Multiple sequence alignment - TraesCS4A01G481100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G481100 chr4A 100.000 1812 0 0 1 1812 737148418 737150229 0.000000e+00 3347
1 TraesCS4A01G481100 chr4A 100.000 317 0 0 2026 2342 737150443 737150759 9.320000e-164 586
2 TraesCS4A01G481100 chr7A 88.455 1178 82 29 674 1811 6680046 6678883 0.000000e+00 1373
3 TraesCS4A01G481100 chr7A 89.609 972 60 19 812 1759 6787584 6786630 0.000000e+00 1197
4 TraesCS4A01G481100 chr7A 88.592 710 52 15 812 1509 6778239 6777547 0.000000e+00 835
5 TraesCS4A01G481100 chr7A 87.629 291 20 7 1502 1779 6777465 6777178 8.070000e-85 324
6 TraesCS4A01G481100 chr7A 87.500 208 25 1 1605 1812 6661255 6661049 3.010000e-59 239
7 TraesCS4A01G481100 chr7A 79.757 247 14 10 5 223 6788242 6788004 1.880000e-31 147
8 TraesCS4A01G481100 chr7A 77.953 254 10 13 3 225 6680683 6680445 1.470000e-22 117
9 TraesCS4A01G481100 chr7D 91.825 685 34 13 674 1353 5338908 5338241 0.000000e+00 935
10 TraesCS4A01G481100 chr7D 89.583 288 28 2 2031 2318 262356000 262356285 4.760000e-97 364
11 TraesCS4A01G481100 chr7D 89.236 288 31 0 2031 2318 136239927 136240214 6.150000e-96 361
12 TraesCS4A01G481100 chr7D 88.034 117 5 3 1368 1477 5338257 5338143 1.890000e-26 130
13 TraesCS4A01G481100 chr5D 90.972 288 23 3 2031 2318 486145141 486145425 3.650000e-103 385
14 TraesCS4A01G481100 chr6D 90.278 288 26 2 2031 2318 43483089 43482804 2.200000e-100 375
15 TraesCS4A01G481100 chr4D 90.244 287 27 1 2031 2317 77116986 77116701 7.900000e-100 374
16 TraesCS4A01G481100 chr3D 89.965 289 24 4 2031 2318 512957030 512957314 3.680000e-98 368
17 TraesCS4A01G481100 chr3D 89.583 288 27 3 2031 2317 68885191 68885476 1.710000e-96 363
18 TraesCS4A01G481100 chr3D 89.236 288 30 1 2030 2317 474846787 474846501 2.210000e-95 359
19 TraesCS4A01G481100 chr1D 89.547 287 28 2 2031 2317 15617625 15617909 1.710000e-96 363
20 TraesCS4A01G481100 chr3B 95.814 215 6 1 457 671 95159000 95158789 6.200000e-91 344
21 TraesCS4A01G481100 chr6B 95.349 215 8 1 457 671 712070433 712070221 8.020000e-90 340
22 TraesCS4A01G481100 chr2B 95.283 212 6 1 457 668 64949976 64950183 1.340000e-87 333
23 TraesCS4A01G481100 chr7B 94.118 221 8 1 457 677 610348539 610348324 4.820000e-87 331
24 TraesCS4A01G481100 chr7B 93.953 215 7 1 457 671 634632413 634632205 1.040000e-83 320


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G481100 chr4A 737148418 737150759 2341 False 1966.5 3347 100.0000 1 2342 2 chr4A.!!$F1 2341
1 TraesCS4A01G481100 chr7A 6678883 6680683 1800 True 745.0 1373 83.2040 3 1811 2 chr7A.!!$R2 1808
2 TraesCS4A01G481100 chr7A 6786630 6788242 1612 True 672.0 1197 84.6830 5 1759 2 chr7A.!!$R4 1754
3 TraesCS4A01G481100 chr7A 6777178 6778239 1061 True 579.5 835 88.1105 812 1779 2 chr7A.!!$R3 967
4 TraesCS4A01G481100 chr7D 5338143 5338908 765 True 532.5 935 89.9295 674 1477 2 chr7D.!!$R1 803

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
283 367 0.037326 ATGAGTGCGGCGAAGAAGAA 60.037 50.0 12.98 0.0 0.0 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2260 2490 0.179018 GGAATGGGCAATCTAGCGGT 60.179 55.0 0.0 0.0 34.64 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 7.138736 CGAATTACAAATTGAGTGAAAGGTGT 58.861 34.615 0.00 0.00 0.00 4.16
78 79 3.485463 AATTGAGTGAAAGGTGTCCGA 57.515 42.857 0.00 0.00 0.00 4.55
143 168 9.736023 AAACTATTTTGCAGCTAAATATGTAGC 57.264 29.630 16.06 16.06 45.77 3.58
144 169 7.875971 ACTATTTTGCAGCTAAATATGTAGCC 58.124 34.615 19.48 7.59 46.46 3.93
145 170 5.514274 TTTTGCAGCTAAATATGTAGCCC 57.486 39.130 19.48 12.34 46.46 5.19
147 172 3.476552 TGCAGCTAAATATGTAGCCCAC 58.523 45.455 19.48 10.85 46.46 4.61
148 173 3.118075 TGCAGCTAAATATGTAGCCCACA 60.118 43.478 19.48 13.02 46.46 4.17
149 174 3.251004 GCAGCTAAATATGTAGCCCACAC 59.749 47.826 19.48 3.51 46.46 3.82
150 175 3.494626 CAGCTAAATATGTAGCCCACACG 59.505 47.826 19.48 0.68 46.46 4.49
225 264 2.983592 CCAACTTCACCGGTGGGC 60.984 66.667 33.40 0.00 36.48 5.36
226 265 2.203280 CAACTTCACCGGTGGGCA 60.203 61.111 33.40 17.10 36.48 5.36
227 266 1.826054 CAACTTCACCGGTGGGCAA 60.826 57.895 33.40 19.64 36.48 4.52
228 267 1.152830 AACTTCACCGGTGGGCAAT 59.847 52.632 33.40 14.11 36.48 3.56
229 268 0.402504 AACTTCACCGGTGGGCAATA 59.597 50.000 33.40 11.27 36.48 1.90
230 269 0.402504 ACTTCACCGGTGGGCAATAA 59.597 50.000 33.40 18.19 36.48 1.40
231 270 1.202952 ACTTCACCGGTGGGCAATAAA 60.203 47.619 33.40 17.48 36.48 1.40
232 271 1.889829 CTTCACCGGTGGGCAATAAAA 59.110 47.619 33.40 16.75 36.48 1.52
233 272 1.249407 TCACCGGTGGGCAATAAAAC 58.751 50.000 33.40 0.00 36.48 2.43
235 274 0.113580 ACCGGTGGGCAATAAAACCT 59.886 50.000 6.12 0.00 36.48 3.50
243 327 2.556559 GGGCAATAAAACCTGAGGTCCA 60.557 50.000 3.76 0.00 33.12 4.02
251 335 3.425162 AACCTGAGGTCCATCAAGAAC 57.575 47.619 3.76 0.00 33.12 3.01
260 344 3.244561 GGTCCATCAAGAACTTGGAGACA 60.245 47.826 21.28 5.60 40.11 3.41
278 362 1.446792 AGTGATGAGTGCGGCGAAG 60.447 57.895 12.98 0.00 0.00 3.79
279 363 1.446099 GTGATGAGTGCGGCGAAGA 60.446 57.895 12.98 0.00 0.00 2.87
280 364 1.014044 GTGATGAGTGCGGCGAAGAA 61.014 55.000 12.98 0.00 0.00 2.52
281 365 0.737367 TGATGAGTGCGGCGAAGAAG 60.737 55.000 12.98 0.00 0.00 2.85
282 366 0.458543 GATGAGTGCGGCGAAGAAGA 60.459 55.000 12.98 0.00 0.00 2.87
283 367 0.037326 ATGAGTGCGGCGAAGAAGAA 60.037 50.000 12.98 0.00 0.00 2.52
284 368 0.249699 TGAGTGCGGCGAAGAAGAAA 60.250 50.000 12.98 0.00 0.00 2.52
285 369 0.164002 GAGTGCGGCGAAGAAGAAAC 59.836 55.000 12.98 0.00 0.00 2.78
286 370 1.206831 GTGCGGCGAAGAAGAAACC 59.793 57.895 12.98 0.00 0.00 3.27
306 390 2.416836 CCCGACATGTAGATGAACACGT 60.417 50.000 6.90 0.00 33.36 4.49
320 404 3.860605 ACGTGCCTGCACCACTGA 61.861 61.111 16.06 0.00 43.49 3.41
321 405 2.591429 CGTGCCTGCACCACTGAA 60.591 61.111 16.06 0.00 43.49 3.02
322 406 2.186160 CGTGCCTGCACCACTGAAA 61.186 57.895 16.06 0.00 43.49 2.69
323 407 1.360192 GTGCCTGCACCACTGAAAC 59.640 57.895 11.16 0.00 40.79 2.78
326 410 1.227823 CCTGCACCACTGAAACGGA 60.228 57.895 0.00 0.00 0.00 4.69
327 411 0.817634 CCTGCACCACTGAAACGGAA 60.818 55.000 0.00 0.00 0.00 4.30
328 412 1.021202 CTGCACCACTGAAACGGAAA 58.979 50.000 0.00 0.00 0.00 3.13
329 413 1.002468 CTGCACCACTGAAACGGAAAG 60.002 52.381 0.00 0.00 0.00 2.62
331 415 1.675552 CACCACTGAAACGGAAAGGT 58.324 50.000 0.00 0.00 0.00 3.50
332 416 1.333619 CACCACTGAAACGGAAAGGTG 59.666 52.381 0.00 0.00 39.04 4.00
333 417 1.064979 ACCACTGAAACGGAAAGGTGT 60.065 47.619 0.00 0.00 0.00 4.16
334 418 1.333619 CCACTGAAACGGAAAGGTGTG 59.666 52.381 0.00 0.00 0.00 3.82
335 419 1.333619 CACTGAAACGGAAAGGTGTGG 59.666 52.381 0.00 0.00 0.00 4.17
336 420 0.310854 CTGAAACGGAAAGGTGTGGC 59.689 55.000 0.00 0.00 0.00 5.01
337 421 0.106918 TGAAACGGAAAGGTGTGGCT 60.107 50.000 0.00 0.00 0.00 4.75
338 422 0.310854 GAAACGGAAAGGTGTGGCTG 59.689 55.000 0.00 0.00 0.00 4.85
339 423 1.106944 AAACGGAAAGGTGTGGCTGG 61.107 55.000 0.00 0.00 0.00 4.85
340 424 2.113139 CGGAAAGGTGTGGCTGGT 59.887 61.111 0.00 0.00 0.00 4.00
342 426 1.603739 GGAAAGGTGTGGCTGGTCC 60.604 63.158 0.00 0.00 0.00 4.46
343 427 1.603739 GAAAGGTGTGGCTGGTCCC 60.604 63.158 0.00 0.00 0.00 4.46
363 447 2.281208 GTGCACACACGCCCCTTA 60.281 61.111 13.17 0.00 36.98 2.69
364 448 1.674322 GTGCACACACGCCCCTTAT 60.674 57.895 13.17 0.00 36.98 1.73
365 449 1.376683 TGCACACACGCCCCTTATC 60.377 57.895 0.00 0.00 0.00 1.75
366 450 1.078426 GCACACACGCCCCTTATCT 60.078 57.895 0.00 0.00 0.00 1.98
368 452 0.249120 CACACACGCCCCTTATCTCA 59.751 55.000 0.00 0.00 0.00 3.27
369 453 0.537188 ACACACGCCCCTTATCTCAG 59.463 55.000 0.00 0.00 0.00 3.35
370 454 0.811616 CACACGCCCCTTATCTCAGC 60.812 60.000 0.00 0.00 0.00 4.26
371 455 1.227674 CACGCCCCTTATCTCAGCC 60.228 63.158 0.00 0.00 0.00 4.85
372 456 1.383248 ACGCCCCTTATCTCAGCCT 60.383 57.895 0.00 0.00 0.00 4.58
373 457 0.983378 ACGCCCCTTATCTCAGCCTT 60.983 55.000 0.00 0.00 0.00 4.35
376 460 1.212935 GCCCCTTATCTCAGCCTTTGA 59.787 52.381 0.00 0.00 0.00 2.69
377 461 2.158549 GCCCCTTATCTCAGCCTTTGAT 60.159 50.000 0.00 0.00 34.68 2.57
379 463 4.540715 CCCCTTATCTCAGCCTTTGATTT 58.459 43.478 0.00 0.00 34.68 2.17
380 464 5.694995 CCCCTTATCTCAGCCTTTGATTTA 58.305 41.667 0.00 0.00 34.68 1.40
381 465 6.310149 CCCCTTATCTCAGCCTTTGATTTAT 58.690 40.000 0.00 0.00 34.68 1.40
382 466 6.779539 CCCCTTATCTCAGCCTTTGATTTATT 59.220 38.462 0.00 0.00 34.68 1.40
384 468 8.355913 CCCTTATCTCAGCCTTTGATTTATTTC 58.644 37.037 0.00 0.00 34.68 2.17
386 470 8.731275 TTATCTCAGCCTTTGATTTATTTCGA 57.269 30.769 0.00 0.00 34.68 3.71
387 471 6.668541 TCTCAGCCTTTGATTTATTTCGAG 57.331 37.500 0.00 0.00 34.68 4.04
388 472 6.406370 TCTCAGCCTTTGATTTATTTCGAGA 58.594 36.000 0.00 0.00 34.68 4.04
389 473 7.050377 TCTCAGCCTTTGATTTATTTCGAGAT 58.950 34.615 0.00 0.00 34.68 2.75
390 474 7.554118 TCTCAGCCTTTGATTTATTTCGAGATT 59.446 33.333 0.00 0.00 34.68 2.40
391 475 7.697691 TCAGCCTTTGATTTATTTCGAGATTC 58.302 34.615 0.00 0.00 0.00 2.52
392 476 6.630443 CAGCCTTTGATTTATTTCGAGATTCG 59.370 38.462 0.00 0.00 42.10 3.34
393 477 6.316390 AGCCTTTGATTTATTTCGAGATTCGT 59.684 34.615 0.00 0.00 41.35 3.85
394 478 7.494625 AGCCTTTGATTTATTTCGAGATTCGTA 59.505 33.333 0.00 0.00 41.35 3.43
395 479 7.794349 GCCTTTGATTTATTTCGAGATTCGTAG 59.206 37.037 0.00 0.00 41.35 3.51
396 480 7.794349 CCTTTGATTTATTTCGAGATTCGTAGC 59.206 37.037 0.00 0.00 41.35 3.58
397 481 7.764695 TTGATTTATTTCGAGATTCGTAGCA 57.235 32.000 0.00 0.00 41.35 3.49
398 482 7.946655 TGATTTATTTCGAGATTCGTAGCAT 57.053 32.000 0.00 0.00 41.35 3.79
399 483 7.787084 TGATTTATTTCGAGATTCGTAGCATG 58.213 34.615 0.00 0.00 41.35 4.06
400 484 7.438160 TGATTTATTTCGAGATTCGTAGCATGT 59.562 33.333 0.00 0.00 41.35 3.21
401 485 6.510746 TTATTTCGAGATTCGTAGCATGTG 57.489 37.500 0.00 0.00 41.35 3.21
402 486 3.503827 TTCGAGATTCGTAGCATGTGT 57.496 42.857 0.00 0.00 41.35 3.72
403 487 2.797491 TCGAGATTCGTAGCATGTGTG 58.203 47.619 0.00 0.00 41.35 3.82
404 488 2.422127 TCGAGATTCGTAGCATGTGTGA 59.578 45.455 0.00 0.00 41.35 3.58
405 489 2.531912 CGAGATTCGTAGCATGTGTGAC 59.468 50.000 0.00 0.00 34.72 3.67
406 490 3.732169 CGAGATTCGTAGCATGTGTGACT 60.732 47.826 0.00 0.00 34.72 3.41
407 491 3.775202 AGATTCGTAGCATGTGTGACTC 58.225 45.455 0.00 0.00 0.00 3.36
408 492 2.363788 TTCGTAGCATGTGTGACTCC 57.636 50.000 0.00 0.00 0.00 3.85
409 493 1.545841 TCGTAGCATGTGTGACTCCT 58.454 50.000 0.00 0.00 0.00 3.69
410 494 1.472878 TCGTAGCATGTGTGACTCCTC 59.527 52.381 0.00 0.00 0.00 3.71
411 495 1.795525 CGTAGCATGTGTGACTCCTCG 60.796 57.143 0.00 0.00 0.00 4.63
412 496 0.173481 TAGCATGTGTGACTCCTCGC 59.827 55.000 0.00 0.00 0.00 5.03
413 497 1.374631 GCATGTGTGACTCCTCGCA 60.375 57.895 0.00 0.00 34.39 5.10
414 498 1.357258 GCATGTGTGACTCCTCGCAG 61.357 60.000 0.00 0.00 37.60 5.18
415 499 0.244721 CATGTGTGACTCCTCGCAGA 59.755 55.000 0.00 0.00 37.60 4.26
426 510 4.898002 TCGCAGAGCATCAGTGAC 57.102 55.556 0.00 0.00 36.17 3.67
430 514 1.080995 GCAGAGCATCAGTGACCGAC 61.081 60.000 0.00 0.00 37.82 4.79
434 518 0.529833 AGCATCAGTGACCGACTCTG 59.470 55.000 0.00 0.00 40.26 3.35
436 520 1.337260 GCATCAGTGACCGACTCTGTT 60.337 52.381 0.00 2.38 39.96 3.16
437 521 2.094700 GCATCAGTGACCGACTCTGTTA 60.095 50.000 0.00 0.00 39.96 2.41
438 522 3.614150 GCATCAGTGACCGACTCTGTTAA 60.614 47.826 0.00 0.00 39.96 2.01
442 526 3.123621 CAGTGACCGACTCTGTTAATTGC 59.876 47.826 0.00 0.00 35.97 3.56
446 530 2.009774 CCGACTCTGTTAATTGCCTGG 58.990 52.381 0.00 0.00 0.00 4.45
462 546 1.656652 CTGGGGCAGACTATGTTTCG 58.343 55.000 0.00 0.00 32.44 3.46
463 547 0.981183 TGGGGCAGACTATGTTTCGT 59.019 50.000 0.00 0.00 0.00 3.85
464 548 1.338674 TGGGGCAGACTATGTTTCGTG 60.339 52.381 0.00 0.00 0.00 4.35
465 549 1.338769 GGGGCAGACTATGTTTCGTGT 60.339 52.381 0.00 0.00 0.00 4.49
466 550 2.423577 GGGCAGACTATGTTTCGTGTT 58.576 47.619 0.00 0.00 0.00 3.32
471 555 5.849604 GGCAGACTATGTTTCGTGTTTTTAC 59.150 40.000 0.00 0.00 0.00 2.01
472 556 5.558888 GCAGACTATGTTTCGTGTTTTTACG 59.441 40.000 0.00 0.00 44.98 3.18
473 557 6.642917 CAGACTATGTTTCGTGTTTTTACGT 58.357 36.000 0.00 0.00 44.06 3.57
474 558 6.568601 CAGACTATGTTTCGTGTTTTTACGTG 59.431 38.462 0.00 0.00 44.06 4.49
476 560 6.413269 ACTATGTTTCGTGTTTTTACGTGAC 58.587 36.000 0.00 0.00 44.06 3.67
479 563 4.152045 TGTTTCGTGTTTTTACGTGACACT 59.848 37.500 17.82 0.00 44.06 3.55
480 564 4.503767 TTCGTGTTTTTACGTGACACTC 57.496 40.909 17.82 3.90 44.06 3.51
484 568 4.574759 GTGTTTTTACGTGACACTCACTG 58.425 43.478 14.82 0.00 44.85 3.66
486 570 5.006358 GTGTTTTTACGTGACACTCACTGAT 59.994 40.000 14.82 0.00 44.85 2.90
487 571 5.583061 TGTTTTTACGTGACACTCACTGATT 59.417 36.000 0.00 0.00 44.85 2.57
488 572 5.651172 TTTTACGTGACACTCACTGATTG 57.349 39.130 0.00 0.00 44.85 2.67
489 573 1.502231 ACGTGACACTCACTGATTGC 58.498 50.000 3.68 0.00 44.85 3.56
490 574 1.069204 ACGTGACACTCACTGATTGCT 59.931 47.619 3.68 0.00 44.85 3.91
491 575 2.296190 ACGTGACACTCACTGATTGCTA 59.704 45.455 3.68 0.00 44.85 3.49
492 576 2.663602 CGTGACACTCACTGATTGCTAC 59.336 50.000 3.68 0.00 44.85 3.58
493 577 3.653344 GTGACACTCACTGATTGCTACA 58.347 45.455 0.00 0.00 43.73 2.74
494 578 3.677121 GTGACACTCACTGATTGCTACAG 59.323 47.826 0.00 0.00 43.73 2.74
495 579 3.573967 TGACACTCACTGATTGCTACAGA 59.426 43.478 11.04 0.00 38.55 3.41
496 580 3.919216 ACACTCACTGATTGCTACAGAC 58.081 45.455 11.04 0.00 38.55 3.51
500 584 4.281941 ACTCACTGATTGCTACAGACTTGA 59.718 41.667 11.04 5.28 38.55 3.02
501 585 5.046735 ACTCACTGATTGCTACAGACTTGAT 60.047 40.000 11.04 0.00 38.55 2.57
502 586 5.798132 TCACTGATTGCTACAGACTTGATT 58.202 37.500 11.04 0.00 38.55 2.57
503 587 5.871524 TCACTGATTGCTACAGACTTGATTC 59.128 40.000 11.04 0.00 38.55 2.52
504 588 5.064452 CACTGATTGCTACAGACTTGATTCC 59.936 44.000 11.04 0.00 38.55 3.01
505 589 4.517285 TGATTGCTACAGACTTGATTCCC 58.483 43.478 0.00 0.00 0.00 3.97
506 590 4.225942 TGATTGCTACAGACTTGATTCCCT 59.774 41.667 0.00 0.00 0.00 4.20
507 591 3.895232 TGCTACAGACTTGATTCCCTC 57.105 47.619 0.00 0.00 0.00 4.30
508 592 3.445008 TGCTACAGACTTGATTCCCTCT 58.555 45.455 0.00 0.00 0.00 3.69
509 593 3.449018 TGCTACAGACTTGATTCCCTCTC 59.551 47.826 0.00 0.00 0.00 3.20
510 594 3.181470 GCTACAGACTTGATTCCCTCTCC 60.181 52.174 0.00 0.00 0.00 3.71
511 595 1.827969 ACAGACTTGATTCCCTCTCCG 59.172 52.381 0.00 0.00 0.00 4.63
514 598 2.697751 AGACTTGATTCCCTCTCCGATG 59.302 50.000 0.00 0.00 0.00 3.84
515 599 1.139853 ACTTGATTCCCTCTCCGATGC 59.860 52.381 0.00 0.00 0.00 3.91
516 600 0.104855 TTGATTCCCTCTCCGATGCG 59.895 55.000 0.00 0.00 0.00 4.73
517 601 1.043116 TGATTCCCTCTCCGATGCGT 61.043 55.000 0.00 0.00 0.00 5.24
519 603 1.340248 GATTCCCTCTCCGATGCGTAA 59.660 52.381 0.00 0.00 0.00 3.18
520 604 1.410004 TTCCCTCTCCGATGCGTAAT 58.590 50.000 0.00 0.00 0.00 1.89
523 607 1.867233 CCCTCTCCGATGCGTAATTTG 59.133 52.381 0.00 0.00 0.00 2.32
524 608 1.261619 CCTCTCCGATGCGTAATTTGC 59.738 52.381 0.00 0.00 0.00 3.68
525 609 2.205074 CTCTCCGATGCGTAATTTGCT 58.795 47.619 4.31 0.00 0.00 3.91
526 610 2.201732 TCTCCGATGCGTAATTTGCTC 58.798 47.619 4.31 0.07 0.00 4.26
529 613 2.287644 TCCGATGCGTAATTTGCTCATG 59.712 45.455 0.00 0.00 0.00 3.07
530 614 2.032054 CCGATGCGTAATTTGCTCATGT 59.968 45.455 0.00 0.00 0.00 3.21
531 615 3.487376 CCGATGCGTAATTTGCTCATGTT 60.487 43.478 0.00 0.00 0.00 2.71
533 617 4.494690 CGATGCGTAATTTGCTCATGTTCT 60.495 41.667 0.00 0.00 0.00 3.01
534 618 4.082274 TGCGTAATTTGCTCATGTTCTG 57.918 40.909 0.00 0.00 0.00 3.02
535 619 2.848302 GCGTAATTTGCTCATGTTCTGC 59.152 45.455 0.00 0.00 0.00 4.26
538 622 3.587797 AATTTGCTCATGTTCTGCCAG 57.412 42.857 0.00 0.00 0.00 4.85
539 623 0.599558 TTTGCTCATGTTCTGCCAGC 59.400 50.000 0.00 0.00 0.00 4.85
541 625 2.789917 CTCATGTTCTGCCAGCGC 59.210 61.111 0.00 0.00 0.00 5.92
542 626 1.744368 CTCATGTTCTGCCAGCGCT 60.744 57.895 2.64 2.64 35.36 5.92
544 628 2.033141 ATGTTCTGCCAGCGCTGT 59.967 55.556 33.75 11.89 35.56 4.40
546 630 1.859427 ATGTTCTGCCAGCGCTGTTG 61.859 55.000 33.75 21.49 35.56 3.33
569 653 4.424566 GCACGCCCAACAGCCATG 62.425 66.667 0.00 0.00 0.00 3.66
570 654 4.424566 CACGCCCAACAGCCATGC 62.425 66.667 0.00 0.00 0.00 4.06
571 655 4.666253 ACGCCCAACAGCCATGCT 62.666 61.111 0.00 0.00 40.77 3.79
602 691 0.817634 TTGAGGGAACAACAGCCGTG 60.818 55.000 0.00 0.00 0.00 4.94
603 692 2.594592 AGGGAACAACAGCCGTGC 60.595 61.111 0.00 0.00 0.00 5.34
604 693 2.594592 GGGAACAACAGCCGTGCT 60.595 61.111 0.00 0.00 40.77 4.40
614 703 4.695231 GCCGTGCTGTTGCTGCTG 62.695 66.667 0.00 0.00 40.48 4.41
615 704 4.695231 CCGTGCTGTTGCTGCTGC 62.695 66.667 8.89 8.89 40.48 5.25
617 706 3.653009 GTGCTGTTGCTGCTGCGA 61.653 61.111 11.21 6.22 43.34 5.10
624 713 1.004679 TTGCTGCTGCGACTGATGA 60.005 52.632 11.21 0.00 43.34 2.92
625 714 1.017701 TTGCTGCTGCGACTGATGAG 61.018 55.000 11.21 0.00 43.34 2.90
626 715 1.153686 GCTGCTGCGACTGATGAGA 60.154 57.895 0.00 0.00 0.00 3.27
627 716 1.419874 GCTGCTGCGACTGATGAGAC 61.420 60.000 0.00 0.00 0.00 3.36
628 717 0.108945 CTGCTGCGACTGATGAGACA 60.109 55.000 0.00 0.00 0.00 3.41
629 718 0.108945 TGCTGCGACTGATGAGACAG 60.109 55.000 0.00 0.00 42.78 3.51
638 727 3.109044 CTGATGAGACAGTATGCCTGG 57.891 52.381 0.00 0.00 46.06 4.45
642 731 2.203070 GACAGTATGCCTGGCCCG 60.203 66.667 17.53 0.00 44.14 6.13
643 732 3.009115 ACAGTATGCCTGGCCCGT 61.009 61.111 17.53 4.86 46.06 5.28
644 733 2.514592 CAGTATGCCTGGCCCGTG 60.515 66.667 17.53 4.63 37.54 4.94
645 734 2.687200 AGTATGCCTGGCCCGTGA 60.687 61.111 17.53 0.00 0.00 4.35
646 735 2.513897 GTATGCCTGGCCCGTGAC 60.514 66.667 17.53 3.07 0.00 3.67
647 736 4.155733 TATGCCTGGCCCGTGACG 62.156 66.667 17.53 0.00 0.00 4.35
664 753 2.124320 GGCATGGCCCACATACGT 60.124 61.111 8.35 0.00 44.06 3.57
665 754 2.186826 GGCATGGCCCACATACGTC 61.187 63.158 8.35 0.00 44.06 4.34
666 755 1.153168 GCATGGCCCACATACGTCT 60.153 57.895 0.00 0.00 37.84 4.18
667 756 1.160329 GCATGGCCCACATACGTCTC 61.160 60.000 0.00 0.00 37.84 3.36
668 757 0.532862 CATGGCCCACATACGTCTCC 60.533 60.000 0.00 0.00 37.84 3.71
669 758 2.028125 ATGGCCCACATACGTCTCCG 62.028 60.000 0.00 0.00 38.26 4.63
671 760 1.226888 GCCCACATACGTCTCCGTC 60.227 63.158 0.00 0.00 46.28 4.79
672 761 1.436336 CCCACATACGTCTCCGTCC 59.564 63.158 0.00 0.00 46.28 4.79
681 770 5.302568 ACATACGTCTCCGTCCCATTTATTA 59.697 40.000 0.00 0.00 46.28 0.98
732 821 0.462759 CTTCTCCTTGTCGGGGATGC 60.463 60.000 0.00 0.00 43.46 3.91
735 824 0.816825 CTCCTTGTCGGGGATGCATG 60.817 60.000 2.46 0.00 33.87 4.06
736 825 1.825191 CCTTGTCGGGGATGCATGG 60.825 63.158 2.46 0.00 0.00 3.66
737 826 2.440065 TTGTCGGGGATGCATGGC 60.440 61.111 2.46 0.00 0.00 4.40
738 827 2.898920 CTTGTCGGGGATGCATGGCT 62.899 60.000 2.46 0.00 0.00 4.75
739 828 1.631071 TTGTCGGGGATGCATGGCTA 61.631 55.000 2.46 0.00 0.00 3.93
740 829 1.598130 GTCGGGGATGCATGGCTAC 60.598 63.158 2.46 0.00 0.00 3.58
741 830 2.281761 CGGGGATGCATGGCTACC 60.282 66.667 2.46 0.00 0.00 3.18
742 831 2.926250 GGGGATGCATGGCTACCA 59.074 61.111 2.46 0.00 38.19 3.25
743 832 1.229927 GGGGATGCATGGCTACCAA 59.770 57.895 2.46 0.00 36.95 3.67
744 833 0.396974 GGGGATGCATGGCTACCAAA 60.397 55.000 2.46 0.00 36.95 3.28
745 834 1.484038 GGGATGCATGGCTACCAAAA 58.516 50.000 2.46 0.00 36.95 2.44
746 835 1.410153 GGGATGCATGGCTACCAAAAG 59.590 52.381 2.46 0.00 36.95 2.27
747 836 2.102578 GGATGCATGGCTACCAAAAGT 58.897 47.619 2.46 0.00 36.95 2.66
748 837 2.099756 GGATGCATGGCTACCAAAAGTC 59.900 50.000 2.46 0.00 36.95 3.01
749 838 1.544724 TGCATGGCTACCAAAAGTCC 58.455 50.000 0.00 0.00 36.95 3.85
750 839 1.202989 TGCATGGCTACCAAAAGTCCA 60.203 47.619 0.00 0.00 36.95 4.02
787 880 4.082408 CACAGGCATGTCATGTTTGATTCT 60.082 41.667 19.20 4.48 37.65 2.40
803 896 7.662258 TGTTTGATTCTAACACCGAGGAAATTA 59.338 33.333 9.20 0.00 30.96 1.40
1032 1138 1.300233 GCTGAATCTAGACGGCGGG 60.300 63.158 13.24 0.00 0.00 6.13
1087 1193 1.597663 GTAGGCGTGTGTTCATATGCC 59.402 52.381 20.05 20.05 38.54 4.40
1089 1195 1.484653 AGGCGTGTGTTCATATGCCTA 59.515 47.619 25.95 0.00 42.94 3.93
1108 1214 3.164977 TGGGTTGCCTCACCGTCA 61.165 61.111 0.00 0.00 37.76 4.35
1212 1318 4.056125 CTGACCGGCGCTGTCTCA 62.056 66.667 24.02 18.41 33.83 3.27
1342 1448 3.129287 GCCCTTGATCAACATGTTGTAGG 59.871 47.826 31.99 28.74 41.16 3.18
1354 1467 6.648879 ACATGTTGTAGGTGCATAGTTTTT 57.351 33.333 0.00 0.00 0.00 1.94
1441 1567 8.873830 TGTAGCGTCTAGAATATATACCGTTAC 58.126 37.037 12.18 12.18 33.38 2.50
1513 1727 1.064803 TCCACATGTTGCACAAACGTC 59.935 47.619 0.00 0.00 42.10 4.34
1586 1813 4.082523 CTCGCCGCCTCCTCCAAA 62.083 66.667 0.00 0.00 0.00 3.28
1608 1835 3.803186 CCTAGGGCATCAGAATTCCAT 57.197 47.619 0.00 0.00 0.00 3.41
1615 1842 4.142790 GGCATCAGAATTCCATCATCACT 58.857 43.478 0.65 0.00 0.00 3.41
1616 1843 4.583489 GGCATCAGAATTCCATCATCACTT 59.417 41.667 0.65 0.00 0.00 3.16
1645 1872 2.615912 GCACCTACAAATCTGGATCTGC 59.384 50.000 0.00 0.00 0.00 4.26
1665 1892 6.195700 TCTGCTACTAAATGGTAGTCCTCTT 58.804 40.000 5.93 0.00 40.70 2.85
1685 1912 6.466326 CCTCTTAGAGTCTCTCTCCATCTCAT 60.466 46.154 5.39 0.00 43.71 2.90
1731 1961 0.902531 AATTCTCCGGTGGACACGAT 59.097 50.000 0.00 0.00 0.00 3.73
1748 1978 3.127548 CACGATGGCAAGACAATTAAGCT 59.872 43.478 0.00 0.00 0.00 3.74
1781 2011 2.094894 CGCAGCATGGTTAAGAACAGAG 59.905 50.000 0.00 0.00 35.86 3.35
1795 2025 1.094785 ACAGAGCACACAAACACCAC 58.905 50.000 0.00 0.00 0.00 4.16
1811 2041 0.394899 CCACTGATTTCCAGCTCCCC 60.395 60.000 0.00 0.00 46.81 4.81
2042 2272 4.208686 CGCTACAGTCTCGCCCCC 62.209 72.222 0.00 0.00 0.00 5.40
2043 2273 3.075005 GCTACAGTCTCGCCCCCA 61.075 66.667 0.00 0.00 0.00 4.96
2044 2274 3.082579 GCTACAGTCTCGCCCCCAG 62.083 68.421 0.00 0.00 0.00 4.45
2045 2275 2.363795 TACAGTCTCGCCCCCAGG 60.364 66.667 0.00 0.00 0.00 4.45
2046 2276 2.856039 CTACAGTCTCGCCCCCAGGA 62.856 65.000 0.00 0.00 33.47 3.86
2047 2277 3.775654 CAGTCTCGCCCCCAGGAC 61.776 72.222 0.00 0.00 33.47 3.85
2048 2278 4.316823 AGTCTCGCCCCCAGGACA 62.317 66.667 0.00 0.00 33.47 4.02
2049 2279 3.083997 GTCTCGCCCCCAGGACAT 61.084 66.667 0.00 0.00 33.47 3.06
2050 2280 2.285368 TCTCGCCCCCAGGACATT 60.285 61.111 0.00 0.00 33.47 2.71
2051 2281 2.124570 CTCGCCCCCAGGACATTG 60.125 66.667 0.00 0.00 33.47 2.82
2052 2282 2.609299 TCGCCCCCAGGACATTGA 60.609 61.111 0.00 0.00 33.47 2.57
2053 2283 2.196997 CTCGCCCCCAGGACATTGAA 62.197 60.000 0.00 0.00 33.47 2.69
2054 2284 1.304052 CGCCCCCAGGACATTGAAA 60.304 57.895 0.00 0.00 33.47 2.69
2055 2285 0.684153 CGCCCCCAGGACATTGAAAT 60.684 55.000 0.00 0.00 33.47 2.17
2056 2286 1.114627 GCCCCCAGGACATTGAAATC 58.885 55.000 0.00 0.00 33.47 2.17
2057 2287 1.780503 CCCCCAGGACATTGAAATCC 58.219 55.000 0.00 0.00 33.47 3.01
2058 2288 1.392589 CCCCAGGACATTGAAATCCG 58.607 55.000 0.00 0.00 40.20 4.18
2059 2289 0.740737 CCCAGGACATTGAAATCCGC 59.259 55.000 0.00 0.00 40.20 5.54
2060 2290 0.740737 CCAGGACATTGAAATCCGCC 59.259 55.000 0.00 0.00 40.20 6.13
2061 2291 0.378257 CAGGACATTGAAATCCGCCG 59.622 55.000 0.00 0.00 40.20 6.46
2062 2292 0.251916 AGGACATTGAAATCCGCCGA 59.748 50.000 0.00 0.00 40.20 5.54
2063 2293 1.134098 AGGACATTGAAATCCGCCGAT 60.134 47.619 0.00 0.00 40.20 4.18
2064 2294 1.676006 GGACATTGAAATCCGCCGATT 59.324 47.619 0.00 0.00 40.58 3.34
2065 2295 2.287009 GGACATTGAAATCCGCCGATTC 60.287 50.000 0.62 0.00 37.76 2.52
2066 2296 1.330521 ACATTGAAATCCGCCGATTCG 59.669 47.619 0.62 0.00 37.76 3.34
2076 2306 3.270000 CCGATTCGGCCCGTTTTT 58.730 55.556 12.95 0.00 41.17 1.94
2077 2307 1.154112 CCGATTCGGCCCGTTTTTG 60.154 57.895 12.95 0.00 41.17 2.44
2078 2308 1.154112 CGATTCGGCCCGTTTTTGG 60.154 57.895 1.63 0.00 0.00 3.28
2141 2371 4.388499 GGACTCCGGCGCAAGGAA 62.388 66.667 21.56 8.61 37.32 3.36
2142 2372 2.358247 GACTCCGGCGCAAGGAAA 60.358 61.111 21.56 4.23 37.32 3.13
2143 2373 1.964373 GACTCCGGCGCAAGGAAAA 60.964 57.895 21.56 3.58 37.32 2.29
2144 2374 1.512156 GACTCCGGCGCAAGGAAAAA 61.512 55.000 21.56 3.26 37.32 1.94
2145 2375 1.210155 CTCCGGCGCAAGGAAAAAG 59.790 57.895 21.56 8.96 37.32 2.27
2146 2376 2.430751 CCGGCGCAAGGAAAAAGC 60.431 61.111 15.06 0.00 38.28 3.51
2147 2377 2.334653 CGGCGCAAGGAAAAAGCA 59.665 55.556 10.83 0.00 38.28 3.91
2148 2378 2.016165 CGGCGCAAGGAAAAAGCAC 61.016 57.895 10.83 0.00 38.28 4.40
2149 2379 2.016165 GGCGCAAGGAAAAAGCACG 61.016 57.895 10.83 0.00 38.28 5.34
2150 2380 1.299089 GCGCAAGGAAAAAGCACGT 60.299 52.632 0.30 0.00 38.28 4.49
2151 2381 1.268778 GCGCAAGGAAAAAGCACGTC 61.269 55.000 0.30 0.00 38.28 4.34
2152 2382 0.307760 CGCAAGGAAAAAGCACGTCT 59.692 50.000 0.00 0.00 0.00 4.18
2153 2383 1.758783 GCAAGGAAAAAGCACGTCTG 58.241 50.000 0.00 0.00 0.00 3.51
2154 2384 1.600413 GCAAGGAAAAAGCACGTCTGG 60.600 52.381 0.00 0.00 0.00 3.86
2155 2385 0.668535 AAGGAAAAAGCACGTCTGGC 59.331 50.000 0.00 0.00 0.00 4.85
2156 2386 1.172812 AGGAAAAAGCACGTCTGGCC 61.173 55.000 0.00 0.00 0.00 5.36
2157 2387 1.285950 GAAAAAGCACGTCTGGCCC 59.714 57.895 0.00 0.00 0.00 5.80
2158 2388 1.452145 GAAAAAGCACGTCTGGCCCA 61.452 55.000 0.00 0.00 0.00 5.36
2159 2389 1.734388 AAAAAGCACGTCTGGCCCAC 61.734 55.000 0.00 0.00 0.00 4.61
2160 2390 2.902423 AAAAGCACGTCTGGCCCACA 62.902 55.000 0.00 0.00 0.00 4.17
2161 2391 4.626081 AGCACGTCTGGCCCACAC 62.626 66.667 0.00 0.00 0.00 3.82
2163 2393 4.248842 CACGTCTGGCCCACACCA 62.249 66.667 0.00 0.00 38.29 4.17
2164 2394 3.249189 ACGTCTGGCCCACACCAT 61.249 61.111 0.00 0.00 39.54 3.55
2165 2395 2.436646 CGTCTGGCCCACACCATC 60.437 66.667 0.00 0.00 39.54 3.51
2166 2396 2.756400 GTCTGGCCCACACCATCA 59.244 61.111 0.00 0.00 39.54 3.07
2167 2397 1.377725 GTCTGGCCCACACCATCAG 60.378 63.158 0.00 0.00 39.54 2.90
2168 2398 2.044650 CTGGCCCACACCATCAGG 60.045 66.667 0.00 0.00 39.54 3.86
2169 2399 4.365111 TGGCCCACACCATCAGGC 62.365 66.667 0.00 0.00 44.99 4.85
2171 2401 4.408821 GCCCACACCATCAGGCGA 62.409 66.667 0.00 0.00 39.06 5.54
2172 2402 2.350895 CCCACACCATCAGGCGAA 59.649 61.111 0.00 0.00 39.06 4.70
2173 2403 1.303236 CCCACACCATCAGGCGAAA 60.303 57.895 0.00 0.00 39.06 3.46
2174 2404 0.893270 CCCACACCATCAGGCGAAAA 60.893 55.000 0.00 0.00 39.06 2.29
2175 2405 0.523072 CCACACCATCAGGCGAAAAG 59.477 55.000 0.00 0.00 39.06 2.27
2176 2406 1.238439 CACACCATCAGGCGAAAAGT 58.762 50.000 0.00 0.00 39.06 2.66
2177 2407 1.197721 CACACCATCAGGCGAAAAGTC 59.802 52.381 0.00 0.00 39.06 3.01
2178 2408 1.202758 ACACCATCAGGCGAAAAGTCA 60.203 47.619 0.00 0.00 39.06 3.41
2179 2409 1.879380 CACCATCAGGCGAAAAGTCAA 59.121 47.619 0.00 0.00 39.06 3.18
2180 2410 2.095567 CACCATCAGGCGAAAAGTCAAG 60.096 50.000 0.00 0.00 39.06 3.02
2181 2411 1.135575 CCATCAGGCGAAAAGTCAAGC 60.136 52.381 0.00 0.00 0.00 4.01
2182 2412 1.536766 CATCAGGCGAAAAGTCAAGCA 59.463 47.619 0.00 0.00 0.00 3.91
2183 2413 1.896220 TCAGGCGAAAAGTCAAGCAT 58.104 45.000 0.00 0.00 0.00 3.79
2184 2414 1.536766 TCAGGCGAAAAGTCAAGCATG 59.463 47.619 0.00 0.00 41.93 4.06
2185 2415 1.267806 CAGGCGAAAAGTCAAGCATGT 59.732 47.619 0.00 0.00 36.75 3.21
2186 2416 1.537202 AGGCGAAAAGTCAAGCATGTC 59.463 47.619 0.00 0.00 0.00 3.06
2187 2417 1.537202 GGCGAAAAGTCAAGCATGTCT 59.463 47.619 0.00 0.00 0.00 3.41
2188 2418 2.030805 GGCGAAAAGTCAAGCATGTCTT 60.031 45.455 0.00 0.00 36.65 3.01
2189 2419 3.229552 GCGAAAAGTCAAGCATGTCTTC 58.770 45.455 2.05 0.00 34.49 2.87
2190 2420 3.814945 CGAAAAGTCAAGCATGTCTTCC 58.185 45.455 2.05 0.00 34.49 3.46
2191 2421 3.250762 CGAAAAGTCAAGCATGTCTTCCA 59.749 43.478 2.05 0.00 34.49 3.53
2192 2422 4.612259 CGAAAAGTCAAGCATGTCTTCCAG 60.612 45.833 2.05 0.00 34.49 3.86
2193 2423 3.777106 AAGTCAAGCATGTCTTCCAGA 57.223 42.857 0.00 0.00 30.57 3.86
2194 2424 3.996921 AGTCAAGCATGTCTTCCAGAT 57.003 42.857 0.00 0.00 31.27 2.90
2195 2425 4.298103 AGTCAAGCATGTCTTCCAGATT 57.702 40.909 0.00 0.00 31.27 2.40
2196 2426 4.260170 AGTCAAGCATGTCTTCCAGATTC 58.740 43.478 0.00 0.00 31.27 2.52
2197 2427 3.063180 GTCAAGCATGTCTTCCAGATTCG 59.937 47.826 0.00 0.00 31.27 3.34
2198 2428 1.661341 AGCATGTCTTCCAGATTCGC 58.339 50.000 0.00 0.00 0.00 4.70
2199 2429 0.659957 GCATGTCTTCCAGATTCGCC 59.340 55.000 0.00 0.00 0.00 5.54
2200 2430 1.745141 GCATGTCTTCCAGATTCGCCT 60.745 52.381 0.00 0.00 0.00 5.52
2201 2431 2.208431 CATGTCTTCCAGATTCGCCTC 58.792 52.381 0.00 0.00 0.00 4.70
2202 2432 0.537188 TGTCTTCCAGATTCGCCTCC 59.463 55.000 0.00 0.00 0.00 4.30
2203 2433 0.179070 GTCTTCCAGATTCGCCTCCC 60.179 60.000 0.00 0.00 0.00 4.30
2204 2434 0.617535 TCTTCCAGATTCGCCTCCCA 60.618 55.000 0.00 0.00 0.00 4.37
2205 2435 0.462759 CTTCCAGATTCGCCTCCCAC 60.463 60.000 0.00 0.00 0.00 4.61
2206 2436 1.910580 TTCCAGATTCGCCTCCCACC 61.911 60.000 0.00 0.00 0.00 4.61
2207 2437 2.190578 CAGATTCGCCTCCCACCC 59.809 66.667 0.00 0.00 0.00 4.61
2208 2438 3.090532 AGATTCGCCTCCCACCCC 61.091 66.667 0.00 0.00 0.00 4.95
2209 2439 4.191015 GATTCGCCTCCCACCCCC 62.191 72.222 0.00 0.00 0.00 5.40
2266 2496 4.015406 CACTGCCCACCACCGCTA 62.015 66.667 0.00 0.00 0.00 4.26
2267 2497 3.706373 ACTGCCCACCACCGCTAG 61.706 66.667 0.00 0.00 0.00 3.42
2268 2498 3.390521 CTGCCCACCACCGCTAGA 61.391 66.667 0.00 0.00 0.00 2.43
2269 2499 2.687200 TGCCCACCACCGCTAGAT 60.687 61.111 0.00 0.00 0.00 1.98
2270 2500 2.257409 CTGCCCACCACCGCTAGATT 62.257 60.000 0.00 0.00 0.00 2.40
2271 2501 1.819632 GCCCACCACCGCTAGATTG 60.820 63.158 0.00 0.00 0.00 2.67
2272 2502 1.819632 CCCACCACCGCTAGATTGC 60.820 63.158 0.00 0.00 0.00 3.56
2273 2503 1.819632 CCACCACCGCTAGATTGCC 60.820 63.158 0.00 0.00 0.00 4.52
2274 2504 1.819632 CACCACCGCTAGATTGCCC 60.820 63.158 0.00 0.00 0.00 5.36
2275 2505 2.297895 ACCACCGCTAGATTGCCCA 61.298 57.895 0.00 0.00 0.00 5.36
2276 2506 1.149174 CCACCGCTAGATTGCCCAT 59.851 57.895 0.00 0.00 0.00 4.00
2277 2507 0.466189 CCACCGCTAGATTGCCCATT 60.466 55.000 0.00 0.00 0.00 3.16
2278 2508 0.947244 CACCGCTAGATTGCCCATTC 59.053 55.000 0.00 0.00 0.00 2.67
2279 2509 0.179018 ACCGCTAGATTGCCCATTCC 60.179 55.000 0.00 0.00 0.00 3.01
2280 2510 0.890996 CCGCTAGATTGCCCATTCCC 60.891 60.000 0.00 0.00 0.00 3.97
2281 2511 0.890996 CGCTAGATTGCCCATTCCCC 60.891 60.000 0.00 0.00 0.00 4.81
2282 2512 0.890996 GCTAGATTGCCCATTCCCCG 60.891 60.000 0.00 0.00 0.00 5.73
2283 2513 0.890996 CTAGATTGCCCATTCCCCGC 60.891 60.000 0.00 0.00 0.00 6.13
2284 2514 2.351924 TAGATTGCCCATTCCCCGCC 62.352 60.000 0.00 0.00 0.00 6.13
2290 2520 3.377759 CCATTCCCCGCCGCAAAA 61.378 61.111 0.00 0.00 0.00 2.44
2291 2521 2.653702 CATTCCCCGCCGCAAAAA 59.346 55.556 0.00 0.00 0.00 1.94
2292 2522 1.445926 CATTCCCCGCCGCAAAAAG 60.446 57.895 0.00 0.00 0.00 2.27
2293 2523 1.605165 ATTCCCCGCCGCAAAAAGA 60.605 52.632 0.00 0.00 0.00 2.52
2294 2524 1.595093 ATTCCCCGCCGCAAAAAGAG 61.595 55.000 0.00 0.00 0.00 2.85
2295 2525 4.419939 CCCCGCCGCAAAAAGAGC 62.420 66.667 0.00 0.00 0.00 4.09
2296 2526 3.669344 CCCGCCGCAAAAAGAGCA 61.669 61.111 0.00 0.00 0.00 4.26
2297 2527 2.126734 CCGCCGCAAAAAGAGCAG 60.127 61.111 0.00 0.00 0.00 4.24
2298 2528 2.616330 CCGCCGCAAAAAGAGCAGA 61.616 57.895 0.00 0.00 0.00 4.26
2299 2529 1.154338 CGCCGCAAAAAGAGCAGAG 60.154 57.895 0.00 0.00 0.00 3.35
2300 2530 1.211190 GCCGCAAAAAGAGCAGAGG 59.789 57.895 0.00 0.00 0.00 3.69
2301 2531 1.518903 GCCGCAAAAAGAGCAGAGGT 61.519 55.000 0.00 0.00 0.00 3.85
2302 2532 0.954452 CCGCAAAAAGAGCAGAGGTT 59.046 50.000 0.00 0.00 0.00 3.50
2303 2533 1.335324 CCGCAAAAAGAGCAGAGGTTG 60.335 52.381 0.00 0.00 0.00 3.77
2304 2534 1.334869 CGCAAAAAGAGCAGAGGTTGT 59.665 47.619 0.00 0.00 0.00 3.32
2305 2535 2.735823 GCAAAAAGAGCAGAGGTTGTG 58.264 47.619 0.00 0.00 0.00 3.33
2306 2536 2.735823 CAAAAAGAGCAGAGGTTGTGC 58.264 47.619 0.00 0.00 41.54 4.57
2307 2537 1.322442 AAAAGAGCAGAGGTTGTGCC 58.678 50.000 0.00 0.00 42.24 5.01
2308 2538 0.886490 AAAGAGCAGAGGTTGTGCCG 60.886 55.000 0.00 0.00 42.24 5.69
2309 2539 1.758440 AAGAGCAGAGGTTGTGCCGA 61.758 55.000 0.00 0.00 42.24 5.54
2310 2540 1.739562 GAGCAGAGGTTGTGCCGAG 60.740 63.158 0.00 0.00 42.24 4.63
2311 2541 2.743928 GCAGAGGTTGTGCCGAGG 60.744 66.667 0.00 0.00 43.70 4.63
2312 2542 3.059982 CAGAGGTTGTGCCGAGGA 58.940 61.111 0.00 0.00 43.70 3.71
2313 2543 1.371183 CAGAGGTTGTGCCGAGGAA 59.629 57.895 0.00 0.00 43.70 3.36
2314 2544 0.671781 CAGAGGTTGTGCCGAGGAAG 60.672 60.000 0.00 0.00 43.70 3.46
2315 2545 2.032681 AGGTTGTGCCGAGGAAGC 59.967 61.111 0.00 0.00 43.70 3.86
2316 2546 3.056328 GGTTGTGCCGAGGAAGCC 61.056 66.667 0.00 0.00 0.00 4.35
2317 2547 2.032681 GTTGTGCCGAGGAAGCCT 59.967 61.111 0.00 0.00 36.03 4.58
2318 2548 1.295423 GTTGTGCCGAGGAAGCCTA 59.705 57.895 0.00 0.00 31.76 3.93
2319 2549 1.019805 GTTGTGCCGAGGAAGCCTAC 61.020 60.000 0.00 0.00 31.76 3.18
2320 2550 1.192146 TTGTGCCGAGGAAGCCTACT 61.192 55.000 0.00 0.00 31.76 2.57
2321 2551 1.153549 GTGCCGAGGAAGCCTACTG 60.154 63.158 0.00 0.00 31.76 2.74
2322 2552 2.202946 GCCGAGGAAGCCTACTGC 60.203 66.667 0.00 0.00 41.71 4.40
2323 2553 3.019003 GCCGAGGAAGCCTACTGCA 62.019 63.158 0.00 0.00 44.83 4.41
2324 2554 1.826024 CCGAGGAAGCCTACTGCAT 59.174 57.895 0.00 0.00 44.83 3.96
2325 2555 0.531532 CCGAGGAAGCCTACTGCATG 60.532 60.000 0.00 0.00 44.83 4.06
2326 2556 1.156645 CGAGGAAGCCTACTGCATGC 61.157 60.000 11.82 11.82 44.83 4.06
2327 2557 0.179936 GAGGAAGCCTACTGCATGCT 59.820 55.000 20.33 1.26 42.35 3.79
2328 2558 0.179936 AGGAAGCCTACTGCATGCTC 59.820 55.000 20.33 4.95 44.83 4.26
2329 2559 0.179936 GGAAGCCTACTGCATGCTCT 59.820 55.000 20.33 6.07 44.83 4.09
2330 2560 1.297664 GAAGCCTACTGCATGCTCTG 58.702 55.000 20.33 11.45 44.83 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.731720 TTTGTTTTGGTGTGCTTGCC 58.268 45.000 0.00 0.00 0.00 4.52
1 2 3.820777 TTTTTGTTTTGGTGTGCTTGC 57.179 38.095 0.00 0.00 0.00 4.01
45 46 9.672086 CCTTTCACTCAATTTGTAATTCGTTTA 57.328 29.630 0.00 0.00 0.00 2.01
46 47 8.194769 ACCTTTCACTCAATTTGTAATTCGTTT 58.805 29.630 0.00 0.00 0.00 3.60
47 48 7.647715 CACCTTTCACTCAATTTGTAATTCGTT 59.352 33.333 0.00 0.00 0.00 3.85
74 75 6.282167 TGTAACTGTATCTTTTTGTGTCGGA 58.718 36.000 0.00 0.00 0.00 4.55
86 87 9.838339 CCTCCTTAATTGAATGTAACTGTATCT 57.162 33.333 0.00 0.00 0.00 1.98
87 88 9.057089 CCCTCCTTAATTGAATGTAACTGTATC 57.943 37.037 0.00 0.00 0.00 2.24
88 89 8.557450 ACCCTCCTTAATTGAATGTAACTGTAT 58.443 33.333 0.00 0.00 0.00 2.29
89 90 7.827236 CACCCTCCTTAATTGAATGTAACTGTA 59.173 37.037 0.00 0.00 0.00 2.74
142 167 3.636282 AAATTAAACTGACGTGTGGGC 57.364 42.857 0.00 0.00 0.00 5.36
143 168 4.927422 ACAAAATTAAACTGACGTGTGGG 58.073 39.130 0.00 0.00 0.00 4.61
144 169 6.528423 TGAAACAAAATTAAACTGACGTGTGG 59.472 34.615 0.00 0.00 0.00 4.17
145 170 7.499438 TGAAACAAAATTAAACTGACGTGTG 57.501 32.000 0.00 0.00 0.00 3.82
147 172 8.560576 AGATGAAACAAAATTAAACTGACGTG 57.439 30.769 0.00 0.00 0.00 4.49
148 173 8.621286 AGAGATGAAACAAAATTAAACTGACGT 58.379 29.630 0.00 0.00 0.00 4.34
205 244 2.203280 CACCGGTGAAGTTGGCCA 60.203 61.111 31.31 0.00 0.00 5.36
225 264 5.945784 TCTTGATGGACCTCAGGTTTTATTG 59.054 40.000 0.00 0.00 35.25 1.90
226 265 6.139679 TCTTGATGGACCTCAGGTTTTATT 57.860 37.500 0.00 0.00 35.25 1.40
227 266 5.779241 TCTTGATGGACCTCAGGTTTTAT 57.221 39.130 0.00 0.00 35.25 1.40
228 267 5.073144 AGTTCTTGATGGACCTCAGGTTTTA 59.927 40.000 0.00 0.00 35.25 1.52
229 268 4.141158 AGTTCTTGATGGACCTCAGGTTTT 60.141 41.667 0.00 0.00 35.25 2.43
230 269 3.395941 AGTTCTTGATGGACCTCAGGTTT 59.604 43.478 0.00 0.00 35.25 3.27
231 270 2.982488 AGTTCTTGATGGACCTCAGGTT 59.018 45.455 0.00 0.00 35.25 3.50
232 271 2.625639 AGTTCTTGATGGACCTCAGGT 58.374 47.619 0.00 0.00 39.44 4.00
233 272 3.341823 CAAGTTCTTGATGGACCTCAGG 58.658 50.000 6.71 0.00 0.00 3.86
235 274 2.978978 TCCAAGTTCTTGATGGACCTCA 59.021 45.455 13.29 0.00 38.30 3.86
243 327 4.963318 TCACTGTCTCCAAGTTCTTGAT 57.037 40.909 13.29 0.00 0.00 2.57
251 335 2.344950 GCACTCATCACTGTCTCCAAG 58.655 52.381 0.00 0.00 0.00 3.61
260 344 1.446792 CTTCGCCGCACTCATCACT 60.447 57.895 0.00 0.00 0.00 3.41
278 362 4.755411 TCATCTACATGTCGGGTTTCTTC 58.245 43.478 0.00 0.00 0.00 2.87
279 363 4.819105 TCATCTACATGTCGGGTTTCTT 57.181 40.909 0.00 0.00 0.00 2.52
280 364 4.020573 TGTTCATCTACATGTCGGGTTTCT 60.021 41.667 0.00 0.00 0.00 2.52
281 365 4.092968 GTGTTCATCTACATGTCGGGTTTC 59.907 45.833 0.00 0.00 0.00 2.78
282 366 4.000988 GTGTTCATCTACATGTCGGGTTT 58.999 43.478 0.00 0.00 0.00 3.27
283 367 3.596214 GTGTTCATCTACATGTCGGGTT 58.404 45.455 0.00 0.00 0.00 4.11
284 368 2.416836 CGTGTTCATCTACATGTCGGGT 60.417 50.000 0.00 0.00 31.79 5.28
285 369 2.193447 CGTGTTCATCTACATGTCGGG 58.807 52.381 0.00 0.00 31.79 5.14
286 370 2.598637 CACGTGTTCATCTACATGTCGG 59.401 50.000 7.58 0.00 44.29 4.79
306 390 2.186160 CGTTTCAGTGGTGCAGGCA 61.186 57.895 0.00 0.00 0.00 4.75
320 404 1.106944 CCAGCCACACCTTTCCGTTT 61.107 55.000 0.00 0.00 0.00 3.60
321 405 1.528309 CCAGCCACACCTTTCCGTT 60.528 57.895 0.00 0.00 0.00 4.44
322 406 2.113139 CCAGCCACACCTTTCCGT 59.887 61.111 0.00 0.00 0.00 4.69
323 407 1.966451 GACCAGCCACACCTTTCCG 60.966 63.158 0.00 0.00 0.00 4.30
326 410 2.520968 GGGACCAGCCACACCTTT 59.479 61.111 0.00 0.00 38.95 3.11
327 411 3.953775 CGGGACCAGCCACACCTT 61.954 66.667 0.00 0.00 38.95 3.50
346 430 1.644786 GATAAGGGGCGTGTGTGCAC 61.645 60.000 10.75 10.75 41.97 4.57
347 431 1.376683 GATAAGGGGCGTGTGTGCA 60.377 57.895 0.00 0.00 36.28 4.57
348 432 1.078426 AGATAAGGGGCGTGTGTGC 60.078 57.895 0.00 0.00 0.00 4.57
349 433 0.249120 TGAGATAAGGGGCGTGTGTG 59.751 55.000 0.00 0.00 0.00 3.82
351 435 0.811616 GCTGAGATAAGGGGCGTGTG 60.812 60.000 0.00 0.00 0.00 3.82
352 436 1.522569 GCTGAGATAAGGGGCGTGT 59.477 57.895 0.00 0.00 0.00 4.49
354 438 0.983378 AAGGCTGAGATAAGGGGCGT 60.983 55.000 0.00 0.00 0.00 5.68
357 441 3.872459 ATCAAAGGCTGAGATAAGGGG 57.128 47.619 0.54 0.00 37.52 4.79
359 443 8.072567 CGAAATAAATCAAAGGCTGAGATAAGG 58.927 37.037 2.79 0.00 37.52 2.69
360 444 8.830580 TCGAAATAAATCAAAGGCTGAGATAAG 58.169 33.333 2.79 0.00 37.52 1.73
361 445 8.731275 TCGAAATAAATCAAAGGCTGAGATAA 57.269 30.769 2.79 0.00 37.52 1.75
362 446 8.204160 TCTCGAAATAAATCAAAGGCTGAGATA 58.796 33.333 2.79 0.00 37.52 1.98
363 447 7.050377 TCTCGAAATAAATCAAAGGCTGAGAT 58.950 34.615 0.00 0.00 37.52 2.75
364 448 6.406370 TCTCGAAATAAATCAAAGGCTGAGA 58.594 36.000 0.00 0.00 37.52 3.27
365 449 6.668541 TCTCGAAATAAATCAAAGGCTGAG 57.331 37.500 0.00 0.00 37.52 3.35
366 450 7.465916 CGAATCTCGAAATAAATCAAAGGCTGA 60.466 37.037 0.00 0.00 43.74 4.26
368 452 6.316390 ACGAATCTCGAAATAAATCAAAGGCT 59.684 34.615 2.59 0.00 43.74 4.58
369 453 6.487103 ACGAATCTCGAAATAAATCAAAGGC 58.513 36.000 2.59 0.00 43.74 4.35
370 454 7.794349 GCTACGAATCTCGAAATAAATCAAAGG 59.206 37.037 2.59 0.00 43.74 3.11
371 455 8.328146 TGCTACGAATCTCGAAATAAATCAAAG 58.672 33.333 2.59 0.00 43.74 2.77
372 456 8.192068 TGCTACGAATCTCGAAATAAATCAAA 57.808 30.769 2.59 0.00 43.74 2.69
373 457 7.764695 TGCTACGAATCTCGAAATAAATCAA 57.235 32.000 2.59 0.00 43.74 2.57
376 460 7.224753 ACACATGCTACGAATCTCGAAATAAAT 59.775 33.333 2.59 0.00 43.74 1.40
377 461 6.533723 ACACATGCTACGAATCTCGAAATAAA 59.466 34.615 2.59 0.00 43.74 1.40
379 463 5.458779 CACACATGCTACGAATCTCGAAATA 59.541 40.000 2.59 0.00 43.74 1.40
380 464 4.268644 CACACATGCTACGAATCTCGAAAT 59.731 41.667 2.59 0.00 43.74 2.17
381 465 3.612423 CACACATGCTACGAATCTCGAAA 59.388 43.478 2.59 0.00 43.74 3.46
382 466 3.119637 TCACACATGCTACGAATCTCGAA 60.120 43.478 2.59 0.00 43.74 3.71
384 468 2.531912 GTCACACATGCTACGAATCTCG 59.468 50.000 0.00 0.00 46.93 4.04
386 470 3.429547 GGAGTCACACATGCTACGAATCT 60.430 47.826 0.00 0.00 0.00 2.40
387 471 2.860735 GGAGTCACACATGCTACGAATC 59.139 50.000 0.00 0.00 0.00 2.52
388 472 2.497675 AGGAGTCACACATGCTACGAAT 59.502 45.455 0.00 0.00 0.00 3.34
389 473 1.893137 AGGAGTCACACATGCTACGAA 59.107 47.619 0.00 0.00 0.00 3.85
390 474 1.472878 GAGGAGTCACACATGCTACGA 59.527 52.381 0.00 0.00 0.00 3.43
391 475 1.795525 CGAGGAGTCACACATGCTACG 60.796 57.143 0.00 0.00 0.00 3.51
392 476 1.914634 CGAGGAGTCACACATGCTAC 58.085 55.000 0.00 0.00 0.00 3.58
393 477 0.173481 GCGAGGAGTCACACATGCTA 59.827 55.000 0.00 0.00 0.00 3.49
394 478 1.079543 GCGAGGAGTCACACATGCT 60.080 57.895 0.00 0.00 0.00 3.79
395 479 1.357258 CTGCGAGGAGTCACACATGC 61.357 60.000 0.00 0.00 0.00 4.06
396 480 0.244721 TCTGCGAGGAGTCACACATG 59.755 55.000 0.00 0.00 0.00 3.21
397 481 0.529833 CTCTGCGAGGAGTCACACAT 59.470 55.000 0.00 0.00 0.00 3.21
398 482 1.959848 CTCTGCGAGGAGTCACACA 59.040 57.895 0.00 0.00 0.00 3.72
399 483 1.445238 GCTCTGCGAGGAGTCACAC 60.445 63.158 7.50 0.00 35.89 3.82
400 484 1.253593 ATGCTCTGCGAGGAGTCACA 61.254 55.000 7.50 0.00 32.71 3.58
401 485 0.527385 GATGCTCTGCGAGGAGTCAC 60.527 60.000 7.50 0.00 32.71 3.67
402 486 0.967380 TGATGCTCTGCGAGGAGTCA 60.967 55.000 7.50 7.48 32.71 3.41
403 487 0.248990 CTGATGCTCTGCGAGGAGTC 60.249 60.000 7.50 5.60 32.71 3.36
404 488 0.969917 ACTGATGCTCTGCGAGGAGT 60.970 55.000 7.50 0.00 32.71 3.85
405 489 0.528033 CACTGATGCTCTGCGAGGAG 60.528 60.000 7.50 0.00 32.71 3.69
406 490 0.967380 TCACTGATGCTCTGCGAGGA 60.967 55.000 7.50 5.20 33.93 3.71
407 491 0.805322 GTCACTGATGCTCTGCGAGG 60.805 60.000 7.50 0.00 0.00 4.63
408 492 0.805322 GGTCACTGATGCTCTGCGAG 60.805 60.000 0.00 1.80 0.00 5.03
409 493 1.216444 GGTCACTGATGCTCTGCGA 59.784 57.895 0.00 0.00 0.00 5.10
410 494 2.163390 CGGTCACTGATGCTCTGCG 61.163 63.158 0.00 0.00 0.00 5.18
411 495 1.080995 GTCGGTCACTGATGCTCTGC 61.081 60.000 0.00 0.00 0.00 4.26
412 496 0.529833 AGTCGGTCACTGATGCTCTG 59.470 55.000 0.00 0.00 32.26 3.35
413 497 0.814457 GAGTCGGTCACTGATGCTCT 59.186 55.000 0.00 0.00 34.41 4.09
414 498 0.814457 AGAGTCGGTCACTGATGCTC 59.186 55.000 0.00 0.00 34.41 4.26
415 499 0.529833 CAGAGTCGGTCACTGATGCT 59.470 55.000 0.00 0.00 37.00 3.79
416 500 0.244994 ACAGAGTCGGTCACTGATGC 59.755 55.000 6.68 0.00 37.98 3.91
417 501 2.732412 AACAGAGTCGGTCACTGATG 57.268 50.000 6.68 0.00 37.98 3.07
418 502 5.171476 CAATTAACAGAGTCGGTCACTGAT 58.829 41.667 6.68 0.00 37.98 2.90
419 503 4.556233 CAATTAACAGAGTCGGTCACTGA 58.444 43.478 6.68 0.00 37.98 3.41
420 504 3.123621 GCAATTAACAGAGTCGGTCACTG 59.876 47.826 0.00 0.00 39.90 3.66
421 505 3.326747 GCAATTAACAGAGTCGGTCACT 58.673 45.455 0.00 0.00 38.45 3.41
422 506 2.415512 GGCAATTAACAGAGTCGGTCAC 59.584 50.000 0.00 0.00 0.00 3.67
423 507 2.301870 AGGCAATTAACAGAGTCGGTCA 59.698 45.455 0.00 0.00 0.00 4.02
424 508 2.673368 CAGGCAATTAACAGAGTCGGTC 59.327 50.000 0.00 0.00 0.00 4.79
425 509 2.615493 CCAGGCAATTAACAGAGTCGGT 60.615 50.000 0.00 0.00 0.00 4.69
426 510 2.009774 CCAGGCAATTAACAGAGTCGG 58.990 52.381 0.00 0.00 0.00 4.79
442 526 1.743772 CGAAACATAGTCTGCCCCAGG 60.744 57.143 0.00 0.00 31.51 4.45
446 530 2.094762 ACACGAAACATAGTCTGCCC 57.905 50.000 0.00 0.00 0.00 5.36
449 533 6.568601 CACGTAAAAACACGAAACATAGTCTG 59.431 38.462 2.26 0.00 44.69 3.51
450 534 6.476380 TCACGTAAAAACACGAAACATAGTCT 59.524 34.615 2.26 0.00 44.69 3.24
451 535 6.567512 GTCACGTAAAAACACGAAACATAGTC 59.432 38.462 2.26 0.00 44.69 2.59
453 537 6.352547 GTGTCACGTAAAAACACGAAACATAG 59.647 38.462 2.26 0.00 44.69 2.23
454 538 6.035866 AGTGTCACGTAAAAACACGAAACATA 59.964 34.615 13.56 0.00 46.11 2.29
455 539 5.023286 GTGTCACGTAAAAACACGAAACAT 58.977 37.500 2.26 0.00 44.69 2.71
456 540 4.152045 AGTGTCACGTAAAAACACGAAACA 59.848 37.500 13.56 3.69 46.11 2.83
457 541 4.640956 AGTGTCACGTAAAAACACGAAAC 58.359 39.130 13.56 1.26 46.11 2.78
458 542 4.388165 TGAGTGTCACGTAAAAACACGAAA 59.612 37.500 13.56 4.89 46.11 3.46
473 557 3.573967 TCTGTAGCAATCAGTGAGTGTCA 59.426 43.478 20.69 15.59 34.86 3.58
474 558 3.923461 GTCTGTAGCAATCAGTGAGTGTC 59.077 47.826 20.69 13.25 34.86 3.67
476 560 4.185467 AGTCTGTAGCAATCAGTGAGTG 57.815 45.455 16.08 16.08 34.86 3.51
479 563 4.871933 TCAAGTCTGTAGCAATCAGTGA 57.128 40.909 0.00 0.00 34.86 3.41
480 564 5.064452 GGAATCAAGTCTGTAGCAATCAGTG 59.936 44.000 0.00 0.00 34.86 3.66
484 568 4.775236 AGGGAATCAAGTCTGTAGCAATC 58.225 43.478 0.00 0.00 0.00 2.67
486 570 3.840666 AGAGGGAATCAAGTCTGTAGCAA 59.159 43.478 0.00 0.00 0.00 3.91
487 571 3.445008 AGAGGGAATCAAGTCTGTAGCA 58.555 45.455 0.00 0.00 0.00 3.49
488 572 3.181470 GGAGAGGGAATCAAGTCTGTAGC 60.181 52.174 0.00 0.00 0.00 3.58
489 573 3.067461 CGGAGAGGGAATCAAGTCTGTAG 59.933 52.174 0.00 0.00 0.00 2.74
490 574 3.024547 CGGAGAGGGAATCAAGTCTGTA 58.975 50.000 0.00 0.00 0.00 2.74
491 575 1.827969 CGGAGAGGGAATCAAGTCTGT 59.172 52.381 0.00 0.00 0.00 3.41
492 576 2.103373 TCGGAGAGGGAATCAAGTCTG 58.897 52.381 0.00 0.00 0.00 3.51
493 577 2.534042 TCGGAGAGGGAATCAAGTCT 57.466 50.000 0.00 0.00 0.00 3.24
494 578 2.804933 GCATCGGAGAGGGAATCAAGTC 60.805 54.545 0.00 0.00 43.63 3.01
495 579 1.139853 GCATCGGAGAGGGAATCAAGT 59.860 52.381 0.00 0.00 43.63 3.16
496 580 1.871408 CGCATCGGAGAGGGAATCAAG 60.871 57.143 0.00 0.00 43.63 3.02
500 584 1.410004 TTACGCATCGGAGAGGGAAT 58.590 50.000 4.67 0.00 43.63 3.01
501 585 1.410004 ATTACGCATCGGAGAGGGAA 58.590 50.000 4.67 0.00 43.63 3.97
502 586 1.410004 AATTACGCATCGGAGAGGGA 58.590 50.000 4.67 0.00 43.63 4.20
503 587 1.867233 CAAATTACGCATCGGAGAGGG 59.133 52.381 0.00 0.00 43.63 4.30
504 588 1.261619 GCAAATTACGCATCGGAGAGG 59.738 52.381 0.00 0.00 43.63 3.69
505 589 2.205074 AGCAAATTACGCATCGGAGAG 58.795 47.619 2.92 0.00 43.63 3.20
506 590 2.201732 GAGCAAATTACGCATCGGAGA 58.798 47.619 2.92 0.00 45.75 3.71
507 591 1.933181 TGAGCAAATTACGCATCGGAG 59.067 47.619 2.92 0.00 0.00 4.63
508 592 2.017138 TGAGCAAATTACGCATCGGA 57.983 45.000 2.92 0.00 0.00 4.55
509 593 2.032054 ACATGAGCAAATTACGCATCGG 59.968 45.455 0.00 0.00 0.00 4.18
510 594 3.323729 ACATGAGCAAATTACGCATCG 57.676 42.857 0.00 0.00 0.00 3.84
511 595 4.731961 CAGAACATGAGCAAATTACGCATC 59.268 41.667 0.00 0.00 0.00 3.91
514 598 2.848302 GCAGAACATGAGCAAATTACGC 59.152 45.455 0.00 0.00 0.00 4.42
515 599 3.119884 TGGCAGAACATGAGCAAATTACG 60.120 43.478 0.00 0.00 0.00 3.18
516 600 4.418392 CTGGCAGAACATGAGCAAATTAC 58.582 43.478 9.42 0.00 0.00 1.89
517 601 3.119388 GCTGGCAGAACATGAGCAAATTA 60.119 43.478 20.86 0.00 30.84 1.40
519 603 1.203994 GCTGGCAGAACATGAGCAAAT 59.796 47.619 20.86 0.00 30.84 2.32
520 604 0.599558 GCTGGCAGAACATGAGCAAA 59.400 50.000 20.86 0.00 30.84 3.68
523 607 2.789917 CGCTGGCAGAACATGAGC 59.210 61.111 20.86 0.00 0.00 4.26
524 608 1.744368 AGCGCTGGCAGAACATGAG 60.744 57.895 20.86 0.73 43.41 2.90
525 609 2.036571 CAGCGCTGGCAGAACATGA 61.037 57.895 29.88 0.00 43.41 3.07
526 610 1.859427 AACAGCGCTGGCAGAACATG 61.859 55.000 38.27 13.24 43.41 3.21
529 613 2.253452 CAACAGCGCTGGCAGAAC 59.747 61.111 38.27 9.03 43.41 3.01
530 614 3.663176 GCAACAGCGCTGGCAGAA 61.663 61.111 38.27 0.00 43.41 3.02
531 615 4.631247 AGCAACAGCGCTGGCAGA 62.631 61.111 38.27 0.00 41.85 4.26
554 638 4.666253 AGCATGGCTGTTGGGCGT 62.666 61.111 0.00 0.00 44.11 5.68
580 669 1.407258 CGGCTGTTGTTCCCTCAAAAA 59.593 47.619 0.00 0.00 0.00 1.94
584 673 1.227823 CACGGCTGTTGTTCCCTCA 60.228 57.895 0.00 0.00 0.00 3.86
586 675 2.594592 GCACGGCTGTTGTTCCCT 60.595 61.111 0.00 0.00 0.00 4.20
587 676 2.594592 AGCACGGCTGTTGTTCCC 60.595 61.111 0.00 0.00 37.57 3.97
602 691 3.352222 AGTCGCAGCAGCAACAGC 61.352 61.111 0.82 0.00 42.27 4.40
603 692 1.296755 ATCAGTCGCAGCAGCAACAG 61.297 55.000 0.82 0.00 42.27 3.16
604 693 1.301953 ATCAGTCGCAGCAGCAACA 60.302 52.632 0.82 0.00 42.27 3.33
606 695 1.004679 TCATCAGTCGCAGCAGCAA 60.005 52.632 0.82 0.00 42.27 3.91
608 697 1.153686 TCTCATCAGTCGCAGCAGC 60.154 57.895 0.00 0.00 37.42 5.25
609 698 0.108945 TGTCTCATCAGTCGCAGCAG 60.109 55.000 0.00 0.00 0.00 4.24
610 699 0.108945 CTGTCTCATCAGTCGCAGCA 60.109 55.000 0.00 0.00 0.00 4.41
611 700 0.108898 ACTGTCTCATCAGTCGCAGC 60.109 55.000 0.00 0.00 44.07 5.25
612 701 3.370276 CATACTGTCTCATCAGTCGCAG 58.630 50.000 2.59 0.00 45.79 5.18
614 703 2.123342 GCATACTGTCTCATCAGTCGC 58.877 52.381 2.59 4.46 45.79 5.19
615 704 2.360483 AGGCATACTGTCTCATCAGTCG 59.640 50.000 2.59 0.00 45.79 4.18
617 706 2.433604 CCAGGCATACTGTCTCATCAGT 59.566 50.000 4.79 4.79 46.06 3.41
618 707 2.806019 GCCAGGCATACTGTCTCATCAG 60.806 54.545 6.55 0.00 46.06 2.90
619 708 1.139654 GCCAGGCATACTGTCTCATCA 59.860 52.381 6.55 0.00 46.06 3.07
620 709 1.542108 GGCCAGGCATACTGTCTCATC 60.542 57.143 15.19 0.00 46.06 2.92
622 711 1.626356 GGGCCAGGCATACTGTCTCA 61.626 60.000 15.19 0.00 46.06 3.27
624 713 2.735772 CGGGCCAGGCATACTGTCT 61.736 63.158 15.19 0.00 46.06 3.41
625 714 2.203070 CGGGCCAGGCATACTGTC 60.203 66.667 15.19 0.00 46.06 3.51
626 715 3.009115 ACGGGCCAGGCATACTGT 61.009 61.111 15.19 4.09 46.06 3.55
628 717 2.687200 TCACGGGCCAGGCATACT 60.687 61.111 15.19 0.00 0.00 2.12
629 718 2.513897 GTCACGGGCCAGGCATAC 60.514 66.667 15.19 1.44 0.00 2.39
630 719 4.155733 CGTCACGGGCCAGGCATA 62.156 66.667 15.19 0.00 0.00 3.14
648 737 1.153168 AGACGTATGTGGGCCATGC 60.153 57.895 10.70 0.00 34.86 4.06
649 738 0.532862 GGAGACGTATGTGGGCCATG 60.533 60.000 10.70 0.00 34.86 3.66
650 739 1.830145 GGAGACGTATGTGGGCCAT 59.170 57.895 10.70 0.00 37.58 4.40
651 740 3.305314 GGAGACGTATGTGGGCCA 58.695 61.111 0.00 0.00 0.00 5.36
663 752 5.667466 TGAAGTAATAAATGGGACGGAGAC 58.333 41.667 0.00 0.00 0.00 3.36
664 753 5.943349 TGAAGTAATAAATGGGACGGAGA 57.057 39.130 0.00 0.00 0.00 3.71
665 754 6.113411 AGTTGAAGTAATAAATGGGACGGAG 58.887 40.000 0.00 0.00 0.00 4.63
666 755 6.057321 AGTTGAAGTAATAAATGGGACGGA 57.943 37.500 0.00 0.00 0.00 4.69
667 756 5.006358 CGAGTTGAAGTAATAAATGGGACGG 59.994 44.000 0.00 0.00 0.00 4.79
668 757 5.579511 ACGAGTTGAAGTAATAAATGGGACG 59.420 40.000 0.00 0.00 0.00 4.79
669 758 6.183360 CCACGAGTTGAAGTAATAAATGGGAC 60.183 42.308 0.00 0.00 0.00 4.46
670 759 5.878116 CCACGAGTTGAAGTAATAAATGGGA 59.122 40.000 0.00 0.00 0.00 4.37
671 760 5.646360 ACCACGAGTTGAAGTAATAAATGGG 59.354 40.000 0.00 0.00 0.00 4.00
672 761 6.737254 ACCACGAGTTGAAGTAATAAATGG 57.263 37.500 0.00 0.00 0.00 3.16
681 770 4.184079 GTACCATACCACGAGTTGAAGT 57.816 45.455 0.00 0.00 0.00 3.01
732 821 4.306600 GTTTTGGACTTTTGGTAGCCATG 58.693 43.478 0.00 0.00 31.53 3.66
735 824 2.696187 TGGTTTTGGACTTTTGGTAGCC 59.304 45.455 0.00 0.00 0.00 3.93
736 825 4.116961 GTTGGTTTTGGACTTTTGGTAGC 58.883 43.478 0.00 0.00 0.00 3.58
737 826 5.106442 GTGTTGGTTTTGGACTTTTGGTAG 58.894 41.667 0.00 0.00 0.00 3.18
738 827 4.380655 CGTGTTGGTTTTGGACTTTTGGTA 60.381 41.667 0.00 0.00 0.00 3.25
739 828 3.615351 CGTGTTGGTTTTGGACTTTTGGT 60.615 43.478 0.00 0.00 0.00 3.67
740 829 2.926838 CGTGTTGGTTTTGGACTTTTGG 59.073 45.455 0.00 0.00 0.00 3.28
741 830 2.926838 CCGTGTTGGTTTTGGACTTTTG 59.073 45.455 0.00 0.00 0.00 2.44
742 831 2.826725 TCCGTGTTGGTTTTGGACTTTT 59.173 40.909 0.00 0.00 39.52 2.27
743 832 2.164827 GTCCGTGTTGGTTTTGGACTTT 59.835 45.455 2.57 0.00 44.47 2.66
744 833 1.746787 GTCCGTGTTGGTTTTGGACTT 59.253 47.619 2.57 0.00 44.47 3.01
745 834 1.385528 GTCCGTGTTGGTTTTGGACT 58.614 50.000 2.57 0.00 44.47 3.85
746 835 3.930400 GTCCGTGTTGGTTTTGGAC 57.070 52.632 0.00 0.00 41.98 4.02
747 836 1.096416 GTGTCCGTGTTGGTTTTGGA 58.904 50.000 0.00 0.00 39.52 3.53
748 837 0.811915 TGTGTCCGTGTTGGTTTTGG 59.188 50.000 0.00 0.00 39.52 3.28
749 838 1.202245 CCTGTGTCCGTGTTGGTTTTG 60.202 52.381 0.00 0.00 39.52 2.44
750 839 1.099689 CCTGTGTCCGTGTTGGTTTT 58.900 50.000 0.00 0.00 39.52 2.43
787 880 7.008021 ACCTAAGTTAATTTCCTCGGTGTTA 57.992 36.000 0.00 0.00 0.00 2.41
803 896 4.080186 ACCCAATACGGCAATACCTAAGTT 60.080 41.667 0.00 0.00 35.61 2.66
1056 1162 2.265904 ACGCCTACTGCACTCGACA 61.266 57.895 0.00 0.00 41.33 4.35
1087 1193 1.079127 CGGTGAGGCAACCCACTAG 60.079 63.158 4.03 0.00 36.84 2.57
1089 1195 3.168528 ACGGTGAGGCAACCCACT 61.169 61.111 4.03 0.00 36.84 4.00
1206 1312 1.538047 GGGCAAAGCAGAATGAGACA 58.462 50.000 0.00 0.00 39.69 3.41
1212 1318 0.610232 AAGAGCGGGCAAAGCAGAAT 60.610 50.000 0.00 0.00 37.01 2.40
1254 1360 2.922950 GCCGTGGTACCACTCGACA 61.923 63.158 35.83 2.38 44.16 4.35
1255 1361 2.126189 GCCGTGGTACCACTCGAC 60.126 66.667 35.83 21.28 44.16 4.20
1354 1467 4.580995 TGCATCTACAAAACCTCGGAAAAA 59.419 37.500 0.00 0.00 0.00 1.94
1359 1472 4.442706 ACTATGCATCTACAAAACCTCGG 58.557 43.478 0.19 0.00 0.00 4.63
1360 1473 6.092122 TCAAACTATGCATCTACAAAACCTCG 59.908 38.462 0.19 0.00 0.00 4.63
1461 1587 9.409312 CTCATTGCACATACAAAGAATTAAACA 57.591 29.630 0.00 0.00 32.27 2.83
1513 1727 2.032030 AGCGTGGTGTTCATCGAAAAAG 60.032 45.455 0.00 0.00 0.00 2.27
1645 1872 8.983702 ACTCTAAGAGGACTACCATTTAGTAG 57.016 38.462 0.00 0.00 38.80 2.57
1665 1892 5.903198 TCATGAGATGGAGAGAGACTCTA 57.097 43.478 4.57 0.00 41.35 2.43
1685 1912 4.777366 TCCTCTTGTTGTGTCCAGATATCA 59.223 41.667 5.32 0.00 0.00 2.15
1731 1961 4.217550 GGTGTTAGCTTAATTGTCTTGCCA 59.782 41.667 0.00 0.00 0.00 4.92
1748 1978 0.608130 ATGCTGCGTGAGAGGTGTTA 59.392 50.000 0.00 0.00 0.00 2.41
1781 2011 2.869233 AATCAGTGGTGTTTGTGTGC 57.131 45.000 0.00 0.00 0.00 4.57
2025 2255 4.208686 GGGGGCGAGACTGTAGCG 62.209 72.222 0.00 0.00 0.00 4.26
2026 2256 3.075005 TGGGGGCGAGACTGTAGC 61.075 66.667 0.00 0.00 0.00 3.58
2027 2257 2.427245 CCTGGGGGCGAGACTGTAG 61.427 68.421 0.00 0.00 0.00 2.74
2028 2258 2.363795 CCTGGGGGCGAGACTGTA 60.364 66.667 0.00 0.00 0.00 2.74
2029 2259 4.316823 TCCTGGGGGCGAGACTGT 62.317 66.667 0.00 0.00 0.00 3.55
2030 2260 3.775654 GTCCTGGGGGCGAGACTG 61.776 72.222 0.00 0.00 0.00 3.51
2031 2261 3.625632 ATGTCCTGGGGGCGAGACT 62.626 63.158 0.00 0.00 0.00 3.24
2032 2262 2.670148 AATGTCCTGGGGGCGAGAC 61.670 63.158 0.00 0.00 0.00 3.36
2033 2263 2.285368 AATGTCCTGGGGGCGAGA 60.285 61.111 0.00 0.00 0.00 4.04
2034 2264 2.124570 CAATGTCCTGGGGGCGAG 60.125 66.667 0.00 0.00 0.00 5.03
2035 2265 1.784301 TTTCAATGTCCTGGGGGCGA 61.784 55.000 0.00 0.00 0.00 5.54
2036 2266 0.684153 ATTTCAATGTCCTGGGGGCG 60.684 55.000 0.00 0.00 0.00 6.13
2037 2267 1.114627 GATTTCAATGTCCTGGGGGC 58.885 55.000 0.00 0.00 0.00 5.80
2038 2268 1.780503 GGATTTCAATGTCCTGGGGG 58.219 55.000 0.00 0.00 0.00 5.40
2039 2269 1.392589 CGGATTTCAATGTCCTGGGG 58.607 55.000 0.00 0.00 32.19 4.96
2040 2270 0.740737 GCGGATTTCAATGTCCTGGG 59.259 55.000 0.00 0.00 32.19 4.45
2041 2271 0.740737 GGCGGATTTCAATGTCCTGG 59.259 55.000 0.00 0.00 32.19 4.45
2042 2272 0.378257 CGGCGGATTTCAATGTCCTG 59.622 55.000 0.00 0.00 32.19 3.86
2043 2273 0.251916 TCGGCGGATTTCAATGTCCT 59.748 50.000 7.21 0.00 32.19 3.85
2044 2274 1.308998 ATCGGCGGATTTCAATGTCC 58.691 50.000 7.21 0.00 0.00 4.02
2045 2275 2.599848 CGAATCGGCGGATTTCAATGTC 60.600 50.000 19.20 5.55 42.86 3.06
2046 2276 1.330521 CGAATCGGCGGATTTCAATGT 59.669 47.619 19.20 0.00 42.86 2.71
2047 2277 2.022808 CGAATCGGCGGATTTCAATG 57.977 50.000 19.20 5.63 42.86 2.82
2060 2290 1.154112 CCAAAAACGGGCCGAATCG 60.154 57.895 35.78 15.97 0.00 3.34
2061 2291 1.214325 CCCAAAAACGGGCCGAATC 59.786 57.895 35.78 0.00 40.07 2.52
2062 2292 3.372123 CCCAAAAACGGGCCGAAT 58.628 55.556 35.78 18.49 40.07 3.34
2124 2354 3.894547 TTTCCTTGCGCCGGAGTCC 62.895 63.158 5.05 0.00 0.00 3.85
2125 2355 1.512156 TTTTTCCTTGCGCCGGAGTC 61.512 55.000 5.05 0.00 0.00 3.36
2126 2356 1.515521 CTTTTTCCTTGCGCCGGAGT 61.516 55.000 5.05 0.00 0.00 3.85
2127 2357 1.210155 CTTTTTCCTTGCGCCGGAG 59.790 57.895 5.05 1.55 0.00 4.63
2128 2358 2.914908 GCTTTTTCCTTGCGCCGGA 61.915 57.895 5.05 8.40 0.00 5.14
2129 2359 2.430751 GCTTTTTCCTTGCGCCGG 60.431 61.111 4.18 5.57 0.00 6.13
2130 2360 2.016165 GTGCTTTTTCCTTGCGCCG 61.016 57.895 4.18 0.00 0.00 6.46
2131 2361 2.016165 CGTGCTTTTTCCTTGCGCC 61.016 57.895 4.18 0.00 34.16 6.53
2132 2362 1.268778 GACGTGCTTTTTCCTTGCGC 61.269 55.000 0.00 0.00 0.00 6.09
2133 2363 0.307760 AGACGTGCTTTTTCCTTGCG 59.692 50.000 0.00 0.00 0.00 4.85
2134 2364 1.600413 CCAGACGTGCTTTTTCCTTGC 60.600 52.381 0.00 0.00 0.00 4.01
2135 2365 1.600413 GCCAGACGTGCTTTTTCCTTG 60.600 52.381 0.00 0.00 0.00 3.61
2136 2366 0.668535 GCCAGACGTGCTTTTTCCTT 59.331 50.000 0.00 0.00 0.00 3.36
2137 2367 1.172812 GGCCAGACGTGCTTTTTCCT 61.173 55.000 0.00 0.00 0.00 3.36
2138 2368 1.285950 GGCCAGACGTGCTTTTTCC 59.714 57.895 0.00 0.00 0.00 3.13
2139 2369 1.285950 GGGCCAGACGTGCTTTTTC 59.714 57.895 4.39 0.00 0.00 2.29
2140 2370 1.454847 TGGGCCAGACGTGCTTTTT 60.455 52.632 0.00 0.00 0.00 1.94
2141 2371 2.193536 GTGGGCCAGACGTGCTTTT 61.194 57.895 6.40 0.00 0.00 2.27
2142 2372 2.594592 GTGGGCCAGACGTGCTTT 60.595 61.111 6.40 0.00 0.00 3.51
2143 2373 3.872603 TGTGGGCCAGACGTGCTT 61.873 61.111 6.40 0.00 0.00 3.91
2144 2374 4.626081 GTGTGGGCCAGACGTGCT 62.626 66.667 18.82 0.00 0.00 4.40
2146 2376 3.551496 ATGGTGTGGGCCAGACGTG 62.551 63.158 25.50 0.00 42.47 4.49
2147 2377 3.249189 ATGGTGTGGGCCAGACGT 61.249 61.111 25.50 15.03 42.47 4.34
2148 2378 2.436646 GATGGTGTGGGCCAGACG 60.437 66.667 25.50 0.00 42.47 4.18
2149 2379 1.377725 CTGATGGTGTGGGCCAGAC 60.378 63.158 24.73 24.73 42.47 3.51
2150 2380 2.605607 CCTGATGGTGTGGGCCAGA 61.606 63.158 6.40 0.99 42.47 3.86
2151 2381 2.044650 CCTGATGGTGTGGGCCAG 60.045 66.667 6.40 0.00 42.47 4.85
2152 2382 4.365111 GCCTGATGGTGTGGGCCA 62.365 66.667 0.00 0.00 43.48 5.36
2154 2384 3.918253 TTCGCCTGATGGTGTGGGC 62.918 63.158 0.00 0.00 43.94 5.36
2155 2385 0.893270 TTTTCGCCTGATGGTGTGGG 60.893 55.000 0.00 0.00 43.94 4.61
2156 2386 0.523072 CTTTTCGCCTGATGGTGTGG 59.477 55.000 0.00 0.00 43.94 4.17
2157 2387 1.197721 GACTTTTCGCCTGATGGTGTG 59.802 52.381 0.00 0.00 43.94 3.82
2158 2388 1.202758 TGACTTTTCGCCTGATGGTGT 60.203 47.619 0.00 0.00 43.94 4.16
2159 2389 1.522668 TGACTTTTCGCCTGATGGTG 58.477 50.000 0.00 0.00 44.86 4.17
2160 2390 2.154462 CTTGACTTTTCGCCTGATGGT 58.846 47.619 0.00 0.00 35.27 3.55
2161 2391 1.135575 GCTTGACTTTTCGCCTGATGG 60.136 52.381 0.00 0.00 0.00 3.51
2162 2392 1.536766 TGCTTGACTTTTCGCCTGATG 59.463 47.619 0.00 0.00 0.00 3.07
2163 2393 1.896220 TGCTTGACTTTTCGCCTGAT 58.104 45.000 0.00 0.00 0.00 2.90
2164 2394 1.536766 CATGCTTGACTTTTCGCCTGA 59.463 47.619 0.00 0.00 0.00 3.86
2165 2395 1.267806 ACATGCTTGACTTTTCGCCTG 59.732 47.619 6.60 0.00 0.00 4.85
2166 2396 1.537202 GACATGCTTGACTTTTCGCCT 59.463 47.619 6.60 0.00 0.00 5.52
2167 2397 1.537202 AGACATGCTTGACTTTTCGCC 59.463 47.619 6.60 0.00 0.00 5.54
2168 2398 2.977405 AGACATGCTTGACTTTTCGC 57.023 45.000 6.60 0.00 0.00 4.70
2169 2399 3.250762 TGGAAGACATGCTTGACTTTTCG 59.749 43.478 16.06 0.00 37.85 3.46
2170 2400 4.516698 TCTGGAAGACATGCTTGACTTTTC 59.483 41.667 16.06 12.54 38.67 2.29
2171 2401 4.464008 TCTGGAAGACATGCTTGACTTTT 58.536 39.130 16.06 0.00 38.67 2.27
2172 2402 4.090761 TCTGGAAGACATGCTTGACTTT 57.909 40.909 16.06 3.94 38.67 2.66
2173 2403 3.777106 TCTGGAAGACATGCTTGACTT 57.223 42.857 15.17 15.17 38.67 3.01
2186 2416 0.462759 GTGGGAGGCGAATCTGGAAG 60.463 60.000 0.00 0.00 0.00 3.46
2187 2417 1.602237 GTGGGAGGCGAATCTGGAA 59.398 57.895 0.00 0.00 0.00 3.53
2188 2418 2.367202 GGTGGGAGGCGAATCTGGA 61.367 63.158 0.00 0.00 0.00 3.86
2189 2419 2.190578 GGTGGGAGGCGAATCTGG 59.809 66.667 0.00 0.00 0.00 3.86
2190 2420 2.190578 GGGTGGGAGGCGAATCTG 59.809 66.667 0.00 0.00 0.00 2.90
2191 2421 3.090532 GGGGTGGGAGGCGAATCT 61.091 66.667 0.00 0.00 0.00 2.40
2192 2422 4.191015 GGGGGTGGGAGGCGAATC 62.191 72.222 0.00 0.00 0.00 2.52
2224 2454 4.856801 CCGGGATCAGCCGGTTGG 62.857 72.222 18.99 1.30 43.67 3.77
2249 2479 3.958147 CTAGCGGTGGTGGGCAGTG 62.958 68.421 0.00 0.00 0.00 3.66
2250 2480 3.706373 CTAGCGGTGGTGGGCAGT 61.706 66.667 0.00 0.00 0.00 4.40
2251 2481 2.257409 AATCTAGCGGTGGTGGGCAG 62.257 60.000 0.00 0.00 0.00 4.85
2252 2482 2.297895 AATCTAGCGGTGGTGGGCA 61.298 57.895 0.00 0.00 0.00 5.36
2253 2483 1.819632 CAATCTAGCGGTGGTGGGC 60.820 63.158 0.00 0.00 0.00 5.36
2254 2484 1.819632 GCAATCTAGCGGTGGTGGG 60.820 63.158 0.00 0.00 0.00 4.61
2255 2485 1.819632 GGCAATCTAGCGGTGGTGG 60.820 63.158 0.00 0.00 34.64 4.61
2256 2486 1.819632 GGGCAATCTAGCGGTGGTG 60.820 63.158 0.00 0.00 34.64 4.17
2257 2487 1.635817 ATGGGCAATCTAGCGGTGGT 61.636 55.000 0.00 0.00 34.64 4.16
2258 2488 0.466189 AATGGGCAATCTAGCGGTGG 60.466 55.000 0.00 0.00 34.64 4.61
2259 2489 0.947244 GAATGGGCAATCTAGCGGTG 59.053 55.000 0.00 0.00 34.64 4.94
2260 2490 0.179018 GGAATGGGCAATCTAGCGGT 60.179 55.000 0.00 0.00 34.64 5.68
2261 2491 0.890996 GGGAATGGGCAATCTAGCGG 60.891 60.000 0.00 0.00 34.64 5.52
2262 2492 0.890996 GGGGAATGGGCAATCTAGCG 60.891 60.000 0.00 0.00 34.64 4.26
2263 2493 0.890996 CGGGGAATGGGCAATCTAGC 60.891 60.000 0.00 0.00 0.00 3.42
2264 2494 0.890996 GCGGGGAATGGGCAATCTAG 60.891 60.000 0.00 0.00 0.00 2.43
2265 2495 1.150536 GCGGGGAATGGGCAATCTA 59.849 57.895 0.00 0.00 0.00 1.98
2266 2496 2.123726 GCGGGGAATGGGCAATCT 60.124 61.111 0.00 0.00 0.00 2.40
2267 2497 3.226537 GGCGGGGAATGGGCAATC 61.227 66.667 0.00 0.00 0.00 2.67
2273 2503 2.834034 CTTTTTGCGGCGGGGAATGG 62.834 60.000 9.78 0.00 0.00 3.16
2274 2504 1.445926 CTTTTTGCGGCGGGGAATG 60.446 57.895 9.78 0.00 0.00 2.67
2275 2505 1.595093 CTCTTTTTGCGGCGGGGAAT 61.595 55.000 9.78 0.00 0.00 3.01
2276 2506 2.203365 TCTTTTTGCGGCGGGGAA 60.203 55.556 9.78 0.00 0.00 3.97
2277 2507 2.671619 CTCTTTTTGCGGCGGGGA 60.672 61.111 9.78 0.00 0.00 4.81
2278 2508 4.419939 GCTCTTTTTGCGGCGGGG 62.420 66.667 9.78 0.00 0.00 5.73
2279 2509 3.615536 CTGCTCTTTTTGCGGCGGG 62.616 63.158 9.78 0.00 0.00 6.13
2280 2510 2.126734 CTGCTCTTTTTGCGGCGG 60.127 61.111 9.78 0.00 0.00 6.13
2281 2511 1.154338 CTCTGCTCTTTTTGCGGCG 60.154 57.895 0.51 0.51 36.79 6.46
2282 2512 1.211190 CCTCTGCTCTTTTTGCGGC 59.789 57.895 0.00 0.00 36.79 6.53
2283 2513 0.954452 AACCTCTGCTCTTTTTGCGG 59.046 50.000 0.00 0.00 38.10 5.69
2284 2514 1.334869 ACAACCTCTGCTCTTTTTGCG 59.665 47.619 0.00 0.00 0.00 4.85
2285 2515 2.735823 CACAACCTCTGCTCTTTTTGC 58.264 47.619 0.00 0.00 0.00 3.68
2286 2516 2.544486 GGCACAACCTCTGCTCTTTTTG 60.544 50.000 0.00 0.00 34.84 2.44
2287 2517 1.683385 GGCACAACCTCTGCTCTTTTT 59.317 47.619 0.00 0.00 34.84 1.94
2288 2518 1.322442 GGCACAACCTCTGCTCTTTT 58.678 50.000 0.00 0.00 34.84 2.27
2289 2519 0.886490 CGGCACAACCTCTGCTCTTT 60.886 55.000 0.00 0.00 34.84 2.52
2290 2520 1.302033 CGGCACAACCTCTGCTCTT 60.302 57.895 0.00 0.00 34.84 2.85
2291 2521 2.164865 CTCGGCACAACCTCTGCTCT 62.165 60.000 0.00 0.00 34.84 4.09
2292 2522 1.739562 CTCGGCACAACCTCTGCTC 60.740 63.158 0.00 0.00 34.84 4.26
2293 2523 2.345244 CTCGGCACAACCTCTGCT 59.655 61.111 0.00 0.00 34.84 4.24
2294 2524 2.731691 TTCCTCGGCACAACCTCTGC 62.732 60.000 0.00 0.00 35.61 4.26
2295 2525 0.671781 CTTCCTCGGCACAACCTCTG 60.672 60.000 0.00 0.00 35.61 3.35
2296 2526 1.674057 CTTCCTCGGCACAACCTCT 59.326 57.895 0.00 0.00 35.61 3.69
2297 2527 2.035442 GCTTCCTCGGCACAACCTC 61.035 63.158 0.00 0.00 35.61 3.85
2298 2528 2.032681 GCTTCCTCGGCACAACCT 59.967 61.111 0.00 0.00 35.61 3.50
2299 2529 2.180159 TAGGCTTCCTCGGCACAACC 62.180 60.000 0.00 0.00 34.61 3.77
2300 2530 1.019805 GTAGGCTTCCTCGGCACAAC 61.020 60.000 0.00 0.00 34.61 3.32
2301 2531 1.192146 AGTAGGCTTCCTCGGCACAA 61.192 55.000 0.00 0.00 34.61 3.33
2302 2532 1.609501 AGTAGGCTTCCTCGGCACA 60.610 57.895 0.00 0.00 34.61 4.57
2303 2533 1.153549 CAGTAGGCTTCCTCGGCAC 60.154 63.158 0.00 0.00 34.61 5.01
2304 2534 3.019003 GCAGTAGGCTTCCTCGGCA 62.019 63.158 0.00 0.00 40.25 5.69
2305 2535 2.202946 GCAGTAGGCTTCCTCGGC 60.203 66.667 0.00 0.00 40.25 5.54
2306 2536 0.531532 CATGCAGTAGGCTTCCTCGG 60.532 60.000 0.00 0.00 45.15 4.63
2307 2537 1.156645 GCATGCAGTAGGCTTCCTCG 61.157 60.000 14.21 0.00 45.15 4.63
2308 2538 0.179936 AGCATGCAGTAGGCTTCCTC 59.820 55.000 21.98 0.00 45.64 3.71
2309 2539 2.305095 AGCATGCAGTAGGCTTCCT 58.695 52.632 21.98 0.00 45.64 3.36
2310 2540 4.972875 AGCATGCAGTAGGCTTCC 57.027 55.556 21.98 0.00 45.64 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.