>input_sequence_53477
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------ATGGCGGCCAAGGAGGTGGAGAAGGTGGTCACCGCCGACGAAGAGACAAC---GGACATCGTCGTCCATAGGGT
GCCGTACGGGGACCCGCCGGCGGTCCGGGCGCTGGACACGAGCGAGCTGACCACGTGGTCCCTGTACCGCGCCCTCATCG
GCGAGTTCACGGCCTCCCTCGTCCTCCTCTACGTGAGCATCGCCACCGTCATCGGGTACAGGAGCCAGTCCTCCGCCCC-
--CGATGACCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCTTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACTC
CACTAGCGGCATCTCAGGTAGATAT------ATACACATCTCTATC-ACAACATACAATATTTTCTCCGTCCGTAATTAC
TTGTCGTAGAAATGGATAGAAATGGGTGTGTATCTAGAACCAATGGTCGCCTTGCGT----G----TGCAA----TGCAG
GCGGGCACATAAACCCGGCGGTGACGTTCGCGCTCTTCATGGCCGGGAAGGTGACGCTGGTGCGCTCGGTGCTGTACGTG
GCGGCGCAGTGCCTCGGCGCCGTCGTCGGCGTGGGCATCGTCAAGGGGATCATGAAGCACCCCTACGACGACCTGGGGGG
CGGCGCCAACGCGGTGGCCGGGGGGTACTCGCTCGGGGCGGCCCTTGGCGCCGAGACCTTGGGCACCTTCGTCCTCGCCT
ACGCCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTAC----CAGACG--CCT-----
-TCTCCTCTCACTCTC------------AGCTAGCTAGCTCGTGGTGATCGCCGCCGGACCTGTACA---------TATA
TG--------------ATGATTTGTCGTCAATTAAT----TGCAGCTGGTGGCGGCGCTCCCGATCGGCATGGCGGTGTT
CGTGGTGCACCTGGCGACCATCCCGATCACCGGCACGGGCATCAACCCGGCGAGGAGCCTGGGTGCCGCCGTCCTGTACA
ACCAGCACAAAACCTGGAAGCAACACGTACGTG-GTGGGACCCATGCACTGCACTACTACTCCGTCTGTTTCTTTTTAGT
TTGCATATAAAATTTGGTCAAAGTCAAATTTTATAAAATTTGACTAACTTTATAAGAGAAAAGATCAACAATCACAATAT
GAAATCAATATTGTTAGATGCATCATGGAATGAATTTTCATACCATACAGCGTTAGTATCATAGATGTTGGTATTTTTTA
TATAAATTTAGTTAAACTTTGTGTAATTTGACTTTGACCAAATCTTATATGCAG--------------------------
--------------------------------------------------------------------------------
-------------------------------------------TGC-----ACATGCCTATATA-----GTACTATTGTT
TCGTCGCTACAAGTGGGTCCCATGCCATGCCGGTGTCACTTCAGCCATATACGGTGCCAC----GTCGGCACATTTTACG
TCTACGAATGA---------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr4B_1_TraesCS4B01G027600
AGAATGCTCTGCTTTCCTTTTGCTGCTGAGGTCGGCAGTCCATATGGGCTTAGATTTTAGGCTCGCGCATTTCTTTTCGA
AGCTTTAGCCGAACTTTTCTTCGTTGTACCACCATAGCTTCACTTGCAATGGAAAACATAGAGAATTTTTTTGTGTGTGT
GGGCTAAACATAGAGAAATTCAACCACTAAAGT--------------------ACCTACAAGACATGTAGAAGACCAAAC
CTCATTTAACCCGCGCAATAGTAGGCCACCACGTACGACAGAGATTGGCAAATATACCAAGCATATCGACAGGGGCATCA
CAAAGATTGGCAAATATACCACGCAAGATGTCAGTCAATATCGTGAGGCCAAGCCGATGATCTTGCTCACAAAGTCTCAG
AAGAAGAGGTTGTTGAACAAGACGATGATTTCCCCAACGATGCGCATCGAGAAACACCGATGGAC---------------
--------------ACAACATCGACCGCCACCGCCACCGCCACCGCCACTGCCTAGCACACCGGGGGTA-CGGGGTGGCC
TGATCCGGGGAAGAAACAGGTACGTAGCGGCACAAGATCTGGCAGTAGTGTCTAGGA---TCAGGGAGAAGGTGTGAGAT
CCAAAATTGGGGACCAGGT-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ACC
ATTGGACACTGGACAATGGATGAAGATCCGGTCGACATA----ATTGGTAACCGGAAGAGCAATGCCA-ACCTACGTAAG
AAATGTTACGTGATTAACGTAAAAGCTTAGT---------------------------AACAGTTTCGTAGGTGTAGGGT
TACTGTT-GTTATATTCCACCTCAGCCCTTACGTTAATCACCTGTCGAGTAGAAGCTCTTGGACATGTAGGAGTAGATTC
CAAGGAGAAAACCTCCTCCAACTCCAAGTATCTAATCCAAGCAGAGTCTCCTTCACGCATGCA----GCTTCGCAAG--C
ACTTGACCACGATCATCCCTATTTAAGCTTGCACTCTTGGAGTGGATACTCCTATCACCAGACTGCCATTGCCATACACA
CACAGCT---------GGTTCCAACCAAGCCGACCGACC-----------------------------------------
------ATGGCGGCCAAGGAGGTGGAGAAGGTGGTCACCGCCGACGAAGAGACAAC---GGACATCGTCGTCCATAGGGT
GCCGTACGGGGACCCGCCGGCGGTCCGGGCGCTGGACACGAGCGAGCTGACCACGTGGTCCCTGTACCGCGCCCTCATCG
GCGAGTTCACGGCCTCCCTCGTCCTCCTCTACGTGAGCATCGCCACCGTCATCGGGTACAGGAGCCAGTCCTCCGCCCC-
--CGATGACCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCTTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACTC
CACTAGCGGCATCTCAGGTAGATAT------ATACACATCTCTATC-ACAACATACAATATTTTCTCCGTCCGTAATTAC
TTGTCGTAGAAATGGATAGAAATGGGTGTGTATCTAGAACCAATGGTCGCCTTGCGT----G----TGCAA----TGCAG
GCGGGCACATAAACCCGGCGGTGACGTTCGCGCTCTTCATGGCCGGGAAGGTGACGCTGGTGCGCTCGGTGCTGTACGTG
GCGGCGCAGTGCCTCGGCGCCGTCGTCGGCGTGGGCATCGTCAAGGGGATCATGAAGCACCCCTACGACGACCTGGGGGG
CGGCGCCAACGCGGTGGCCGGGGGGTACTCGCTCGGGGCGGCCCTTGGCGCCGAGACCTTGGGCACCTTCGTCCTCGCCT
ACGCCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTAC----CAGACG--CCT-----
-TCTCCTCTCACTCTC------------AGCTAGCTAGCTCGTGGTGATCGCCGCCGGACCTGTACA---------TATA
TG--------------ATGATTTGTCGTCAATTAAT----TGCAGCTGGTGGCGGCGCTCCCGATCGGCATGGCGGTGTT
CGTGGTGCACCTGGCGACCATCCCGATCACCGGCACGGGCATCAACCCGGCGAGGAGCCTGGGTGCCGCCGTCCTGTACA
ACCAGCACAAAACCTGGAAGCAACACGTACGTG-GTGGGACCCATGCACTGCACTACTACTCCGTCTGTTTCTTTTTAGT
TTGCATATAAAATTTGGTCAAAGTCAAATTTTATAAAATTTGACTAACTTTATAAGAGAAAAGATCAACAATCACAATAT
GAAATCAATATTGTTAGATGCATCATGGAATGAATTTTCATACCATACAGCGTTAGTATCATAGATGTTGGTATTTTTTA
TATAAATTTAGTTAAACTTTGTGTAATTTGACTTTGACCAAATCTTATATGCAG--------------------------
--------------------------------------------------------------------------------
-------------------------------------------TGC-----ACATGCCTATATA-----GTACTATTGTT
TCGTCGCTACAAGTGGGTCCCATGCCATGCCGGTGTCACTTCAGCCATATACGGTGCCAC----GTCGGCACATTTTACG
TCTACGAATGAGATTAGCACCATATTTGCACGTTCATGTGCCAAGTTTTAGAATCAGTTTGACGTATTTTTCAAATTCAA
ATACTAACGTGAATATTTATGACAAGTTCAAACATCACTGATGTATTTACCTTTTTTTCATCCGTATAATGAGAATAAAA
GAGTTGTTGGTTGGTCCCTTTTTAC--TACCTCTGTCGGCCCTGTAATGTACGGAATCTTGCTA-TAGTACCGTTGGTTA
AT--TAAGCGTGTCTTGATGTGTGTTAGTTGTTAATAAGCGGGATCACTAGTGCAGAATGCAAACAGTTTGAAACTTCTT
TCCAC-----AGTTTTGAACCGCGGTCTTGTGTGAAGGTGTGTGATAGGGGATCTACCGTACAAGACCTAGATTAATCGT
CTGCGATTGCTCCTCAAATCACACACGAAAACACTAAAGTGCACGTGTGTGATCGGGAGAGCTATCCGGAACAAGCCGTA
TGAGATGTGCTAACCATCCCACAGAATTTGCTTAAGGAAAATGTTTGCATTGGTACGCTATATCATACACGACGCGGCCT
AAAAAAGCTTGTGCGATAGGGCTATCCATCAT--------CCACGCTTTTCAAACATTCGCGGCTGGCAACATATCGCAA
ACAGTTATCTAGGAGACTAGGACGACATCACGATCTGCAAAATCCCCCAGATTCCCCTCCCTATAGATTTTTTTAGCGTG
TAACAAGGGCATTTCCGAGAGATATCTGGACGGTGAGATGTAAAGTTAATCAACGGAGAAAAAATGGTGAAACGATA---
-GAGAATTCAGACATTTCATGTAAAGCGGTTTCGAGAGATATCTGGACTGTGAGATGCAATGTTAATCAACGGAAAAACA
CTGAGGATTTTGATAAATTGATTTTCTGACATGAGGCATTGCCCTGCGAAATATAAACCGCCGTGATGGCACTTTTTTAG
AATAAAATGCATTTAAAAATCATCATCATACTATATTTTATAATTCTAATTTCCAAACTAGTCACAATATTTT
>chr1D_71
----------------------------------------------------------------------TTCTTTCCGA
AGCTTTAGCCGAACTCGTCTTCGTTGTGCCACCATAGCTTCACTTGCAATGGA---------------------------
-----AAACATAGAGAAATTCAACCACTAAAGT--------------------ACC--------------------AAAC
CTCATTTAACCCACGCAATAGTAGGCCACCACGTACGACAGAGATTGGCAAACATGCCAAGCGGAACGACAGGGGCATCA
CCCTGACATAG-----------GCAAGCAGTTAGTCAATATCATGAGACCAAGCCGATGATCTTGCTCACAAAGTCTCGG
AAGAAGAAGTTGTTGATCAAGACGATGATTTCCCCAACGATGCCCATCGAGCAACACCAACGAACAACAAAAGAAACAAC
ATGCCTTCATGAGAACAACATCGACCGCCACTGCCACCGCC------------TAGCACACCGGGGGTA-CGGGGTGGCT
TGATCTAGGGAAGAAACAGGTATATGGCGATGCAAGATCTGGGAATAGTGTCTAGGA---TAGGGGAGAAGCCGTGAGAT
CCAAAATTGAGGACCATGTATTTAGGGATCAG-------TTAAGAATAAGAAAAGAGAAATTGTTAAAAGGGAGAGAGAG
GATTGGTGATATAGCTCGTTATATTGCTTGAGCTTCGTGGGCACATATATAGGAGTACATGATCTACTTGGAGTACAAGG
CAAGCCAGAATATTTCCTAGTCTAACCTATGTTTTCAATCTAATCAATATACTCAACAGAAAT-AATGGGGCGATGCACC
ATTGGACATTGGACAATGGATGAAGATCCGCTCGACATA----ATTGGTAACTGGAAGAGCAATGCTACACCTACGTAAG
AAATGTTATGTGATTAATGTAAAAGCTTAGT---------------------------ACCAGCTTGGTAGGTTTAGGGT
TATTGTT-GTTACATTCCACCTCAGCCGTTACGTTAATCACCTGTGCAGTAGAAGCTCTTGGACATGT---AGTAGATTC
CAAGGAGAAAACCTCCTCCAACTCCAAATATCTAATCCAAGCAGAGTCTCCCTCACGCATGCA----GCTTTGCAAGCA-
-ATTGACCACGATCATACCTATTTAAGCTTGCACTCTTGGTGTGGATACTCCTATCACCAGACTGCCATTGCCATACACA
CAC--------------GTTCCAACCAAGCCGGC--------------------------------TGACCATGTCGACG
ACGATCATAGCAGCCAAGGAGGTGGAGAAGGTGGTCACCGCCGACGAAGAGATAAC---AGATATCATCGTCCAGAGGGT
GCCGTACTCGGACCCACCGGCGATCCGGACTCTGGACACGAGCGAGCTGACCACGTGGTCCCTGTACTGCGCCCTCATCG
GCGAGTTCACGGCCTCTCTCGTCCTCCTCTACGTGGAA---GCCACCGTCGTCGGGTACAGGAACCAGTCCTCCGCCGC-
--CGATGAGCGATGCACCGGCGTCAGCTACCTCGGCGTCGCCTGCTCCTTCGGTGCCACCGTCTCCGTCCTCGTCTACTC
TACCAGCGGCGTCTCAGATAGGTAT------ATACACATCTGTGTC-ACAACATAC-----TTTTTTCATCCATAATTAC
TTGTCACAGAAATAAATAGAAATGAGT--GTATCTTGAACTAATTGTCGCCTTCCGT----G----TGCAA----TGCAG
GTGGGCACATAAACCCGGCAGTGACGTTCGCGCTCTTCATGGCTGGGAAGGTGACGCTGGTGCGCTCGGT----------
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-------------------------------------------------------------------------
>chr1B_71
----------------------------------------------------------------------TTCTTCCCCA
AGCTTTAGCCAAACTCGACTTCGTTGTGCCACCATAGCTTCACTTGCAATGGA---------------------------
-----AAACATAGAGAAATTTAACCACTAAAGTACCTACAAGACATGTAGAAGACC--------------------AAAC
CTCATTTAACCCACGCAATAGTAGGCCACCACG-ACGACAGAGATTGGCAAACATGCCGAGCGTATCGACAGGGGTATCA
CCCTGACATAG-----------GCAAGCAGTCAGTGAATATCATGAGACCAAGCCGATGATCTTGCTCACAAAGTCTCAG
AAGAAGAGATTGTTGATCAAGACGATGATTTTCCCAACGATGCC-ATCGAGCAACACCAACGGACAACAAAAGAAACAAC
ATGCCTTCATGAGAACAACATCGACCGCCACCGCGACTGCC------------TAGCACACCGGGGGTG-CGGTTTGGCT
TGATCCGGGGGAGAAACAGGTATATGGCGGCGCAAGATTTGGGAATAGTGTCTAGGA---TCAGGGAGAAGCTGTGAGAT
CCAAAATTGGGGACGAGGCATTTAGGGATCCA-------TTAAGAATAAGCAAAGAG-----------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AAAT-AATGGGGCGATGCACC
ATTGGACATTGGACAATGGAGGAAGATCCGCTCGACATA----ATTGGTAACAGGAAGAGCAATGCTACACCTATGTAAG
AAATGCTATGTGATTAACGTAAAAGCTTAGT---------------------------AACAGCTTCGTACGGGTAGGG-
--TTGTT-GTTACATTCCACCTTAGCCGT---------------------AGAAGCTCTTGGACATGT---AGTAGATTC
CAAGGAGAAAACCTCCTCCAACTCCAAGTATCTAATCCAAGCAGAGTCTCCCTCACGCATGCA----GCTTTGCAAGCAC
ACTTGACCACGATCATACCTATTTAAGCTTGCACTCTTGGTGTGGATACTCCTATTACCAGACTGCCATTGCCATACACA
CAC--------------GTTCCAACCAAGCGGCC--------------------------------TGACCATGTCGACG
ACGATCATAGCGGCCAAGGAGGTGGAGAAGGTGATCACCGCCGATGTAGAGATAAC---AGAAATCATCGTCCAGAGGGT
GCCATACTCGGACCTGCTGGCAGTCCGGGCACTGGACA-------------------------GTACCGCGCCCTCATCG
GCGAGTTCACGGCCTCTCTCATCCTCCTCTACGTGAGCATCACCACCGTCGTCAGGTACAGGAACCAGTCCTCCGCCAC-
--CGA---GCGGTGCACCGGCGTCAGCTACCTAGGCGTCGCCTGGTCCTTCGGTGCCACCGTCTCCGTCCTCATTTACTC
TACCAGCGGCGTCTCAGGTAGGTAT------ATACACATCTGTGTC-ATAACATAC-----TTTCTTCATCCATAATTAC
TTGTCACAGAAATGAATAGAAATAAGT--GTATCTTGAACTAATTGTCGCCTTCCGT----G----TGCAA----TGCAG
GTGGGCACATAAAACCGGCAGTGACGTTCCGGCTCTTCATGGCCGGGAAGGTGACGCTGGTGCGCTCGGT----------
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-------------------------------------------------------------------------
>chr4A_98
--------------------------------------------------------------------------------
-----------------TCTTCGTTGTGCCACCATGGCTTCACTTGCAATGGA---------------------------
-----AAACATAGAGAAACTCAACCACTAAAGTACCTACAAGACATTTAGAAGACC--------------------AGAC
CTCATTTAACCCGCGCAATAGTAGGCCACCACGTGCCACAAAGATTGGCAAAAAT----------------GGGGCATCA
CCCTGGTATAG-----------GCAAGTGGTCGGTCAGTATCGTGAGACCAAGCCGATGATCTTGCTCACAAAGTCTCAG
AAGAAGAGGCTGTTGAACAAGACGATGGTTTCCCCAACGATGCACATCGAGCAACACCGACGGACAACAAAAGAAACAAC
ATGCCTTCATGAGAAGAACATCGGCCGCCACCGCCACCTCC------------TAGCACACCGGGGGTTGCGGGGCGGGC
TGATCCGGGGGAGAAACACGTACGTAGCGGCGCAAGATCTGGGAGTAGTGTCCAGGAGGATCCGGGAGAAGATTTGAGAT
CCAAAATTGGGGACCAGGTATTTATGGATCCGTTAAGACTTAAGAATAAGCAAAGAT-----------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------AAATTAATGGGGCGATCCACC
ATTGA-------ACAATGGATGAAGATCCGGTCGACATATATAATTCGTAAACGGAAGAGCAATGCTACATCTACGTAAG
AAATGTTATGTGATTGATAAAGGCTTACTAACAGTATCGTAGATGTGACCCTAAAAAAAACAGTATCGTAGGTGTAGGGT
TCCTGTTGGTTATATTCCACCTCCGCCGTTAGGTTAATCACCCGTGCGGTAGAAGCTCTCGGACATGTAGGAGTAGATTC
CAAGGAGAAAACCTCCTCCAACTCCAAGTATCTAGTCCAAGCACAGCCTCCATCACGCATGCATGCAGCTTTGCCAG--C
ACTTGACCACCATCATGCCTATTTAAGCTTGCACTCTTGGCGTGAACAATCCTACTACCAGACTCTCTCTCTCACACATA
CACACACAGAGAGAGAGGTTCCAACCAAGCCGAC--------------------------------CGACCATGCCGCAG
ACGACCATAGCGGCCAAGGAGGTGGAGAAGGTGGTCACCGCCGACGAAGAGACAAC---AGATATCGTCGTCCATAGGGT
GCCGTACGGGGACCCGCCAGCGGTCCGGGCGCTGGACACGAGCGAGCTTGGCACGTGGTCCCTGTACCGCGCCCTCATCG
GCGAGTTCACGGCCTCCCTCATCCTCCTCTACGTGAGCATCGCCACCGTCATCGGGTACAGGAACCAGTCCTCCGCCGC-
--CGACGAGCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACTC
CACCAGCGGCGTCTCAGGTTGGTAT------ATACACATCTCTATC-ACACCATAT-----TTTCTCCGCCCATAATTAC
TTGTCATAGAAATGGATAGAAATGAGT--GTATCTAGAACTAATTGTCGTCTTTCAT----GTGCATGCAA----TGCAG
GTGGGCACATAAACCCGGCGGTGACGTTCGCGCTCTTCATGGCCGGGAAGGTGACGCTGGTGCGCGCGGTGCTGTACGTG
GCGGCGCAGTGCCTCGGCGCCGTCGTTGGCGTGGGCGTCGTCAAGGGGATCATGAAGCACCCCTACGACGACCTGGGGGG
CGGCGCCAACGCGGTGGCCGGGGGGTACTCGCTCGGGGCGGCCCTTGGCGCGGAGACCTTGGGCACCTTCGTCCTCGCCT
ACGCCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTACGTACCAGACG--CCT-----
-TCTCCTCTCACTCACTCACTCTCAGCTAGCTAGCTAGCTCGTGGTGATCACGGCCGGAAGTGCCTATATACTATGTATA
TG--------------ATGGTTTGTCGTCGATTAACTGCGTGCAGCTGGTGGCGGCGCTCCCGATCGGCATGGCGGTGTT
CGTGGTGCACCTGGCCACCATCCCGATCACCGGCACGGGCATCAACCCGGCGAGGAGCCTGGGCGCCGCCGTGCTGTACA
ACCAGCACGAAACCTGGAAGCAACACGTACGTACGTGGGACCCATTAATTGCTGTTGTTAGAAAA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------TTAATGAGATTA
AAATAAAGTGTCCCGTTGATGATCTGCATGCAGTGGATCTTCTGGGTCGGGCCTTTCACCGGCGCGGCCATGGCGGCGTT
CTACCACAAGATCGTGCTGCGCGACGGGGCTGTGGTGAAGGAGTCGCTGGCGGCGATGGGCTCCTTCAAGAGGAACAGCT
CCACCGCTTGAAGATCGATCGTGGAGATCGAGGAGACCATGCATGC-----GCATGCGTATAACAGTAGGTACTATTGCT
TCGTCGCTACAAGTGGGTCCCATGCCATGTCGGTGCCACTTCAGCCGTATACGATGCTATATGTGTCGACGCATTTTACG
TCTACGAATGAGATTAGCGCGTTC-------------GTGCCAAGTTTTAGAGCCGGTTTGACATATTTTTCAAATTCAG
ACAATAGAGTGAACATCCATAATAAGTTTAATCATCACTGGTGTATTTACCTCTTTTTCATCCGTGTAATGAGAATAAAA
ACTT-----GTTGGTCCCTTTTTAC--TACCTCTCTTGGCCCTGTAACGTACGGAATCTTGCTA-TAGTACCGTTGGTTA
AT--TAAGCGTGTCTTGATGTGTGTTGTTCGTTAACATGTGAGATCACTGCTGCAGGATGCAAATAGTTTTAAATTACTT
CCTCTGACATAGTTTTAAACCGCCGTCTTATGTGAAGGTGTGCGATAGGGGTCC-ACCGCACAAGACCCAGACTAATCGT
CTGCGATTGCTCCTCAGACCACACACGAAGACACTAAAGTGCACGTGTGTGATCGGGAGAGCTATCTGGGACAAGCTGTA
TGAGACTTGCTAAACATCCCACACAATTTGCTTAAACAAAATGTTTGCATTAGTATGGTATATCATGCACGATGCGGCCT
AAAAACACTTGTGCGATAGGGCTACCTATCAGACTATCACCCGCGCTTTTCAAACGCTTGCGGCTGGCAACATATCGCAA
ACAGTTGTCTAGGAGACTAGGACGGCATCACGATCTGC-AAATCCACCAGATTACCCTCCCTATAGGGTTTTTTAGCGTG
TAACAAGGGCACTCCCGAGAGATATCGGGACCGTGAGATGTTAAGTTAATCAGCGGAGTAAAAAAATGGTCAAATGATAG
CGAGAATTCAGA--------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr7B_774
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-------------------------------------TCACCTGTGCAGTAGAAGCTCACGGACACGT---AGTGGATTC
CAAGGAGAGAACCTCCTCCAAGT-----------ATCTAAGCACAGTCTCCCTCACGCA--------GCTGTGCAAACA-
-CTTCACCACGAC---CCCTATTTAAGCTTCCTCTCATGGCGTGGACAATCCTAG-------------------------
----------------------AACCAAGCTAGATAAAATCCTCTGCCTTGCCTTGGAGCTCAACTCGACCATGCCGTCG
CCGATCCTACCGGCCAAGGAGGTGGAGGAGGTGGTCACCGCCAACGAAGAGGTGAC---AGATATCATAGTCCAGAGGGT
GCCGTACTGGGACCCTCCGACGGTCCGGGCGCTGGACACGAGCGAGCTGACCACCTGGTCTCTCTACCGCGCCCTCATCG
GCGAGTTCACGGCCTCCCTCATCCTCCTCTACGTGAGCATCGCCACCGTCATCGGGTACCGGAACCAGTCCTCCGGCGCC
GACGA---GCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACTC
CACCAGCGGCGTCTCAGGCACGCACGCACGCATACACATCTCCGCA-ACAACATAC-----ATACAGGTATGCGCAAGTT
GTTGCGGCGATT--------------------------AATTATCATCGCCTCCCGT----G--------A----TGCAG
GTGGGCACATAAACCCGGCAGTGACGTTCGCGCTGTTCATCGCCGGGAAGGTGACGCTGGTGCGCTCGGTGCTGTACGTG
GCGGCGCAGTGCCTCGGCGCCGTCGTCGGCGTGGGCATCGTGAAGGGGATCATGAAGCACCCCTACGACGACTTCGGCGG
CGGCGCCAACGCGGTGGCCGGGGGGTACTCTCTCGGGGCGGCCCTCGGCGCGGAGATCTTCGGCACCTTCGTCCTCGCCT
ACACCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTACGTCCATCGCTCTCCT-----
-TCTCCTCTC----------------------AGCTAGCTCGCCGTGATCACGGCCGGCGGC---------------ATC
TGTCGAACCTGCATATATGATTTGTC----GTTAAT----TGCAGCTGGTGGCGGCGCTACCGATCGGTTTGTCGGTGTT
CGTGGTGCACCTGGCGACCATCCCGATCACCGGCACCGGCATCAACCCGGCCAGGAGCCTGGGCGCCGCCGTCCTGTACA
ACCAGCACAAAACCTGGAAGCAACACGTACGTG-----------------------------------------------
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-------------------------------------------------------------------------
>chr1B_895
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----GACCACGATCATACCTATTTAAGCTTTAACTCTTGGTGTGGATACTCCTATTACCAGACTGCCATTGCCATACACA
CAC--------------GTTCCAACCAAGCCGGC--------------------------------TGACCATGTCGACC
ACTATCATAGTGGCCAAGGAGGTGGAGAAGGTGGTCACCGCCGACGAAGAGATAATAGTAGATAACATCGTCCAGAGGGT
GCCGTACTCGGACCCGCCGGCCGTCCGGGCGCTGGACACGAGTGAGCTGACCACGTGTTCCCTGTACCGTGCCCTCATCG
GCGAGTTCACGGCCTCTCTCGTCCTCCTCAACGGGAGCATCGCGACCGTCGTGGGGTACAGAAACCAGTCATCGGCCGCC
GACGA---GCGGTGCACCGGCGTCCGCTACCTTGGCGTCGCGTGGTCCTTCGGTGCCACCGTCTCCGCCCTCGTCTACTC
TACCAG-GGCGTCTCAGGTAGGTAT------ATACACATCTATTTT-ACAACATAC-----TCTTTCCGTCCATAATTAC
TTTTCACAGAAATGTGTAGAAATGGGT--GTATCTTGAACTAATTGTCGCGTTCCAT----G----TGTAA----TGCAC
GTGGGCACATAAACCCGGCAGTGACATTCGCGCTCTTCATGGACGGGAAGCTGACGCTGGTGTGCTCGGT----------
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-------------------------------------------------------------------------
>chr7D_995
--------------------------------------------------------------------------------
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CCGATCCTGCCGGCCAAGGAGGTGGAGGAGGTGGTCACCGCCAACGAAGAGGTGAC---AGACATCATCGTCCAGAGGGT
GCCGTACTGGGACCCTCCGACGGTCCGGGCGCTGGACACGAGCGAGCTGACCACCTGGTCCCTCTACCGCGCCCTCATCG
GCGAGTTCACCGCCTCCCTCATCCTCCTCTACGTGAGCATCGCCACCGTCATCGGGTACCGGAACCAGTCCTCCGCCGCC
GACGA---GCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACTC
CACCAGCGGCGTCTCAGGCACGCACGCATGCATACACATCTCCCGTGACCACATAC-----ATACAGGTGTGCGCAAGTT
GTTGCGGCGATT--------------------------AATTATCATCGCCTCCCGT----G--------ATGTGTGCAG
GTGGGCACATAAACCCGGCAGTGACGTTCGCGCTGTTCATCGCCGGGAAGGTGACGCTGGTGCGCTCGGTGCTGTACGTG
GCGGCGCAGTGCCTCGGCGCCGTCGTCGGCGTGGGCATCGTGAAGGGGATCATGAAGCACCCCTACGACGACTTCGGCGG
CGGCGCCAACGCGGTGGCCGGGGGGTACTCGCTCCGGGCGGCCCTCGGCGCGGAGATCTTCGGCACCTTCGTCCTCGCCT
ACACCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTACGTCGATCGCGCGCCTTCTCC
TTCTCCTCTC----------------------AGCTAGCTCGCCGTGATCACGGCCGGCGGC---------------ATC
TG--------------ATGATCTGTC----GCTAAT----TGCAGCTGGTGGCGGCTCTCCCAATCGGTTTGGCGGTGTT
CGTGGTGCACCTGGCGACCATCCCGATCACCGGCACGGGCATCAACCCGGCGAGGAGCCTGGGCGCCGCCGTGCTGTACA
ACCAGCACAAAACCTGGAAGCAACACGTACGTGC----------------------------------------------
--------------------------------------------------------------------------------
------------GATCCATGCACCATGTATTTAAATCGTACTGTATACAATTCCTGTAGCCATTGATTTTGTTGGAATGA
GATTGAAGTGCTCCATTGATCTGC----TGCAGTGGATCTTCTGGGTCGGGCCCTTCACCGGCGCGGCCCTGGCGGCGTT
CTACCACAAGATCGTGCTGCGCGACGAGGCTGTGGTGAAGGAGTCGCTAGAAAAGCTGGGCTCGCTCAAGAGGAGCGGCT
CGACCGCTTGAAGGTCGA-GA--------GAGGTGACCATGCGCAC-----GCATGCATATACA-----G----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TATTTTTCATCGGTGTAAAGAGGATCGAG
AAGTTGTTGGTTGGTTTTTAGTCTTTTTACTTCTCTCGGCCCTGTAATGTACGGAATCTTGCTC-TAGTGTCGTTGGTTA
AT--TAAGCGTGTCTTGATGTGTG--------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr7A_995
--------------------------------------------------------------------------------
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CCGATCCTGCCGGCCAAGGAGGTGGAGGAGGTGGTCACCGCCAACGAAGAGGTGAC---AGACATCATCGTCCAGAGGGT
GCCCTACTGGGACCCTCCGACGGTCCGGGCGCTGGACACGAGCGAGCTGACCACCTGGTCCCTCTACCGCGCCCTCATCG
GCGAGTTCACCGCCTCCCTCATCCTCCTCTACGTCAGCATCGCCACCGTCATCGGGTACCGGAACCAGTCCTCCGCCGCC
GACGA---GCGGTGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGTCCTTCGGCGCCACCGTCTCCGTCCTCGTCTACTC
CACCAGCGGCGTCTCAGGCACGCACGCA----TACACATCTCCCGTGACCACATAC-----ATACAGGTACGCGCAAGTT
GTTGCGGCGATT--------------------------AATTATCATCGCCTCCCGTGATCG--------A----TGCAG
GTGGGCACATAAACCCGGCGGTGACGTTCGCGCTGTTCATCGCCGGGAAGGTGACGCTGGTGCGCTCGGTGCTGTACGTG
GCGGCGCAGTGCCTCGGCGCCGTCGTCGGCGTGGGCATCGTGAAGGGGATCATGAAGCACCCCTACGACGACTTCGGCGG
CGGCGCCAACGCGGTGGCCGGGGGCTACTCGCTCGGCGCGGCCCTCGGCGCGGAGATCTTCGGCACCTTCGTCCTCGCCT
ACACCGTCTTCTCCGCCACCGACCCCAAGCGCACCGCCCGCGACGCCTTCGTCCCCGTACGTCCATCGCGCGCCTTCTCC
TTCTCCTCTC----------------------AGCTAGCTCGCCGTGATCACGGCCGGC---------------------
TG--------------ATGATCTGTC----ATTAAT----CGCAGCTGGTGGCGGCGCTGCCGATCGGGCTGGCGGTGTT
CGTGGTGCACCTGGCGACCATCCCGATCACCGGCACGGGCATCAACCCGGCGAGGAGCCTGGGCGCCGCCGTGCTGTACA
ACCAGCACAAGACCTGGAAGCAGCACGTACGTGA----------------------------------------------
--------------------------------------------------------------------------------
------------GATCCATGCACCATGTATTTAAATCGCACTGTATACAATTCCTGTAGCCATTGCTTTTGCTCCAATGA
GATTGAAGTGCTCCGTTGATCTGCC----GCAGTGGATCTTCTGGGTCGGGCCCTTCACCGGCGCGGCCCTGGCGGCGTT
CTACCACAAGATCGTGCTGCGCGACGAGGCGGTGGTGAAGGAGTCGCTAGAAAAGCTGGGCTCGCTCAAGAGGAGCGGCT
CGACCGCTTGAAGGTCGGGGA--------GAGGAGACCATGCGCCACGCATGCATGCATATACA-----G----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TATTTTTCATCGGTGTAAAGAGGATCGAA
AAGTTGTTGGTTGGTTTCTAGTCTTTTTACTTCTCTCGGCCCTGTAATGTACGGAATCTTGCTCTTAGTGTCGTTGGATA
ATTATAAGCGTGTCTTGATGTG----------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr5D_1069
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------GGC
GCCCTACTGGGACCCGCCGCCGGCCCCGCTGCTGGACACGAGCGAGCTGACCCGGTGGTCGCTGTACCGCGCGGTCATCG
CCGAGTTCGTGGCCACGCTCATCTTCCTCTACGTCAGCCTCGCCACCGTCATCGGCTACAAGAGCCAGTC------CGCC
GCCCA---GCCGGGCACCGGCGTCGGCTACCTCGGCGTCGCCTGGGCCTTCGGCGCCACCATCTTCGTCCTCGTCTACTG
CACCGGCGGCGTCTCAGGCACGCACGCACGCACGCACATATGCATACG-------------TCCATCTCCCTAGAACAAC
TTAACCCACACATGGATACGATTCGATACGTGAACTGTCGAGTGTACTGC-------------------------TGCAG
GTGGCCACATCAACCCGGCGGTGACGTTCGGGCTGTTCGTGGGGAGGAAGCTGTCGCTGGTGCGCACGGTGCTGTACATC
GTGGCGCAGTGCCTCGGCGCCATCTGCGGCGCGGGCATGGTGAAGGGGATCGCGGGGGCCAGCTACGAGACCCTCGGCGG
CGGCGCGAACTCGGTGGCCGACGGCGTCTCGGTGGGGGCGGGGCTCGGCGCGGAGATCGCCGGCACGTTCGTGCTGGTGT
ACACCGTGCTCTCCGCCACCGACCCCAAGCGCACCGCGCGCGACTCCTTCATCCCCGT----------------------
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-------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---
---------------SS----------S-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS---------------------------------------------------SSSSSSSSSSSSSSSSSSSS----
----------------------------------------------------S--S------S-----------------
-SSS---SSSSSSSSSSSSSSS-----SS------------------S--------------------------------
-------------------------------------------S-------S--------S-------------------
-----------------------------------------SSSSSSSSSSSS---------------------------
-------------------------------S----------S----------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S---------------------------------------------------------S-------------
--------S-----------------------------------------------------------------------
---------------------------S-----------------SS---------------------------------
---------------------------------------------------S-------------------S--------
----------------------------------------S---------------------------------------
----SSS---------------------------SS-SS-----------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------S--------------------------------S--------------------------------------
---S------S----------S----------------------------------SSSSS-----------S-------
---------------------------SS-----------S---S--------S--------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------S-S------SS--SSS--------------
-----------------------------S--------------------------------------------------
---------------------------------------------------------------S----------------
---------------------------------------------SS-S---SS-SS-SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS-S-SS-----S----S-S-S--S-SS--SSSS-----SSSSSS---S-SSSSSSS--S--SSSSS---
S--S--SS-SS-SS-SSSS----SSSSS--SSS-S--S-SSS-SSSSSSS--SS--------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-----S----S---------------S-
-----------------------------S-----S----------S------S---S-S--------S-S---------
------------------S-SS-SSSSSSSSSSSSSS---------------SS-S-------S---------------S
-S-S--SS-----S--SS--S-S-----S--S--------S-----------S------------S--------------
S---------------------------------S---------------------------------------------
--------------------------SS-S-----S-S-S-S-------SS-----S-------S-----S---S-S---
S-SSS-----------S------S-----S------------S--------SS-S----S--------S---S-------
----------------S-S----------S------------------------------------S--S------S---
-----SS------S---------S-----------SS--------------S---S-S--------S-----S-------
-----SS-----------------S-S----S----------S------------SS-S---------------------
------S-----------------S-------------S------S-------S------------SS------------
-----------S-S------------S----S---------S----------S-----S-----SSSS-SS-SSSS----
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_47
---------------------------GAGGTCGGCAGTCCATATGG---------------------------------
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-------------------------------------------------------------------------
>reverse_2446
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------GCACTGCACTACTACTCCGT---------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>forward_2175
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------ACGCC
TTCTCCTCTCACTCT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_3283
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CACAGTTTTGAACCGCGGTC----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------
