Multiple sequence alignment - TraesCS4B01G018000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4B01G018000 chr4B 100.000 2692 0 0 1 2692 13276411 13279102 0.000000e+00 4972
1 TraesCS4B01G018000 chr4D 88.821 1798 114 44 211 1956 7408647 7410409 0.000000e+00 2126
2 TraesCS4B01G018000 chr4D 93.023 215 14 1 1 214 374099514 374099728 2.010000e-81 313
3 TraesCS4B01G018000 chr4D 90.955 199 15 3 2181 2379 7411049 7411244 5.710000e-67 265
4 TraesCS4B01G018000 chr4A 83.460 1312 113 58 617 1870 596239625 596238360 0.000000e+00 1125
5 TraesCS4B01G018000 chr4A 86.489 1051 75 32 741 1746 596214781 596215809 0.000000e+00 1092
6 TraesCS4B01G018000 chr4A 86.329 790 63 24 617 1375 596207675 596208450 0.000000e+00 819
7 TraesCS4B01G018000 chr4A 86.329 790 63 24 617 1375 596211322 596212097 0.000000e+00 819
8 TraesCS4B01G018000 chr4A 88.971 680 44 20 709 1375 596204141 596204802 0.000000e+00 811
9 TraesCS4B01G018000 chr4A 90.119 253 19 5 285 532 596211027 596211278 9.300000e-85 324
10 TraesCS4B01G018000 chr4A 89.723 253 20 5 285 532 596207380 596207631 4.320000e-83 318
11 TraesCS4B01G018000 chr4A 91.866 209 17 0 1 209 546578222 546578014 2.620000e-75 292
12 TraesCS4B01G018000 chr2B 95.673 208 9 0 1 208 152133727 152133520 4.290000e-88 335
13 TraesCS4B01G018000 chr7B 93.237 207 14 0 1 207 531261733 531261939 3.370000e-79 305
14 TraesCS4B01G018000 chr7B 92.344 209 11 1 1 209 22543421 22543218 2.620000e-75 292
15 TraesCS4B01G018000 chr7B 91.346 208 18 0 1 208 22545650 22545857 4.390000e-73 285
16 TraesCS4B01G018000 chr2A 92.823 209 15 0 1 209 697069614 697069406 1.210000e-78 303
17 TraesCS4B01G018000 chr7A 92.308 208 16 0 1 208 239764646 239764853 2.030000e-76 296
18 TraesCS4B01G018000 chr6A 91.866 209 17 0 1 209 581457096 581457304 2.620000e-75 292


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4B01G018000 chr4B 13276411 13279102 2691 False 4972.000000 4972 100.000000 1 2692 1 chr4B.!!$F1 2691
1 TraesCS4B01G018000 chr4D 7408647 7411244 2597 False 1195.500000 2126 89.888000 211 2379 2 chr4D.!!$F2 2168
2 TraesCS4B01G018000 chr4A 596238360 596239625 1265 True 1125.000000 1125 83.460000 617 1870 1 chr4A.!!$R2 1253
3 TraesCS4B01G018000 chr4A 596204141 596215809 11668 False 697.166667 1092 87.993333 285 1746 6 chr4A.!!$F1 1461

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 267 0.036732 ACAAAGGCTGAGGCGAATGA 59.963 50.0 13.62 0.0 39.81 2.57 F
1391 11374 0.179076 CCATGCCAGCGACATACTGA 60.179 55.0 0.00 0.0 37.32 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1424 11420 0.097499 CTGCACACACACACACACAG 59.903 55.0 0.00 0.0 0.00 3.66 R
2482 12962 0.034756 TGAGTGGTGACCATTGTCGG 59.965 55.0 7.94 0.0 44.86 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.806949 TTAAAGAAGATGGCAGGGTGT 57.193 42.857 0.00 0.00 0.00 4.16
23 24 2.683211 AAAGAAGATGGCAGGGTGTT 57.317 45.000 0.00 0.00 0.00 3.32
25 26 2.206576 AGAAGATGGCAGGGTGTTTC 57.793 50.000 0.00 0.00 0.00 2.78
26 27 1.707427 AGAAGATGGCAGGGTGTTTCT 59.293 47.619 0.00 0.00 0.00 2.52
29 30 0.244721 GATGGCAGGGTGTTTCTTGC 59.755 55.000 0.00 0.00 0.00 4.01
30 31 0.469705 ATGGCAGGGTGTTTCTTGCA 60.470 50.000 0.00 0.00 0.00 4.08
31 32 0.685785 TGGCAGGGTGTTTCTTGCAA 60.686 50.000 0.00 0.00 0.00 4.08
33 34 1.134551 GGCAGGGTGTTTCTTGCAAAA 60.135 47.619 0.00 0.00 0.00 2.44
34 35 2.626840 GCAGGGTGTTTCTTGCAAAAA 58.373 42.857 0.00 1.75 0.00 1.94
36 37 3.002553 GCAGGGTGTTTCTTGCAAAAATG 59.997 43.478 0.00 1.46 0.00 2.32
37 38 3.002553 CAGGGTGTTTCTTGCAAAAATGC 59.997 43.478 0.00 0.00 0.00 3.56
38 39 2.032979 GGGTGTTTCTTGCAAAAATGCG 60.033 45.455 0.00 0.00 37.69 4.73
39 40 2.032979 GGTGTTTCTTGCAAAAATGCGG 60.033 45.455 0.00 0.00 37.69 5.69
40 41 2.032979 GTGTTTCTTGCAAAAATGCGGG 60.033 45.455 0.00 0.00 37.69 6.13
41 42 1.069973 GTTTCTTGCAAAAATGCGGGC 60.070 47.619 0.00 0.00 37.69 6.13
42 43 0.943359 TTCTTGCAAAAATGCGGGCG 60.943 50.000 0.00 0.00 37.69 6.13
43 44 1.372748 CTTGCAAAAATGCGGGCGA 60.373 52.632 0.00 0.00 37.69 5.54
44 45 0.943359 CTTGCAAAAATGCGGGCGAA 60.943 50.000 0.00 0.00 37.69 4.70
45 46 0.943359 TTGCAAAAATGCGGGCGAAG 60.943 50.000 0.00 0.00 37.69 3.79
46 47 1.080839 GCAAAAATGCGGGCGAAGA 60.081 52.632 0.00 0.00 0.00 2.87
47 48 1.344226 GCAAAAATGCGGGCGAAGAC 61.344 55.000 0.00 0.00 0.00 3.01
58 59 3.691342 CGAAGACCGGTCCAGCCA 61.691 66.667 30.82 0.00 36.97 4.75
59 60 2.047179 GAAGACCGGTCCAGCCAC 60.047 66.667 30.82 12.00 36.97 5.01
60 61 3.607370 GAAGACCGGTCCAGCCACC 62.607 68.421 30.82 4.01 36.97 4.61
62 63 4.394712 GACCGGTCCAGCCACCTG 62.395 72.222 24.75 0.00 38.85 4.00
73 74 2.987547 CCACCTGGCTGCCACTTG 60.988 66.667 19.30 16.70 0.00 3.16
74 75 2.203394 CACCTGGCTGCCACTTGT 60.203 61.111 19.30 12.40 0.00 3.16
75 76 2.113986 ACCTGGCTGCCACTTGTC 59.886 61.111 19.30 0.00 0.00 3.18
76 77 3.052082 CCTGGCTGCCACTTGTCG 61.052 66.667 19.30 6.84 0.00 4.35
77 78 2.031012 CTGGCTGCCACTTGTCGA 59.969 61.111 19.30 0.00 0.00 4.20
78 79 2.031012 TGGCTGCCACTTGTCGAG 59.969 61.111 19.30 0.00 0.00 4.04
79 80 3.426568 GGCTGCCACTTGTCGAGC 61.427 66.667 15.17 0.00 0.00 5.03
80 81 2.358003 GCTGCCACTTGTCGAGCT 60.358 61.111 0.00 0.00 0.00 4.09
81 82 2.675056 GCTGCCACTTGTCGAGCTG 61.675 63.158 0.00 0.00 0.00 4.24
82 83 1.301244 CTGCCACTTGTCGAGCTGT 60.301 57.895 0.00 0.00 0.00 4.40
83 84 1.563435 CTGCCACTTGTCGAGCTGTG 61.563 60.000 0.00 0.00 0.00 3.66
85 86 0.671781 GCCACTTGTCGAGCTGTGAT 60.672 55.000 11.63 0.00 32.72 3.06
87 88 2.534298 CCACTTGTCGAGCTGTGATAG 58.466 52.381 11.63 0.00 32.72 2.08
88 89 2.534298 CACTTGTCGAGCTGTGATAGG 58.466 52.381 0.00 0.00 32.72 2.57
89 90 1.134965 ACTTGTCGAGCTGTGATAGGC 60.135 52.381 0.00 0.00 0.00 3.93
90 91 0.175760 TTGTCGAGCTGTGATAGGCC 59.824 55.000 0.00 0.00 0.00 5.19
92 93 2.028190 CGAGCTGTGATAGGCCGG 59.972 66.667 0.00 0.00 0.00 6.13
94 95 1.365633 GAGCTGTGATAGGCCGGAG 59.634 63.158 5.05 0.00 0.00 4.63
95 96 1.075970 AGCTGTGATAGGCCGGAGA 60.076 57.895 5.05 0.00 0.00 3.71
99 100 2.307768 CTGTGATAGGCCGGAGACTAA 58.692 52.381 5.05 0.00 0.00 2.24
100 101 2.693591 CTGTGATAGGCCGGAGACTAAA 59.306 50.000 5.05 0.00 0.00 1.85
102 103 3.321111 TGTGATAGGCCGGAGACTAAATC 59.679 47.826 5.05 1.46 0.00 2.17
103 104 3.321111 GTGATAGGCCGGAGACTAAATCA 59.679 47.826 5.05 4.20 0.00 2.57
104 105 4.021016 GTGATAGGCCGGAGACTAAATCAT 60.021 45.833 5.05 0.00 0.00 2.45
105 106 4.220821 TGATAGGCCGGAGACTAAATCATC 59.779 45.833 5.05 0.00 0.00 2.92
108 109 2.158957 GGCCGGAGACTAAATCATCACA 60.159 50.000 5.05 0.00 0.00 3.58
110 111 3.743396 GCCGGAGACTAAATCATCACATC 59.257 47.826 5.05 0.00 0.00 3.06
111 112 4.310769 CCGGAGACTAAATCATCACATCC 58.689 47.826 0.00 0.00 0.00 3.51
112 113 4.202253 CCGGAGACTAAATCATCACATCCA 60.202 45.833 0.00 0.00 0.00 3.41
113 114 4.987285 CGGAGACTAAATCATCACATCCAG 59.013 45.833 0.00 0.00 0.00 3.86
125 126 0.540365 ACATCCAGTGCAAGTTGGGG 60.540 55.000 4.75 8.13 35.13 4.96
127 128 1.072266 ATCCAGTGCAAGTTGGGGTA 58.928 50.000 4.75 0.00 35.13 3.69
130 131 1.176527 CAGTGCAAGTTGGGGTATGG 58.823 55.000 4.75 0.00 0.00 2.74
131 132 0.777446 AGTGCAAGTTGGGGTATGGT 59.223 50.000 4.75 0.00 0.00 3.55
132 133 0.887933 GTGCAAGTTGGGGTATGGTG 59.112 55.000 4.75 0.00 0.00 4.17
134 135 0.039035 GCAAGTTGGGGTATGGTGGA 59.961 55.000 4.75 0.00 0.00 4.02
135 136 1.955208 GCAAGTTGGGGTATGGTGGAG 60.955 57.143 4.75 0.00 0.00 3.86
136 137 1.354368 CAAGTTGGGGTATGGTGGAGT 59.646 52.381 0.00 0.00 0.00 3.85
137 138 1.755200 AGTTGGGGTATGGTGGAGTT 58.245 50.000 0.00 0.00 0.00 3.01
138 139 1.354368 AGTTGGGGTATGGTGGAGTTG 59.646 52.381 0.00 0.00 0.00 3.16
139 140 0.039035 TTGGGGTATGGTGGAGTTGC 59.961 55.000 0.00 0.00 0.00 4.17
140 141 1.136961 TGGGGTATGGTGGAGTTGCA 61.137 55.000 0.00 0.00 0.00 4.08
141 142 0.258774 GGGGTATGGTGGAGTTGCAT 59.741 55.000 0.00 0.00 0.00 3.96
142 143 1.341976 GGGGTATGGTGGAGTTGCATT 60.342 52.381 0.00 0.00 0.00 3.56
143 144 2.456577 GGGTATGGTGGAGTTGCATTT 58.543 47.619 0.00 0.00 0.00 2.32
144 145 2.831526 GGGTATGGTGGAGTTGCATTTT 59.168 45.455 0.00 0.00 0.00 1.82
145 146 3.368323 GGGTATGGTGGAGTTGCATTTTG 60.368 47.826 0.00 0.00 0.00 2.44
161 162 6.836577 GCATTTTGCAAGTTTGGTACTAAA 57.163 33.333 0.00 0.00 44.26 1.85
162 163 7.420184 GCATTTTGCAAGTTTGGTACTAAAT 57.580 32.000 7.72 0.00 44.26 1.40
163 164 7.509797 GCATTTTGCAAGTTTGGTACTAAATC 58.490 34.615 7.72 2.52 44.26 2.17
164 165 7.170658 GCATTTTGCAAGTTTGGTACTAAATCA 59.829 33.333 7.72 2.10 44.26 2.57
165 166 9.206870 CATTTTGCAAGTTTGGTACTAAATCAT 57.793 29.630 7.72 0.00 35.54 2.45
166 167 8.810652 TTTTGCAAGTTTGGTACTAAATCATC 57.189 30.769 7.72 0.00 35.54 2.92
168 169 6.908825 TGCAAGTTTGGTACTAAATCATCAC 58.091 36.000 7.72 0.00 35.54 3.06
169 170 6.488344 TGCAAGTTTGGTACTAAATCATCACA 59.512 34.615 7.72 0.39 35.54 3.58
170 171 7.176515 TGCAAGTTTGGTACTAAATCATCACAT 59.823 33.333 7.72 0.00 35.54 3.21
172 173 9.912634 CAAGTTTGGTACTAAATCATCACATTT 57.087 29.630 7.72 0.00 35.54 2.32
174 175 9.295825 AGTTTGGTACTAAATCATCACATTTCA 57.704 29.630 7.72 0.00 34.56 2.69
186 187 7.864108 TCATCACATTTCATACAAGTTAGGG 57.136 36.000 0.00 0.00 0.00 3.53
188 189 8.544622 TCATCACATTTCATACAAGTTAGGGTA 58.455 33.333 0.00 0.00 0.00 3.69
189 190 8.612619 CATCACATTTCATACAAGTTAGGGTAC 58.387 37.037 0.00 0.00 0.00 3.34
190 191 7.913789 TCACATTTCATACAAGTTAGGGTACT 58.086 34.615 0.00 0.00 0.00 2.73
191 192 8.380099 TCACATTTCATACAAGTTAGGGTACTT 58.620 33.333 0.00 0.00 38.87 2.24
198 199 0.989602 AGTTAGGGTACTTGGGGTGC 59.010 55.000 0.00 0.00 0.00 5.01
199 200 0.989602 GTTAGGGTACTTGGGGTGCT 59.010 55.000 0.00 0.00 0.00 4.40
200 201 1.353358 GTTAGGGTACTTGGGGTGCTT 59.647 52.381 0.00 0.00 0.00 3.91
201 202 1.750022 TAGGGTACTTGGGGTGCTTT 58.250 50.000 0.00 0.00 0.00 3.51
202 203 0.857675 AGGGTACTTGGGGTGCTTTT 59.142 50.000 0.00 0.00 0.00 2.27
203 204 2.067386 AGGGTACTTGGGGTGCTTTTA 58.933 47.619 0.00 0.00 0.00 1.52
204 205 2.165167 GGGTACTTGGGGTGCTTTTAC 58.835 52.381 0.00 0.00 0.00 2.01
205 206 2.165167 GGTACTTGGGGTGCTTTTACC 58.835 52.381 0.00 0.00 40.10 2.85
206 207 2.224942 GGTACTTGGGGTGCTTTTACCT 60.225 50.000 0.00 0.00 40.66 3.08
207 208 2.287977 ACTTGGGGTGCTTTTACCTC 57.712 50.000 0.00 0.00 41.82 3.85
208 209 1.780919 ACTTGGGGTGCTTTTACCTCT 59.219 47.619 0.00 0.00 41.99 3.69
209 210 2.224793 ACTTGGGGTGCTTTTACCTCTC 60.225 50.000 0.00 0.00 41.99 3.20
234 235 3.634397 TTAATGCTCTGCTAGGTTGCT 57.366 42.857 0.00 0.00 0.00 3.91
236 237 0.179936 ATGCTCTGCTAGGTTGCTCC 59.820 55.000 0.00 0.00 0.00 4.70
241 245 1.483827 TCTGCTAGGTTGCTCCATGAG 59.516 52.381 0.00 0.00 39.02 2.90
247 251 4.443457 GCTAGGTTGCTCCATGAGATACAA 60.443 45.833 0.00 0.00 39.02 2.41
261 265 2.171448 AGATACAAAGGCTGAGGCGAAT 59.829 45.455 0.00 0.00 39.81 3.34
262 266 1.737838 TACAAAGGCTGAGGCGAATG 58.262 50.000 0.00 3.85 39.81 2.67
263 267 0.036732 ACAAAGGCTGAGGCGAATGA 59.963 50.000 13.62 0.00 39.81 2.57
353 6957 6.258727 TCAAAGAATAGAATTCGACCATGAGC 59.741 38.462 0.00 0.00 0.00 4.26
355 6959 4.346418 AGAATAGAATTCGACCATGAGCCT 59.654 41.667 0.00 0.00 0.00 4.58
361 6965 0.259065 TCGACCATGAGCCTAGGACT 59.741 55.000 14.75 9.37 0.00 3.85
424 7032 6.636705 CATGTCCATGAGTTTTGGATGAAAT 58.363 36.000 0.87 0.00 44.75 2.17
426 7034 7.773489 TGTCCATGAGTTTTGGATGAAATAA 57.227 32.000 0.00 0.00 44.75 1.40
433 7041 6.915300 TGAGTTTTGGATGAAATAACAACACG 59.085 34.615 0.00 0.00 32.53 4.49
480 7088 1.506493 GACCTTGAGTCACACAGCAG 58.494 55.000 0.00 0.00 45.55 4.24
511 7119 4.091453 AGGTCCAAATTATTTTGCGACG 57.909 40.909 16.63 0.00 40.34 5.12
523 7131 2.684001 TTGCGACGATGTAATCCCTT 57.316 45.000 0.00 0.00 41.39 3.95
542 7150 5.359009 TCCCTTCTTCATTAGTACAGTACCG 59.641 44.000 7.13 0.00 0.00 4.02
652 7260 5.153950 AGTTGCACTTTGGGTGTTTTTAA 57.846 34.783 0.00 0.00 46.86 1.52
657 7265 7.454260 TGCACTTTGGGTGTTTTTAATTTTT 57.546 28.000 0.00 0.00 46.86 1.94
722 7337 0.383590 CTCTGATGCACGATCCGTCT 59.616 55.000 0.00 0.00 38.32 4.18
729 7344 0.317436 GCACGATCCGTCTCAGCTAG 60.317 60.000 0.00 0.00 38.32 3.42
955 10913 4.152625 GCCGATCGCACAGTGCAC 62.153 66.667 25.19 9.40 45.36 4.57
958 10916 2.733671 CGATCGCACAGTGCACCAG 61.734 63.158 25.19 9.45 45.36 4.00
987 10946 1.808133 GCCAGTTCACTCCGATCATCC 60.808 57.143 0.00 0.00 0.00 3.51
996 10958 1.004560 CCGATCATCCATCCACCCG 60.005 63.158 0.00 0.00 0.00 5.28
1386 11369 2.827190 CTGCCATGCCAGCGACAT 60.827 61.111 0.00 0.00 0.00 3.06
1387 11370 1.524393 CTGCCATGCCAGCGACATA 60.524 57.895 0.00 0.00 0.00 2.29
1388 11371 1.779025 CTGCCATGCCAGCGACATAC 61.779 60.000 0.00 0.00 0.00 2.39
1389 11372 1.524621 GCCATGCCAGCGACATACT 60.525 57.895 0.00 0.00 0.00 2.12
1390 11373 1.779025 GCCATGCCAGCGACATACTG 61.779 60.000 0.00 0.00 34.82 2.74
1391 11374 0.179076 CCATGCCAGCGACATACTGA 60.179 55.000 0.00 0.00 37.32 3.41
1392 11375 1.655484 CATGCCAGCGACATACTGAA 58.345 50.000 0.00 0.00 37.32 3.02
1393 11376 1.596260 CATGCCAGCGACATACTGAAG 59.404 52.381 0.00 0.00 37.32 3.02
1399 11395 2.094494 CAGCGACATACTGAAGTGGAGT 60.094 50.000 0.00 0.00 37.32 3.85
1402 11398 3.763902 CGACATACTGAAGTGGAGTGAG 58.236 50.000 0.00 0.00 0.00 3.51
1424 11420 3.467803 AGTGACTAACCACTTCTGTTGC 58.532 45.455 0.00 0.00 44.32 4.17
1431 11427 1.340017 ACCACTTCTGTTGCTGTGTGT 60.340 47.619 0.00 0.00 0.00 3.72
1458 11454 3.150949 CAGCTGTGACAGGGACCA 58.849 61.111 15.24 0.00 31.21 4.02
1460 11456 2.032681 GCTGTGACAGGGACCACC 59.967 66.667 15.24 0.00 40.67 4.61
1461 11457 2.818169 GCTGTGACAGGGACCACCA 61.818 63.158 15.24 0.00 43.89 4.17
1511 11519 1.002366 GAACACCTACTGATGCTGCG 58.998 55.000 0.00 0.00 0.00 5.18
1514 11522 2.362369 ACCTACTGATGCTGCGGCT 61.362 57.895 20.27 3.90 39.59 5.52
1607 11615 3.192922 GGGACGGTTGATTCGGCG 61.193 66.667 0.00 0.00 36.33 6.46
1610 11618 4.388499 ACGGTTGATTCGGCGGCT 62.388 61.111 7.21 0.00 0.00 5.52
1611 11619 3.864686 CGGTTGATTCGGCGGCTG 61.865 66.667 7.21 1.35 0.00 4.85
1612 11620 4.179579 GGTTGATTCGGCGGCTGC 62.180 66.667 9.72 9.72 41.71 5.25
1681 11698 0.460311 GCCTCGTTCCTAGCTGCTTA 59.540 55.000 7.79 0.00 0.00 3.09
1686 11703 3.782046 TCGTTCCTAGCTGCTTATGTTC 58.218 45.455 7.79 0.00 0.00 3.18
1693 11710 6.071320 TCCTAGCTGCTTATGTTCTCTGATA 58.929 40.000 7.79 0.00 0.00 2.15
1709 11726 5.772169 TCTCTGATATCGTCATGTGATTCCT 59.228 40.000 8.18 0.00 35.97 3.36
1730 11747 1.586154 CCGGGGCATGTTGTGAGTTC 61.586 60.000 0.00 0.00 0.00 3.01
1763 11780 0.748005 ATGGATGTGCCGCCTGTTAC 60.748 55.000 0.00 0.00 40.66 2.50
1764 11781 2.112815 GGATGTGCCGCCTGTTACC 61.113 63.158 0.00 0.00 0.00 2.85
1766 11783 1.369091 GATGTGCCGCCTGTTACCAG 61.369 60.000 0.00 0.00 38.50 4.00
1767 11784 2.032071 GTGCCGCCTGTTACCAGT 59.968 61.111 0.00 0.00 36.95 4.00
1769 11786 2.345991 GCCGCCTGTTACCAGTGA 59.654 61.111 0.00 0.00 36.95 3.41
1806 11831 0.036671 TGCTCCACTGCACATCAGAG 60.037 55.000 0.00 0.00 45.72 3.35
1824 11849 6.861065 TCAGAGGTGTGACTTGTTTTTATC 57.139 37.500 0.00 0.00 0.00 1.75
1849 11878 5.240844 GGTTATTATTATCCCCAGTGCACAC 59.759 44.000 21.04 1.81 0.00 3.82
1874 11903 0.179032 TTGTCACTTGGTGGTGCGAT 60.179 50.000 0.00 0.00 37.16 4.58
1875 11904 0.884259 TGTCACTTGGTGGTGCGATG 60.884 55.000 0.00 0.00 37.16 3.84
1876 11905 0.884704 GTCACTTGGTGGTGCGATGT 60.885 55.000 0.00 0.00 37.16 3.06
1881 11910 4.342665 TCACTTGGTGGTGCGATGTATATA 59.657 41.667 0.00 0.00 37.16 0.86
1897 11926 9.574458 CGATGTATATATAGTGCTAGCTTTTGT 57.426 33.333 17.23 2.47 0.00 2.83
1912 11941 8.182227 GCTAGCTTTTGTAACGAGGAATTAATT 58.818 33.333 7.70 0.00 0.00 1.40
1913 11942 9.704098 CTAGCTTTTGTAACGAGGAATTAATTC 57.296 33.333 18.22 18.22 36.08 2.17
1951 11980 3.374402 CGTCTCACGGAGCTGGGT 61.374 66.667 0.00 0.00 38.08 4.51
1956 11985 1.305802 TCACGGAGCTGGGTATGGT 60.306 57.895 0.00 0.00 0.00 3.55
1957 11986 0.907704 TCACGGAGCTGGGTATGGTT 60.908 55.000 0.00 0.00 0.00 3.67
1958 11987 0.035439 CACGGAGCTGGGTATGGTTT 60.035 55.000 0.00 0.00 0.00 3.27
1959 11988 1.208535 CACGGAGCTGGGTATGGTTTA 59.791 52.381 0.00 0.00 0.00 2.01
1969 12268 9.220767 GAGCTGGGTATGGTTTATTTATAGAAG 57.779 37.037 0.00 0.00 0.00 2.85
2064 12363 9.801873 ATTATTTGGCATTGTAGATGTTAACAC 57.198 29.630 11.22 5.31 0.00 3.32
2116 12416 3.408389 TTTTTGTGTGTGTGTGCGG 57.592 47.368 0.00 0.00 0.00 5.69
2117 12417 0.881796 TTTTTGTGTGTGTGTGCGGA 59.118 45.000 0.00 0.00 0.00 5.54
2118 12418 0.881796 TTTTGTGTGTGTGTGCGGAA 59.118 45.000 0.00 0.00 0.00 4.30
2119 12419 0.881796 TTTGTGTGTGTGTGCGGAAA 59.118 45.000 0.00 0.00 0.00 3.13
2120 12420 1.098869 TTGTGTGTGTGTGCGGAAAT 58.901 45.000 0.00 0.00 0.00 2.17
2121 12421 1.954927 TGTGTGTGTGTGCGGAAATA 58.045 45.000 0.00 0.00 0.00 1.40
2122 12422 1.870402 TGTGTGTGTGTGCGGAAATAG 59.130 47.619 0.00 0.00 0.00 1.73
2123 12423 1.871039 GTGTGTGTGTGCGGAAATAGT 59.129 47.619 0.00 0.00 0.00 2.12
2124 12424 2.289547 GTGTGTGTGTGCGGAAATAGTT 59.710 45.455 0.00 0.00 0.00 2.24
2125 12425 2.946329 TGTGTGTGTGCGGAAATAGTTT 59.054 40.909 0.00 0.00 0.00 2.66
2126 12426 4.024725 GTGTGTGTGTGCGGAAATAGTTTA 60.025 41.667 0.00 0.00 0.00 2.01
2127 12427 4.024725 TGTGTGTGTGCGGAAATAGTTTAC 60.025 41.667 0.00 0.00 0.00 2.01
2128 12428 4.024725 GTGTGTGTGCGGAAATAGTTTACA 60.025 41.667 0.00 0.00 0.00 2.41
2129 12429 4.575236 TGTGTGTGCGGAAATAGTTTACAA 59.425 37.500 0.00 0.00 0.00 2.41
2130 12430 5.239744 TGTGTGTGCGGAAATAGTTTACAAT 59.760 36.000 0.00 0.00 0.00 2.71
2131 12431 5.793457 GTGTGTGCGGAAATAGTTTACAATC 59.207 40.000 0.00 0.00 0.00 2.67
2132 12432 5.703592 TGTGTGCGGAAATAGTTTACAATCT 59.296 36.000 0.00 0.00 0.00 2.40
2133 12433 6.205853 TGTGTGCGGAAATAGTTTACAATCTT 59.794 34.615 0.00 0.00 0.00 2.40
2134 12434 7.081976 GTGTGCGGAAATAGTTTACAATCTTT 58.918 34.615 0.00 0.00 0.00 2.52
2135 12435 7.060633 GTGTGCGGAAATAGTTTACAATCTTTG 59.939 37.037 0.00 0.00 0.00 2.77
2136 12436 7.041030 TGTGCGGAAATAGTTTACAATCTTTGA 60.041 33.333 0.00 0.00 0.00 2.69
2173 12473 8.502738 AGCTAATATGTGGATAAAAAGGGAGAA 58.497 33.333 0.00 0.00 0.00 2.87
2213 12693 2.461695 TGGAAAGACACCTTTGGCAAA 58.538 42.857 12.79 12.79 42.30 3.68
2243 12723 0.995024 CCATGGAACAGGAGGGTTCT 59.005 55.000 5.56 0.00 46.40 3.01
2244 12724 1.065126 CCATGGAACAGGAGGGTTCTC 60.065 57.143 5.56 0.00 46.40 2.87
2261 12741 7.497595 AGGGTTCTCCAAAATTTAAAGTGAAC 58.502 34.615 14.99 14.99 38.24 3.18
2269 12749 9.114952 TCCAAAATTTAAAGTGAACCAAATTCC 57.885 29.630 0.00 0.00 36.36 3.01
2270 12750 8.897752 CCAAAATTTAAAGTGAACCAAATTCCA 58.102 29.630 0.00 0.00 36.36 3.53
2271 12751 9.715123 CAAAATTTAAAGTGAACCAAATTCCAC 57.285 29.630 0.00 0.00 36.36 4.02
2272 12752 8.445275 AAATTTAAAGTGAACCAAATTCCACC 57.555 30.769 0.00 0.00 36.36 4.61
2332 12812 5.105063 GGGCAAAATTAGATGAGTTTCTGC 58.895 41.667 0.00 0.00 0.00 4.26
2354 12834 4.752146 CCCAATTCAAATTTCAGAGGAGC 58.248 43.478 0.00 0.00 0.00 4.70
2364 12844 0.772124 TCAGAGGAGCCCAAACCCTT 60.772 55.000 0.00 0.00 0.00 3.95
2365 12845 0.113190 CAGAGGAGCCCAAACCCTTT 59.887 55.000 0.00 0.00 0.00 3.11
2366 12846 0.113190 AGAGGAGCCCAAACCCTTTG 59.887 55.000 0.00 0.00 40.32 2.77
2368 12848 2.650778 GAGCCCAAACCCTTTGCG 59.349 61.111 0.00 0.00 39.31 4.85
2371 12851 1.045911 AGCCCAAACCCTTTGCGAAA 61.046 50.000 0.00 0.00 39.31 3.46
2377 12857 4.816925 CCCAAACCCTTTGCGAAATAAAAA 59.183 37.500 0.00 0.00 39.31 1.94
2378 12858 5.277586 CCCAAACCCTTTGCGAAATAAAAAC 60.278 40.000 0.00 0.00 39.31 2.43
2379 12859 5.277586 CCAAACCCTTTGCGAAATAAAAACC 60.278 40.000 0.00 0.00 39.31 3.27
2380 12860 4.674281 ACCCTTTGCGAAATAAAAACCA 57.326 36.364 0.00 0.00 0.00 3.67
2381 12861 4.627058 ACCCTTTGCGAAATAAAAACCAG 58.373 39.130 0.00 0.00 0.00 4.00
2382 12862 3.993736 CCCTTTGCGAAATAAAAACCAGG 59.006 43.478 0.00 0.00 0.00 4.45
2383 12863 4.262249 CCCTTTGCGAAATAAAAACCAGGA 60.262 41.667 0.00 0.00 0.00 3.86
2384 12864 4.923281 CCTTTGCGAAATAAAAACCAGGAG 59.077 41.667 0.00 0.00 0.00 3.69
2385 12865 5.508994 CCTTTGCGAAATAAAAACCAGGAGT 60.509 40.000 0.00 0.00 0.00 3.85
2386 12866 5.523438 TTGCGAAATAAAAACCAGGAGTT 57.477 34.783 0.00 0.00 41.81 3.01
2387 12867 4.865776 TGCGAAATAAAAACCAGGAGTTG 58.134 39.130 0.00 0.00 39.19 3.16
2388 12868 4.339814 TGCGAAATAAAAACCAGGAGTTGT 59.660 37.500 0.00 0.00 39.19 3.32
2389 12869 5.531659 TGCGAAATAAAAACCAGGAGTTGTA 59.468 36.000 0.00 0.00 39.19 2.41
2390 12870 6.084277 GCGAAATAAAAACCAGGAGTTGTAG 58.916 40.000 0.00 0.00 39.19 2.74
2391 12871 6.293790 GCGAAATAAAAACCAGGAGTTGTAGT 60.294 38.462 0.00 0.00 39.19 2.73
2392 12872 7.095102 GCGAAATAAAAACCAGGAGTTGTAGTA 60.095 37.037 0.00 0.00 39.19 1.82
2393 12873 8.776470 CGAAATAAAAACCAGGAGTTGTAGTAA 58.224 33.333 0.00 0.00 39.19 2.24
2397 12877 5.996669 AAACCAGGAGTTGTAGTAAAACG 57.003 39.130 0.00 0.00 39.19 3.60
2398 12878 4.677673 ACCAGGAGTTGTAGTAAAACGT 57.322 40.909 0.00 0.00 32.65 3.99
2399 12879 5.789643 ACCAGGAGTTGTAGTAAAACGTA 57.210 39.130 0.00 0.00 32.65 3.57
2400 12880 6.350629 ACCAGGAGTTGTAGTAAAACGTAT 57.649 37.500 0.00 0.00 32.65 3.06
2401 12881 6.161381 ACCAGGAGTTGTAGTAAAACGTATG 58.839 40.000 0.00 0.00 32.65 2.39
2402 12882 6.015180 ACCAGGAGTTGTAGTAAAACGTATGA 60.015 38.462 0.00 0.00 32.65 2.15
2403 12883 7.039882 CCAGGAGTTGTAGTAAAACGTATGAT 58.960 38.462 0.00 0.00 32.65 2.45
2404 12884 7.010183 CCAGGAGTTGTAGTAAAACGTATGATG 59.990 40.741 0.00 0.00 32.65 3.07
2405 12885 7.544566 CAGGAGTTGTAGTAAAACGTATGATGT 59.455 37.037 0.00 0.00 32.65 3.06
2406 12886 7.758528 AGGAGTTGTAGTAAAACGTATGATGTC 59.241 37.037 0.00 0.00 32.65 3.06
2407 12887 7.253552 GGAGTTGTAGTAAAACGTATGATGTCG 60.254 40.741 0.00 0.00 32.65 4.35
2408 12888 7.086376 AGTTGTAGTAAAACGTATGATGTCGT 58.914 34.615 0.00 0.00 42.12 4.34
2409 12889 6.858104 TGTAGTAAAACGTATGATGTCGTG 57.142 37.500 0.00 0.00 40.19 4.35
2410 12890 4.835199 AGTAAAACGTATGATGTCGTGC 57.165 40.909 0.00 0.00 40.19 5.34
2411 12891 4.239304 AGTAAAACGTATGATGTCGTGCA 58.761 39.130 0.00 0.00 40.19 4.57
2412 12892 4.868171 AGTAAAACGTATGATGTCGTGCAT 59.132 37.500 0.00 0.00 40.19 3.96
2413 12893 3.656651 AAACGTATGATGTCGTGCATG 57.343 42.857 0.00 0.00 40.19 4.06
2414 12894 2.293677 ACGTATGATGTCGTGCATGT 57.706 45.000 5.68 0.00 38.06 3.21
2415 12895 2.616960 ACGTATGATGTCGTGCATGTT 58.383 42.857 5.68 0.00 38.06 2.71
2416 12896 2.348362 ACGTATGATGTCGTGCATGTTG 59.652 45.455 5.68 0.00 38.06 3.33
2417 12897 2.602660 CGTATGATGTCGTGCATGTTGA 59.397 45.455 5.68 0.00 38.06 3.18
2418 12898 3.061965 CGTATGATGTCGTGCATGTTGAA 59.938 43.478 5.68 0.00 38.06 2.69
2419 12899 2.967459 TGATGTCGTGCATGTTGAAC 57.033 45.000 5.68 0.00 38.06 3.18
2420 12900 1.535028 TGATGTCGTGCATGTTGAACC 59.465 47.619 5.68 0.00 38.06 3.62
2421 12901 0.881118 ATGTCGTGCATGTTGAACCC 59.119 50.000 5.68 0.00 36.26 4.11
2422 12902 0.464554 TGTCGTGCATGTTGAACCCA 60.465 50.000 5.68 0.00 0.00 4.51
2423 12903 0.238289 GTCGTGCATGTTGAACCCAG 59.762 55.000 5.68 0.00 0.00 4.45
2424 12904 0.107643 TCGTGCATGTTGAACCCAGA 59.892 50.000 5.68 0.00 0.00 3.86
2425 12905 0.518636 CGTGCATGTTGAACCCAGAG 59.481 55.000 0.00 0.00 0.00 3.35
2426 12906 0.883833 GTGCATGTTGAACCCAGAGG 59.116 55.000 0.00 0.00 40.04 3.69
2427 12907 0.895100 TGCATGTTGAACCCAGAGGC 60.895 55.000 0.00 0.00 36.11 4.70
2428 12908 1.598701 GCATGTTGAACCCAGAGGCC 61.599 60.000 0.00 0.00 36.11 5.19
2429 12909 0.251297 CATGTTGAACCCAGAGGCCA 60.251 55.000 5.01 0.00 36.11 5.36
2430 12910 0.706433 ATGTTGAACCCAGAGGCCAT 59.294 50.000 5.01 0.00 36.11 4.40
2431 12911 0.251297 TGTTGAACCCAGAGGCCATG 60.251 55.000 5.01 2.64 36.11 3.66
2432 12912 0.038166 GTTGAACCCAGAGGCCATGA 59.962 55.000 5.01 0.00 36.11 3.07
2433 12913 0.038166 TTGAACCCAGAGGCCATGAC 59.962 55.000 5.01 0.00 36.11 3.06
2434 12914 1.133181 TGAACCCAGAGGCCATGACA 61.133 55.000 5.01 0.00 36.11 3.58
2435 12915 0.257039 GAACCCAGAGGCCATGACAT 59.743 55.000 5.01 0.00 36.11 3.06
2436 12916 1.490490 GAACCCAGAGGCCATGACATA 59.510 52.381 5.01 0.00 36.11 2.29
2437 12917 1.825105 ACCCAGAGGCCATGACATAT 58.175 50.000 5.01 0.00 36.11 1.78
2438 12918 2.990195 ACCCAGAGGCCATGACATATA 58.010 47.619 5.01 0.00 36.11 0.86
2439 12919 3.535239 ACCCAGAGGCCATGACATATAT 58.465 45.455 5.01 0.00 36.11 0.86
2440 12920 3.265221 ACCCAGAGGCCATGACATATATG 59.735 47.826 11.29 11.29 36.11 1.78
2441 12921 3.371273 CCCAGAGGCCATGACATATATGG 60.371 52.174 16.96 2.34 46.28 2.74
2449 12929 5.874895 CCATGACATATATGGCTCTTGTG 57.125 43.478 19.35 9.89 38.73 3.33
2450 12930 4.155462 CCATGACATATATGGCTCTTGTGC 59.845 45.833 19.35 0.00 38.73 4.57
2458 12938 2.486966 GCTCTTGTGCCAATCCGC 59.513 61.111 0.00 0.00 0.00 5.54
2459 12939 2.787249 CTCTTGTGCCAATCCGCG 59.213 61.111 0.00 0.00 0.00 6.46
2460 12940 2.745884 TCTTGTGCCAATCCGCGG 60.746 61.111 22.12 22.12 0.00 6.46
2461 12941 2.745884 CTTGTGCCAATCCGCGGA 60.746 61.111 33.12 33.12 0.00 5.54
2462 12942 2.745884 TTGTGCCAATCCGCGGAG 60.746 61.111 33.87 20.95 0.00 4.63
2463 12943 3.545124 TTGTGCCAATCCGCGGAGT 62.545 57.895 33.87 29.53 0.00 3.85
2464 12944 2.173758 TTGTGCCAATCCGCGGAGTA 62.174 55.000 33.87 16.83 0.00 2.59
2465 12945 2.171725 GTGCCAATCCGCGGAGTAC 61.172 63.158 33.87 24.98 0.00 2.73
2466 12946 2.185867 GCCAATCCGCGGAGTACA 59.814 61.111 33.87 10.46 0.00 2.90
2467 12947 1.227556 GCCAATCCGCGGAGTACAT 60.228 57.895 33.87 13.86 0.00 2.29
2468 12948 0.814010 GCCAATCCGCGGAGTACATT 60.814 55.000 33.87 19.51 0.00 2.71
2469 12949 1.217882 CCAATCCGCGGAGTACATTC 58.782 55.000 33.87 0.00 0.00 2.67
2470 12950 0.852777 CAATCCGCGGAGTACATTCG 59.147 55.000 33.87 14.05 0.00 3.34
2471 12951 0.874607 AATCCGCGGAGTACATTCGC 60.875 55.000 33.87 14.55 45.15 4.70
2472 12952 2.694829 ATCCGCGGAGTACATTCGCC 62.695 60.000 33.87 1.58 45.74 5.54
2475 12955 2.279252 CGGAGTACATTCGCCGGG 60.279 66.667 2.18 0.00 44.57 5.73
2476 12956 2.777972 CGGAGTACATTCGCCGGGA 61.778 63.158 2.18 0.00 44.57 5.14
2477 12957 1.518774 GGAGTACATTCGCCGGGAA 59.481 57.895 2.18 5.62 39.42 3.97
2478 12958 0.108041 GGAGTACATTCGCCGGGAAA 60.108 55.000 2.18 0.00 38.36 3.13
2479 12959 1.676615 GGAGTACATTCGCCGGGAAAA 60.677 52.381 2.18 0.00 38.36 2.29
2480 12960 2.285977 GAGTACATTCGCCGGGAAAAT 58.714 47.619 2.18 0.83 38.36 1.82
2481 12961 2.014128 AGTACATTCGCCGGGAAAATG 58.986 47.619 15.98 15.98 38.36 2.32
2482 12962 0.736053 TACATTCGCCGGGAAAATGC 59.264 50.000 16.98 0.00 38.36 3.56
2483 12963 1.226945 CATTCGCCGGGAAAATGCC 60.227 57.895 2.18 0.00 38.36 4.40
2491 12971 3.739077 GGGAAAATGCCGACAATGG 57.261 52.632 0.00 0.00 0.00 3.16
2492 12972 0.894835 GGGAAAATGCCGACAATGGT 59.105 50.000 0.00 0.00 0.00 3.55
2493 12973 1.135112 GGGAAAATGCCGACAATGGTC 60.135 52.381 0.00 0.00 40.77 4.02
2494 12974 1.543802 GGAAAATGCCGACAATGGTCA 59.456 47.619 0.13 0.00 44.54 4.02
2495 12975 2.595386 GAAAATGCCGACAATGGTCAC 58.405 47.619 0.13 0.00 44.54 3.67
2496 12976 0.887933 AAATGCCGACAATGGTCACC 59.112 50.000 0.13 0.00 44.54 4.02
2497 12977 0.251121 AATGCCGACAATGGTCACCA 60.251 50.000 0.00 0.00 44.54 4.17
2498 12978 0.960364 ATGCCGACAATGGTCACCAC 60.960 55.000 0.00 0.00 44.54 4.16
2499 12979 1.302511 GCCGACAATGGTCACCACT 60.303 57.895 0.00 0.00 44.54 4.00
2500 12980 1.298859 GCCGACAATGGTCACCACTC 61.299 60.000 0.00 0.00 44.54 3.51
2501 12981 0.034756 CCGACAATGGTCACCACTCA 59.965 55.000 0.00 0.00 44.54 3.41
2502 12982 1.148310 CGACAATGGTCACCACTCAC 58.852 55.000 0.00 0.00 44.54 3.51
2503 12983 1.523758 GACAATGGTCACCACTCACC 58.476 55.000 0.00 0.00 43.73 4.02
2504 12984 0.843309 ACAATGGTCACCACTCACCA 59.157 50.000 0.00 0.00 46.84 4.17
2505 12985 1.238439 CAATGGTCACCACTCACCAC 58.762 55.000 0.00 0.00 45.61 4.16
2506 12986 0.110486 AATGGTCACCACTCACCACC 59.890 55.000 0.00 0.00 45.61 4.61
2507 12987 1.059584 ATGGTCACCACTCACCACCA 61.060 55.000 0.00 0.00 45.61 4.17
2508 12988 1.275421 TGGTCACCACTCACCACCAA 61.275 55.000 0.00 0.00 37.78 3.67
2509 12989 0.818040 GGTCACCACTCACCACCAAC 60.818 60.000 0.00 0.00 32.33 3.77
2510 12990 0.180406 GTCACCACTCACCACCAACT 59.820 55.000 0.00 0.00 0.00 3.16
2511 12991 1.414919 GTCACCACTCACCACCAACTA 59.585 52.381 0.00 0.00 0.00 2.24
2512 12992 2.038557 GTCACCACTCACCACCAACTAT 59.961 50.000 0.00 0.00 0.00 2.12
2513 12993 3.259876 GTCACCACTCACCACCAACTATA 59.740 47.826 0.00 0.00 0.00 1.31
2514 12994 3.259876 TCACCACTCACCACCAACTATAC 59.740 47.826 0.00 0.00 0.00 1.47
2515 12995 2.570302 ACCACTCACCACCAACTATACC 59.430 50.000 0.00 0.00 0.00 2.73
2516 12996 2.838202 CCACTCACCACCAACTATACCT 59.162 50.000 0.00 0.00 0.00 3.08
2517 12997 3.369471 CCACTCACCACCAACTATACCTG 60.369 52.174 0.00 0.00 0.00 4.00
2518 12998 2.838202 ACTCACCACCAACTATACCTGG 59.162 50.000 0.00 0.00 38.77 4.45
2519 12999 1.557832 TCACCACCAACTATACCTGGC 59.442 52.381 0.00 0.00 36.03 4.85
2520 13000 0.916809 ACCACCAACTATACCTGGCC 59.083 55.000 0.00 0.00 36.03 5.36
2521 13001 0.916086 CCACCAACTATACCTGGCCA 59.084 55.000 4.71 4.71 36.03 5.36
2522 13002 1.408266 CCACCAACTATACCTGGCCAC 60.408 57.143 0.00 0.00 36.03 5.01
2523 13003 0.539986 ACCAACTATACCTGGCCACG 59.460 55.000 0.00 0.00 36.03 4.94
2524 13004 0.179056 CCAACTATACCTGGCCACGG 60.179 60.000 16.92 16.92 0.00 4.94
2526 13006 0.325860 AACTATACCTGGCCACGGGA 60.326 55.000 17.65 12.89 46.80 5.14
2527 13007 0.105142 ACTATACCTGGCCACGGGAT 60.105 55.000 17.65 18.59 46.80 3.85
2528 13008 1.148446 ACTATACCTGGCCACGGGATA 59.852 52.381 17.65 18.71 46.80 2.59
2529 13009 1.549170 CTATACCTGGCCACGGGATAC 59.451 57.143 17.65 0.00 46.80 2.24
2572 13052 4.636435 CGGTCTTGCCCGTGGGTT 62.636 66.667 6.82 0.00 43.07 4.11
2573 13053 2.983592 GGTCTTGCCCGTGGGTTG 60.984 66.667 6.82 0.00 37.65 3.77
2574 13054 2.983592 GTCTTGCCCGTGGGTTGG 60.984 66.667 6.82 0.00 37.65 3.77
2594 13074 2.967599 GCCTGGGCCTAAAATTTGAG 57.032 50.000 4.53 0.00 34.56 3.02
2595 13075 1.134699 GCCTGGGCCTAAAATTTGAGC 60.135 52.381 4.53 0.00 34.56 4.26
2596 13076 1.482182 CCTGGGCCTAAAATTTGAGCC 59.518 52.381 14.89 14.89 43.09 4.70
2599 13079 1.470051 GGCCTAAAATTTGAGCCCGA 58.530 50.000 13.02 0.00 37.66 5.14
2600 13080 1.822371 GGCCTAAAATTTGAGCCCGAA 59.178 47.619 13.02 0.00 37.66 4.30
2601 13081 2.159240 GGCCTAAAATTTGAGCCCGAAG 60.159 50.000 13.02 0.00 37.66 3.79
2615 13095 4.678743 GAAGGTTGGGCCGGGCTT 62.679 66.667 28.80 13.96 43.70 4.35
2616 13096 4.994756 AAGGTTGGGCCGGGCTTG 62.995 66.667 28.80 0.00 43.70 4.01
2625 13105 4.351054 CCGGGCTTGGGCTTGACT 62.351 66.667 0.00 0.00 38.73 3.41
2626 13106 2.282462 CGGGCTTGGGCTTGACTT 60.282 61.111 0.00 0.00 38.73 3.01
2627 13107 1.903404 CGGGCTTGGGCTTGACTTT 60.903 57.895 0.00 0.00 38.73 2.66
2628 13108 1.463553 CGGGCTTGGGCTTGACTTTT 61.464 55.000 0.00 0.00 38.73 2.27
2629 13109 0.758734 GGGCTTGGGCTTGACTTTTT 59.241 50.000 0.00 0.00 38.73 1.94
2649 13129 4.823790 TTTGCGTTTTAGGAAAGAGACC 57.176 40.909 0.00 0.00 0.00 3.85
2650 13130 3.764237 TGCGTTTTAGGAAAGAGACCT 57.236 42.857 0.00 0.00 41.05 3.85
2651 13131 3.399330 TGCGTTTTAGGAAAGAGACCTG 58.601 45.455 0.00 0.00 38.31 4.00
2652 13132 3.070446 TGCGTTTTAGGAAAGAGACCTGA 59.930 43.478 0.00 0.00 38.31 3.86
2653 13133 3.680458 GCGTTTTAGGAAAGAGACCTGAG 59.320 47.826 0.00 0.00 38.31 3.35
2654 13134 4.246458 CGTTTTAGGAAAGAGACCTGAGG 58.754 47.826 0.00 0.00 38.31 3.86
2655 13135 3.983044 TTTAGGAAAGAGACCTGAGGC 57.017 47.619 0.00 0.00 38.31 4.70
2656 13136 2.930109 TAGGAAAGAGACCTGAGGCT 57.070 50.000 0.00 0.00 38.31 4.58
2657 13137 2.930109 AGGAAAGAGACCTGAGGCTA 57.070 50.000 0.00 0.00 36.30 3.93
2658 13138 2.745968 AGGAAAGAGACCTGAGGCTAG 58.254 52.381 0.00 0.00 36.30 3.42
2659 13139 2.313342 AGGAAAGAGACCTGAGGCTAGA 59.687 50.000 0.00 0.00 36.30 2.43
2660 13140 3.052186 AGGAAAGAGACCTGAGGCTAGAT 60.052 47.826 0.00 0.00 36.30 1.98
2661 13141 3.069443 GGAAAGAGACCTGAGGCTAGATG 59.931 52.174 0.00 0.00 0.00 2.90
2662 13142 2.380064 AGAGACCTGAGGCTAGATGG 57.620 55.000 0.00 0.00 0.00 3.51
2663 13143 1.133199 AGAGACCTGAGGCTAGATGGG 60.133 57.143 0.00 0.00 0.00 4.00
2664 13144 0.762461 AGACCTGAGGCTAGATGGGC 60.762 60.000 0.00 0.00 0.00 5.36
2665 13145 0.762461 GACCTGAGGCTAGATGGGCT 60.762 60.000 0.00 0.00 44.87 5.19
2666 13146 1.053264 ACCTGAGGCTAGATGGGCTG 61.053 60.000 0.00 0.00 42.23 4.85
2667 13147 0.762082 CCTGAGGCTAGATGGGCTGA 60.762 60.000 0.00 0.00 42.23 4.26
2668 13148 0.680618 CTGAGGCTAGATGGGCTGAG 59.319 60.000 0.00 0.00 42.23 3.35
2669 13149 1.370810 GAGGCTAGATGGGCTGAGC 59.629 63.158 0.00 0.00 42.23 4.26
2670 13150 1.383664 AGGCTAGATGGGCTGAGCA 60.384 57.895 6.82 0.00 40.64 4.26
2671 13151 0.767446 AGGCTAGATGGGCTGAGCAT 60.767 55.000 6.82 0.00 40.64 3.79
2672 13152 0.605860 GGCTAGATGGGCTGAGCATG 60.606 60.000 6.82 0.00 36.63 4.06
2673 13153 0.605860 GCTAGATGGGCTGAGCATGG 60.606 60.000 6.82 0.00 34.96 3.66
2674 13154 0.036448 CTAGATGGGCTGAGCATGGG 59.964 60.000 6.82 0.00 0.00 4.00
2675 13155 2.060567 TAGATGGGCTGAGCATGGGC 62.061 60.000 6.82 0.00 41.61 5.36
2676 13156 4.534824 ATGGGCTGAGCATGGGCC 62.535 66.667 6.82 0.00 46.56 5.80
2679 13159 4.119363 GGCTGAGCATGGGCCTGA 62.119 66.667 6.82 0.00 42.31 3.86
2680 13160 2.044650 GCTGAGCATGGGCCTGAA 60.045 61.111 4.53 0.00 42.56 3.02
2681 13161 1.679977 GCTGAGCATGGGCCTGAAA 60.680 57.895 4.53 0.00 42.56 2.69
2682 13162 1.041447 GCTGAGCATGGGCCTGAAAT 61.041 55.000 4.53 0.00 42.56 2.17
2683 13163 1.030457 CTGAGCATGGGCCTGAAATC 58.970 55.000 4.53 0.00 42.56 2.17
2684 13164 0.627451 TGAGCATGGGCCTGAAATCT 59.373 50.000 4.53 0.00 42.56 2.40
2685 13165 1.845791 TGAGCATGGGCCTGAAATCTA 59.154 47.619 4.53 0.00 42.56 1.98
2686 13166 2.158711 TGAGCATGGGCCTGAAATCTAG 60.159 50.000 4.53 0.00 42.56 2.43
2687 13167 1.144503 AGCATGGGCCTGAAATCTAGG 59.855 52.381 4.53 0.00 42.56 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.322057 ACACCCTGCCATCTTCTTTAAT 57.678 40.909 0.00 0.00 0.00 1.40
2 3 3.806949 ACACCCTGCCATCTTCTTTAA 57.193 42.857 0.00 0.00 0.00 1.52
3 4 3.806949 AACACCCTGCCATCTTCTTTA 57.193 42.857 0.00 0.00 0.00 1.85
5 6 2.108952 AGAAACACCCTGCCATCTTCTT 59.891 45.455 0.00 0.00 0.00 2.52
6 7 1.707427 AGAAACACCCTGCCATCTTCT 59.293 47.619 0.00 0.00 0.00 2.85
7 8 2.206576 AGAAACACCCTGCCATCTTC 57.793 50.000 0.00 0.00 0.00 2.87
9 10 1.915141 CAAGAAACACCCTGCCATCT 58.085 50.000 0.00 0.00 0.00 2.90
10 11 0.244721 GCAAGAAACACCCTGCCATC 59.755 55.000 0.00 0.00 0.00 3.51
11 12 0.469705 TGCAAGAAACACCCTGCCAT 60.470 50.000 0.00 0.00 0.00 4.40
12 13 0.685785 TTGCAAGAAACACCCTGCCA 60.686 50.000 0.00 0.00 0.00 4.92
13 14 0.463620 TTTGCAAGAAACACCCTGCC 59.536 50.000 0.00 0.00 0.00 4.85
14 15 2.307934 TTTTGCAAGAAACACCCTGC 57.692 45.000 0.00 0.00 0.00 4.85
16 17 3.205338 GCATTTTTGCAAGAAACACCCT 58.795 40.909 6.49 0.00 34.41 4.34
17 18 2.032979 CGCATTTTTGCAAGAAACACCC 60.033 45.455 6.49 0.00 34.41 4.61
19 20 2.032979 CCCGCATTTTTGCAAGAAACAC 60.033 45.455 6.49 0.00 34.41 3.32
21 22 1.069973 GCCCGCATTTTTGCAAGAAAC 60.070 47.619 6.49 1.68 34.41 2.78
22 23 1.224965 GCCCGCATTTTTGCAAGAAA 58.775 45.000 6.49 7.71 34.41 2.52
23 24 0.943359 CGCCCGCATTTTTGCAAGAA 60.943 50.000 4.71 4.71 34.41 2.52
25 26 0.943359 TTCGCCCGCATTTTTGCAAG 60.943 50.000 0.00 0.00 34.41 4.01
26 27 0.943359 CTTCGCCCGCATTTTTGCAA 60.943 50.000 0.00 0.00 34.41 4.08
29 30 0.732538 GGTCTTCGCCCGCATTTTTG 60.733 55.000 0.00 0.00 0.00 2.44
30 31 1.584495 GGTCTTCGCCCGCATTTTT 59.416 52.632 0.00 0.00 0.00 1.94
31 32 2.686816 CGGTCTTCGCCCGCATTTT 61.687 57.895 0.00 0.00 38.85 1.82
38 39 4.452733 CTGGACCGGTCTTCGCCC 62.453 72.222 32.52 17.26 37.59 6.13
41 42 3.691342 TGGCTGGACCGGTCTTCG 61.691 66.667 32.52 21.15 43.94 3.79
42 43 2.047179 GTGGCTGGACCGGTCTTC 60.047 66.667 32.52 20.65 43.94 2.87
43 44 3.637273 GGTGGCTGGACCGGTCTT 61.637 66.667 32.52 0.00 43.94 3.01
44 45 4.640690 AGGTGGCTGGACCGGTCT 62.641 66.667 32.52 8.80 43.94 3.85
45 46 4.394712 CAGGTGGCTGGACCGGTC 62.395 72.222 27.04 27.04 43.94 4.79
57 58 2.203394 ACAAGTGGCAGCCAGGTG 60.203 61.111 16.83 18.20 32.34 4.00
58 59 2.113986 GACAAGTGGCAGCCAGGT 59.886 61.111 16.83 13.96 32.34 4.00
59 60 3.052082 CGACAAGTGGCAGCCAGG 61.052 66.667 16.83 10.40 32.34 4.45
60 61 2.031012 TCGACAAGTGGCAGCCAG 59.969 61.111 16.83 5.91 32.34 4.85
62 63 3.426568 GCTCGACAAGTGGCAGCC 61.427 66.667 3.66 3.66 0.00 4.85
63 64 2.358003 AGCTCGACAAGTGGCAGC 60.358 61.111 0.00 1.66 0.00 5.25
65 66 1.595109 CACAGCTCGACAAGTGGCA 60.595 57.895 0.00 0.00 0.00 4.92
66 67 0.671781 ATCACAGCTCGACAAGTGGC 60.672 55.000 6.55 0.00 33.01 5.01
67 68 2.534298 CTATCACAGCTCGACAAGTGG 58.466 52.381 6.55 0.00 33.01 4.00
68 69 2.534298 CCTATCACAGCTCGACAAGTG 58.466 52.381 0.00 0.00 0.00 3.16
69 70 1.134965 GCCTATCACAGCTCGACAAGT 60.135 52.381 0.00 0.00 0.00 3.16
70 71 1.565305 GCCTATCACAGCTCGACAAG 58.435 55.000 0.00 0.00 0.00 3.16
71 72 0.175760 GGCCTATCACAGCTCGACAA 59.824 55.000 0.00 0.00 0.00 3.18
72 73 1.816537 GGCCTATCACAGCTCGACA 59.183 57.895 0.00 0.00 0.00 4.35
73 74 1.299468 CGGCCTATCACAGCTCGAC 60.299 63.158 0.00 0.00 0.00 4.20
74 75 2.490148 CCGGCCTATCACAGCTCGA 61.490 63.158 0.00 0.00 0.00 4.04
75 76 2.028190 CCGGCCTATCACAGCTCG 59.972 66.667 0.00 0.00 0.00 5.03
76 77 1.109920 TCTCCGGCCTATCACAGCTC 61.110 60.000 0.00 0.00 0.00 4.09
77 78 1.075970 TCTCCGGCCTATCACAGCT 60.076 57.895 0.00 0.00 0.00 4.24
78 79 1.068250 GTCTCCGGCCTATCACAGC 59.932 63.158 0.00 0.00 0.00 4.40
79 80 1.982660 TAGTCTCCGGCCTATCACAG 58.017 55.000 0.00 0.00 0.00 3.66
80 81 2.447408 TTAGTCTCCGGCCTATCACA 57.553 50.000 0.00 0.00 0.00 3.58
81 82 3.321111 TGATTTAGTCTCCGGCCTATCAC 59.679 47.826 0.00 0.00 0.00 3.06
82 83 3.572642 TGATTTAGTCTCCGGCCTATCA 58.427 45.455 0.00 0.00 0.00 2.15
83 84 4.220821 TGATGATTTAGTCTCCGGCCTATC 59.779 45.833 0.00 0.00 0.00 2.08
85 86 3.321111 GTGATGATTTAGTCTCCGGCCTA 59.679 47.826 0.00 0.00 0.00 3.93
87 88 2.158957 TGTGATGATTTAGTCTCCGGCC 60.159 50.000 0.00 0.00 0.00 6.13
88 89 3.179443 TGTGATGATTTAGTCTCCGGC 57.821 47.619 0.00 0.00 0.00 6.13
89 90 4.202253 TGGATGTGATGATTTAGTCTCCGG 60.202 45.833 0.00 0.00 0.00 5.14
90 91 4.948847 TGGATGTGATGATTTAGTCTCCG 58.051 43.478 0.00 0.00 0.00 4.63
108 109 1.072266 TACCCCAACTTGCACTGGAT 58.928 50.000 9.73 1.76 34.35 3.41
110 111 1.176527 CATACCCCAACTTGCACTGG 58.823 55.000 2.25 2.25 0.00 4.00
111 112 1.176527 CCATACCCCAACTTGCACTG 58.823 55.000 0.00 0.00 0.00 3.66
112 113 0.777446 ACCATACCCCAACTTGCACT 59.223 50.000 0.00 0.00 0.00 4.40
113 114 0.887933 CACCATACCCCAACTTGCAC 59.112 55.000 0.00 0.00 0.00 4.57
115 116 0.039035 TCCACCATACCCCAACTTGC 59.961 55.000 0.00 0.00 0.00 4.01
116 117 1.354368 ACTCCACCATACCCCAACTTG 59.646 52.381 0.00 0.00 0.00 3.16
118 119 1.354368 CAACTCCACCATACCCCAACT 59.646 52.381 0.00 0.00 0.00 3.16
119 120 1.834188 CAACTCCACCATACCCCAAC 58.166 55.000 0.00 0.00 0.00 3.77
120 121 0.039035 GCAACTCCACCATACCCCAA 59.961 55.000 0.00 0.00 0.00 4.12
121 122 1.136961 TGCAACTCCACCATACCCCA 61.137 55.000 0.00 0.00 0.00 4.96
122 123 0.258774 ATGCAACTCCACCATACCCC 59.741 55.000 0.00 0.00 0.00 4.95
123 124 2.143876 AATGCAACTCCACCATACCC 57.856 50.000 0.00 0.00 0.00 3.69
125 126 3.253230 GCAAAATGCAACTCCACCATAC 58.747 45.455 0.00 0.00 44.26 2.39
127 128 2.460757 GCAAAATGCAACTCCACCAT 57.539 45.000 0.00 0.00 44.26 3.55
138 139 6.836577 TTTAGTACCAAACTTGCAAAATGC 57.163 33.333 0.00 0.00 40.89 3.56
139 140 8.586570 TGATTTAGTACCAAACTTGCAAAATG 57.413 30.769 0.00 0.00 39.80 2.32
140 141 9.423061 GATGATTTAGTACCAAACTTGCAAAAT 57.577 29.630 0.00 0.00 39.80 1.82
141 142 8.417106 TGATGATTTAGTACCAAACTTGCAAAA 58.583 29.630 0.00 0.00 39.80 2.44
142 143 7.865385 GTGATGATTTAGTACCAAACTTGCAAA 59.135 33.333 0.00 0.00 39.80 3.68
143 144 7.013750 TGTGATGATTTAGTACCAAACTTGCAA 59.986 33.333 0.00 0.00 39.80 4.08
144 145 6.488344 TGTGATGATTTAGTACCAAACTTGCA 59.512 34.615 0.00 0.00 39.80 4.08
145 146 6.908825 TGTGATGATTTAGTACCAAACTTGC 58.091 36.000 0.00 0.00 39.80 4.01
148 149 9.295825 TGAAATGTGATGATTTAGTACCAAACT 57.704 29.630 0.00 0.00 42.62 2.66
160 161 8.906867 CCCTAACTTGTATGAAATGTGATGATT 58.093 33.333 0.00 0.00 0.00 2.57
161 162 8.055181 ACCCTAACTTGTATGAAATGTGATGAT 58.945 33.333 0.00 0.00 0.00 2.45
162 163 7.402054 ACCCTAACTTGTATGAAATGTGATGA 58.598 34.615 0.00 0.00 0.00 2.92
163 164 7.630242 ACCCTAACTTGTATGAAATGTGATG 57.370 36.000 0.00 0.00 0.00 3.07
164 165 8.548877 AGTACCCTAACTTGTATGAAATGTGAT 58.451 33.333 0.00 0.00 0.00 3.06
165 166 7.913789 AGTACCCTAACTTGTATGAAATGTGA 58.086 34.615 0.00 0.00 0.00 3.58
166 167 8.561738 AAGTACCCTAACTTGTATGAAATGTG 57.438 34.615 0.00 0.00 38.28 3.21
179 180 0.989602 GCACCCCAAGTACCCTAACT 59.010 55.000 0.00 0.00 0.00 2.24
180 181 0.989602 AGCACCCCAAGTACCCTAAC 59.010 55.000 0.00 0.00 0.00 2.34
182 183 1.750022 AAAGCACCCCAAGTACCCTA 58.250 50.000 0.00 0.00 0.00 3.53
183 184 0.857675 AAAAGCACCCCAAGTACCCT 59.142 50.000 0.00 0.00 0.00 4.34
184 185 2.165167 GTAAAAGCACCCCAAGTACCC 58.835 52.381 0.00 0.00 0.00 3.69
185 186 2.165167 GGTAAAAGCACCCCAAGTACC 58.835 52.381 0.00 0.00 31.91 3.34
186 187 3.079578 GAGGTAAAAGCACCCCAAGTAC 58.920 50.000 0.00 0.00 39.62 2.73
188 189 1.780919 AGAGGTAAAAGCACCCCAAGT 59.219 47.619 0.00 0.00 39.62 3.16
189 190 2.040412 AGAGAGGTAAAAGCACCCCAAG 59.960 50.000 0.00 0.00 39.62 3.61
190 191 2.062636 AGAGAGGTAAAAGCACCCCAA 58.937 47.619 0.00 0.00 39.62 4.12
191 192 1.742308 AGAGAGGTAAAAGCACCCCA 58.258 50.000 0.00 0.00 39.62 4.96
192 193 2.881111 AAGAGAGGTAAAAGCACCCC 57.119 50.000 0.00 0.00 39.62 4.95
225 226 4.944619 TGTATCTCATGGAGCAACCTAG 57.055 45.455 0.00 0.00 39.86 3.02
229 230 3.065925 GCCTTTGTATCTCATGGAGCAAC 59.934 47.826 0.00 0.00 0.00 4.17
231 232 2.507058 AGCCTTTGTATCTCATGGAGCA 59.493 45.455 0.00 0.00 0.00 4.26
234 235 3.135348 CCTCAGCCTTTGTATCTCATGGA 59.865 47.826 0.00 0.00 0.00 3.41
236 237 2.877168 GCCTCAGCCTTTGTATCTCATG 59.123 50.000 0.00 0.00 0.00 3.07
241 245 2.024176 TTCGCCTCAGCCTTTGTATC 57.976 50.000 0.00 0.00 34.57 2.24
247 251 1.448540 CGTCATTCGCCTCAGCCTT 60.449 57.895 0.00 0.00 34.57 4.35
261 265 6.127842 ACCTTTTACTTTTTGAGCTTTCGTCA 60.128 34.615 0.00 0.00 0.00 4.35
262 266 6.196538 CACCTTTTACTTTTTGAGCTTTCGTC 59.803 38.462 0.00 0.00 0.00 4.20
263 267 6.033966 CACCTTTTACTTTTTGAGCTTTCGT 58.966 36.000 0.00 0.00 0.00 3.85
353 6957 1.338337 CGTGTATGCCTCAGTCCTAGG 59.662 57.143 0.82 0.82 37.17 3.02
355 6959 0.744874 GCGTGTATGCCTCAGTCCTA 59.255 55.000 0.00 0.00 0.00 2.94
375 6979 1.741993 CTCTTTTTGTTGGCACGTCG 58.258 50.000 0.00 0.00 0.00 5.12
386 6990 2.028839 TGGACATGCATGGCTCTTTTTG 60.029 45.455 30.93 3.62 35.67 2.44
442 7050 2.673368 GTCGTGCTACAAGATTTGGGAG 59.327 50.000 0.00 0.00 34.12 4.30
447 7055 3.997021 CTCAAGGTCGTGCTACAAGATTT 59.003 43.478 0.00 0.00 0.00 2.17
480 7088 2.474410 ATTTGGACCTCTCCGTTCAC 57.526 50.000 0.00 0.00 39.88 3.18
511 7119 9.482627 CTGTACTAATGAAGAAGGGATTACATC 57.517 37.037 0.00 0.00 0.00 3.06
722 7337 1.200252 GAACTCGACACTGCTAGCTGA 59.800 52.381 26.29 8.91 0.00 4.26
729 7344 0.109272 TCGGATGAACTCGACACTGC 60.109 55.000 0.00 0.00 0.00 4.40
768 7384 2.746362 CCACTGCTTTTCCAGAGATGTC 59.254 50.000 0.00 0.00 36.67 3.06
870 10826 0.871722 CGGATGCTTTGTTGGACGAA 59.128 50.000 0.00 0.00 0.00 3.85
955 10913 3.868200 AACTGGCCGGGCTTTCTGG 62.868 63.158 29.87 13.62 44.90 3.86
958 10916 2.282180 TGAACTGGCCGGGCTTTC 60.282 61.111 29.87 27.60 0.00 2.62
1024 10986 2.004489 GCGCGGACGATAACGAGAG 61.004 63.158 8.83 0.00 43.93 3.20
1376 11359 1.002366 CACTTCAGTATGTCGCTGGC 58.998 55.000 0.00 0.00 37.40 4.85
1377 11360 1.204704 TCCACTTCAGTATGTCGCTGG 59.795 52.381 0.00 0.00 37.40 4.85
1378 11361 2.094494 ACTCCACTTCAGTATGTCGCTG 60.094 50.000 0.00 0.00 37.40 5.18
1379 11362 2.094494 CACTCCACTTCAGTATGTCGCT 60.094 50.000 0.00 0.00 37.40 4.93
1380 11363 2.094700 TCACTCCACTTCAGTATGTCGC 60.095 50.000 0.00 0.00 37.40 5.19
1381 11364 3.440522 TCTCACTCCACTTCAGTATGTCG 59.559 47.826 0.00 0.00 37.40 4.35
1383 11366 4.219507 CACTCTCACTCCACTTCAGTATGT 59.780 45.833 0.00 0.00 37.40 2.29
1384 11367 4.460731 TCACTCTCACTCCACTTCAGTATG 59.539 45.833 0.00 0.00 37.54 2.39
1385 11368 4.461081 GTCACTCTCACTCCACTTCAGTAT 59.539 45.833 0.00 0.00 0.00 2.12
1386 11369 3.821600 GTCACTCTCACTCCACTTCAGTA 59.178 47.826 0.00 0.00 0.00 2.74
1387 11370 2.625790 GTCACTCTCACTCCACTTCAGT 59.374 50.000 0.00 0.00 0.00 3.41
1388 11371 2.890311 AGTCACTCTCACTCCACTTCAG 59.110 50.000 0.00 0.00 0.00 3.02
1389 11372 2.950781 AGTCACTCTCACTCCACTTCA 58.049 47.619 0.00 0.00 0.00 3.02
1390 11373 4.321378 GGTTAGTCACTCTCACTCCACTTC 60.321 50.000 0.00 0.00 0.00 3.01
1391 11374 3.574826 GGTTAGTCACTCTCACTCCACTT 59.425 47.826 0.00 0.00 0.00 3.16
1392 11375 3.158676 GGTTAGTCACTCTCACTCCACT 58.841 50.000 0.00 0.00 0.00 4.00
1393 11376 2.891580 TGGTTAGTCACTCTCACTCCAC 59.108 50.000 0.00 0.00 0.00 4.02
1399 11395 4.215908 ACAGAAGTGGTTAGTCACTCTCA 58.784 43.478 0.00 0.00 46.17 3.27
1402 11398 3.495001 GCAACAGAAGTGGTTAGTCACTC 59.505 47.826 0.00 0.00 46.17 3.51
1424 11420 0.097499 CTGCACACACACACACACAG 59.903 55.000 0.00 0.00 0.00 3.66
1431 11427 1.078567 TCACAGCTGCACACACACA 60.079 52.632 15.27 0.00 0.00 3.72
1488 11496 0.249398 GCATCAGTAGGTGTTCCCGT 59.751 55.000 0.00 0.00 38.74 5.28
1493 11501 0.391661 CCGCAGCATCAGTAGGTGTT 60.392 55.000 0.00 0.00 36.87 3.32
1607 11615 3.259425 CTTGCACTCAACGGCAGCC 62.259 63.158 0.00 0.00 41.68 4.85
1610 11618 2.594303 CCCTTGCACTCAACGGCA 60.594 61.111 0.00 0.00 38.46 5.69
1611 11619 3.365265 CCCCTTGCACTCAACGGC 61.365 66.667 0.00 0.00 30.15 5.68
1612 11620 1.966451 GTCCCCTTGCACTCAACGG 60.966 63.158 0.00 0.00 0.00 4.44
1613 11621 1.966451 GGTCCCCTTGCACTCAACG 60.966 63.158 0.00 0.00 0.00 4.10
1614 11622 0.606673 GAGGTCCCCTTGCACTCAAC 60.607 60.000 0.00 0.00 31.76 3.18
1615 11623 1.761174 GAGGTCCCCTTGCACTCAA 59.239 57.895 0.00 0.00 31.76 3.02
1616 11624 2.224159 GGAGGTCCCCTTGCACTCA 61.224 63.158 0.00 0.00 31.76 3.41
1681 11698 6.396829 TCACATGACGATATCAGAGAACAT 57.603 37.500 0.00 0.00 41.91 2.71
1686 11703 5.862860 CAGGAATCACATGACGATATCAGAG 59.137 44.000 0.00 0.00 41.91 3.35
1693 11710 1.959042 GGCAGGAATCACATGACGAT 58.041 50.000 0.00 0.00 31.40 3.73
1730 11747 2.614520 ACATCCATCTAGTCGAGTCACG 59.385 50.000 0.00 0.00 44.09 4.35
1740 11757 0.602106 CAGGCGGCACATCCATCTAG 60.602 60.000 13.08 0.00 34.01 2.43
1766 11783 4.142945 GCAAATCAGTGACAGACTCATCAC 60.143 45.833 0.00 7.93 44.64 3.06
1767 11784 3.999001 GCAAATCAGTGACAGACTCATCA 59.001 43.478 0.00 0.00 29.75 3.07
1769 11786 4.252073 GAGCAAATCAGTGACAGACTCAT 58.748 43.478 0.00 0.00 29.75 2.90
1806 11831 4.823790 ACCGATAAAAACAAGTCACACC 57.176 40.909 0.00 0.00 0.00 4.16
1824 11849 4.454504 GTGCACTGGGGATAATAATAACCG 59.545 45.833 10.32 0.00 0.00 4.44
1842 11871 0.657840 GTGACAACTCTGGTGTGCAC 59.342 55.000 10.75 10.75 0.00 4.57
1849 11878 1.134098 ACCACCAAGTGACAACTCTGG 60.134 52.381 0.00 0.00 39.01 3.86
1881 11910 5.105473 TCCTCGTTACAAAAGCTAGCACTAT 60.105 40.000 18.83 0.44 0.00 2.12
1923 11952 1.009389 CGTGAGACGTTGGAGGAAGC 61.009 60.000 0.00 0.00 36.74 3.86
1924 11953 0.388649 CCGTGAGACGTTGGAGGAAG 60.389 60.000 0.00 0.00 40.58 3.46
2100 12400 0.881796 TTTCCGCACACACACACAAA 59.118 45.000 0.00 0.00 0.00 2.83
2101 12401 1.098869 ATTTCCGCACACACACACAA 58.901 45.000 0.00 0.00 0.00 3.33
2102 12402 1.870402 CTATTTCCGCACACACACACA 59.130 47.619 0.00 0.00 0.00 3.72
2103 12403 1.871039 ACTATTTCCGCACACACACAC 59.129 47.619 0.00 0.00 0.00 3.82
2104 12404 2.248280 ACTATTTCCGCACACACACA 57.752 45.000 0.00 0.00 0.00 3.72
2105 12405 3.619233 AAACTATTTCCGCACACACAC 57.381 42.857 0.00 0.00 0.00 3.82
2106 12406 4.127907 TGTAAACTATTTCCGCACACACA 58.872 39.130 0.00 0.00 0.00 3.72
2107 12407 4.735662 TGTAAACTATTTCCGCACACAC 57.264 40.909 0.00 0.00 0.00 3.82
2108 12408 5.703592 AGATTGTAAACTATTTCCGCACACA 59.296 36.000 0.00 0.00 0.00 3.72
2109 12409 6.178239 AGATTGTAAACTATTTCCGCACAC 57.822 37.500 0.00 0.00 0.00 3.82
2110 12410 6.811253 AAGATTGTAAACTATTTCCGCACA 57.189 33.333 0.00 0.00 0.00 4.57
2111 12411 7.270579 GTCAAAGATTGTAAACTATTTCCGCAC 59.729 37.037 0.00 0.00 0.00 5.34
2112 12412 7.174253 AGTCAAAGATTGTAAACTATTTCCGCA 59.826 33.333 0.00 0.00 0.00 5.69
2113 12413 7.527457 AGTCAAAGATTGTAAACTATTTCCGC 58.473 34.615 0.00 0.00 0.00 5.54
2123 12423 9.730420 GCTTTGTCTTAAGTCAAAGATTGTAAA 57.270 29.630 37.35 14.62 46.54 2.01
2124 12424 9.120538 AGCTTTGTCTTAAGTCAAAGATTGTAA 57.879 29.630 37.35 15.15 46.54 2.41
2125 12425 8.677148 AGCTTTGTCTTAAGTCAAAGATTGTA 57.323 30.769 37.35 15.69 46.54 2.41
2126 12426 7.573968 AGCTTTGTCTTAAGTCAAAGATTGT 57.426 32.000 37.35 23.92 46.54 2.71
2133 12433 8.946085 CCACATATTAGCTTTGTCTTAAGTCAA 58.054 33.333 10.54 10.54 0.00 3.18
2134 12434 8.318412 TCCACATATTAGCTTTGTCTTAAGTCA 58.682 33.333 1.63 0.00 0.00 3.41
2135 12435 8.718102 TCCACATATTAGCTTTGTCTTAAGTC 57.282 34.615 1.63 0.00 0.00 3.01
2179 12479 9.533831 AGGTGTCTTTCCATCTGTTTTTATATT 57.466 29.630 0.00 0.00 0.00 1.28
2243 12723 9.114952 GGAATTTGGTTCACTTTAAATTTTGGA 57.885 29.630 0.00 0.00 38.64 3.53
2244 12724 8.897752 TGGAATTTGGTTCACTTTAAATTTTGG 58.102 29.630 0.00 0.00 38.64 3.28
2250 12730 5.360144 TCGGTGGAATTTGGTTCACTTTAAA 59.640 36.000 0.00 0.00 38.64 1.52
2261 12741 1.904287 TCAGGTTCGGTGGAATTTGG 58.096 50.000 0.00 0.00 34.05 3.28
2268 12748 2.076863 GTTCAGATTCAGGTTCGGTGG 58.923 52.381 0.00 0.00 0.00 4.61
2269 12749 3.045601 AGTTCAGATTCAGGTTCGGTG 57.954 47.619 0.00 0.00 0.00 4.94
2270 12750 3.195825 CCTAGTTCAGATTCAGGTTCGGT 59.804 47.826 0.00 0.00 0.00 4.69
2271 12751 3.195825 ACCTAGTTCAGATTCAGGTTCGG 59.804 47.826 0.00 0.00 36.16 4.30
2272 12752 4.457834 ACCTAGTTCAGATTCAGGTTCG 57.542 45.455 0.00 0.00 36.16 3.95
2332 12812 4.382362 GGCTCCTCTGAAATTTGAATTGGG 60.382 45.833 0.00 0.00 0.00 4.12
2364 12844 5.163499 ACAACTCCTGGTTTTTATTTCGCAA 60.163 36.000 0.00 0.00 35.74 4.85
2365 12845 4.339814 ACAACTCCTGGTTTTTATTTCGCA 59.660 37.500 0.00 0.00 35.74 5.10
2366 12846 4.866921 ACAACTCCTGGTTTTTATTTCGC 58.133 39.130 0.00 0.00 35.74 4.70
2371 12851 8.562052 CGTTTTACTACAACTCCTGGTTTTTAT 58.438 33.333 0.00 0.00 35.74 1.40
2377 12857 4.677673 ACGTTTTACTACAACTCCTGGT 57.322 40.909 0.00 0.00 0.00 4.00
2378 12858 6.392354 TCATACGTTTTACTACAACTCCTGG 58.608 40.000 0.00 0.00 0.00 4.45
2379 12859 7.544566 ACATCATACGTTTTACTACAACTCCTG 59.455 37.037 0.00 0.00 0.00 3.86
2380 12860 7.609056 ACATCATACGTTTTACTACAACTCCT 58.391 34.615 0.00 0.00 0.00 3.69
2381 12861 7.253552 CGACATCATACGTTTTACTACAACTCC 60.254 40.741 0.00 0.00 0.00 3.85
2382 12862 7.272084 ACGACATCATACGTTTTACTACAACTC 59.728 37.037 0.00 0.00 39.75 3.01
2383 12863 7.061441 CACGACATCATACGTTTTACTACAACT 59.939 37.037 0.00 0.00 40.76 3.16
2384 12864 7.162246 CACGACATCATACGTTTTACTACAAC 58.838 38.462 0.00 0.00 40.76 3.32
2385 12865 6.183360 GCACGACATCATACGTTTTACTACAA 60.183 38.462 0.00 0.00 40.76 2.41
2386 12866 5.286797 GCACGACATCATACGTTTTACTACA 59.713 40.000 0.00 0.00 40.76 2.74
2387 12867 5.286797 TGCACGACATCATACGTTTTACTAC 59.713 40.000 0.00 0.00 40.76 2.73
2388 12868 5.400703 TGCACGACATCATACGTTTTACTA 58.599 37.500 0.00 0.00 40.76 1.82
2389 12869 4.239304 TGCACGACATCATACGTTTTACT 58.761 39.130 0.00 0.00 40.76 2.24
2390 12870 4.571375 TGCACGACATCATACGTTTTAC 57.429 40.909 0.00 0.00 40.76 2.01
2391 12871 4.627900 ACATGCACGACATCATACGTTTTA 59.372 37.500 0.00 0.00 40.76 1.52
2392 12872 3.435327 ACATGCACGACATCATACGTTTT 59.565 39.130 0.00 0.00 40.76 2.43
2393 12873 3.000041 ACATGCACGACATCATACGTTT 59.000 40.909 0.00 0.00 40.76 3.60
2394 12874 2.616960 ACATGCACGACATCATACGTT 58.383 42.857 0.00 0.00 40.76 3.99
2395 12875 2.293677 ACATGCACGACATCATACGT 57.706 45.000 0.00 0.00 43.50 3.57
2396 12876 2.602660 TCAACATGCACGACATCATACG 59.397 45.455 0.00 0.00 36.64 3.06
2397 12877 4.334443 GTTCAACATGCACGACATCATAC 58.666 43.478 0.00 0.00 36.64 2.39
2398 12878 3.373748 GGTTCAACATGCACGACATCATA 59.626 43.478 0.00 0.00 36.64 2.15
2399 12879 2.162208 GGTTCAACATGCACGACATCAT 59.838 45.455 0.00 0.00 36.64 2.45
2400 12880 1.535028 GGTTCAACATGCACGACATCA 59.465 47.619 0.00 0.00 36.64 3.07
2401 12881 1.135689 GGGTTCAACATGCACGACATC 60.136 52.381 0.00 0.00 36.64 3.06
2402 12882 0.881118 GGGTTCAACATGCACGACAT 59.119 50.000 0.00 0.00 40.66 3.06
2403 12883 0.464554 TGGGTTCAACATGCACGACA 60.465 50.000 0.00 0.00 0.00 4.35
2404 12884 0.238289 CTGGGTTCAACATGCACGAC 59.762 55.000 0.00 0.00 0.00 4.34
2405 12885 0.107643 TCTGGGTTCAACATGCACGA 59.892 50.000 0.00 0.00 0.00 4.35
2406 12886 0.518636 CTCTGGGTTCAACATGCACG 59.481 55.000 0.00 0.00 0.00 5.34
2407 12887 0.883833 CCTCTGGGTTCAACATGCAC 59.116 55.000 0.00 0.00 0.00 4.57
2408 12888 0.895100 GCCTCTGGGTTCAACATGCA 60.895 55.000 0.00 0.00 34.45 3.96
2409 12889 1.598701 GGCCTCTGGGTTCAACATGC 61.599 60.000 0.00 0.00 34.45 4.06
2410 12890 0.251297 TGGCCTCTGGGTTCAACATG 60.251 55.000 3.32 0.00 34.45 3.21
2411 12891 0.706433 ATGGCCTCTGGGTTCAACAT 59.294 50.000 3.32 0.00 34.45 2.71
2412 12892 0.251297 CATGGCCTCTGGGTTCAACA 60.251 55.000 3.32 0.00 34.45 3.33
2413 12893 0.038166 TCATGGCCTCTGGGTTCAAC 59.962 55.000 3.32 0.00 34.45 3.18
2414 12894 0.038166 GTCATGGCCTCTGGGTTCAA 59.962 55.000 3.32 0.00 34.45 2.69
2415 12895 1.133181 TGTCATGGCCTCTGGGTTCA 61.133 55.000 3.32 0.00 34.45 3.18
2416 12896 0.257039 ATGTCATGGCCTCTGGGTTC 59.743 55.000 3.32 0.00 34.45 3.62
2417 12897 1.595311 TATGTCATGGCCTCTGGGTT 58.405 50.000 3.32 0.00 34.45 4.11
2418 12898 1.825105 ATATGTCATGGCCTCTGGGT 58.175 50.000 3.32 0.00 34.45 4.51
2419 12899 3.371273 CCATATATGTCATGGCCTCTGGG 60.371 52.174 11.73 0.00 36.77 4.45
2420 12900 3.882444 CCATATATGTCATGGCCTCTGG 58.118 50.000 11.73 0.00 36.77 3.86
2427 12907 4.155462 GCACAAGAGCCATATATGTCATGG 59.845 45.833 11.73 0.00 44.94 3.66
2428 12908 5.292671 GCACAAGAGCCATATATGTCATG 57.707 43.478 11.73 8.95 0.00 3.07
2446 12926 2.651105 TACTCCGCGGATTGGCACA 61.651 57.895 31.19 4.26 0.00 4.57
2447 12927 2.171725 GTACTCCGCGGATTGGCAC 61.172 63.158 31.19 14.52 0.00 5.01
2448 12928 1.966901 ATGTACTCCGCGGATTGGCA 61.967 55.000 31.19 24.48 0.00 4.92
2449 12929 0.814010 AATGTACTCCGCGGATTGGC 60.814 55.000 31.19 19.84 0.00 4.52
2450 12930 1.217882 GAATGTACTCCGCGGATTGG 58.782 55.000 31.19 20.18 0.00 3.16
2451 12931 0.852777 CGAATGTACTCCGCGGATTG 59.147 55.000 31.19 21.00 0.00 2.67
2452 12932 0.874607 GCGAATGTACTCCGCGGATT 60.875 55.000 31.19 26.39 39.54 3.01
2453 12933 1.299926 GCGAATGTACTCCGCGGAT 60.300 57.895 31.19 20.63 39.54 4.18
2454 12934 2.103538 GCGAATGTACTCCGCGGA 59.896 61.111 29.03 29.03 39.54 5.54
2458 12938 2.279252 CCCGGCGAATGTACTCCG 60.279 66.667 9.30 0.00 41.41 4.63
2459 12939 0.108041 TTTCCCGGCGAATGTACTCC 60.108 55.000 9.30 0.00 0.00 3.85
2460 12940 1.729284 TTTTCCCGGCGAATGTACTC 58.271 50.000 9.30 0.00 0.00 2.59
2461 12941 2.014128 CATTTTCCCGGCGAATGTACT 58.986 47.619 9.30 0.00 0.00 2.73
2462 12942 1.533129 GCATTTTCCCGGCGAATGTAC 60.533 52.381 9.30 0.00 34.19 2.90
2463 12943 0.736053 GCATTTTCCCGGCGAATGTA 59.264 50.000 9.30 0.00 34.19 2.29
2464 12944 1.510844 GCATTTTCCCGGCGAATGT 59.489 52.632 9.30 5.16 34.19 2.71
2465 12945 1.226945 GGCATTTTCCCGGCGAATG 60.227 57.895 9.30 11.66 34.67 2.67
2466 12946 3.206374 GGCATTTTCCCGGCGAAT 58.794 55.556 9.30 0.00 0.00 3.34
2471 12951 0.179140 CATTGTCGGCATTTTCCCGG 60.179 55.000 0.00 0.00 45.60 5.73
2472 12952 0.179140 CCATTGTCGGCATTTTCCCG 60.179 55.000 0.00 0.00 46.88 5.14
2473 12953 0.894835 ACCATTGTCGGCATTTTCCC 59.105 50.000 0.00 0.00 0.00 3.97
2474 12954 1.543802 TGACCATTGTCGGCATTTTCC 59.456 47.619 0.00 0.00 44.86 3.13
2475 12955 2.595386 GTGACCATTGTCGGCATTTTC 58.405 47.619 0.00 0.00 44.86 2.29
2476 12956 1.272212 GGTGACCATTGTCGGCATTTT 59.728 47.619 0.00 0.00 44.86 1.82
2477 12957 0.887933 GGTGACCATTGTCGGCATTT 59.112 50.000 0.00 0.00 44.86 2.32
2478 12958 0.251121 TGGTGACCATTGTCGGCATT 60.251 50.000 0.00 0.00 44.86 3.56
2479 12959 0.960364 GTGGTGACCATTGTCGGCAT 60.960 55.000 7.94 0.00 44.86 4.40
2480 12960 1.599518 GTGGTGACCATTGTCGGCA 60.600 57.895 7.94 0.00 44.86 5.69
2481 12961 1.298859 GAGTGGTGACCATTGTCGGC 61.299 60.000 7.94 0.00 44.86 5.54
2482 12962 0.034756 TGAGTGGTGACCATTGTCGG 59.965 55.000 7.94 0.00 44.86 4.79
2483 12963 1.148310 GTGAGTGGTGACCATTGTCG 58.852 55.000 7.94 0.00 44.86 4.35
2484 12964 1.202758 TGGTGAGTGGTGACCATTGTC 60.203 52.381 7.94 6.11 37.32 3.18
2485 12965 0.843309 TGGTGAGTGGTGACCATTGT 59.157 50.000 7.94 0.00 37.32 2.71
2486 12966 1.238439 GTGGTGAGTGGTGACCATTG 58.762 55.000 7.94 0.00 44.08 2.82
2487 12967 0.110486 GGTGGTGAGTGGTGACCATT 59.890 55.000 7.94 2.36 44.08 3.16
2488 12968 1.059584 TGGTGGTGAGTGGTGACCAT 61.060 55.000 7.94 0.00 44.08 3.55
2489 12969 1.275421 TTGGTGGTGAGTGGTGACCA 61.275 55.000 0.00 0.00 40.04 4.02
2490 12970 0.818040 GTTGGTGGTGAGTGGTGACC 60.818 60.000 0.00 0.00 0.00 4.02
2491 12971 0.180406 AGTTGGTGGTGAGTGGTGAC 59.820 55.000 0.00 0.00 0.00 3.67
2492 12972 1.796017 TAGTTGGTGGTGAGTGGTGA 58.204 50.000 0.00 0.00 0.00 4.02
2493 12973 2.859165 ATAGTTGGTGGTGAGTGGTG 57.141 50.000 0.00 0.00 0.00 4.17
2494 12974 2.570302 GGTATAGTTGGTGGTGAGTGGT 59.430 50.000 0.00 0.00 0.00 4.16
2495 12975 2.838202 AGGTATAGTTGGTGGTGAGTGG 59.162 50.000 0.00 0.00 0.00 4.00
2496 12976 3.369471 CCAGGTATAGTTGGTGGTGAGTG 60.369 52.174 0.00 0.00 0.00 3.51
2497 12977 2.838202 CCAGGTATAGTTGGTGGTGAGT 59.162 50.000 0.00 0.00 0.00 3.41
2498 12978 2.420129 GCCAGGTATAGTTGGTGGTGAG 60.420 54.545 4.77 0.00 36.81 3.51
2499 12979 1.557832 GCCAGGTATAGTTGGTGGTGA 59.442 52.381 4.77 0.00 36.81 4.02
2500 12980 1.408266 GGCCAGGTATAGTTGGTGGTG 60.408 57.143 0.00 0.00 36.81 4.17
2501 12981 0.916809 GGCCAGGTATAGTTGGTGGT 59.083 55.000 0.00 0.00 36.81 4.16
2502 12982 0.916086 TGGCCAGGTATAGTTGGTGG 59.084 55.000 0.00 0.00 36.81 4.61
2503 12983 1.742411 CGTGGCCAGGTATAGTTGGTG 60.742 57.143 17.47 0.00 36.81 4.17
2504 12984 0.539986 CGTGGCCAGGTATAGTTGGT 59.460 55.000 17.47 0.00 36.81 3.67
2505 12985 0.179056 CCGTGGCCAGGTATAGTTGG 60.179 60.000 23.21 2.34 37.53 3.77
2506 12986 0.179056 CCCGTGGCCAGGTATAGTTG 60.179 60.000 23.21 6.65 0.00 3.16
2507 12987 0.325860 TCCCGTGGCCAGGTATAGTT 60.326 55.000 23.21 0.00 0.00 2.24
2508 12988 0.105142 ATCCCGTGGCCAGGTATAGT 60.105 55.000 23.21 2.84 0.00 2.12
2509 12989 1.549170 GTATCCCGTGGCCAGGTATAG 59.451 57.143 23.21 8.42 0.00 1.31
2510 12990 1.636148 GTATCCCGTGGCCAGGTATA 58.364 55.000 23.21 16.70 0.00 1.47
2511 12991 1.125711 GGTATCCCGTGGCCAGGTAT 61.126 60.000 23.21 17.63 0.00 2.73
2512 12992 1.763256 GGTATCCCGTGGCCAGGTA 60.763 63.158 23.21 11.94 0.00 3.08
2513 12993 3.087906 GGTATCCCGTGGCCAGGT 61.088 66.667 23.21 8.39 0.00 4.00
2514 12994 3.873812 GGGTATCCCGTGGCCAGG 61.874 72.222 18.72 18.72 32.13 4.45
2556 13036 2.983592 CAACCCACGGGCAAGACC 60.984 66.667 0.69 0.00 39.32 3.85
2557 13037 2.983592 CCAACCCACGGGCAAGAC 60.984 66.667 0.69 0.00 39.32 3.01
2558 13038 4.278513 CCCAACCCACGGGCAAGA 62.279 66.667 0.69 0.00 36.72 3.02
2575 13055 1.134699 GCTCAAATTTTAGGCCCAGGC 60.135 52.381 0.00 0.00 41.06 4.85
2576 13056 1.482182 GGCTCAAATTTTAGGCCCAGG 59.518 52.381 13.51 0.00 37.12 4.45
2577 13057 2.967599 GGCTCAAATTTTAGGCCCAG 57.032 50.000 13.51 0.00 37.12 4.45
2581 13061 2.159240 CCTTCGGGCTCAAATTTTAGGC 60.159 50.000 15.61 15.61 37.55 3.93
2582 13062 3.089284 ACCTTCGGGCTCAAATTTTAGG 58.911 45.455 1.73 0.00 39.10 2.69
2583 13063 4.485163 CAACCTTCGGGCTCAAATTTTAG 58.515 43.478 0.00 0.00 39.10 1.85
2584 13064 3.257127 CCAACCTTCGGGCTCAAATTTTA 59.743 43.478 0.00 0.00 39.10 1.52
2585 13065 2.037121 CCAACCTTCGGGCTCAAATTTT 59.963 45.455 0.00 0.00 39.10 1.82
2586 13066 1.618343 CCAACCTTCGGGCTCAAATTT 59.382 47.619 0.00 0.00 39.10 1.82
2587 13067 1.256812 CCAACCTTCGGGCTCAAATT 58.743 50.000 0.00 0.00 39.10 1.82
2588 13068 0.611896 CCCAACCTTCGGGCTCAAAT 60.612 55.000 0.00 0.00 36.72 2.32
2589 13069 1.228429 CCCAACCTTCGGGCTCAAA 60.228 57.895 0.00 0.00 36.72 2.69
2590 13070 2.434331 CCCAACCTTCGGGCTCAA 59.566 61.111 0.00 0.00 36.72 3.02
2598 13078 4.678743 AAGCCCGGCCCAACCTTC 62.679 66.667 5.55 0.00 35.61 3.46
2599 13079 4.994756 CAAGCCCGGCCCAACCTT 62.995 66.667 5.55 0.00 35.61 3.50
2608 13088 3.868200 AAGTCAAGCCCAAGCCCGG 62.868 63.158 0.00 0.00 41.25 5.73
2609 13089 1.463553 AAAAGTCAAGCCCAAGCCCG 61.464 55.000 0.00 0.00 41.25 6.13
2610 13090 0.758734 AAAAAGTCAAGCCCAAGCCC 59.241 50.000 0.00 0.00 41.25 5.19
2626 13106 5.358725 AGGTCTCTTTCCTAAAACGCAAAAA 59.641 36.000 0.00 0.00 33.04 1.94
2627 13107 4.885325 AGGTCTCTTTCCTAAAACGCAAAA 59.115 37.500 0.00 0.00 33.04 2.44
2628 13108 4.274950 CAGGTCTCTTTCCTAAAACGCAAA 59.725 41.667 0.00 0.00 33.54 3.68
2629 13109 3.813166 CAGGTCTCTTTCCTAAAACGCAA 59.187 43.478 0.00 0.00 33.54 4.85
2630 13110 3.070446 TCAGGTCTCTTTCCTAAAACGCA 59.930 43.478 0.00 0.00 33.54 5.24
2631 13111 3.660865 TCAGGTCTCTTTCCTAAAACGC 58.339 45.455 0.00 0.00 33.54 4.84
2632 13112 4.246458 CCTCAGGTCTCTTTCCTAAAACG 58.754 47.826 0.00 0.00 33.54 3.60
2633 13113 4.004314 GCCTCAGGTCTCTTTCCTAAAAC 58.996 47.826 0.00 0.00 33.54 2.43
2634 13114 3.910627 AGCCTCAGGTCTCTTTCCTAAAA 59.089 43.478 0.00 0.00 33.54 1.52
2635 13115 3.521727 AGCCTCAGGTCTCTTTCCTAAA 58.478 45.455 0.00 0.00 33.54 1.85
2636 13116 3.191888 AGCCTCAGGTCTCTTTCCTAA 57.808 47.619 0.00 0.00 33.54 2.69
2637 13117 2.930109 AGCCTCAGGTCTCTTTCCTA 57.070 50.000 0.00 0.00 33.54 2.94
2638 13118 2.313342 TCTAGCCTCAGGTCTCTTTCCT 59.687 50.000 0.00 0.00 35.45 3.36
2639 13119 2.741145 TCTAGCCTCAGGTCTCTTTCC 58.259 52.381 0.00 0.00 0.00 3.13
2640 13120 3.069443 CCATCTAGCCTCAGGTCTCTTTC 59.931 52.174 0.00 0.00 0.00 2.62
2641 13121 3.037549 CCATCTAGCCTCAGGTCTCTTT 58.962 50.000 0.00 0.00 0.00 2.52
2642 13122 2.676748 CCATCTAGCCTCAGGTCTCTT 58.323 52.381 0.00 0.00 0.00 2.85
2643 13123 1.133199 CCCATCTAGCCTCAGGTCTCT 60.133 57.143 0.00 0.00 0.00 3.10
2644 13124 1.337118 CCCATCTAGCCTCAGGTCTC 58.663 60.000 0.00 0.00 0.00 3.36
2645 13125 0.762461 GCCCATCTAGCCTCAGGTCT 60.762 60.000 0.00 0.00 0.00 3.85
2646 13126 0.762461 AGCCCATCTAGCCTCAGGTC 60.762 60.000 0.00 0.00 0.00 3.85
2647 13127 1.053264 CAGCCCATCTAGCCTCAGGT 61.053 60.000 0.00 0.00 0.00 4.00
2648 13128 0.762082 TCAGCCCATCTAGCCTCAGG 60.762 60.000 0.00 0.00 0.00 3.86
2649 13129 0.680618 CTCAGCCCATCTAGCCTCAG 59.319 60.000 0.00 0.00 0.00 3.35
2650 13130 1.406065 GCTCAGCCCATCTAGCCTCA 61.406 60.000 0.00 0.00 0.00 3.86
2651 13131 1.370810 GCTCAGCCCATCTAGCCTC 59.629 63.158 0.00 0.00 0.00 4.70
2652 13132 0.767446 ATGCTCAGCCCATCTAGCCT 60.767 55.000 0.00 0.00 33.99 4.58
2653 13133 0.605860 CATGCTCAGCCCATCTAGCC 60.606 60.000 0.00 0.00 33.99 3.93
2654 13134 0.605860 CCATGCTCAGCCCATCTAGC 60.606 60.000 0.00 0.00 35.51 3.42
2655 13135 0.036448 CCCATGCTCAGCCCATCTAG 59.964 60.000 0.00 0.00 0.00 2.43
2656 13136 2.060567 GCCCATGCTCAGCCCATCTA 62.061 60.000 0.00 0.00 33.53 1.98
2657 13137 2.924640 CCCATGCTCAGCCCATCT 59.075 61.111 0.00 0.00 0.00 2.90
2658 13138 2.910994 GCCCATGCTCAGCCCATC 60.911 66.667 0.00 0.00 33.53 3.51
2659 13139 4.534824 GGCCCATGCTCAGCCCAT 62.535 66.667 0.00 0.00 41.00 4.00
2663 13143 1.041447 ATTTCAGGCCCATGCTCAGC 61.041 55.000 0.00 0.00 37.74 4.26
2664 13144 1.030457 GATTTCAGGCCCATGCTCAG 58.970 55.000 0.00 0.00 37.74 3.35
2665 13145 0.627451 AGATTTCAGGCCCATGCTCA 59.373 50.000 0.00 0.00 37.74 4.26
2666 13146 2.502295 CTAGATTTCAGGCCCATGCTC 58.498 52.381 0.00 0.00 37.74 4.26
2667 13147 1.144503 CCTAGATTTCAGGCCCATGCT 59.855 52.381 0.00 0.00 37.74 3.79
2668 13148 1.613836 CCTAGATTTCAGGCCCATGC 58.386 55.000 0.00 0.00 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.