.462 0.00 0.00 0.00 3.82
157 158 6.480763 TGAATTTCTCTATGTTTAGCCCACA 58.519 36.000 0.00 0.00 0.00 4.17
158 159 7.251281 GTTGAATTTCTCTATGTTTAGCCCAC 58.749 38.462 0.00 0.00 0.00 4.61
159 160 6.377146 GGTTGAATTTCTCTATGTTTAGCCCA 59.623 38.462 0.00 0.00 0.00 5.36
160 161 6.377146 TGGTTGAATTTCTCTATGTTTAGCCC 59.623 38.462 0.00 0.00 0.00 5.19
161 162 7.121315 AGTGGTTGAATTTCTCTATGTTTAGCC 59.879 37.037 0.00 0.00 0.00 3.93
162 163 8.045176 AGTGGTTGAATTTCTCTATGTTTAGC 57.955 34.615 0.00 0.00 0.00 3.09
196 217 6.042781 AGGTTTGGTCTTCTACATGTCTTGTA 59.957 38.462 0.00 0.00 39.87 2.41
197 218 5.063880 GGTTTGGTCTTCTACATGTCTTGT 58.936 41.667 0.00 0.00 42.62 3.16
198 219 5.308825 AGGTTTGGTCTTCTACATGTCTTG 58.691 41.667 0.00 0.00 0.00 3.02
199 220 5.071788 TGAGGTTTGGTCTTCTACATGTCTT 59.928 40.000 0.00 0.00 0.00 3.01
200 221 4.593206 TGAGGTTTGGTCTTCTACATGTCT 59.407 41.667 0.00 0.00 0.00 3.41
201 222 4.894784 TGAGGTTTGGTCTTCTACATGTC 58.105 43.478 0.00 0.00 0.00 3.06
202 223 4.974645 TGAGGTTTGGTCTTCTACATGT 57.025 40.909 2.69 2.69 0.00 3.21
203 224 6.824305 AAATGAGGTTTGGTCTTCTACATG 57.176 37.500 0.00 0.00 0.00 3.21
204 225 7.393515 GGTTAAATGAGGTTTGGTCTTCTACAT 59.606 37.037 0.00 0.00 0.00 2.29
205 226 6.713450 GGTTAAATGAGGTTTGGTCTTCTACA 59.287 38.462 0.00 0.00 0.00 2.74
206 227 6.150641 GGGTTAAATGAGGTTTGGTCTTCTAC 59.849 42.308 0.00 0.00 0.00 2.59
207 228 6.243148 GGGTTAAATGAGGTTTGGTCTTCTA 58.757 40.000 0.00 0.00 0.00 2.10
208 229 5.077564 GGGTTAAATGAGGTTTGGTCTTCT 58.922 41.667 0.00 0.00 0.00 2.85
209 230 4.082949 CGGGTTAAATGAGGTTTGGTCTTC 60.083 45.833 0.00 0.00 0.00 2.87
210 231 3.824443 CGGGTTAAATGAGGTTTGGTCTT 59.176 43.478 0.00 0.00 0.00 3.01
211 232 3.418047 CGGGTTAAATGAGGTTTGGTCT 58.582 45.455 0.00 0.00 0.00 3.85
212 233 2.094906 GCGGGTTAAATGAGGTTTGGTC 60.095 50.000 0.00 0.00 0.00 4.02
213 234 1.890489 GCGGGTTAAATGAGGTTTGGT 59.110 47.619 0.00 0.00 0.00 3.67
214 235 1.135517 CGCGGGTTAAATGAGGTTTGG 60.136 52.381 0.00 0.00 0.00 3.28
215 236 1.731098 GCGCGGGTTAAATGAGGTTTG 60.731 52.381 8.83 0.00 0.00 2.93
272 293 3.513912 CCCCTGTCGATATGCTTGGTATA 59.486 47.826 0.00 0.00 0.00 1.47
275 296 0.469917 CCCCTGTCGATATGCTTGGT 59.530 55.000 0.00 0.00 0.00 3.67
282 303 1.423584 TGTGATGCCCCTGTCGATAT 58.576 50.000 0.00 0.00 0.00 1.63
301 322 4.400884 TGCGTGGTATATTTGCCAATCTTT 59.599 37.500 0.00 0.00 39.53 2.52
302 323 3.951037 TGCGTGGTATATTTGCCAATCTT 59.049 39.130 0.00 0.00 39.53 2.40
303 324 3.550820 TGCGTGGTATATTTGCCAATCT 58.449 40.909 0.00 0.00 39.53 2.40
307 328 2.992593 TCTTGCGTGGTATATTTGCCA 58.007 42.857 0.00 0.00 34.94 4.92
308 329 3.315191 ACATCTTGCGTGGTATATTTGCC 59.685 43.478 0.00 0.00 0.00 4.52
309 330 4.035091 TGACATCTTGCGTGGTATATTTGC 59.965 41.667 0.00 0.00 0.00 3.68
310 331 5.294306 ACTGACATCTTGCGTGGTATATTTG 59.706 40.000 0.00 0.00 0.00 2.32
311 332 5.428253 ACTGACATCTTGCGTGGTATATTT 58.572 37.500 0.00 0.00 0.00 1.40
312 333 5.023533 ACTGACATCTTGCGTGGTATATT 57.976 39.130 0.00 0.00 0.00 1.28
313 334 4.099419 TGACTGACATCTTGCGTGGTATAT 59.901 41.667 0.00 0.00 0.00 0.86
314 335 3.445805 TGACTGACATCTTGCGTGGTATA 59.554 43.478 0.00 0.00 0.00 1.47
315 336 2.233676 TGACTGACATCTTGCGTGGTAT 59.766 45.455 0.00 0.00 0.00 2.73
316 337 1.616374 TGACTGACATCTTGCGTGGTA 59.384 47.619 0.00 0.00 0.00 3.25
317 338 0.392706 TGACTGACATCTTGCGTGGT 59.607 50.000 0.00 0.00 0.00 4.16
318 339 1.511850 TTGACTGACATCTTGCGTGG 58.488 50.000 0.00 0.00 0.00 4.94
319 340 4.317628 CGATATTGACTGACATCTTGCGTG 60.318 45.833 0.00 0.00 0.00 5.34
320 341 3.798878 CGATATTGACTGACATCTTGCGT 59.201 43.478 0.00 0.00 0.00 5.24
321 342 3.798878 ACGATATTGACTGACATCTTGCG 59.201 43.478 0.00 0.00 0.00 4.85
327 348 3.493350 GGCCTCACGATATTGACTGACAT 60.493 47.826 0.00 0.00 0.00 3.06
328 349 2.159099 GGCCTCACGATATTGACTGACA 60.159 50.000 0.00 0.00 0.00 3.58
347 368 1.099879 AGCAAGATCATCGGCTTGGC 61.100 55.000 0.00 0.00 41.29 4.52
431 452 2.045561 TGTTGTGTCCATCGGTGTTT 57.954 45.000 0.00 0.00 0.00 2.83
440 461 1.666553 GCGGTCGATGTTGTGTCCA 60.667 57.895 0.00 0.00 0.00 4.02
472 522 4.394712 GTGCTAGGCAGTGGCGGT 62.395 66.667 11.51 0.00 40.08 5.68
473 523 4.393155 TGTGCTAGGCAGTGGCGG 62.393 66.667 11.51 9.48 40.08 6.13
474 524 3.121030 GTGTGCTAGGCAGTGGCG 61.121 66.667 11.51 0.00 40.08 5.69
475 525 2.747855 GGTGTGCTAGGCAGTGGC 60.748 66.667 9.02 9.02 40.08 5.01
476 526 2.434884 CGGTGTGCTAGGCAGTGG 60.435 66.667 0.00 0.00 40.08 4.00
477 527 2.434884 CCGGTGTGCTAGGCAGTG 60.435 66.667 0.00 0.00 40.08 3.66
478 528 3.706373 CCCGGTGTGCTAGGCAGT 61.706 66.667 0.00 0.00 40.08 4.40
479 529 4.473520 CCCCGGTGTGCTAGGCAG 62.474 72.222 0.00 0.00 40.08 4.85
482 532 2.364579 TACCCCCGGTGTGCTAGG 60.365 66.667 0.00 0.00 36.19 3.02
483 533 2.897972 GTACCCCCGGTGTGCTAG 59.102 66.667 0.00 0.00 36.19 3.42
541 592 3.169099 AGACACTACTGCCAGATCTTGT 58.831 45.455 0.00 0.00 0.00 3.16
552 603 4.141287 CTCCCTGATCCTAGACACTACTG 58.859 52.174 0.00 0.00 0.00 2.74
781 1086 3.119316 ACATGTCCAAGAGCTTCTACTCG 60.119 47.826 0.00 0.00 41.77 4.18
782 1087 4.464069 ACATGTCCAAGAGCTTCTACTC 57.536 45.455 0.00 0.00 36.91 2.59
883 1192 1.568612 ATCGTGGTCAAGTGCTTGCG 61.569 55.000 7.03 5.44 40.24 4.85
996 1316 4.424711 TCCTTGGCCGCCATGGTC 62.425 66.667 32.83 4.09 45.58 4.02
999 1319 4.431131 ACCTCCTTGGCCGCCATG 62.431 66.667 14.30 15.69 40.22 3.66
1311 1684 2.294449 ATCTACCTGAGATGCCGCTA 57.706 50.000 0.00 0.00 43.71 4.26
1357 1737 8.823818 CAAGTAATTACGGACGGAGAAAATATT 58.176 33.333 9.91 0.00 0.00 1.28
1358 1738 7.983484 ACAAGTAATTACGGACGGAGAAAATAT 59.017 33.333 9.91 0.00 0.00 1.28
1359 1739 7.322664 ACAAGTAATTACGGACGGAGAAAATA 58.677 34.615 9.91 0.00 0.00 1.40
1360 1740 6.168389 ACAAGTAATTACGGACGGAGAAAAT 58.832 36.000 9.91 0.00 0.00 1.82
1361 1741 5.540911 ACAAGTAATTACGGACGGAGAAAA 58.459 37.500 9.91 0.00 0.00 2.29
1408 1788 3.802685 GCGACCATTGGTTCTAGATACAC 59.197 47.826 10.29 0.00 35.25 2.90
1409 1789 3.181469 GGCGACCATTGGTTCTAGATACA 60.181 47.826 10.29 0.00 35.25 2.29
1660 2052 1.376037 GAAGGTGCCCAAGGTCTCG 60.376 63.158 0.00 0.00 0.00 4.04
1795 2211 2.095978 ATATGTACAGGTCCGGCGGC 62.096 60.000 23.83 16.55 0.00 6.53
1797 2213 2.490509 TCATATATGTACAGGTCCGGCG 59.509 50.000 12.42 0.00 0.00 6.46
1804 2220 8.763049 ACGACAAATCATCATATATGTACAGG 57.237 34.615 12.42 0.00 0.00 4.00
1805 2221 9.410556 TGACGACAAATCATCATATATGTACAG 57.589 33.333 12.42 2.18 0.00 2.74
1831 2270 1.135024 CGCCACCAGCTGCAATTAATT 60.135 47.619 8.66 0.00 40.39 1.40
1941 2384 3.617735 TTGTACAGGACGGCGGCA 61.618 61.111 17.61 0.00 0.00 5.69
2002 2446 0.526662 ACGGAGTAGTAGTGCAGTGC 59.473 55.000 8.58 8.58 41.94 4.40
2016 2460 5.681543 GCAAACTAAAAAGAAACAGACGGAG 59.318 40.000 0.00 0.00 0.00 4.63
2017 2461 5.124138 TGCAAACTAAAAAGAAACAGACGGA 59.876 36.000 0.00 0.00 0.00 4.69
2018 2462 5.336744 TGCAAACTAAAAAGAAACAGACGG 58.663 37.500 0.00 0.00 0.00 4.79
2019 2463 8.728088 ATATGCAAACTAAAAAGAAACAGACG 57.272 30.769 0.00 0.00 0.00 4.18
2034 2478 9.777297 ACTTTGACCAAATTTTATATGCAAACT 57.223 25.926 0.00 0.00 0.00 2.66
2036 2480 9.770097 TGACTTTGACCAAATTTTATATGCAAA 57.230 25.926 0.00 0.00 0.00 3.68
2037 2481 9.770097 TTGACTTTGACCAAATTTTATATGCAA 57.230 25.926 0.00 0.00 0.00 4.08
2038 2482 9.770097 TTTGACTTTGACCAAATTTTATATGCA 57.230 25.926 0.00 0.00 0.00 3.96
2118 2562 9.923143 CCATGATGCATCTAACAATATTGATTT 57.077 29.630 26.32 9.25 0.00 2.17
2119 2563 9.304335 TCCATGATGCATCTAACAATATTGATT 57.696 29.630 26.32 13.80 0.00 2.57
2120 2564 8.873186 TCCATGATGCATCTAACAATATTGAT 57.127 30.769 26.32 12.82 0.00 2.57
2121 2565 8.694581 TTCCATGATGCATCTAACAATATTGA 57.305 30.769 26.32 9.01 0.00 2.57
2122 2566 9.353999 CATTCCATGATGCATCTAACAATATTG 57.646 33.333 26.32 14.01 0.00 1.90
2123 2567 9.304335 TCATTCCATGATGCATCTAACAATATT 57.696 29.630 26.32 2.09 33.59 1.28
2124 2568 8.873186 TCATTCCATGATGCATCTAACAATAT 57.127 30.769 26.32 7.86 33.59 1.28
2125 2569 8.694581 TTCATTCCATGATGCATCTAACAATA 57.305 30.769 26.32 5.68 39.39 1.90
2126 2570 7.591421 TTCATTCCATGATGCATCTAACAAT 57.409 32.000 26.32 15.89 39.39 2.71
2127 2571 7.591421 ATTCATTCCATGATGCATCTAACAA 57.409 32.000 26.32 14.47 39.39 2.83
2128 2572 7.591421 AATTCATTCCATGATGCATCTAACA 57.409 32.000 26.32 8.26 39.39 2.41
2130 2574 8.697292 TGAAAATTCATTCCATGATGCATCTAA 58.303 29.630 26.32 15.39 39.39 2.10
2132 2576 7.119709 TGAAAATTCATTCCATGATGCATCT 57.880 32.000 26.32 10.21 39.39 2.90
2133 2577 7.962964 ATGAAAATTCATTCCATGATGCATC 57.037 32.000 20.14 20.14 45.13 3.91
2144 2588 7.417612 ACGCTGTATGGTATGAAAATTCATTC 58.582 34.615 13.40 8.74 45.13 2.67
2148 2592 7.916552 ACTAACGCTGTATGGTATGAAAATTC 58.083 34.615 0.00 0.00 0.00 2.17
2151 2595 8.198778 TGATACTAACGCTGTATGGTATGAAAA 58.801 33.333 1.19 0.00 31.55 2.29
2153 2597 7.279750 TGATACTAACGCTGTATGGTATGAA 57.720 36.000 1.19 0.00 31.55 2.57
2154 2598 6.887626 TGATACTAACGCTGTATGGTATGA 57.112 37.500 1.19 0.00 31.55 2.15
2157 2601 8.674607 CATCTATGATACTAACGCTGTATGGTA 58.325 37.037 1.19 0.00 31.55 3.25
2158 2602 7.176865 ACATCTATGATACTAACGCTGTATGGT 59.823 37.037 0.00 0.00 31.55 3.55
2159 2603 7.539436 ACATCTATGATACTAACGCTGTATGG 58.461 38.462 0.00 0.00 31.55 2.74
2160 2604 8.854312 CAACATCTATGATACTAACGCTGTATG 58.146 37.037 0.00 0.00 31.55 2.39
2166 2610 8.758633 AATACCAACATCTATGATACTAACGC 57.241 34.615 0.00 0.00 0.00 4.84
2209 2653 9.575783 GGTCAAAGTCAAATTACACAAAGTTTA 57.424 29.630 0.00 0.00 0.00 2.01
2210 2654 8.091449 TGGTCAAAGTCAAATTACACAAAGTTT 58.909 29.630 0.00 0.00 0.00 2.66
2212 2656 7.164230 TGGTCAAAGTCAAATTACACAAAGT 57.836 32.000 0.00 0.00 0.00 2.66
2213 2657 8.472683 TTTGGTCAAAGTCAAATTACACAAAG 57.527 30.769 0.00 0.00 0.00 2.77
2214 2658 9.092876 GATTTGGTCAAAGTCAAATTACACAAA 57.907 29.630 2.55 0.00 41.80 2.83
2215 2659 8.474025 AGATTTGGTCAAAGTCAAATTACACAA 58.526 29.630 2.55 0.00 41.80 3.33
2222 2666 9.807649 GCATATAAGATTTGGTCAAAGTCAAAT 57.192 29.630 2.55 0.00 43.64 2.32
2223 2667 8.801299 TGCATATAAGATTTGGTCAAAGTCAAA 58.199 29.630 2.55 0.00 37.29 2.69
2224 2668 8.347004 TGCATATAAGATTTGGTCAAAGTCAA 57.653 30.769 2.55 0.00 33.32 3.18
2227 2671 7.629222 GCACTGCATATAAGATTTGGTCAAAGT 60.629 37.037 0.00 0.00 33.32 2.66
2228 2672 6.694411 GCACTGCATATAAGATTTGGTCAAAG 59.306 38.462 0.00 0.00 33.32 2.77
2229 2673 6.152492 TGCACTGCATATAAGATTTGGTCAAA 59.848 34.615 0.00 0.00 31.71 2.69
2231 2675 5.066375 GTGCACTGCATATAAGATTTGGTCA 59.934 40.000 10.32 0.00 41.91 4.02
2234 2678 5.503662 TGTGCACTGCATATAAGATTTGG 57.496 39.130 19.41 0.00 41.91 3.28
2236 2680 5.508489 GGCATGTGCACTGCATATAAGATTT 60.508 40.000 29.56 0.00 38.26 2.17
2237 2681 4.022589 GGCATGTGCACTGCATATAAGATT 60.023 41.667 29.56 0.00 38.26 2.40
2238 2682 3.504906 GGCATGTGCACTGCATATAAGAT 59.495 43.478 29.56 8.04 38.26 2.40
2240 2684 2.882761 AGGCATGTGCACTGCATATAAG 59.117 45.455 29.56 3.79 38.26 1.73
2241 2685 2.934887 AGGCATGTGCACTGCATATAA 58.065 42.857 29.56 7.50 38.26 0.98
2242 2686 2.643995 AGGCATGTGCACTGCATATA 57.356 45.000 29.56 8.16 38.26 0.86
2243 2687 2.643995 TAGGCATGTGCACTGCATAT 57.356 45.000 29.56 21.07 40.84 1.78
2244 2688 2.643995 ATAGGCATGTGCACTGCATA 57.356 45.000 29.56 27.82 41.91 3.14
2245 2689 2.643995 TATAGGCATGTGCACTGCAT 57.356 45.000 29.56 26.96 41.91 3.96
2246 2690 2.643995 ATATAGGCATGTGCACTGCA 57.356 45.000 29.56 17.90 44.36 4.41
2249 2693 7.962995 ATAGTACTATATAGGCATGTGCACT 57.037 36.000 19.41 0.00 44.36 4.40
2250 2694 8.035394 ACAATAGTACTATATAGGCATGTGCAC 58.965 37.037 15.74 10.75 44.36 4.57
2254 2852 9.856488 CGAAACAATAGTACTATATAGGCATGT 57.144 33.333 15.74 11.25 0.00 3.21
2265 2863 6.421377 TGTAGCGACGAAACAATAGTACTA 57.579 37.500 4.77 4.77 0.00 1.82
2276 2879 0.390124 ACCCACTTGTAGCGACGAAA 59.610 50.000 0.00 0.00 0.00 3.46
2307 2910 0.249120 TATGGCTGAAGTGACACCGG 59.751 55.000 0.00 0.00 0.00 5.28
2313 2916 2.483013 GCACCGTATATGGCTGAAGTGA 60.483 50.000 11.13 0.00 0.00 3.41
2324 2927 1.361271 CCGACGTGGCACCGTATAT 59.639 57.895 12.86 0.00 41.98 0.86
2335 2938 0.509499 ACGTAAAATGTGCCGACGTG 59.491 50.000 0.00 0.00 44.43 4.49
2337 2940 1.065358 AGACGTAAAATGTGCCGACG 58.935 50.000 0.00 0.00 39.37 5.12
2342 2949 5.287752 TCTCATTCGTAGACGTAAAATGTGC 59.712 40.000 12.09 0.00 40.80 4.57
2344 2951 9.234384 CTAATCTCATTCGTAGACGTAAAATGT 57.766 33.333 12.09 0.75 40.80 2.71
2372 2979 4.095410 CACATGAACGTGCAAATATGGT 57.905 40.909 0.00 0.00 0.00 3.55
2382 2989 2.490328 AAACTTGGCACATGAACGTG 57.510 45.000 0.00 0.00 39.30 4.49
2383 2990 3.880490 TCTAAAACTTGGCACATGAACGT 59.120 39.130 0.00 0.00 39.30 3.99
2384 2991 4.481930 TCTAAAACTTGGCACATGAACG 57.518 40.909 0.00 0.00 39.30 3.95
2385 2992 6.446318 TGATTCTAAAACTTGGCACATGAAC 58.554 36.000 0.00 0.00 39.30 3.18
2386 2993 6.265196 ACTGATTCTAAAACTTGGCACATGAA 59.735 34.615 0.00 0.00 39.30 2.57
2387 2994 5.769662 ACTGATTCTAAAACTTGGCACATGA 59.230 36.000 0.00 0.00 39.30 3.07
2388 2995 6.017400 ACTGATTCTAAAACTTGGCACATG 57.983 37.500 0.00 0.00 39.30 3.21
2389 2996 6.655078 AACTGATTCTAAAACTTGGCACAT 57.345 33.333 0.00 0.00 39.30 3.21
2390 2997 6.096141 TCAAACTGATTCTAAAACTTGGCACA 59.904 34.615 0.00 0.00 0.00 4.57
2406 3013 9.743057 TGAATTTGAAAAATACGTCAAACTGAT 57.257 25.926 0.00 0.00 44.24 2.90
2407 3014 9.574458 TTGAATTTGAAAAATACGTCAAACTGA 57.426 25.926 0.00 0.00 44.24 3.41
2440 3047 9.607285 GTTTGAACTTGTCATAAATATTCACGT 57.393 29.630 0.00 0.00 35.70 4.49
2441 3048 9.605955 TGTTTGAACTTGTCATAAATATTCACG 57.394 29.630 0.00 0.00 35.70 4.35
2450 3057 7.800155 TCAGTGATGTTTGAACTTGTCATAA 57.200 32.000 0.00 0.00 35.70 1.90
2451 3058 7.809665 CATCAGTGATGTTTGAACTTGTCATA 58.190 34.615 22.70 0.00 34.26 2.15
2514 3121 2.067365 AAGGGACCAACCAACAACTC 57.933 50.000 0.00 0.00 41.20 3.01
2546 3155 0.529119 CCGTACATTACAGGGCCGAC 60.529 60.000 0.00 0.00 0.00 4.79
2615 3227 5.099042 AGTGATCCCGCTTATTAACAACT 57.901 39.130 0.00 0.00 0.00 3.16
2616 3228 6.018994 CACTAGTGATCCCGCTTATTAACAAC 60.019 42.308 18.45 0.00 34.50 3.32
2618 3230 5.597806 CACTAGTGATCCCGCTTATTAACA 58.402 41.667 18.45 0.00 34.50 2.41
2624 3236 1.409064 CTGCACTAGTGATCCCGCTTA 59.591 52.381 27.08 0.00 34.50 3.09
2626 3238 0.684479 TCTGCACTAGTGATCCCGCT 60.684 55.000 27.08 0.00 36.94 5.52
2628 3240 2.477825 CATTCTGCACTAGTGATCCCG 58.522 52.381 27.08 8.72 0.00 5.14
2638 3250 9.872362 AGTTTCAAACTGTTTGCATTCTGCACT 62.872 37.037 24.62 12.47 46.79 4.40
2639 3251 7.824587 AGTTTCAAACTGTTTGCATTCTGCAC 61.825 38.462 24.62 10.66 46.79 4.57
2645 3257 7.148423 GGAAAGAAGTTTCAAACTGTTTGCATT 60.148 33.333 24.62 16.38 43.52 3.56
2653 3265 5.954335 ACTGTGGAAAGAAGTTTCAAACTG 58.046 37.500 2.78 4.89 43.52 3.16
2659 3271 6.310467 GGTTCAAAACTGTGGAAAGAAGTTTC 59.690 38.462 0.92 0.00 41.93 2.78
2663 3275 4.351192 CGGTTCAAAACTGTGGAAAGAAG 58.649 43.478 0.00 0.00 33.03 2.85
2665 3277 2.098443 GCGGTTCAAAACTGTGGAAAGA 59.902 45.455 1.02 0.00 39.98 2.52
2669 3281 2.018544 CGCGGTTCAAAACTGTGGA 58.981 52.632 0.00 0.00 42.98 4.02
2671 3283 0.316689 GACCGCGGTTCAAAACTGTG 60.317 55.000 34.65 0.00 45.56 3.66
2672 3284 0.463116 AGACCGCGGTTCAAAACTGT 60.463 50.000 34.65 4.34 39.98 3.55
2673 3285 0.661020 AAGACCGCGGTTCAAAACTG 59.339 50.000 34.65 0.23 40.80 3.16
2680 3297 1.155424 TTCACACAAGACCGCGGTTC 61.155 55.000 34.65 24.25 0.00 3.62
2687 3304 1.670811 CACACACCTTCACACAAGACC 59.329 52.381 0.00 0.00 0.00 3.85
2693 3310 2.615493 CCCCTATCACACACCTTCACAC 60.615 54.545 0.00 0.00 0.00 3.82
2706 3323 4.105217 TCTTGTACGGTAGATCCCCTATCA 59.895 45.833 0.00 0.00 37.03 2.15
2715 3332 8.937207 ATTAATCTAGGTCTTGTACGGTAGAT 57.063 34.615 0.00 0.00 36.95 1.98
2716 3333 7.172190 CGATTAATCTAGGTCTTGTACGGTAGA 59.828 40.741 13.45 0.00 32.05 2.59
2718 3335 6.767902 ACGATTAATCTAGGTCTTGTACGGTA 59.232 38.462 13.45 0.00 0.00 4.02
2723 3340 6.512903 CGCAGACGATTAATCTAGGTCTTGTA 60.513 42.308 17.05 0.00 43.93 2.41
2760 3377 6.255215 CACTTTAGTGTTTTCGTGTGTGATT 58.745 36.000 1.69 0.00 40.96 2.57
2762 3379 5.211266 CACTTTAGTGTTTTCGTGTGTGA 57.789 39.130 1.69 0.00 40.96 3.58
2773 3390 2.095213 CACACACGTGCACTTTAGTGTT 59.905 45.455 21.03 12.41 44.32 3.32
2813 3430 2.009774 GCACATCTCATACGGCTTGTT 58.990 47.619 0.00 0.00 0.00 2.83
2820 3437 3.990469 GGATGGTTAGCACATCTCATACG 59.010 47.826 5.52 0.00 43.25 3.06
2829 3446 1.357137 TCTGTGGGATGGTTAGCACA 58.643 50.000 0.00 0.00 0.00 4.57
2830 3447 2.489938 TTCTGTGGGATGGTTAGCAC 57.510 50.000 0.00 0.00 0.00 4.40
2837 3454 4.142093 CCTTAAGCAAATTCTGTGGGATGG 60.142 45.833 0.00 0.00 0.00 3.51
2847 3464 7.638134 TGCAAACATTTTCCTTAAGCAAATTC 58.362 30.769 0.00 0.00 0.00 2.17
2859 3476 3.122780 GCGTACCAATGCAAACATTTTCC 59.877 43.478 0.00 0.00 44.21 3.13
2860 3477 3.987220 AGCGTACCAATGCAAACATTTTC 59.013 39.130 0.00 0.00 44.21 2.29
2875 3492 4.329489 CGTCGTGTATGATATAGCGTACC 58.671 47.826 15.85 7.91 30.88 3.34
2879 3496 1.832402 CGCGTCGTGTATGATATAGCG 59.168 52.381 0.00 0.00 39.14 4.26
2881 3498 2.174764 GCCGCGTCGTGTATGATATAG 58.825 52.381 4.92 0.00 0.00 1.31
2890 3507 1.594836 TTTTTAGGCCGCGTCGTGT 60.595 52.632 4.92 0.00 0.00 4.49
2909 3526 1.001406 GATAGCCCTATCGCACAAGCT 59.999 52.381 0.00 0.00 39.10 3.74
2910 3527 1.433534 GATAGCCCTATCGCACAAGC 58.566 55.000 0.00 0.00 33.46 4.01
2928 3545 2.488204 TGAAAAGCGTGGATGATGGA 57.512 45.000 0.00 0.00 0.00 3.41
2930 3547 3.899734 TGTTTGAAAAGCGTGGATGATG 58.100 40.909 0.00 0.00 0.00 3.07
2935 3552 2.856720 GCGAATGTTTGAAAAGCGTGGA 60.857 45.455 0.00 0.00 0.00 4.02
2938 3563 1.394697 CGCGAATGTTTGAAAAGCGT 58.605 45.000 0.00 0.00 41.04 5.07
2951 3576 0.819259 ATATGTTGCCAGCCGCGAAT 60.819 50.000 8.23 0.00 42.08 3.34
2952 3577 1.436195 GATATGTTGCCAGCCGCGAA 61.436 55.000 8.23 0.00 42.08 4.70
2954 3579 2.633657 GATATGTTGCCAGCCGCG 59.366 61.111 0.00 0.00 42.08 6.46
2982 3607 4.348461 TGATGTCGTCCTAGTCTCCTAGAT 59.652 45.833 0.00 0.00 42.90 1.98
3000 3625 2.684881 GGGATTTTGCAGATCGTGATGT 59.315 45.455 6.19 0.00 0.00 3.06
3014 3639 1.575788 GAGGGGAATCTGGGGGATTTT 59.424 52.381 0.00 0.00 43.90 1.82
3021 3646 2.387160 TCTATAGGGAGGGGAATCTGGG 59.613 54.545 0.00 0.00 0.00 4.45
3067 3692 2.885266 CCGTCCAGATATCTCTCGGAAA 59.115 50.000 23.86 1.03 38.96 3.13
3069 3694 1.420514 ACCGTCCAGATATCTCTCGGA 59.579 52.381 29.84 20.33 39.74 4.55
3082 3707 5.471556 TTAACTTTACATCTCACCGTCCA 57.528 39.130 0.00 0.00 0.00 4.02
3087 3712 6.592607 TCCGTTGATTAACTTTACATCTCACC 59.407 38.462 0.00 0.00 34.60 4.02
3120 3745 6.100004 GTCTGAATTCTCTATCGTTTCACCA 58.900 40.000 7.05 0.00 0.00 4.17
3121 3746 6.100004 TGTCTGAATTCTCTATCGTTTCACC 58.900 40.000 7.05 0.00 0.00 4.02
3122 3747 7.763172 ATGTCTGAATTCTCTATCGTTTCAC 57.237 36.000 7.05 0.00 0.00 3.18
3123 3748 8.777865 AAATGTCTGAATTCTCTATCGTTTCA 57.222 30.769 7.05 0.00 0.00 2.69
3125 3750 8.777865 TGAAATGTCTGAATTCTCTATCGTTT 57.222 30.769 7.05 6.76 0.00 3.60
3126 3751 8.824781 CATGAAATGTCTGAATTCTCTATCGTT 58.175 33.333 7.05 0.00 40.20 3.85
3145 3774 4.693566 TCTCGAAACCGCTTTACATGAAAT 59.306 37.500 0.00 0.00 0.00 2.17
3146 3775 4.059511 TCTCGAAACCGCTTTACATGAAA 58.940 39.130 0.00 0.00 0.00 2.69
3147 3776 3.655486 TCTCGAAACCGCTTTACATGAA 58.345 40.909 0.00 0.00 0.00 2.57
3148 3777 3.057104 TCTCTCGAAACCGCTTTACATGA 60.057 43.478 0.00 0.00 0.00 3.07
3149 3778 3.250744 TCTCTCGAAACCGCTTTACATG 58.749 45.455 0.00 0.00 0.00 3.21
3150 3779 3.587797 TCTCTCGAAACCGCTTTACAT 57.412 42.857 0.00 0.00 0.00 2.29
3151 3780 3.587797 ATCTCTCGAAACCGCTTTACA 57.412 42.857 0.00 0.00 0.00 2.41
3152 3781 5.399892 CAGATATCTCTCGAAACCGCTTTAC 59.600 44.000 1.03 0.00 0.00 2.01
3153 3782 5.507482 CCAGATATCTCTCGAAACCGCTTTA 60.507 44.000 1.03 0.00 0.00 1.85
3154 3783 4.363999 CAGATATCTCTCGAAACCGCTTT 58.636 43.478 1.03 0.00 0.00 3.51
3155 3784 3.243569 CCAGATATCTCTCGAAACCGCTT 60.244 47.826 1.03 0.00 0.00 4.68
3156 3785 2.294791 CCAGATATCTCTCGAAACCGCT 59.705 50.000 1.03 0.00 0.00 5.52
3157 3786 2.293677 TCCAGATATCTCTCGAAACCGC 59.706 50.000 1.03 0.00 0.00 5.68
3158 3787 3.566322 AGTCCAGATATCTCTCGAAACCG 59.434 47.826 1.03 0.00 0.00 4.44
3159 3788 4.339814 ACAGTCCAGATATCTCTCGAAACC 59.660 45.833 1.03 0.00 0.00 3.27
3160 3789 5.066634 TCACAGTCCAGATATCTCTCGAAAC 59.933 44.000 1.03 0.00 0.00 2.78
3161 3790 5.193679 TCACAGTCCAGATATCTCTCGAAA 58.806 41.667 1.03 0.00 0.00 3.46
3162 3791 4.781934 TCACAGTCCAGATATCTCTCGAA 58.218 43.478 1.03 0.00 0.00 3.71
3163 3792 4.101741 TCTCACAGTCCAGATATCTCTCGA 59.898 45.833 1.03 0.00 0.00 4.04
3164 3793 4.384940 TCTCACAGTCCAGATATCTCTCG 58.615 47.826 1.03 0.00 0.00 4.04
3165 3794 5.335897 GCATCTCACAGTCCAGATATCTCTC 60.336 48.000 1.03 0.00 0.00 3.20
3166 3795 4.523943 GCATCTCACAGTCCAGATATCTCT 59.476 45.833 1.03 0.00 0.00 3.10
3167 3796 4.280425 TGCATCTCACAGTCCAGATATCTC 59.720 45.833 1.03 0.00 0.00 2.75
3168 3797 4.221530 TGCATCTCACAGTCCAGATATCT 58.778 43.478 0.00 0.00 0.00 1.98
3169 3798 4.597404 TGCATCTCACAGTCCAGATATC 57.403 45.455 0.00 0.00 0.00 1.63
3170 3799 5.163227 ACATTGCATCTCACAGTCCAGATAT 60.163 40.000 0.00 0.00 0.00 1.63
3171 3800 4.162888 ACATTGCATCTCACAGTCCAGATA 59.837 41.667 0.00 0.00 0.00 1.98
3172 3801 3.054582 ACATTGCATCTCACAGTCCAGAT 60.055 43.478 0.00 0.00 0.00 2.90
3173 3802 2.303890 ACATTGCATCTCACAGTCCAGA 59.696 45.455 0.00 0.00 0.00 3.86
3174 3803 2.708051 ACATTGCATCTCACAGTCCAG 58.292 47.619 0.00 0.00 0.00 3.86
3175 3804 2.865119 ACATTGCATCTCACAGTCCA 57.135 45.000 0.00 0.00 0.00 4.02
3176 3805 5.355071 TGATTAACATTGCATCTCACAGTCC 59.645 40.000 0.00 0.00 0.00 3.85
3177 3806 6.426980 TGATTAACATTGCATCTCACAGTC 57.573 37.500 0.00 0.00 0.00 3.51
3178 3807 6.615088 GTTGATTAACATTGCATCTCACAGT 58.385 36.000 0.00 0.00 36.78 3.55
3179 3808 5.735892 CGTTGATTAACATTGCATCTCACAG 59.264 40.000 0.95 0.00 36.58 3.66
3180 3809 5.391843 CCGTTGATTAACATTGCATCTCACA 60.392 40.000 0.95 0.00 36.58 3.58
3181 3810 5.030295 CCGTTGATTAACATTGCATCTCAC 58.970 41.667 0.95 0.00 36.58 3.51
3182 3811 4.940654 TCCGTTGATTAACATTGCATCTCA 59.059 37.500 0.95 0.00 36.58 3.27
3183 3812 5.484173 TCCGTTGATTAACATTGCATCTC 57.516 39.130 0.95 0.00 36.58 2.75
3184 3813 5.895636 TTCCGTTGATTAACATTGCATCT 57.104 34.783 0.95 0.00 36.58 2.90
3185 3814 6.942886 TTTTCCGTTGATTAACATTGCATC 57.057 33.333 0.95 0.00 36.58 3.91
3186 3815 6.703607 TGTTTTTCCGTTGATTAACATTGCAT 59.296 30.769 0.95 0.00 36.58 3.96
3187 3816 6.019479 GTGTTTTTCCGTTGATTAACATTGCA 60.019 34.615 0.95 0.00 36.58 4.08
3188 3817 6.200097 AGTGTTTTTCCGTTGATTAACATTGC 59.800 34.615 0.95 0.00 36.58 3.56
3189 3818 7.433719 TCAGTGTTTTTCCGTTGATTAACATTG 59.566 33.333 0.95 0.00 35.52 2.82
3190 3819 7.484975 TCAGTGTTTTTCCGTTGATTAACATT 58.515 30.769 0.95 0.00 36.58 2.71
3191 3820 7.033530 TCAGTGTTTTTCCGTTGATTAACAT 57.966 32.000 0.95 0.00 36.58 2.71
3192 3821 6.438259 TCAGTGTTTTTCCGTTGATTAACA 57.562 33.333 0.95 0.00 36.58 2.41
3193 3822 5.912955 CCTCAGTGTTTTTCCGTTGATTAAC 59.087 40.000 0.00 0.00 0.00 2.01
3194 3823 5.823570 TCCTCAGTGTTTTTCCGTTGATTAA 59.176 36.000 0.00 0.00 0.00 1.40
3195 3824 5.369833 TCCTCAGTGTTTTTCCGTTGATTA 58.630 37.500 0.00 0.00 0.00 1.75
3196 3825 4.204012 TCCTCAGTGTTTTTCCGTTGATT 58.796 39.130 0.00 0.00 0.00 2.57
3197 3826 3.815809 TCCTCAGTGTTTTTCCGTTGAT 58.184 40.909 0.00 0.00 0.00 2.57
3198 3827 3.269538 TCCTCAGTGTTTTTCCGTTGA 57.730 42.857 0.00 0.00 0.00 3.18
3199 3828 4.568152 AATCCTCAGTGTTTTTCCGTTG 57.432 40.909 0.00 0.00 0.00 4.10
3200 3829 5.126384 TCAAAATCCTCAGTGTTTTTCCGTT 59.874 36.000 0.00 0.00 0.00 4.44
3201 3830 4.642885 TCAAAATCCTCAGTGTTTTTCCGT 59.357 37.500 0.00 0.00 0.00 4.69
3202 3831 5.181690 TCAAAATCCTCAGTGTTTTTCCG 57.818 39.130 0.00 0.00 0.00 4.30
3203 3832 9.710900 ATTTATCAAAATCCTCAGTGTTTTTCC 57.289 29.630 0.00 0.00 28.88 3.13
3222 3851 8.192774 GCCTCATGTCAGAAAATCAATTTATCA 58.807 33.333 0.00 0.00 0.00 2.15
3223 3852 8.192774 TGCCTCATGTCAGAAAATCAATTTATC 58.807 33.333 0.00 0.00 0.00 1.75
3224 3853 8.070034 TGCCTCATGTCAGAAAATCAATTTAT 57.930 30.769 0.00 0.00 0.00 1.40
3225 3854 7.465353 TGCCTCATGTCAGAAAATCAATTTA 57.535 32.000 0.00 0.00 0.00 1.40
3226 3855 6.349243 TGCCTCATGTCAGAAAATCAATTT 57.651 33.333 0.00 0.00 0.00 1.82
3227 3856 5.988310 TGCCTCATGTCAGAAAATCAATT 57.012 34.783 0.00 0.00 0.00 2.32
3228 3857 6.338146 CAATGCCTCATGTCAGAAAATCAAT 58.662 36.000 0.00 0.00 0.00 2.57
3229 3858 5.716094 CAATGCCTCATGTCAGAAAATCAA 58.284 37.500 0.00 0.00 0.00 2.57
3230 3859 4.381185 GCAATGCCTCATGTCAGAAAATCA 60.381 41.667 0.00 0.00 0.00 2.57
3231 3860 4.110482 GCAATGCCTCATGTCAGAAAATC 58.890 43.478 0.00 0.00 0.00 2.17
3232 3861 3.118884 GGCAATGCCTCATGTCAGAAAAT 60.119 43.478 18.47 0.00 46.69 1.82
3233 3862 2.231964 GGCAATGCCTCATGTCAGAAAA 59.768 45.455 18.47 0.00 46.69 2.29
3234 3863 1.820519 GGCAATGCCTCATGTCAGAAA 59.179 47.619 18.47 0.00 46.69 2.52
3235 3864 1.466856 GGCAATGCCTCATGTCAGAA 58.533 50.000 18.47 0.00 46.69 3.02
3236 3865 3.179925 GGCAATGCCTCATGTCAGA 57.820 52.632 18.47 0.00 46.69 3.27
3247 3876 3.641437 TTATATTTCGCAGGGCAATGC 57.359 42.857 0.00 0.00 42.95 3.56
3248 3877 4.298332 GGTTTATATTTCGCAGGGCAATG 58.702 43.478 0.00 0.00 0.00 2.82
3249 3878 3.004315 CGGTTTATATTTCGCAGGGCAAT 59.996 43.478 0.00 0.00 0.00 3.56
3250 3879 2.356382 CGGTTTATATTTCGCAGGGCAA 59.644 45.455 0.00 0.00 0.00 4.52
3251 3880 1.944024 CGGTTTATATTTCGCAGGGCA 59.056 47.619 0.00 0.00 0.00 5.36
3252 3881 1.334689 GCGGTTTATATTTCGCAGGGC 60.335 52.381 0.00 0.00 46.33 5.19
3253 3882 2.681152 GCGGTTTATATTTCGCAGGG 57.319 50.000 0.00 0.00 46.33 4.45
3257 3886 1.593933 TCACGGCGGTTTATATTTCGC 59.406 47.619 13.24 0.00 46.35 4.70
3258 3887 3.363575 CCATCACGGCGGTTTATATTTCG 60.364 47.826 13.24 0.00 0.00 3.46
3259 3888 4.141855 CCATCACGGCGGTTTATATTTC 57.858 45.455 13.24 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.