Multiple sequence alignment - TraesCS4A01G412800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G412800 chr4A 100.000 2007 0 0 1 2007 684450316 684448310 0.000000e+00 3707.0
1 TraesCS4A01G412800 chr4A 90.896 703 39 14 905 1596 684471050 684471738 0.000000e+00 920.0
2 TraesCS4A01G412800 chr4A 95.580 181 7 1 492 672 684470862 684471041 3.120000e-74 289.0
3 TraesCS4A01G412800 chr4A 100.000 150 0 0 2328 2477 684447989 684447840 6.750000e-71 278.0
4 TraesCS4A01G412800 chr4A 81.481 216 30 6 124 330 674359842 674359628 4.240000e-38 169.0
5 TraesCS4A01G412800 chr4A 78.804 184 27 7 161 334 657487864 657488045 2.010000e-21 113.0
6 TraesCS4A01G412800 chr4B 89.401 868 68 16 904 1759 603148319 603149174 0.000000e+00 1072.0
7 TraesCS4A01G412800 chr4B 86.171 875 77 27 904 1754 602893707 602892853 0.000000e+00 905.0
8 TraesCS4A01G412800 chr4B 85.214 886 86 25 903 1764 602873787 602872923 0.000000e+00 869.0
9 TraesCS4A01G412800 chr4B 90.578 658 44 11 904 1556 603037901 603038545 0.000000e+00 856.0
10 TraesCS4A01G412800 chr4B 88.283 623 53 10 911 1528 603026251 603025644 0.000000e+00 728.0
11 TraesCS4A01G412800 chr4B 82.749 742 71 28 2 695 603147595 603148327 2.110000e-170 608.0
12 TraesCS4A01G412800 chr4B 83.559 590 56 15 114 672 603037314 603037893 4.720000e-142 514.0
13 TraesCS4A01G412800 chr4B 90.196 204 16 2 492 695 603145290 603145091 1.890000e-66 263.0
14 TraesCS4A01G412800 chr4B 90.210 143 8 3 1632 1772 603023643 603023505 5.440000e-42 182.0
15 TraesCS4A01G412800 chr4B 89.362 141 9 3 1634 1772 603143680 603143544 3.280000e-39 172.0
16 TraesCS4A01G412800 chr4B 92.105 76 4 1 1785 1860 603143561 603143488 3.370000e-19 106.0
17 TraesCS4A01G412800 chr4B 92.308 52 4 0 1803 1854 602872919 602872868 9.500000e-10 75.0
18 TraesCS4A01G412800 chr4D 93.113 697 33 7 904 1596 477558888 477559573 0.000000e+00 1007.0
19 TraesCS4A01G412800 chr4D 85.095 899 80 28 905 1772 477543662 477542787 0.000000e+00 869.0
20 TraesCS4A01G412800 chr4D 83.815 692 65 17 34 691 477558214 477558892 4.530000e-172 614.0
21 TraesCS4A01G412800 chr4D 93.182 176 12 0 497 672 477543846 477543671 2.440000e-65 259.0
22 TraesCS4A01G412800 chr1B 85.557 637 65 16 904 1528 401992516 401991895 2.080000e-180 641.0
23 TraesCS4A01G412800 chr1B 74.074 216 42 10 131 335 685279479 685279267 2.640000e-10 76.8
24 TraesCS4A01G412800 chr6A 92.891 211 12 3 696 903 384090073 384090283 1.110000e-78 303.0
25 TraesCS4A01G412800 chr6A 90.566 212 17 3 695 903 10139287 10139076 6.750000e-71 278.0
26 TraesCS4A01G412800 chr6A 80.693 202 24 10 146 335 412366278 412366476 2.570000e-30 143.0
27 TraesCS4A01G412800 chr5A 91.244 217 12 7 692 904 326431818 326431605 3.120000e-74 289.0
28 TraesCS4A01G412800 chr7A 89.177 231 17 8 679 903 303434444 303434216 5.220000e-72 281.0
29 TraesCS4A01G412800 chr7A 89.862 217 17 5 692 905 300472871 300473085 8.730000e-70 274.0
30 TraesCS4A01G412800 chr7A 89.815 216 18 4 696 908 372648179 372648393 8.730000e-70 274.0
31 TraesCS4A01G412800 chr7A 82.143 140 19 6 201 335 520507953 520508091 5.600000e-22 115.0
32 TraesCS4A01G412800 chr3B 90.995 211 15 4 696 903 62672649 62672440 5.220000e-72 281.0
33 TraesCS4A01G412800 chr3A 90.566 212 16 4 695 903 394381995 394382205 6.750000e-71 278.0
34 TraesCS4A01G412800 chr2A 90.566 212 16 4 695 903 24442280 24442490 6.750000e-71 278.0
35 TraesCS4A01G412800 chr2A 76.800 250 38 12 133 366 68244323 68244078 3.350000e-24 122.0
36 TraesCS4A01G412800 chr2B 81.308 214 27 8 128 330 45740946 45740735 7.090000e-36 161.0
37 TraesCS4A01G412800 chr2D 81.579 190 20 9 155 334 34682319 34682503 2.570000e-30 143.0
38 TraesCS4A01G412800 chr6D 80.233 172 21 9 154 314 304115594 304115763 1.560000e-22 117.0
39 TraesCS4A01G412800 chr3D 78.238 193 28 9 155 334 423665752 423665943 7.240000e-21 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G412800 chr4A 684447840 684450316 2476 True 1992.5 3707 100.0000 1 2477 2 chr4A.!!$R2 2476
1 TraesCS4A01G412800 chr4A 684470862 684471738 876 False 604.5 920 93.2380 492 1596 2 chr4A.!!$F2 1104
2 TraesCS4A01G412800 chr4B 602892853 602893707 854 True 905.0 905 86.1710 904 1754 1 chr4B.!!$R1 850
3 TraesCS4A01G412800 chr4B 603147595 603149174 1579 False 840.0 1072 86.0750 2 1759 2 chr4B.!!$F2 1757
4 TraesCS4A01G412800 chr4B 603037314 603038545 1231 False 685.0 856 87.0685 114 1556 2 chr4B.!!$F1 1442
5 TraesCS4A01G412800 chr4B 602872868 602873787 919 True 472.0 869 88.7610 903 1854 2 chr4B.!!$R2 951
6 TraesCS4A01G412800 chr4B 603023505 603026251 2746 True 455.0 728 89.2465 911 1772 2 chr4B.!!$R3 861
7 TraesCS4A01G412800 chr4D 477558214 477559573 1359 False 810.5 1007 88.4640 34 1596 2 chr4D.!!$F1 1562
8 TraesCS4A01G412800 chr4D 477542787 477543846 1059 True 564.0 869 89.1385 497 1772 2 chr4D.!!$R1 1275
9 TraesCS4A01G412800 chr1B 401991895 401992516 621 True 641.0 641 85.5570 904 1528 1 chr1B.!!$R1 624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
900 961 0.03779 GAGAAGCAGGCAAGTCTCGT 60.038 55.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1940 3968 0.03467 AGATTTCCTCAGCCAGCCAC 60.035 55.0 0.0 0.0 0.0 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 41 2.957006 AGATAACATCGTTCTAGCCGGT 59.043 45.455 1.90 0.00 0.00 5.28
41 45 1.135083 ACATCGTTCTAGCCGGTTCAG 60.135 52.381 1.90 0.00 0.00 3.02
69 88 4.141711 GGTCTCACATGGAGGTAGCATAAA 60.142 45.833 10.23 0.00 44.19 1.40
71 90 4.716784 TCTCACATGGAGGTAGCATAAACT 59.283 41.667 10.23 0.00 44.19 2.66
87 106 2.736144 AACTTCGATGTCGGCTTACA 57.264 45.000 4.21 0.00 40.29 2.41
96 115 1.758280 TGTCGGCTTACATTCCGGTAT 59.242 47.619 0.00 0.00 45.31 2.73
107 126 1.502690 TTCCGGTATGGTGGCTATGT 58.497 50.000 0.00 0.00 39.52 2.29
109 128 0.468226 CCGGTATGGTGGCTATGTGT 59.532 55.000 0.00 0.00 0.00 3.72
111 130 1.134521 CGGTATGGTGGCTATGTGTGT 60.135 52.381 0.00 0.00 0.00 3.72
145 170 5.233083 TGGCCTCCACTATAAATCTGATG 57.767 43.478 3.32 0.00 0.00 3.07
224 256 1.453155 AGTTTAGTTGGCGAGCATGG 58.547 50.000 0.00 0.00 0.00 3.66
232 264 2.123428 GGCGAGCATGGCAAATCCT 61.123 57.895 0.00 0.00 43.90 3.24
233 265 1.358046 GCGAGCATGGCAAATCCTC 59.642 57.895 0.00 0.00 40.68 3.71
234 266 1.099879 GCGAGCATGGCAAATCCTCT 61.100 55.000 0.00 0.00 40.68 3.69
235 267 1.386533 CGAGCATGGCAAATCCTCTT 58.613 50.000 0.00 0.00 35.26 2.85
241 273 3.428589 GCATGGCAAATCCTCTTCAGTTC 60.429 47.826 0.00 0.00 35.26 3.01
242 274 2.426522 TGGCAAATCCTCTTCAGTTCG 58.573 47.619 0.00 0.00 35.26 3.95
247 279 5.281727 GCAAATCCTCTTCAGTTCGTTTTT 58.718 37.500 0.00 0.00 0.00 1.94
271 304 6.586868 TTCAAAAATTACTGTGCTTGCAAG 57.413 33.333 22.44 22.44 0.00 4.01
272 305 5.659463 TCAAAAATTACTGTGCTTGCAAGT 58.341 33.333 26.55 10.69 0.00 3.16
290 323 6.913873 GCAAGTTAAATTTGCCATCATCAT 57.086 33.333 12.62 0.00 43.88 2.45
300 333 8.771920 AATTTGCCATCATCATGCAATATAAG 57.228 30.769 0.00 0.00 30.83 1.73
330 363 9.811995 CCATGAAAAATGTCAGATTTATCATGT 57.188 29.630 20.14 0.00 0.00 3.21
338 371 7.987268 TGTCAGATTTATCATGTCTAACGTC 57.013 36.000 0.00 0.00 0.00 4.34
339 372 7.772166 TGTCAGATTTATCATGTCTAACGTCT 58.228 34.615 0.00 0.00 0.00 4.18
340 373 7.702348 TGTCAGATTTATCATGTCTAACGTCTG 59.298 37.037 16.13 16.13 0.00 3.51
342 375 8.633561 TCAGATTTATCATGTCTAACGTCTGAT 58.366 33.333 18.30 0.00 34.98 2.90
356 396 6.937436 AACGTCTGATTTTTAGGTGTTTCT 57.063 33.333 0.00 0.00 0.00 2.52
377 417 9.788960 GTTTCTGATTATTATTTCCTTGTCCAC 57.211 33.333 0.00 0.00 0.00 4.02
384 424 3.842925 TTCCTTGTCCACTGCGCCC 62.843 63.158 4.18 0.00 0.00 6.13
424 471 0.613260 TCCAAGCGCTCACACCTTAT 59.387 50.000 12.06 0.00 0.00 1.73
426 473 1.398390 CCAAGCGCTCACACCTTATTC 59.602 52.381 12.06 0.00 0.00 1.75
439 486 5.705441 CACACCTTATTCCTCAACTTGCTTA 59.295 40.000 0.00 0.00 0.00 3.09
493 540 2.884012 TGTGTAGCATCACAAAGGTTGG 59.116 45.455 10.70 0.00 43.92 3.77
494 541 1.885887 TGTAGCATCACAAAGGTTGGC 59.114 47.619 0.00 0.00 34.12 4.52
495 542 2.162681 GTAGCATCACAAAGGTTGGCT 58.837 47.619 0.00 0.00 34.12 4.75
519 572 3.079960 CATGGATGAACATGCAAGAGC 57.920 47.619 12.40 0.00 42.36 4.09
574 631 5.835113 AATATTCCAAAACCATCAGTCCG 57.165 39.130 0.00 0.00 0.00 4.79
665 722 0.535780 ATCGAATCGCACATGGCCAT 60.536 50.000 14.09 14.09 40.31 4.40
677 738 1.728425 CATGGCCATGTATGACGATCG 59.272 52.381 33.68 14.88 34.23 3.69
679 740 1.618343 TGGCCATGTATGACGATCGAT 59.382 47.619 24.34 8.43 0.00 3.59
680 741 2.263077 GGCCATGTATGACGATCGATC 58.737 52.381 24.34 15.68 0.00 3.69
681 742 2.352715 GGCCATGTATGACGATCGATCA 60.353 50.000 24.34 20.58 0.00 2.92
682 743 3.515630 GCCATGTATGACGATCGATCAT 58.484 45.455 24.34 25.12 40.02 2.45
683 744 3.305361 GCCATGTATGACGATCGATCATG 59.695 47.826 28.11 24.86 37.38 3.07
684 745 3.305361 CCATGTATGACGATCGATCATGC 59.695 47.826 28.11 27.05 39.02 4.06
685 746 3.641437 TGTATGACGATCGATCATGCA 57.359 42.857 28.82 28.82 43.96 3.96
686 747 4.178545 TGTATGACGATCGATCATGCAT 57.821 40.909 28.82 22.38 42.13 3.96
687 748 5.309323 TGTATGACGATCGATCATGCATA 57.691 39.130 28.82 21.51 42.13 3.14
688 749 5.095490 TGTATGACGATCGATCATGCATAC 58.905 41.667 30.94 30.94 42.13 2.39
689 750 3.641437 TGACGATCGATCATGCATACA 57.359 42.857 24.34 10.19 0.00 2.29
690 751 4.178545 TGACGATCGATCATGCATACAT 57.821 40.909 24.34 0.00 36.79 2.29
691 752 5.309323 TGACGATCGATCATGCATACATA 57.691 39.130 24.34 0.00 33.67 2.29
692 753 5.095490 TGACGATCGATCATGCATACATAC 58.905 41.667 24.34 0.00 33.67 2.39
693 754 4.424626 ACGATCGATCATGCATACATACC 58.575 43.478 24.34 0.00 33.67 2.73
694 755 4.158579 ACGATCGATCATGCATACATACCT 59.841 41.667 24.34 0.00 33.67 3.08
695 756 4.501921 CGATCGATCATGCATACATACCTG 59.498 45.833 24.40 0.00 33.67 4.00
696 757 4.192429 TCGATCATGCATACATACCTGG 57.808 45.455 0.00 0.00 33.67 4.45
697 758 3.831911 TCGATCATGCATACATACCTGGA 59.168 43.478 0.00 0.00 33.67 3.86
698 759 4.467438 TCGATCATGCATACATACCTGGAT 59.533 41.667 0.00 0.00 33.67 3.41
699 760 5.046376 TCGATCATGCATACATACCTGGATT 60.046 40.000 0.00 0.00 33.67 3.01
700 761 5.292834 CGATCATGCATACATACCTGGATTC 59.707 44.000 0.00 0.00 33.67 2.52
701 762 4.568956 TCATGCATACATACCTGGATTCG 58.431 43.478 0.00 0.00 33.67 3.34
702 763 3.401033 TGCATACATACCTGGATTCGG 57.599 47.619 0.00 0.00 0.00 4.30
703 764 2.076863 GCATACATACCTGGATTCGGC 58.923 52.381 0.00 0.00 0.00 5.54
704 765 2.289694 GCATACATACCTGGATTCGGCT 60.290 50.000 0.00 0.00 0.00 5.52
705 766 3.807209 GCATACATACCTGGATTCGGCTT 60.807 47.826 0.00 0.00 0.00 4.35
706 767 2.332063 ACATACCTGGATTCGGCTTG 57.668 50.000 0.00 0.00 0.00 4.01
707 768 0.947244 CATACCTGGATTCGGCTTGC 59.053 55.000 0.00 0.00 0.00 4.01
708 769 0.179018 ATACCTGGATTCGGCTTGCC 60.179 55.000 0.00 0.75 0.00 4.52
709 770 1.271840 TACCTGGATTCGGCTTGCCT 61.272 55.000 10.12 0.00 0.00 4.75
710 771 2.117156 CCTGGATTCGGCTTGCCTG 61.117 63.158 10.12 3.87 0.00 4.85
711 772 2.751436 TGGATTCGGCTTGCCTGC 60.751 61.111 10.12 0.00 0.00 4.85
712 773 2.439156 GGATTCGGCTTGCCTGCT 60.439 61.111 10.12 0.00 0.00 4.24
713 774 2.476320 GGATTCGGCTTGCCTGCTC 61.476 63.158 10.12 3.36 0.00 4.26
714 775 2.439156 ATTCGGCTTGCCTGCTCC 60.439 61.111 10.12 0.00 0.00 4.70
715 776 4.722700 TTCGGCTTGCCTGCTCCC 62.723 66.667 10.12 0.00 0.00 4.30
718 779 4.811364 GGCTTGCCTGCTCCCTCC 62.811 72.222 4.11 0.00 0.00 4.30
719 780 4.811364 GCTTGCCTGCTCCCTCCC 62.811 72.222 0.00 0.00 0.00 4.30
720 781 3.333219 CTTGCCTGCTCCCTCCCA 61.333 66.667 0.00 0.00 0.00 4.37
721 782 2.614969 TTGCCTGCTCCCTCCCAT 60.615 61.111 0.00 0.00 0.00 4.00
722 783 2.905935 CTTGCCTGCTCCCTCCCATG 62.906 65.000 0.00 0.00 0.00 3.66
723 784 4.891037 GCCTGCTCCCTCCCATGC 62.891 72.222 0.00 0.00 0.00 4.06
724 785 3.095163 CCTGCTCCCTCCCATGCT 61.095 66.667 0.00 0.00 0.00 3.79
725 786 2.509916 CTGCTCCCTCCCATGCTC 59.490 66.667 0.00 0.00 0.00 4.26
726 787 3.092511 TGCTCCCTCCCATGCTCC 61.093 66.667 0.00 0.00 0.00 4.70
727 788 3.883549 GCTCCCTCCCATGCTCCC 61.884 72.222 0.00 0.00 0.00 4.30
728 789 2.367377 CTCCCTCCCATGCTCCCA 60.367 66.667 0.00 0.00 0.00 4.37
729 790 1.773391 CTCCCTCCCATGCTCCCAT 60.773 63.158 0.00 0.00 0.00 4.00
730 791 1.771746 TCCCTCCCATGCTCCCATC 60.772 63.158 0.00 0.00 0.00 3.51
731 792 2.838467 CCCTCCCATGCTCCCATCC 61.838 68.421 0.00 0.00 0.00 3.51
732 793 2.429058 CTCCCATGCTCCCATCCG 59.571 66.667 0.00 0.00 0.00 4.18
733 794 2.366837 TCCCATGCTCCCATCCGT 60.367 61.111 0.00 0.00 0.00 4.69
734 795 2.203252 CCCATGCTCCCATCCGTG 60.203 66.667 0.00 0.00 0.00 4.94
735 796 2.903855 CCATGCTCCCATCCGTGC 60.904 66.667 0.00 0.00 0.00 5.34
736 797 2.124612 CATGCTCCCATCCGTGCA 60.125 61.111 0.00 0.00 39.83 4.57
737 798 1.527611 CATGCTCCCATCCGTGCAT 60.528 57.895 0.00 0.00 45.57 3.96
738 799 1.228063 ATGCTCCCATCCGTGCATC 60.228 57.895 0.00 0.00 41.60 3.91
739 800 2.592861 GCTCCCATCCGTGCATCC 60.593 66.667 0.00 0.00 0.00 3.51
740 801 2.910360 CTCCCATCCGTGCATCCA 59.090 61.111 0.00 0.00 0.00 3.41
741 802 1.524621 CTCCCATCCGTGCATCCAC 60.525 63.158 0.00 0.00 38.62 4.02
742 803 1.976132 CTCCCATCCGTGCATCCACT 61.976 60.000 0.00 0.00 39.86 4.00
743 804 1.524621 CCCATCCGTGCATCCACTC 60.525 63.158 0.00 0.00 39.86 3.51
744 805 1.524621 CCATCCGTGCATCCACTCC 60.525 63.158 0.00 0.00 39.86 3.85
745 806 1.221566 CATCCGTGCATCCACTCCA 59.778 57.895 0.00 0.00 39.86 3.86
746 807 0.179037 CATCCGTGCATCCACTCCAT 60.179 55.000 0.00 0.00 39.86 3.41
747 808 0.107456 ATCCGTGCATCCACTCCATC 59.893 55.000 0.00 0.00 39.86 3.51
748 809 0.977627 TCCGTGCATCCACTCCATCT 60.978 55.000 0.00 0.00 39.86 2.90
749 810 0.107508 CCGTGCATCCACTCCATCTT 60.108 55.000 0.00 0.00 39.86 2.40
750 811 1.138859 CCGTGCATCCACTCCATCTTA 59.861 52.381 0.00 0.00 39.86 2.10
751 812 2.205074 CGTGCATCCACTCCATCTTAC 58.795 52.381 0.00 0.00 39.86 2.34
752 813 2.205074 GTGCATCCACTCCATCTTACG 58.795 52.381 0.00 0.00 38.93 3.18
753 814 1.138859 TGCATCCACTCCATCTTACGG 59.861 52.381 0.00 0.00 0.00 4.02
754 815 1.871080 CATCCACTCCATCTTACGGC 58.129 55.000 0.00 0.00 0.00 5.68
755 816 1.414181 CATCCACTCCATCTTACGGCT 59.586 52.381 0.00 0.00 0.00 5.52
756 817 0.824109 TCCACTCCATCTTACGGCTG 59.176 55.000 0.00 0.00 0.00 4.85
757 818 0.537188 CCACTCCATCTTACGGCTGT 59.463 55.000 2.42 2.42 0.00 4.40
758 819 1.471676 CCACTCCATCTTACGGCTGTC 60.472 57.143 0.00 0.00 0.00 3.51
759 820 1.478510 CACTCCATCTTACGGCTGTCT 59.521 52.381 0.00 0.00 0.00 3.41
760 821 2.093973 CACTCCATCTTACGGCTGTCTT 60.094 50.000 0.00 0.00 0.00 3.01
761 822 2.567615 ACTCCATCTTACGGCTGTCTTT 59.432 45.455 0.00 0.00 0.00 2.52
762 823 3.008049 ACTCCATCTTACGGCTGTCTTTT 59.992 43.478 0.00 0.00 0.00 2.27
763 824 4.003648 CTCCATCTTACGGCTGTCTTTTT 58.996 43.478 0.00 0.00 0.00 1.94
764 825 4.000988 TCCATCTTACGGCTGTCTTTTTC 58.999 43.478 0.00 0.00 0.00 2.29
765 826 4.003648 CCATCTTACGGCTGTCTTTTTCT 58.996 43.478 0.00 0.00 0.00 2.52
766 827 4.455877 CCATCTTACGGCTGTCTTTTTCTT 59.544 41.667 0.00 0.00 0.00 2.52
767 828 5.048713 CCATCTTACGGCTGTCTTTTTCTTT 60.049 40.000 0.00 0.00 0.00 2.52
768 829 6.438763 CATCTTACGGCTGTCTTTTTCTTTT 58.561 36.000 0.00 0.00 0.00 2.27
769 830 6.445357 TCTTACGGCTGTCTTTTTCTTTTT 57.555 33.333 0.00 0.00 0.00 1.94
770 831 6.492254 TCTTACGGCTGTCTTTTTCTTTTTC 58.508 36.000 0.00 0.00 0.00 2.29
771 832 4.983671 ACGGCTGTCTTTTTCTTTTTCT 57.016 36.364 0.00 0.00 0.00 2.52
772 833 4.921547 ACGGCTGTCTTTTTCTTTTTCTC 58.078 39.130 0.00 0.00 0.00 2.87
773 834 4.640647 ACGGCTGTCTTTTTCTTTTTCTCT 59.359 37.500 0.00 0.00 0.00 3.10
774 835 5.125578 ACGGCTGTCTTTTTCTTTTTCTCTT 59.874 36.000 0.00 0.00 0.00 2.85
775 836 6.036470 CGGCTGTCTTTTTCTTTTTCTCTTT 58.964 36.000 0.00 0.00 0.00 2.52
776 837 6.197282 CGGCTGTCTTTTTCTTTTTCTCTTTC 59.803 38.462 0.00 0.00 0.00 2.62
777 838 7.261325 GGCTGTCTTTTTCTTTTTCTCTTTCT 58.739 34.615 0.00 0.00 0.00 2.52
778 839 8.406297 GGCTGTCTTTTTCTTTTTCTCTTTCTA 58.594 33.333 0.00 0.00 0.00 2.10
779 840 9.788960 GCTGTCTTTTTCTTTTTCTCTTTCTAA 57.211 29.630 0.00 0.00 0.00 2.10
794 855 9.853177 TTCTCTTTCTAATCTAATCATTTCCCC 57.147 33.333 0.00 0.00 0.00 4.81
795 856 9.230477 TCTCTTTCTAATCTAATCATTTCCCCT 57.770 33.333 0.00 0.00 0.00 4.79
796 857 9.500785 CTCTTTCTAATCTAATCATTTCCCCTC 57.499 37.037 0.00 0.00 0.00 4.30
797 858 8.440771 TCTTTCTAATCTAATCATTTCCCCTCC 58.559 37.037 0.00 0.00 0.00 4.30
798 859 7.954539 TTCTAATCTAATCATTTCCCCTCCT 57.045 36.000 0.00 0.00 0.00 3.69
799 860 7.321717 TCTAATCTAATCATTTCCCCTCCTG 57.678 40.000 0.00 0.00 0.00 3.86
800 861 7.082316 TCTAATCTAATCATTTCCCCTCCTGA 58.918 38.462 0.00 0.00 0.00 3.86
801 862 6.793518 AATCTAATCATTTCCCCTCCTGAT 57.206 37.500 0.00 0.00 0.00 2.90
802 863 6.793518 ATCTAATCATTTCCCCTCCTGATT 57.206 37.500 0.00 0.00 40.44 2.57
803 864 6.596869 TCTAATCATTTCCCCTCCTGATTT 57.403 37.500 2.37 0.00 38.77 2.17
804 865 6.985225 TCTAATCATTTCCCCTCCTGATTTT 58.015 36.000 2.37 0.00 38.77 1.82
805 866 8.113114 TCTAATCATTTCCCCTCCTGATTTTA 57.887 34.615 2.37 0.00 38.77 1.52
806 867 8.565239 TCTAATCATTTCCCCTCCTGATTTTAA 58.435 33.333 2.37 0.00 38.77 1.52
807 868 7.666063 AATCATTTCCCCTCCTGATTTTAAG 57.334 36.000 0.00 0.00 35.38 1.85
808 869 5.518865 TCATTTCCCCTCCTGATTTTAAGG 58.481 41.667 0.00 0.00 36.02 2.69
809 870 4.331159 TTTCCCCTCCTGATTTTAAGGG 57.669 45.455 0.00 0.00 46.85 3.95
814 875 3.891049 CCTCCTGATTTTAAGGGAGTGG 58.109 50.000 0.00 0.00 42.56 4.00
815 876 3.372025 CCTCCTGATTTTAAGGGAGTGGG 60.372 52.174 0.00 0.00 42.56 4.61
816 877 3.523564 CTCCTGATTTTAAGGGAGTGGGA 59.476 47.826 0.00 0.00 40.11 4.37
817 878 3.920197 TCCTGATTTTAAGGGAGTGGGAA 59.080 43.478 0.00 0.00 35.35 3.97
818 879 4.017126 CCTGATTTTAAGGGAGTGGGAAC 58.983 47.826 0.00 0.00 0.00 3.62
819 880 3.681593 TGATTTTAAGGGAGTGGGAACG 58.318 45.455 0.00 0.00 0.00 3.95
820 881 2.572209 TTTTAAGGGAGTGGGAACGG 57.428 50.000 0.00 0.00 0.00 4.44
821 882 0.694196 TTTAAGGGAGTGGGAACGGG 59.306 55.000 0.00 0.00 0.00 5.28
822 883 1.844544 TTAAGGGAGTGGGAACGGGC 61.845 60.000 0.00 0.00 0.00 6.13
825 886 3.647771 GGAGTGGGAACGGGCCTT 61.648 66.667 0.84 0.00 0.00 4.35
826 887 2.295602 GGAGTGGGAACGGGCCTTA 61.296 63.158 0.84 0.00 0.00 2.69
827 888 1.632965 GGAGTGGGAACGGGCCTTAT 61.633 60.000 0.84 0.00 0.00 1.73
828 889 0.255033 GAGTGGGAACGGGCCTTATT 59.745 55.000 0.84 0.00 0.00 1.40
829 890 0.702316 AGTGGGAACGGGCCTTATTT 59.298 50.000 0.84 0.00 0.00 1.40
830 891 1.076513 AGTGGGAACGGGCCTTATTTT 59.923 47.619 0.84 0.00 0.00 1.82
831 892 1.203758 GTGGGAACGGGCCTTATTTTG 59.796 52.381 0.84 0.00 0.00 2.44
832 893 1.203075 TGGGAACGGGCCTTATTTTGT 60.203 47.619 0.84 0.00 0.00 2.83
833 894 1.897133 GGGAACGGGCCTTATTTTGTT 59.103 47.619 0.84 0.00 0.00 2.83
834 895 2.094390 GGGAACGGGCCTTATTTTGTTC 60.094 50.000 0.84 5.81 36.02 3.18
835 896 2.094390 GGAACGGGCCTTATTTTGTTCC 60.094 50.000 17.62 17.62 45.78 3.62
836 897 2.296073 ACGGGCCTTATTTTGTTCCA 57.704 45.000 0.84 0.00 0.00 3.53
837 898 2.599677 ACGGGCCTTATTTTGTTCCAA 58.400 42.857 0.84 0.00 0.00 3.53
838 899 3.169908 ACGGGCCTTATTTTGTTCCAAT 58.830 40.909 0.84 0.00 0.00 3.16
839 900 3.194755 ACGGGCCTTATTTTGTTCCAATC 59.805 43.478 0.84 0.00 0.00 2.67
840 901 3.194542 CGGGCCTTATTTTGTTCCAATCA 59.805 43.478 0.84 0.00 0.00 2.57
841 902 4.322349 CGGGCCTTATTTTGTTCCAATCAA 60.322 41.667 0.84 0.00 0.00 2.57
842 903 5.555966 GGGCCTTATTTTGTTCCAATCAAA 58.444 37.500 0.84 0.00 33.76 2.69
843 904 6.179756 GGGCCTTATTTTGTTCCAATCAAAT 58.820 36.000 0.84 0.00 35.25 2.32
844 905 6.316140 GGGCCTTATTTTGTTCCAATCAAATC 59.684 38.462 0.84 0.00 35.25 2.17
845 906 6.878389 GGCCTTATTTTGTTCCAATCAAATCA 59.122 34.615 0.00 0.00 35.25 2.57
846 907 7.553760 GGCCTTATTTTGTTCCAATCAAATCAT 59.446 33.333 0.00 0.00 35.25 2.45
847 908 8.392612 GCCTTATTTTGTTCCAATCAAATCATG 58.607 33.333 0.00 0.00 35.25 3.07
848 909 8.392612 CCTTATTTTGTTCCAATCAAATCATGC 58.607 33.333 0.00 0.00 35.25 4.06
849 910 6.746745 ATTTTGTTCCAATCAAATCATGCC 57.253 33.333 0.00 0.00 35.25 4.40
850 911 4.886496 TTGTTCCAATCAAATCATGCCA 57.114 36.364 0.00 0.00 0.00 4.92
851 912 4.191033 TGTTCCAATCAAATCATGCCAC 57.809 40.909 0.00 0.00 0.00 5.01
852 913 3.181397 GTTCCAATCAAATCATGCCACG 58.819 45.455 0.00 0.00 0.00 4.94
853 914 2.445427 TCCAATCAAATCATGCCACGT 58.555 42.857 0.00 0.00 0.00 4.49
854 915 3.615155 TCCAATCAAATCATGCCACGTA 58.385 40.909 0.00 0.00 0.00 3.57
855 916 4.206375 TCCAATCAAATCATGCCACGTAT 58.794 39.130 0.00 0.00 0.00 3.06
856 917 4.036616 TCCAATCAAATCATGCCACGTATG 59.963 41.667 0.00 0.00 0.00 2.39
857 918 3.631145 ATCAAATCATGCCACGTATGC 57.369 42.857 2.46 2.46 0.00 3.14
858 919 1.330213 TCAAATCATGCCACGTATGCG 59.670 47.619 0.19 0.19 44.93 4.73
859 920 0.662619 AAATCATGCCACGTATGCGG 59.337 50.000 8.39 0.00 43.45 5.69
860 921 1.165907 AATCATGCCACGTATGCGGG 61.166 55.000 8.39 2.48 43.45 6.13
861 922 2.038814 ATCATGCCACGTATGCGGGA 62.039 55.000 7.15 5.28 45.97 5.14
862 923 2.108976 ATGCCACGTATGCGGGAG 59.891 61.111 7.15 0.00 45.97 4.30
896 957 3.882025 CCGAGAAGCAGGCAAGTC 58.118 61.111 0.00 0.00 0.00 3.01
897 958 1.294780 CCGAGAAGCAGGCAAGTCT 59.705 57.895 0.00 0.00 0.00 3.24
898 959 0.739112 CCGAGAAGCAGGCAAGTCTC 60.739 60.000 8.66 8.66 34.43 3.36
899 960 2.748268 GAGAAGCAGGCAAGTCTCG 58.252 57.895 0.00 0.00 0.00 4.04
900 961 0.037790 GAGAAGCAGGCAAGTCTCGT 60.038 55.000 0.00 0.00 0.00 4.18
901 962 0.037790 AGAAGCAGGCAAGTCTCGTC 60.038 55.000 0.00 0.00 0.00 4.20
918 979 5.939296 GTCTCGTCCTACATACCTAAGCTAT 59.061 44.000 0.00 0.00 0.00 2.97
925 986 4.170292 ACATACCTAAGCTATTACGCCG 57.830 45.455 0.00 0.00 0.00 6.46
981 1046 5.293569 GCATATCACCCGGCTATAAATACAC 59.706 44.000 0.00 0.00 0.00 2.90
1244 1336 3.567797 CGCGCTAAAGCTGAGGGC 61.568 66.667 21.55 21.55 46.38 5.19
1404 1496 3.771160 ATCCACCTCGACGTGCCC 61.771 66.667 8.82 0.00 32.10 5.36
1479 1571 0.679640 CTTGCCCAGCCCATTAACGA 60.680 55.000 0.00 0.00 0.00 3.85
1495 1591 1.560770 CGAACGCGTACTGTTGCAA 59.439 52.632 14.46 0.00 0.00 4.08
1498 1594 0.303493 AACGCGTACTGTTGCAACTG 59.697 50.000 28.57 28.57 0.00 3.16
1528 1624 3.860641 CCGCCCAATAAGATTTGCTTTT 58.139 40.909 0.00 0.00 38.05 2.27
1559 2914 3.463127 GTCGTTGTTATTTTCGTGTCCG 58.537 45.455 0.00 0.00 0.00 4.79
1581 2936 3.608073 GCATTTGAATCGTTGTAACCAGC 59.392 43.478 0.00 0.00 0.00 4.85
1718 3741 0.992757 GTACTGATCTAGACGCGCGC 60.993 60.000 32.58 23.91 0.00 6.86
1759 3787 9.950680 TGTAGCTTCTTCATTTTTGAAAACTAG 57.049 29.630 0.00 0.00 0.00 2.57
1762 3790 9.688592 AGCTTCTTCATTTTTGAAAACTAGATG 57.311 29.630 0.00 0.00 0.00 2.90
1763 3791 9.683069 GCTTCTTCATTTTTGAAAACTAGATGA 57.317 29.630 0.00 0.00 0.00 2.92
1765 3793 9.663904 TTCTTCATTTTTGAAAACTAGATGACG 57.336 29.630 0.00 2.56 0.00 4.35
1766 3794 7.803189 TCTTCATTTTTGAAAACTAGATGACGC 59.197 33.333 0.00 0.00 0.00 5.19
1768 3796 6.206634 TCATTTTTGAAAACTAGATGACGCCT 59.793 34.615 0.00 0.00 0.00 5.52
1769 3797 6.385649 TTTTTGAAAACTAGATGACGCCTT 57.614 33.333 0.00 0.00 0.00 4.35
1770 3798 7.499321 TTTTTGAAAACTAGATGACGCCTTA 57.501 32.000 0.00 0.00 0.00 2.69
1771 3799 6.476243 TTTGAAAACTAGATGACGCCTTAC 57.524 37.500 0.00 0.00 0.00 2.34
1772 3800 4.501071 TGAAAACTAGATGACGCCTTACC 58.499 43.478 0.00 0.00 0.00 2.85
1773 3801 3.538634 AAACTAGATGACGCCTTACCC 57.461 47.619 0.00 0.00 0.00 3.69
1774 3802 1.411041 ACTAGATGACGCCTTACCCC 58.589 55.000 0.00 0.00 0.00 4.95
1775 3803 0.314302 CTAGATGACGCCTTACCCCG 59.686 60.000 0.00 0.00 0.00 5.73
1776 3804 1.741327 TAGATGACGCCTTACCCCGC 61.741 60.000 0.00 0.00 0.00 6.13
1777 3805 3.379865 GATGACGCCTTACCCCGCA 62.380 63.158 0.00 0.00 0.00 5.69
1779 3807 2.358984 GACGCCTTACCCCGCAAA 60.359 61.111 0.00 0.00 0.00 3.68
1780 3808 1.967494 GACGCCTTACCCCGCAAAA 60.967 57.895 0.00 0.00 0.00 2.44
1781 3809 1.517210 GACGCCTTACCCCGCAAAAA 61.517 55.000 0.00 0.00 0.00 1.94
1804 3832 2.447443 AGAACTAGATGACGCCTCACA 58.553 47.619 0.00 0.00 0.00 3.58
1805 3833 2.164624 AGAACTAGATGACGCCTCACAC 59.835 50.000 0.00 0.00 0.00 3.82
1806 3834 0.452184 ACTAGATGACGCCTCACACG 59.548 55.000 0.00 0.00 0.00 4.49
1808 3836 0.885879 TAGATGACGCCTCACACGTT 59.114 50.000 0.00 0.00 45.24 3.99
1809 3837 0.885879 AGATGACGCCTCACACGTTA 59.114 50.000 0.00 0.00 45.24 3.18
1810 3838 0.989890 GATGACGCCTCACACGTTAC 59.010 55.000 0.00 0.00 45.24 2.50
1811 3839 0.601558 ATGACGCCTCACACGTTACT 59.398 50.000 0.00 0.00 45.24 2.24
1812 3840 0.318360 TGACGCCTCACACGTTACTG 60.318 55.000 0.00 0.00 45.24 2.74
1813 3841 1.615107 GACGCCTCACACGTTACTGC 61.615 60.000 0.00 0.00 45.24 4.40
1814 3842 2.716828 CGCCTCACACGTTACTGCG 61.717 63.158 0.00 0.00 37.94 5.18
1913 3941 7.250569 AGTTATCTGTTTACATCAATTTGCCG 58.749 34.615 0.00 0.00 0.00 5.69
1914 3942 3.832276 TCTGTTTACATCAATTTGCCGC 58.168 40.909 0.00 0.00 0.00 6.53
1915 3943 3.254411 TCTGTTTACATCAATTTGCCGCA 59.746 39.130 0.00 0.00 0.00 5.69
1916 3944 3.982475 TGTTTACATCAATTTGCCGCAA 58.018 36.364 0.38 0.38 0.00 4.85
1917 3945 4.371786 TGTTTACATCAATTTGCCGCAAA 58.628 34.783 20.38 20.38 37.75 3.68
1918 3946 4.210120 TGTTTACATCAATTTGCCGCAAAC 59.790 37.500 20.51 5.58 36.13 2.93
1919 3947 2.522836 ACATCAATTTGCCGCAAACA 57.477 40.000 20.51 8.36 36.13 2.83
1920 3948 2.134346 ACATCAATTTGCCGCAAACAC 58.866 42.857 20.51 0.00 36.13 3.32
1921 3949 2.133553 CATCAATTTGCCGCAAACACA 58.866 42.857 20.51 7.67 36.13 3.72
1922 3950 1.850377 TCAATTTGCCGCAAACACAG 58.150 45.000 20.51 10.67 36.13 3.66
1923 3951 1.135915 TCAATTTGCCGCAAACACAGT 59.864 42.857 20.51 1.81 36.13 3.55
1924 3952 1.258458 CAATTTGCCGCAAACACAGTG 59.742 47.619 20.51 9.99 36.13 3.66
1925 3953 0.743688 ATTTGCCGCAAACACAGTGA 59.256 45.000 20.51 0.00 36.13 3.41
1926 3954 0.100325 TTTGCCGCAAACACAGTGAG 59.900 50.000 14.60 0.00 0.00 3.51
1927 3955 1.723608 TTGCCGCAAACACAGTGAGG 61.724 55.000 7.81 3.73 38.83 3.86
1928 3956 2.639286 CCGCAAACACAGTGAGGC 59.361 61.111 7.81 6.66 0.00 4.70
1929 3957 2.639286 CGCAAACACAGTGAGGCC 59.361 61.111 7.81 0.00 0.00 5.19
1930 3958 2.186160 CGCAAACACAGTGAGGCCA 61.186 57.895 7.81 0.00 0.00 5.36
1931 3959 1.360192 GCAAACACAGTGAGGCCAC 59.640 57.895 7.81 0.00 43.50 5.01
1955 3983 4.704833 GCGTGGCTGGCTGAGGAA 62.705 66.667 2.00 0.00 0.00 3.36
1956 3984 2.032528 CGTGGCTGGCTGAGGAAA 59.967 61.111 2.00 0.00 0.00 3.13
1957 3985 1.377725 CGTGGCTGGCTGAGGAAAT 60.378 57.895 2.00 0.00 0.00 2.17
1958 3986 1.372087 CGTGGCTGGCTGAGGAAATC 61.372 60.000 2.00 0.00 0.00 2.17
1959 3987 0.034670 GTGGCTGGCTGAGGAAATCT 60.035 55.000 2.00 0.00 0.00 2.40
1960 3988 0.254178 TGGCTGGCTGAGGAAATCTC 59.746 55.000 2.00 0.00 42.74 2.75
1961 3989 0.465278 GGCTGGCTGAGGAAATCTCC 60.465 60.000 0.00 0.00 41.76 3.71
1977 4005 7.842982 GGAAATCTCCTATACCACTAATCTCC 58.157 42.308 0.00 0.00 38.88 3.71
1978 4006 7.455008 GGAAATCTCCTATACCACTAATCTCCA 59.545 40.741 0.00 0.00 38.88 3.86
1979 4007 8.429237 AAATCTCCTATACCACTAATCTCCAG 57.571 38.462 0.00 0.00 0.00 3.86
1980 4008 6.532119 TCTCCTATACCACTAATCTCCAGT 57.468 41.667 0.00 0.00 0.00 4.00
1981 4009 6.923670 TCTCCTATACCACTAATCTCCAGTT 58.076 40.000 0.00 0.00 0.00 3.16
1982 4010 8.053776 TCTCCTATACCACTAATCTCCAGTTA 57.946 38.462 0.00 0.00 0.00 2.24
1983 4011 8.679725 TCTCCTATACCACTAATCTCCAGTTAT 58.320 37.037 0.00 0.00 0.00 1.89
1984 4012 8.880991 TCCTATACCACTAATCTCCAGTTATC 57.119 38.462 0.00 0.00 0.00 1.75
1985 4013 7.894364 TCCTATACCACTAATCTCCAGTTATCC 59.106 40.741 0.00 0.00 0.00 2.59
1986 4014 6.936968 ATACCACTAATCTCCAGTTATCCC 57.063 41.667 0.00 0.00 0.00 3.85
1987 4015 4.897051 ACCACTAATCTCCAGTTATCCCT 58.103 43.478 0.00 0.00 0.00 4.20
1988 4016 5.289510 ACCACTAATCTCCAGTTATCCCTT 58.710 41.667 0.00 0.00 0.00 3.95
1989 4017 5.731678 ACCACTAATCTCCAGTTATCCCTTT 59.268 40.000 0.00 0.00 0.00 3.11
1990 4018 6.058183 CCACTAATCTCCAGTTATCCCTTTG 58.942 44.000 0.00 0.00 0.00 2.77
1991 4019 6.058183 CACTAATCTCCAGTTATCCCTTTGG 58.942 44.000 0.00 0.00 0.00 3.28
1993 4021 5.796502 AATCTCCAGTTATCCCTTTGGAA 57.203 39.130 0.00 0.00 45.98 3.53
1994 4022 4.844349 TCTCCAGTTATCCCTTTGGAAG 57.156 45.455 0.00 0.00 45.98 3.46
1995 4023 4.175962 TCTCCAGTTATCCCTTTGGAAGT 58.824 43.478 0.00 0.00 45.98 3.01
1996 4024 4.601857 TCTCCAGTTATCCCTTTGGAAGTT 59.398 41.667 0.00 0.00 45.98 2.66
1997 4025 4.662278 TCCAGTTATCCCTTTGGAAGTTG 58.338 43.478 0.00 0.00 45.98 3.16
1998 4026 3.763897 CCAGTTATCCCTTTGGAAGTTGG 59.236 47.826 0.00 0.00 45.98 3.77
1999 4027 4.508405 CCAGTTATCCCTTTGGAAGTTGGA 60.508 45.833 0.00 0.00 45.98 3.53
2000 4028 5.076873 CAGTTATCCCTTTGGAAGTTGGAA 58.923 41.667 0.00 0.00 45.98 3.53
2001 4029 5.716703 CAGTTATCCCTTTGGAAGTTGGAAT 59.283 40.000 0.00 0.00 45.98 3.01
2002 4030 6.211384 CAGTTATCCCTTTGGAAGTTGGAATT 59.789 38.462 0.00 0.00 45.98 2.17
2003 4031 6.787458 AGTTATCCCTTTGGAAGTTGGAATTT 59.213 34.615 0.00 0.00 45.98 1.82
2004 4032 4.953940 TCCCTTTGGAAGTTGGAATTTG 57.046 40.909 0.00 0.00 37.86 2.32
2005 4033 3.645687 TCCCTTTGGAAGTTGGAATTTGG 59.354 43.478 0.00 0.00 37.86 3.28
2006 4034 3.244526 CCCTTTGGAAGTTGGAATTTGGG 60.245 47.826 0.00 0.00 0.00 4.12
2345 4373 3.228499 CATGAGATCGGGCCTGATG 57.772 57.895 32.10 14.81 0.00 3.07
2346 4374 0.395686 CATGAGATCGGGCCTGATGT 59.604 55.000 32.10 27.84 0.00 3.06
2347 4375 1.135094 ATGAGATCGGGCCTGATGTT 58.865 50.000 32.10 18.95 0.00 2.71
2348 4376 0.465705 TGAGATCGGGCCTGATGTTC 59.534 55.000 32.10 25.53 0.00 3.18
2349 4377 0.755686 GAGATCGGGCCTGATGTTCT 59.244 55.000 32.10 22.88 0.00 3.01
2350 4378 1.139853 GAGATCGGGCCTGATGTTCTT 59.860 52.381 32.10 7.41 0.00 2.52
2351 4379 1.561542 AGATCGGGCCTGATGTTCTTT 59.438 47.619 32.10 6.54 0.00 2.52
2352 4380 2.025887 AGATCGGGCCTGATGTTCTTTT 60.026 45.455 32.10 5.67 0.00 2.27
2353 4381 2.286365 TCGGGCCTGATGTTCTTTTT 57.714 45.000 11.27 0.00 0.00 1.94
2371 4399 2.396590 TTTCTCCGAAATTCCTCCGG 57.603 50.000 0.00 0.00 44.22 5.14
2372 4400 0.107848 TTCTCCGAAATTCCTCCGGC 60.108 55.000 0.00 0.00 42.70 6.13
2373 4401 1.523938 CTCCGAAATTCCTCCGGCC 60.524 63.158 0.00 0.00 42.70 6.13
2374 4402 2.895372 CCGAAATTCCTCCGGCCG 60.895 66.667 21.04 21.04 36.62 6.13
2375 4403 2.185867 CGAAATTCCTCCGGCCGA 59.814 61.111 30.73 12.25 0.00 5.54
2376 4404 1.227556 CGAAATTCCTCCGGCCGAT 60.228 57.895 30.73 8.96 0.00 4.18
2377 4405 1.498865 CGAAATTCCTCCGGCCGATG 61.499 60.000 30.73 18.55 0.00 3.84
2378 4406 1.786049 GAAATTCCTCCGGCCGATGC 61.786 60.000 30.73 3.91 0.00 3.91
2379 4407 2.550699 AAATTCCTCCGGCCGATGCA 62.551 55.000 30.73 6.59 40.13 3.96
2380 4408 2.947938 AATTCCTCCGGCCGATGCAG 62.948 60.000 30.73 16.15 40.13 4.41
2389 4417 2.270205 CCGATGCAGGCCTTCTGT 59.730 61.111 0.00 0.00 45.08 3.41
2390 4418 1.817099 CCGATGCAGGCCTTCTGTC 60.817 63.158 0.00 0.00 45.08 3.51
2391 4419 1.220206 CGATGCAGGCCTTCTGTCT 59.780 57.895 0.00 0.00 45.08 3.41
2392 4420 0.809241 CGATGCAGGCCTTCTGTCTC 60.809 60.000 0.00 0.00 45.08 3.36
2393 4421 0.809241 GATGCAGGCCTTCTGTCTCG 60.809 60.000 0.00 0.00 45.08 4.04
2394 4422 2.817396 GCAGGCCTTCTGTCTCGC 60.817 66.667 0.00 0.00 45.08 5.03
2395 4423 2.125350 CAGGCCTTCTGTCTCGCC 60.125 66.667 0.00 0.00 41.96 5.54
2396 4424 3.394836 AGGCCTTCTGTCTCGCCC 61.395 66.667 0.00 0.00 42.66 6.13
2397 4425 3.706373 GGCCTTCTGTCTCGCCCA 61.706 66.667 0.00 0.00 35.23 5.36
2398 4426 2.586792 GCCTTCTGTCTCGCCCAT 59.413 61.111 0.00 0.00 0.00 4.00
2399 4427 1.522580 GCCTTCTGTCTCGCCCATC 60.523 63.158 0.00 0.00 0.00 3.51
2400 4428 1.965754 GCCTTCTGTCTCGCCCATCT 61.966 60.000 0.00 0.00 0.00 2.90
2401 4429 0.103937 CCTTCTGTCTCGCCCATCTC 59.896 60.000 0.00 0.00 0.00 2.75
2402 4430 1.110442 CTTCTGTCTCGCCCATCTCT 58.890 55.000 0.00 0.00 0.00 3.10
2403 4431 0.820226 TTCTGTCTCGCCCATCTCTG 59.180 55.000 0.00 0.00 0.00 3.35
2404 4432 1.039785 TCTGTCTCGCCCATCTCTGG 61.040 60.000 0.00 0.00 42.73 3.86
2405 4433 1.305297 TGTCTCGCCCATCTCTGGT 60.305 57.895 0.00 0.00 41.37 4.00
2406 4434 0.904865 TGTCTCGCCCATCTCTGGTT 60.905 55.000 0.00 0.00 41.37 3.67
2407 4435 0.460987 GTCTCGCCCATCTCTGGTTG 60.461 60.000 0.00 0.00 41.37 3.77
2408 4436 0.904865 TCTCGCCCATCTCTGGTTGT 60.905 55.000 0.00 0.00 41.37 3.32
2409 4437 0.742281 CTCGCCCATCTCTGGTTGTG 60.742 60.000 0.00 0.00 41.37 3.33
2410 4438 1.191489 TCGCCCATCTCTGGTTGTGA 61.191 55.000 0.00 0.00 41.37 3.58
2411 4439 1.021390 CGCCCATCTCTGGTTGTGAC 61.021 60.000 0.00 0.00 41.37 3.67
2412 4440 0.036732 GCCCATCTCTGGTTGTGACA 59.963 55.000 0.00 0.00 41.37 3.58
2413 4441 1.545428 GCCCATCTCTGGTTGTGACAA 60.545 52.381 0.00 0.00 41.37 3.18
2414 4442 2.154462 CCCATCTCTGGTTGTGACAAC 58.846 52.381 19.59 19.59 41.37 3.32
2415 4443 2.154462 CCATCTCTGGTTGTGACAACC 58.846 52.381 34.35 34.35 37.79 3.77
2416 4444 2.154462 CATCTCTGGTTGTGACAACCC 58.846 52.381 36.48 22.57 39.54 4.11
2417 4445 1.208706 TCTCTGGTTGTGACAACCCA 58.791 50.000 36.48 24.85 39.54 4.51
2418 4446 1.774254 TCTCTGGTTGTGACAACCCAT 59.226 47.619 36.48 0.00 39.54 4.00
2419 4447 2.154462 CTCTGGTTGTGACAACCCATC 58.846 52.381 36.48 17.85 39.54 3.51
2420 4448 1.774254 TCTGGTTGTGACAACCCATCT 59.226 47.619 36.48 0.00 39.54 2.90
2421 4449 2.154462 CTGGTTGTGACAACCCATCTC 58.846 52.381 36.48 16.87 39.54 2.75
2422 4450 1.202879 TGGTTGTGACAACCCATCTCC 60.203 52.381 36.48 16.66 39.54 3.71
2423 4451 1.073923 GGTTGTGACAACCCATCTCCT 59.926 52.381 31.94 0.00 34.26 3.69
2424 4452 2.427506 GTTGTGACAACCCATCTCCTC 58.572 52.381 17.24 0.00 0.00 3.71
2425 4453 0.984230 TGTGACAACCCATCTCCTCC 59.016 55.000 0.00 0.00 0.00 4.30
2426 4454 0.253327 GTGACAACCCATCTCCTCCC 59.747 60.000 0.00 0.00 0.00 4.30
2427 4455 0.178876 TGACAACCCATCTCCTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
2428 4456 1.216990 GACAACCCATCTCCTCCCAT 58.783 55.000 0.00 0.00 0.00 4.00
2429 4457 0.921896 ACAACCCATCTCCTCCCATG 59.078 55.000 0.00 0.00 0.00 3.66
2430 4458 0.466922 CAACCCATCTCCTCCCATGC 60.467 60.000 0.00 0.00 0.00 4.06
2431 4459 1.649271 AACCCATCTCCTCCCATGCC 61.649 60.000 0.00 0.00 0.00 4.40
2432 4460 2.838467 CCCATCTCCTCCCATGCCC 61.838 68.421 0.00 0.00 0.00 5.36
2433 4461 2.080536 CCATCTCCTCCCATGCCCA 61.081 63.158 0.00 0.00 0.00 5.36
2434 4462 1.432852 CCATCTCCTCCCATGCCCAT 61.433 60.000 0.00 0.00 0.00 4.00
2435 4463 1.365293 CATCTCCTCCCATGCCCATA 58.635 55.000 0.00 0.00 0.00 2.74
2436 4464 1.281287 CATCTCCTCCCATGCCCATAG 59.719 57.143 0.00 0.00 0.00 2.23
2437 4465 0.268869 TCTCCTCCCATGCCCATAGT 59.731 55.000 0.00 0.00 0.00 2.12
2438 4466 0.399454 CTCCTCCCATGCCCATAGTG 59.601 60.000 0.00 0.00 0.00 2.74
2439 4467 1.061905 TCCTCCCATGCCCATAGTGG 61.062 60.000 0.00 0.00 37.25 4.00
2440 4468 1.061905 CCTCCCATGCCCATAGTGGA 61.062 60.000 0.00 0.00 40.96 4.02
2441 4469 0.109342 CTCCCATGCCCATAGTGGAC 59.891 60.000 0.00 0.00 40.96 4.02
2442 4470 1.151450 CCCATGCCCATAGTGGACC 59.849 63.158 0.00 0.00 40.96 4.46
2443 4471 1.355718 CCCATGCCCATAGTGGACCT 61.356 60.000 0.00 0.00 40.96 3.85
2444 4472 0.109342 CCATGCCCATAGTGGACCTC 59.891 60.000 0.00 0.00 40.96 3.85
2445 4473 0.839277 CATGCCCATAGTGGACCTCA 59.161 55.000 0.00 0.00 40.96 3.86
2446 4474 1.422781 CATGCCCATAGTGGACCTCAT 59.577 52.381 0.00 0.00 40.96 2.90
2447 4475 0.839277 TGCCCATAGTGGACCTCATG 59.161 55.000 0.00 0.00 40.96 3.07
2448 4476 0.536006 GCCCATAGTGGACCTCATGC 60.536 60.000 0.00 0.00 40.96 4.06
2449 4477 0.109342 CCCATAGTGGACCTCATGCC 59.891 60.000 0.00 0.00 40.96 4.40
2450 4478 0.839277 CCATAGTGGACCTCATGCCA 59.161 55.000 0.00 0.00 40.96 4.92
2451 4479 1.422781 CCATAGTGGACCTCATGCCAT 59.577 52.381 0.00 0.00 40.96 4.40
2452 4480 2.639347 CCATAGTGGACCTCATGCCATA 59.361 50.000 0.00 0.00 40.96 2.74
2453 4481 3.265221 CCATAGTGGACCTCATGCCATAT 59.735 47.826 0.00 0.00 40.96 1.78
2454 4482 4.263639 CCATAGTGGACCTCATGCCATATT 60.264 45.833 0.00 0.00 40.96 1.28
2455 4483 3.498774 AGTGGACCTCATGCCATATTC 57.501 47.619 0.00 0.00 36.41 1.75
2456 4484 3.051581 AGTGGACCTCATGCCATATTCT 58.948 45.455 0.00 0.00 36.41 2.40
2457 4485 3.461085 AGTGGACCTCATGCCATATTCTT 59.539 43.478 0.00 0.00 36.41 2.52
2458 4486 3.817647 GTGGACCTCATGCCATATTCTTC 59.182 47.826 0.00 0.00 36.41 2.87
2459 4487 3.718434 TGGACCTCATGCCATATTCTTCT 59.282 43.478 0.00 0.00 0.00 2.85
2460 4488 4.202398 TGGACCTCATGCCATATTCTTCTC 60.202 45.833 0.00 0.00 0.00 2.87
2461 4489 4.322567 GACCTCATGCCATATTCTTCTCC 58.677 47.826 0.00 0.00 0.00 3.71
2462 4490 3.073650 ACCTCATGCCATATTCTTCTCCC 59.926 47.826 0.00 0.00 0.00 4.30
2463 4491 3.560882 CCTCATGCCATATTCTTCTCCCC 60.561 52.174 0.00 0.00 0.00 4.81
2464 4492 2.376518 TCATGCCATATTCTTCTCCCCC 59.623 50.000 0.00 0.00 0.00 5.40
2465 4493 2.212752 TGCCATATTCTTCTCCCCCT 57.787 50.000 0.00 0.00 0.00 4.79
2466 4494 2.502745 TGCCATATTCTTCTCCCCCTT 58.497 47.619 0.00 0.00 0.00 3.95
2467 4495 2.443255 TGCCATATTCTTCTCCCCCTTC 59.557 50.000 0.00 0.00 0.00 3.46
2468 4496 2.443255 GCCATATTCTTCTCCCCCTTCA 59.557 50.000 0.00 0.00 0.00 3.02
2469 4497 3.748989 GCCATATTCTTCTCCCCCTTCAC 60.749 52.174 0.00 0.00 0.00 3.18
2470 4498 3.718956 CCATATTCTTCTCCCCCTTCACT 59.281 47.826 0.00 0.00 0.00 3.41
2471 4499 4.445448 CCATATTCTTCTCCCCCTTCACTG 60.445 50.000 0.00 0.00 0.00 3.66
2472 4500 1.362224 TTCTTCTCCCCCTTCACTGG 58.638 55.000 0.00 0.00 0.00 4.00
2473 4501 0.491823 TCTTCTCCCCCTTCACTGGA 59.508 55.000 0.00 0.00 0.00 3.86
2474 4502 1.081174 TCTTCTCCCCCTTCACTGGAT 59.919 52.381 0.00 0.00 0.00 3.41
2475 4503 1.488393 CTTCTCCCCCTTCACTGGATC 59.512 57.143 0.00 0.00 0.00 3.36
2476 4504 0.326618 TCTCCCCCTTCACTGGATCC 60.327 60.000 4.20 4.20 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.476202 CGATGTTATCTTTGATAGTACCATCAA 57.524 33.333 12.00 12.00 41.90 2.57
16 17 2.957006 ACCGGCTAGAACGATGTTATCT 59.043 45.455 0.00 0.00 0.00 1.98
20 21 1.274167 TGAACCGGCTAGAACGATGTT 59.726 47.619 0.00 5.52 0.00 2.71
22 23 1.135083 ACTGAACCGGCTAGAACGATG 60.135 52.381 0.00 0.00 0.00 3.84
23 24 1.183549 ACTGAACCGGCTAGAACGAT 58.816 50.000 0.00 0.00 0.00 3.73
24 25 1.825090 TACTGAACCGGCTAGAACGA 58.175 50.000 0.00 0.00 0.00 3.85
37 41 4.080919 CCTCCATGTGAGACCAATACTGAA 60.081 45.833 11.48 0.00 44.42 3.02
41 45 3.914426 ACCTCCATGTGAGACCAATAC 57.086 47.619 11.48 0.00 44.42 1.89
69 88 2.961526 ATGTAAGCCGACATCGAAGT 57.038 45.000 2.09 0.00 43.02 3.01
71 90 2.546778 GGAATGTAAGCCGACATCGAA 58.453 47.619 2.09 0.00 39.16 3.71
87 106 2.054799 ACATAGCCACCATACCGGAAT 58.945 47.619 9.46 0.00 38.63 3.01
96 115 0.991146 ATGGACACACATAGCCACCA 59.009 50.000 0.00 0.00 32.42 4.17
184 209 6.422776 ACTTGCCAGAGAACATAATTTACG 57.577 37.500 0.00 0.00 0.00 3.18
186 211 9.515226 ACTAAACTTGCCAGAGAACATAATTTA 57.485 29.630 0.00 0.00 0.00 1.40
191 216 5.705441 CCAACTAAACTTGCCAGAGAACATA 59.295 40.000 0.00 0.00 0.00 2.29
224 256 4.489679 AAACGAACTGAAGAGGATTTGC 57.510 40.909 0.00 0.00 0.00 3.68
247 279 6.593382 ACTTGCAAGCACAGTAATTTTTGAAA 59.407 30.769 26.27 0.00 0.00 2.69
248 280 6.105333 ACTTGCAAGCACAGTAATTTTTGAA 58.895 32.000 26.27 0.00 0.00 2.69
250 282 5.971895 ACTTGCAAGCACAGTAATTTTTG 57.028 34.783 26.27 0.00 0.00 2.44
258 290 4.270808 GCAAATTTAACTTGCAAGCACAGT 59.729 37.500 26.27 3.99 46.78 3.55
260 292 4.792528 GCAAATTTAACTTGCAAGCACA 57.207 36.364 26.27 8.71 46.78 4.57
271 304 6.665474 TTGCATGATGATGGCAAATTTAAC 57.335 33.333 0.00 0.00 43.82 2.01
300 333 6.790285 AAATCTGACATTTTTCATGGCAAC 57.210 33.333 0.00 0.00 36.48 4.17
330 363 7.929785 AGAAACACCTAAAAATCAGACGTTAGA 59.070 33.333 0.00 0.00 0.00 2.10
335 368 6.539649 TCAGAAACACCTAAAAATCAGACG 57.460 37.500 0.00 0.00 0.00 4.18
347 387 9.533831 ACAAGGAAATAATAATCAGAAACACCT 57.466 29.630 0.00 0.00 0.00 4.00
348 388 9.788960 GACAAGGAAATAATAATCAGAAACACC 57.211 33.333 0.00 0.00 0.00 4.16
356 396 6.038161 CGCAGTGGACAAGGAAATAATAATCA 59.962 38.462 0.00 0.00 0.00 2.57
400 440 0.040958 GTGTGAGCGCTTGGACTTTG 60.041 55.000 13.26 0.00 0.00 2.77
401 441 1.166531 GGTGTGAGCGCTTGGACTTT 61.167 55.000 13.26 0.00 0.00 2.66
424 471 7.665559 ACAAGATTATGTAAGCAAGTTGAGGAA 59.334 33.333 7.16 0.00 0.00 3.36
426 473 7.383102 ACAAGATTATGTAAGCAAGTTGAGG 57.617 36.000 7.16 0.00 0.00 3.86
482 529 3.320541 TCCATGTTAAGCCAACCTTTGTG 59.679 43.478 0.00 0.00 36.20 3.33
487 534 3.737559 TCATCCATGTTAAGCCAACCT 57.262 42.857 0.00 0.00 36.20 3.50
489 536 4.782019 TGTTCATCCATGTTAAGCCAAC 57.218 40.909 0.00 0.00 37.67 3.77
491 538 3.130869 GCATGTTCATCCATGTTAAGCCA 59.869 43.478 0.00 0.00 43.33 4.75
493 540 4.374843 TGCATGTTCATCCATGTTAAGC 57.625 40.909 0.00 0.00 43.33 3.09
494 541 6.198650 TCTTGCATGTTCATCCATGTTAAG 57.801 37.500 0.00 7.95 43.33 1.85
495 542 5.393352 GCTCTTGCATGTTCATCCATGTTAA 60.393 40.000 0.00 0.00 43.33 2.01
517 570 1.269936 GGCAACAAGTTGAGCAATGCT 60.270 47.619 7.79 7.79 42.93 3.79
519 572 1.269206 ACGGCAACAAGTTGAGCAATG 60.269 47.619 16.54 14.17 42.93 2.82
574 631 2.030805 GGCGGGATTTTAGCATGATCAC 60.031 50.000 0.00 0.00 0.00 3.06
616 673 0.610687 ACTGCTAGGTTGTCCTCTGC 59.389 55.000 0.00 0.00 43.94 4.26
665 722 3.641437 TGCATGATCGATCGTCATACA 57.359 42.857 23.41 21.76 34.68 2.29
672 733 4.501921 CAGGTATGTATGCATGATCGATCG 59.498 45.833 20.03 9.36 36.58 3.69
673 734 4.807834 CCAGGTATGTATGCATGATCGATC 59.192 45.833 18.72 18.72 36.58 3.69
676 737 4.192429 TCCAGGTATGTATGCATGATCG 57.808 45.455 10.16 0.00 36.58 3.69
677 738 5.292834 CGAATCCAGGTATGTATGCATGATC 59.707 44.000 10.16 0.33 36.58 2.92
679 740 4.563374 CCGAATCCAGGTATGTATGCATGA 60.563 45.833 10.16 0.00 36.58 3.07
680 741 3.686241 CCGAATCCAGGTATGTATGCATG 59.314 47.826 10.16 0.00 36.58 4.06
681 742 3.869912 GCCGAATCCAGGTATGTATGCAT 60.870 47.826 3.79 3.79 39.03 3.96
682 743 2.549992 GCCGAATCCAGGTATGTATGCA 60.550 50.000 0.00 0.00 0.00 3.96
683 744 2.076863 GCCGAATCCAGGTATGTATGC 58.923 52.381 0.00 0.00 0.00 3.14
684 745 3.685139 AGCCGAATCCAGGTATGTATG 57.315 47.619 0.00 0.00 0.00 2.39
685 746 3.807209 GCAAGCCGAATCCAGGTATGTAT 60.807 47.826 0.00 0.00 0.00 2.29
686 747 2.484770 GCAAGCCGAATCCAGGTATGTA 60.485 50.000 0.00 0.00 0.00 2.29
687 748 1.747206 GCAAGCCGAATCCAGGTATGT 60.747 52.381 0.00 0.00 0.00 2.29
688 749 0.947244 GCAAGCCGAATCCAGGTATG 59.053 55.000 0.00 0.00 0.00 2.39
689 750 0.179018 GGCAAGCCGAATCCAGGTAT 60.179 55.000 0.00 0.00 0.00 2.73
690 751 1.223487 GGCAAGCCGAATCCAGGTA 59.777 57.895 0.00 0.00 0.00 3.08
691 752 2.044946 GGCAAGCCGAATCCAGGT 60.045 61.111 0.00 0.00 0.00 4.00
692 753 2.117156 CAGGCAAGCCGAATCCAGG 61.117 63.158 5.28 0.00 41.95 4.45
693 754 2.768492 GCAGGCAAGCCGAATCCAG 61.768 63.158 5.28 0.00 41.95 3.86
694 755 2.751436 GCAGGCAAGCCGAATCCA 60.751 61.111 5.28 0.00 41.95 3.41
695 756 2.439156 AGCAGGCAAGCCGAATCC 60.439 61.111 5.28 0.00 41.95 3.01
696 757 2.476320 GGAGCAGGCAAGCCGAATC 61.476 63.158 5.28 4.84 41.95 2.52
697 758 2.439156 GGAGCAGGCAAGCCGAAT 60.439 61.111 5.28 0.00 41.95 3.34
698 759 4.722700 GGGAGCAGGCAAGCCGAA 62.723 66.667 5.28 0.00 41.95 4.30
701 762 4.811364 GGAGGGAGCAGGCAAGCC 62.811 72.222 2.02 2.02 34.23 4.35
702 763 4.811364 GGGAGGGAGCAGGCAAGC 62.811 72.222 0.00 0.00 0.00 4.01
703 764 2.687610 ATGGGAGGGAGCAGGCAAG 61.688 63.158 0.00 0.00 0.00 4.01
704 765 2.614969 ATGGGAGGGAGCAGGCAA 60.615 61.111 0.00 0.00 0.00 4.52
705 766 3.414193 CATGGGAGGGAGCAGGCA 61.414 66.667 0.00 0.00 0.00 4.75
706 767 4.891037 GCATGGGAGGGAGCAGGC 62.891 72.222 0.00 0.00 0.00 4.85
707 768 3.095163 AGCATGGGAGGGAGCAGG 61.095 66.667 0.00 0.00 0.00 4.85
708 769 2.509916 GAGCATGGGAGGGAGCAG 59.490 66.667 0.00 0.00 0.00 4.24
709 770 3.092511 GGAGCATGGGAGGGAGCA 61.093 66.667 0.00 0.00 0.00 4.26
710 771 3.883549 GGGAGCATGGGAGGGAGC 61.884 72.222 0.00 0.00 0.00 4.70
711 772 1.773391 ATGGGAGCATGGGAGGGAG 60.773 63.158 0.00 0.00 0.00 4.30
712 773 1.771746 GATGGGAGCATGGGAGGGA 60.772 63.158 0.00 0.00 0.00 4.20
713 774 2.838467 GGATGGGAGCATGGGAGGG 61.838 68.421 0.00 0.00 0.00 4.30
714 775 2.842058 GGATGGGAGCATGGGAGG 59.158 66.667 0.00 0.00 0.00 4.30
715 776 2.429058 CGGATGGGAGCATGGGAG 59.571 66.667 0.00 0.00 0.00 4.30
716 777 2.366837 ACGGATGGGAGCATGGGA 60.367 61.111 0.00 0.00 0.00 4.37
717 778 2.203252 CACGGATGGGAGCATGGG 60.203 66.667 0.00 0.00 0.00 4.00
718 779 2.903855 GCACGGATGGGAGCATGG 60.904 66.667 0.00 0.00 0.00 3.66
719 780 1.512996 GATGCACGGATGGGAGCATG 61.513 60.000 3.23 0.00 46.71 4.06
720 781 2.921435 ATGCACGGATGGGAGCAT 59.079 55.556 0.00 0.00 42.42 3.79
721 782 2.190313 GATGCACGGATGGGAGCA 59.810 61.111 0.00 0.00 41.73 4.26
722 783 2.592861 GGATGCACGGATGGGAGC 60.593 66.667 0.00 0.00 0.00 4.70
723 784 1.524621 GTGGATGCACGGATGGGAG 60.525 63.158 0.10 0.00 0.00 4.30
724 785 1.971505 GAGTGGATGCACGGATGGGA 61.972 60.000 12.02 0.00 0.00 4.37
725 786 1.524621 GAGTGGATGCACGGATGGG 60.525 63.158 12.02 0.00 0.00 4.00
726 787 1.524621 GGAGTGGATGCACGGATGG 60.525 63.158 12.02 0.00 0.00 3.51
727 788 0.179037 ATGGAGTGGATGCACGGATG 60.179 55.000 12.02 0.00 28.84 3.51
728 789 0.107456 GATGGAGTGGATGCACGGAT 59.893 55.000 12.02 5.19 28.84 4.18
729 790 0.977627 AGATGGAGTGGATGCACGGA 60.978 55.000 12.02 0.07 28.84 4.69
730 791 0.107508 AAGATGGAGTGGATGCACGG 60.108 55.000 12.02 0.00 28.84 4.94
731 792 2.205074 GTAAGATGGAGTGGATGCACG 58.795 52.381 12.02 0.00 28.84 5.34
732 793 2.205074 CGTAAGATGGAGTGGATGCAC 58.795 52.381 9.70 9.70 43.02 4.57
733 794 1.138859 CCGTAAGATGGAGTGGATGCA 59.861 52.381 0.00 0.00 43.02 3.96
734 795 1.871080 CCGTAAGATGGAGTGGATGC 58.129 55.000 0.00 0.00 43.02 3.91
735 796 1.414181 AGCCGTAAGATGGAGTGGATG 59.586 52.381 0.00 0.00 43.02 3.51
736 797 1.414181 CAGCCGTAAGATGGAGTGGAT 59.586 52.381 0.00 0.00 43.02 3.41
737 798 0.824109 CAGCCGTAAGATGGAGTGGA 59.176 55.000 0.00 0.00 43.02 4.02
738 799 0.537188 ACAGCCGTAAGATGGAGTGG 59.463 55.000 0.00 0.00 43.02 4.00
739 800 1.478510 AGACAGCCGTAAGATGGAGTG 59.521 52.381 0.00 0.00 43.02 3.51
740 801 1.853963 AGACAGCCGTAAGATGGAGT 58.146 50.000 0.00 0.00 43.02 3.85
741 802 2.969628 AAGACAGCCGTAAGATGGAG 57.030 50.000 0.00 0.00 43.02 3.86
742 803 3.695830 AAAAGACAGCCGTAAGATGGA 57.304 42.857 0.00 0.00 43.02 3.41
743 804 4.003648 AGAAAAAGACAGCCGTAAGATGG 58.996 43.478 0.00 0.00 43.02 3.51
744 805 5.613358 AAGAAAAAGACAGCCGTAAGATG 57.387 39.130 0.00 0.00 43.02 2.90
745 806 6.635030 AAAAGAAAAAGACAGCCGTAAGAT 57.365 33.333 0.00 0.00 43.02 2.40
746 807 6.317893 AGAAAAAGAAAAAGACAGCCGTAAGA 59.682 34.615 0.00 0.00 43.02 2.10
747 808 6.495706 AGAAAAAGAAAAAGACAGCCGTAAG 58.504 36.000 0.00 0.00 0.00 2.34
748 809 6.317893 AGAGAAAAAGAAAAAGACAGCCGTAA 59.682 34.615 0.00 0.00 0.00 3.18
749 810 5.820947 AGAGAAAAAGAAAAAGACAGCCGTA 59.179 36.000 0.00 0.00 0.00 4.02
750 811 4.640647 AGAGAAAAAGAAAAAGACAGCCGT 59.359 37.500 0.00 0.00 0.00 5.68
751 812 5.175090 AGAGAAAAAGAAAAAGACAGCCG 57.825 39.130 0.00 0.00 0.00 5.52
752 813 7.261325 AGAAAGAGAAAAAGAAAAAGACAGCC 58.739 34.615 0.00 0.00 0.00 4.85
753 814 9.788960 TTAGAAAGAGAAAAAGAAAAAGACAGC 57.211 29.630 0.00 0.00 0.00 4.40
768 829 9.853177 GGGGAAATGATTAGATTAGAAAGAGAA 57.147 33.333 0.00 0.00 0.00 2.87
769 830 9.230477 AGGGGAAATGATTAGATTAGAAAGAGA 57.770 33.333 0.00 0.00 0.00 3.10
770 831 9.500785 GAGGGGAAATGATTAGATTAGAAAGAG 57.499 37.037 0.00 0.00 0.00 2.85
771 832 8.440771 GGAGGGGAAATGATTAGATTAGAAAGA 58.559 37.037 0.00 0.00 0.00 2.52
772 833 8.443979 AGGAGGGGAAATGATTAGATTAGAAAG 58.556 37.037 0.00 0.00 0.00 2.62
773 834 8.220559 CAGGAGGGGAAATGATTAGATTAGAAA 58.779 37.037 0.00 0.00 0.00 2.52
774 835 7.572485 TCAGGAGGGGAAATGATTAGATTAGAA 59.428 37.037 0.00 0.00 0.00 2.10
775 836 7.082316 TCAGGAGGGGAAATGATTAGATTAGA 58.918 38.462 0.00 0.00 0.00 2.10
776 837 7.321717 TCAGGAGGGGAAATGATTAGATTAG 57.678 40.000 0.00 0.00 0.00 1.73
777 838 7.895144 ATCAGGAGGGGAAATGATTAGATTA 57.105 36.000 0.00 0.00 0.00 1.75
778 839 6.793518 ATCAGGAGGGGAAATGATTAGATT 57.206 37.500 0.00 0.00 0.00 2.40
779 840 6.793518 AATCAGGAGGGGAAATGATTAGAT 57.206 37.500 0.00 0.00 39.85 1.98
780 841 6.596869 AAATCAGGAGGGGAAATGATTAGA 57.403 37.500 0.15 0.00 40.54 2.10
781 842 8.766994 TTAAAATCAGGAGGGGAAATGATTAG 57.233 34.615 0.15 0.00 40.54 1.73
782 843 7.784550 CCTTAAAATCAGGAGGGGAAATGATTA 59.215 37.037 0.15 0.00 40.54 1.75
783 844 6.612863 CCTTAAAATCAGGAGGGGAAATGATT 59.387 38.462 0.00 0.00 42.61 2.57
784 845 6.138967 CCTTAAAATCAGGAGGGGAAATGAT 58.861 40.000 0.00 0.00 32.41 2.45
785 846 5.518865 CCTTAAAATCAGGAGGGGAAATGA 58.481 41.667 0.00 0.00 32.41 2.57
786 847 4.651045 CCCTTAAAATCAGGAGGGGAAATG 59.349 45.833 0.00 0.00 44.21 2.32
787 848 4.883759 CCCTTAAAATCAGGAGGGGAAAT 58.116 43.478 0.00 0.00 44.21 2.17
788 849 4.331159 CCCTTAAAATCAGGAGGGGAAA 57.669 45.455 0.00 0.00 44.21 3.13
795 856 3.537337 TCCCACTCCCTTAAAATCAGGA 58.463 45.455 0.00 0.00 32.41 3.86
796 857 4.017126 GTTCCCACTCCCTTAAAATCAGG 58.983 47.826 0.00 0.00 0.00 3.86
797 858 3.689649 CGTTCCCACTCCCTTAAAATCAG 59.310 47.826 0.00 0.00 0.00 2.90
798 859 3.560453 CCGTTCCCACTCCCTTAAAATCA 60.560 47.826 0.00 0.00 0.00 2.57
799 860 3.014623 CCGTTCCCACTCCCTTAAAATC 58.985 50.000 0.00 0.00 0.00 2.17
800 861 2.291346 CCCGTTCCCACTCCCTTAAAAT 60.291 50.000 0.00 0.00 0.00 1.82
801 862 1.074244 CCCGTTCCCACTCCCTTAAAA 59.926 52.381 0.00 0.00 0.00 1.52
802 863 0.694196 CCCGTTCCCACTCCCTTAAA 59.306 55.000 0.00 0.00 0.00 1.52
803 864 1.844544 GCCCGTTCCCACTCCCTTAA 61.845 60.000 0.00 0.00 0.00 1.85
804 865 2.295602 GCCCGTTCCCACTCCCTTA 61.296 63.158 0.00 0.00 0.00 2.69
805 866 3.647771 GCCCGTTCCCACTCCCTT 61.648 66.667 0.00 0.00 0.00 3.95
808 869 1.632965 ATAAGGCCCGTTCCCACTCC 61.633 60.000 0.00 0.00 0.00 3.85
809 870 0.255033 AATAAGGCCCGTTCCCACTC 59.745 55.000 0.00 0.00 0.00 3.51
810 871 0.702316 AAATAAGGCCCGTTCCCACT 59.298 50.000 0.00 0.00 0.00 4.00
811 872 1.203758 CAAAATAAGGCCCGTTCCCAC 59.796 52.381 0.00 0.00 0.00 4.61
812 873 1.203075 ACAAAATAAGGCCCGTTCCCA 60.203 47.619 0.00 0.00 0.00 4.37
813 874 1.552578 ACAAAATAAGGCCCGTTCCC 58.447 50.000 0.00 0.00 0.00 3.97
814 875 2.094390 GGAACAAAATAAGGCCCGTTCC 60.094 50.000 0.00 7.15 43.87 3.62
815 876 2.559231 TGGAACAAAATAAGGCCCGTTC 59.441 45.455 0.00 1.33 31.92 3.95
816 877 2.599677 TGGAACAAAATAAGGCCCGTT 58.400 42.857 0.00 0.00 31.92 4.44
817 878 2.296073 TGGAACAAAATAAGGCCCGT 57.704 45.000 0.00 0.00 31.92 5.28
830 891 3.367190 CGTGGCATGATTTGATTGGAACA 60.367 43.478 0.00 0.00 0.00 3.18
831 892 3.181397 CGTGGCATGATTTGATTGGAAC 58.819 45.455 0.00 0.00 0.00 3.62
832 893 2.824936 ACGTGGCATGATTTGATTGGAA 59.175 40.909 14.82 0.00 0.00 3.53
833 894 2.445427 ACGTGGCATGATTTGATTGGA 58.555 42.857 14.82 0.00 0.00 3.53
834 895 2.945447 ACGTGGCATGATTTGATTGG 57.055 45.000 14.82 0.00 0.00 3.16
835 896 3.732219 GCATACGTGGCATGATTTGATTG 59.268 43.478 14.82 1.54 0.00 2.67
836 897 3.548616 CGCATACGTGGCATGATTTGATT 60.549 43.478 14.82 0.00 33.53 2.57
837 898 2.031769 CGCATACGTGGCATGATTTGAT 60.032 45.455 14.82 0.00 33.53 2.57
838 899 1.330213 CGCATACGTGGCATGATTTGA 59.670 47.619 14.82 0.00 33.53 2.69
839 900 1.597690 CCGCATACGTGGCATGATTTG 60.598 52.381 14.82 8.58 35.59 2.32
840 901 0.662619 CCGCATACGTGGCATGATTT 59.337 50.000 14.82 0.00 35.59 2.17
841 902 1.165907 CCCGCATACGTGGCATGATT 61.166 55.000 14.82 0.00 41.87 2.57
842 903 1.597854 CCCGCATACGTGGCATGAT 60.598 57.895 14.82 0.00 41.87 2.45
843 904 2.203001 CCCGCATACGTGGCATGA 60.203 61.111 14.82 0.00 41.87 3.07
844 905 2.203001 TCCCGCATACGTGGCATG 60.203 61.111 4.87 4.87 41.87 4.06
845 906 2.108976 CTCCCGCATACGTGGCAT 59.891 61.111 13.38 0.00 41.87 4.40
846 907 4.830765 GCTCCCGCATACGTGGCA 62.831 66.667 13.38 0.00 41.87 4.92
847 908 4.830765 TGCTCCCGCATACGTGGC 62.831 66.667 0.00 0.21 42.25 5.01
878 939 2.359230 ACTTGCCTGCTTCTCGGC 60.359 61.111 0.00 0.00 46.46 5.54
879 940 0.739112 GAGACTTGCCTGCTTCTCGG 60.739 60.000 0.00 0.00 0.00 4.63
880 941 2.748268 GAGACTTGCCTGCTTCTCG 58.252 57.895 0.00 0.00 0.00 4.04
881 942 0.037790 ACGAGACTTGCCTGCTTCTC 60.038 55.000 0.00 6.13 0.00 2.87
882 943 0.037790 GACGAGACTTGCCTGCTTCT 60.038 55.000 0.00 0.00 0.00 2.85
883 944 1.016653 GGACGAGACTTGCCTGCTTC 61.017 60.000 0.00 0.00 0.00 3.86
884 945 1.004440 GGACGAGACTTGCCTGCTT 60.004 57.895 0.00 0.00 0.00 3.91
885 946 0.612174 TAGGACGAGACTTGCCTGCT 60.612 55.000 13.19 0.00 32.04 4.24
886 947 0.458716 GTAGGACGAGACTTGCCTGC 60.459 60.000 13.19 9.53 32.04 4.85
887 948 0.888619 TGTAGGACGAGACTTGCCTG 59.111 55.000 13.19 0.00 32.04 4.85
888 949 1.853963 ATGTAGGACGAGACTTGCCT 58.146 50.000 9.72 9.72 34.56 4.75
889 950 2.223758 GGTATGTAGGACGAGACTTGCC 60.224 54.545 0.00 0.00 0.00 4.52
890 951 2.688958 AGGTATGTAGGACGAGACTTGC 59.311 50.000 0.00 0.00 0.00 4.01
891 952 5.505985 GCTTAGGTATGTAGGACGAGACTTG 60.506 48.000 0.00 0.00 0.00 3.16
892 953 4.579753 GCTTAGGTATGTAGGACGAGACTT 59.420 45.833 0.00 0.00 0.00 3.01
893 954 4.136051 GCTTAGGTATGTAGGACGAGACT 58.864 47.826 0.00 0.00 0.00 3.24
894 955 4.136051 AGCTTAGGTATGTAGGACGAGAC 58.864 47.826 0.00 0.00 0.00 3.36
895 956 4.434545 AGCTTAGGTATGTAGGACGAGA 57.565 45.455 0.00 0.00 0.00 4.04
896 957 6.821031 AATAGCTTAGGTATGTAGGACGAG 57.179 41.667 4.61 0.00 0.00 4.18
897 958 6.369890 CGTAATAGCTTAGGTATGTAGGACGA 59.630 42.308 4.61 0.00 0.00 4.20
898 959 6.541086 CGTAATAGCTTAGGTATGTAGGACG 58.459 44.000 4.61 6.68 0.00 4.79
899 960 6.320944 GCGTAATAGCTTAGGTATGTAGGAC 58.679 44.000 4.61 0.00 0.00 3.85
900 961 5.416952 GGCGTAATAGCTTAGGTATGTAGGA 59.583 44.000 4.61 0.00 37.29 2.94
901 962 5.648572 GGCGTAATAGCTTAGGTATGTAGG 58.351 45.833 4.61 6.78 37.29 3.18
918 979 1.355971 GATCAAGCTGTTCGGCGTAA 58.644 50.000 6.85 0.00 37.29 3.18
925 986 1.133790 GTGCATGGGATCAAGCTGTTC 59.866 52.381 0.00 0.00 38.31 3.18
981 1046 1.554836 TGAGAGCTTGGAGAGAGTGG 58.445 55.000 0.00 0.00 0.00 4.00
1244 1336 4.409588 CGAGAACGTTGGCGCACG 62.410 66.667 17.52 17.52 46.04 5.34
1404 1496 1.142748 GAGGAGGCTGATGTCCACG 59.857 63.158 0.00 0.00 35.02 4.94
1479 1571 0.303493 CAGTTGCAACAGTACGCGTT 59.697 50.000 30.11 0.00 0.00 4.84
1504 1600 0.594796 CAAATCTTATTGGGCGGCGC 60.595 55.000 26.17 26.17 0.00 6.53
1505 1601 0.594796 GCAAATCTTATTGGGCGGCG 60.595 55.000 0.51 0.51 0.00 6.46
1506 1602 0.746659 AGCAAATCTTATTGGGCGGC 59.253 50.000 0.00 0.00 0.00 6.53
1507 1603 3.525268 AAAGCAAATCTTATTGGGCGG 57.475 42.857 0.00 0.00 33.88 6.13
1559 2914 3.608073 GCTGGTTACAACGATTCAAATGC 59.392 43.478 0.00 0.00 0.00 3.56
1604 2959 1.873591 ACGAAGAGCACATGGTTGTTC 59.126 47.619 0.00 0.00 32.34 3.18
1653 3668 8.416329 CAAAAGGGCAATTAACTAGAGCAATAT 58.584 33.333 0.00 0.00 0.00 1.28
1718 3741 1.592110 GCTACAATGTGTATGTGCGCG 60.592 52.381 0.00 0.00 31.66 6.86
1759 3787 2.588034 GCGGGGTAAGGCGTCATC 60.588 66.667 0.00 0.00 0.00 2.92
1760 3788 2.472414 TTTGCGGGGTAAGGCGTCAT 62.472 55.000 0.00 0.00 0.00 3.06
1761 3789 2.677765 TTTTGCGGGGTAAGGCGTCA 62.678 55.000 0.00 0.00 0.00 4.35
1762 3790 1.517210 TTTTTGCGGGGTAAGGCGTC 61.517 55.000 0.00 0.00 0.00 5.19
1763 3791 1.528776 TTTTTGCGGGGTAAGGCGT 60.529 52.632 0.00 0.00 0.00 5.68
1764 3792 3.356837 TTTTTGCGGGGTAAGGCG 58.643 55.556 0.00 0.00 0.00 5.52
1780 3808 4.691216 GTGAGGCGTCATCTAGTTCTTTTT 59.309 41.667 12.93 0.00 34.36 1.94
1781 3809 4.246458 GTGAGGCGTCATCTAGTTCTTTT 58.754 43.478 12.93 0.00 34.36 2.27
1782 3810 3.258372 TGTGAGGCGTCATCTAGTTCTTT 59.742 43.478 12.93 0.00 34.36 2.52
1783 3811 2.826128 TGTGAGGCGTCATCTAGTTCTT 59.174 45.455 12.93 0.00 34.36 2.52
1784 3812 2.164624 GTGTGAGGCGTCATCTAGTTCT 59.835 50.000 12.93 0.00 34.36 3.01
1785 3813 2.531206 GTGTGAGGCGTCATCTAGTTC 58.469 52.381 12.93 0.00 34.36 3.01
1786 3814 1.135373 CGTGTGAGGCGTCATCTAGTT 60.135 52.381 12.93 0.00 34.36 2.24
1787 3815 0.452184 CGTGTGAGGCGTCATCTAGT 59.548 55.000 12.93 0.00 34.36 2.57
1788 3816 0.452184 ACGTGTGAGGCGTCATCTAG 59.548 55.000 12.93 7.37 38.23 2.43
1789 3817 0.885879 AACGTGTGAGGCGTCATCTA 59.114 50.000 12.93 0.00 42.10 1.98
1790 3818 0.885879 TAACGTGTGAGGCGTCATCT 59.114 50.000 12.93 0.00 42.10 2.90
1791 3819 0.989890 GTAACGTGTGAGGCGTCATC 59.010 55.000 12.93 8.22 42.10 2.92
1792 3820 0.601558 AGTAACGTGTGAGGCGTCAT 59.398 50.000 12.93 0.00 42.10 3.06
1804 3832 2.656069 ATGGCTCCCGCAGTAACGT 61.656 57.895 0.00 0.00 38.10 3.99
1805 3833 2.173669 CATGGCTCCCGCAGTAACG 61.174 63.158 0.00 0.00 38.10 3.18
1806 3834 2.472909 GCATGGCTCCCGCAGTAAC 61.473 63.158 0.00 0.00 38.10 2.50
1807 3835 2.124736 GCATGGCTCCCGCAGTAA 60.125 61.111 0.00 0.00 38.10 2.24
1808 3836 4.175337 GGCATGGCTCCCGCAGTA 62.175 66.667 12.86 0.00 38.10 2.74
1811 3839 4.675161 TTTGGCATGGCTCCCGCA 62.675 61.111 21.08 0.00 38.10 5.69
1812 3840 3.381136 TTTTGGCATGGCTCCCGC 61.381 61.111 21.08 0.00 0.00 6.13
1813 3841 1.814772 TTGTTTTGGCATGGCTCCCG 61.815 55.000 21.08 0.00 0.00 5.14
1814 3842 0.396060 TTTGTTTTGGCATGGCTCCC 59.604 50.000 21.08 6.36 0.00 4.30
1887 3915 8.394877 CGGCAAATTGATGTAAACAGATAACTA 58.605 33.333 0.00 0.00 0.00 2.24
1888 3916 7.250569 CGGCAAATTGATGTAAACAGATAACT 58.749 34.615 0.00 0.00 0.00 2.24
1889 3917 6.020678 GCGGCAAATTGATGTAAACAGATAAC 60.021 38.462 0.00 0.00 0.00 1.89
1890 3918 6.033341 GCGGCAAATTGATGTAAACAGATAA 58.967 36.000 0.00 0.00 0.00 1.75
1891 3919 5.124617 TGCGGCAAATTGATGTAAACAGATA 59.875 36.000 0.00 0.00 0.00 1.98
1892 3920 4.082300 TGCGGCAAATTGATGTAAACAGAT 60.082 37.500 0.00 0.00 0.00 2.90
1893 3921 3.254411 TGCGGCAAATTGATGTAAACAGA 59.746 39.130 0.00 0.00 0.00 3.41
1894 3922 3.573598 TGCGGCAAATTGATGTAAACAG 58.426 40.909 0.00 0.00 0.00 3.16
1895 3923 3.650070 TGCGGCAAATTGATGTAAACA 57.350 38.095 0.00 0.00 0.00 2.83
1896 3924 4.210120 TGTTTGCGGCAAATTGATGTAAAC 59.790 37.500 28.59 14.28 35.74 2.01
1897 3925 4.210120 GTGTTTGCGGCAAATTGATGTAAA 59.790 37.500 28.59 1.85 35.74 2.01
1898 3926 3.738282 GTGTTTGCGGCAAATTGATGTAA 59.262 39.130 28.59 2.61 35.74 2.41
1899 3927 3.243535 TGTGTTTGCGGCAAATTGATGTA 60.244 39.130 28.59 10.42 35.74 2.29
1900 3928 2.134346 GTGTTTGCGGCAAATTGATGT 58.866 42.857 28.59 0.00 35.74 3.06
1901 3929 2.133553 TGTGTTTGCGGCAAATTGATG 58.866 42.857 28.59 0.00 35.74 3.07
1902 3930 2.224018 ACTGTGTTTGCGGCAAATTGAT 60.224 40.909 28.59 12.59 35.74 2.57
1903 3931 1.135915 ACTGTGTTTGCGGCAAATTGA 59.864 42.857 28.59 14.48 35.74 2.57
1904 3932 1.258458 CACTGTGTTTGCGGCAAATTG 59.742 47.619 28.59 19.94 35.74 2.32
1905 3933 1.135915 TCACTGTGTTTGCGGCAAATT 59.864 42.857 28.59 10.26 35.74 1.82
1906 3934 0.743688 TCACTGTGTTTGCGGCAAAT 59.256 45.000 28.59 11.66 35.74 2.32
1907 3935 0.100325 CTCACTGTGTTTGCGGCAAA 59.900 50.000 23.23 23.23 0.00 3.68
1908 3936 1.723608 CCTCACTGTGTTTGCGGCAA 61.724 55.000 12.11 12.11 0.00 4.52
1909 3937 2.186160 CCTCACTGTGTTTGCGGCA 61.186 57.895 7.79 0.00 0.00 5.69
1910 3938 2.639286 CCTCACTGTGTTTGCGGC 59.361 61.111 7.79 0.00 0.00 6.53
1911 3939 2.639286 GCCTCACTGTGTTTGCGG 59.361 61.111 7.79 3.59 0.00 5.69
1912 3940 2.186160 TGGCCTCACTGTGTTTGCG 61.186 57.895 3.32 0.00 0.00 4.85
1913 3941 1.360192 GTGGCCTCACTGTGTTTGC 59.640 57.895 3.32 8.73 40.58 3.68
1914 3942 1.648720 CGTGGCCTCACTGTGTTTG 59.351 57.895 3.32 0.00 41.53 2.93
1915 3943 2.186826 GCGTGGCCTCACTGTGTTT 61.187 57.895 3.32 0.00 41.53 2.83
1916 3944 2.591715 GCGTGGCCTCACTGTGTT 60.592 61.111 3.32 0.00 41.53 3.32
1917 3945 4.969196 CGCGTGGCCTCACTGTGT 62.969 66.667 3.32 0.00 41.53 3.72
1938 3966 4.704833 TTCCTCAGCCAGCCACGC 62.705 66.667 0.00 0.00 0.00 5.34
1939 3967 1.372087 GATTTCCTCAGCCAGCCACG 61.372 60.000 0.00 0.00 0.00 4.94
1940 3968 0.034670 AGATTTCCTCAGCCAGCCAC 60.035 55.000 0.00 0.00 0.00 5.01
1941 3969 0.254178 GAGATTTCCTCAGCCAGCCA 59.746 55.000 0.00 0.00 41.58 4.75
1942 3970 0.465278 GGAGATTTCCTCAGCCAGCC 60.465 60.000 0.00 0.00 43.76 4.85
1943 3971 3.092851 GGAGATTTCCTCAGCCAGC 57.907 57.895 0.00 0.00 43.76 4.85
1952 3980 7.455008 TGGAGATTAGTGGTATAGGAGATTTCC 59.545 40.741 0.00 0.00 44.39 3.13
1953 3981 8.423906 TGGAGATTAGTGGTATAGGAGATTTC 57.576 38.462 0.00 0.00 0.00 2.17
1954 3982 8.013667 ACTGGAGATTAGTGGTATAGGAGATTT 58.986 37.037 0.00 0.00 0.00 2.17
1955 3983 7.540183 ACTGGAGATTAGTGGTATAGGAGATT 58.460 38.462 0.00 0.00 0.00 2.40
1956 3984 7.109901 ACTGGAGATTAGTGGTATAGGAGAT 57.890 40.000 0.00 0.00 0.00 2.75
1957 3985 6.532119 ACTGGAGATTAGTGGTATAGGAGA 57.468 41.667 0.00 0.00 0.00 3.71
1958 3986 8.887264 ATAACTGGAGATTAGTGGTATAGGAG 57.113 38.462 0.00 0.00 0.00 3.69
1959 3987 7.894364 GGATAACTGGAGATTAGTGGTATAGGA 59.106 40.741 0.00 0.00 0.00 2.94
1960 3988 7.124448 GGGATAACTGGAGATTAGTGGTATAGG 59.876 44.444 0.00 0.00 0.00 2.57
1961 3989 7.896496 AGGGATAACTGGAGATTAGTGGTATAG 59.104 40.741 0.00 0.00 0.00 1.31
1962 3990 7.776745 AGGGATAACTGGAGATTAGTGGTATA 58.223 38.462 0.00 0.00 0.00 1.47
1963 3991 6.635021 AGGGATAACTGGAGATTAGTGGTAT 58.365 40.000 0.00 0.00 0.00 2.73
1964 3992 6.039415 AGGGATAACTGGAGATTAGTGGTA 57.961 41.667 0.00 0.00 0.00 3.25
1965 3993 4.897051 AGGGATAACTGGAGATTAGTGGT 58.103 43.478 0.00 0.00 0.00 4.16
1966 3994 5.896073 AAGGGATAACTGGAGATTAGTGG 57.104 43.478 0.00 0.00 0.00 4.00
1967 3995 6.058183 CCAAAGGGATAACTGGAGATTAGTG 58.942 44.000 0.00 0.00 35.59 2.74
1968 3996 5.970640 TCCAAAGGGATAACTGGAGATTAGT 59.029 40.000 0.00 0.00 38.64 2.24
1969 3997 6.500589 TCCAAAGGGATAACTGGAGATTAG 57.499 41.667 0.00 0.00 38.64 1.73
1970 3998 6.447084 ACTTCCAAAGGGATAACTGGAGATTA 59.553 38.462 0.00 0.00 44.48 1.75
1971 3999 5.254032 ACTTCCAAAGGGATAACTGGAGATT 59.746 40.000 0.00 0.00 44.48 2.40
1972 4000 4.790790 ACTTCCAAAGGGATAACTGGAGAT 59.209 41.667 0.00 0.00 44.48 2.75
1973 4001 4.175962 ACTTCCAAAGGGATAACTGGAGA 58.824 43.478 0.00 0.00 44.48 3.71
1974 4002 4.576330 ACTTCCAAAGGGATAACTGGAG 57.424 45.455 0.00 0.00 44.48 3.86
1975 4003 4.508405 CCAACTTCCAAAGGGATAACTGGA 60.508 45.833 0.00 0.00 44.48 3.86
1976 4004 3.763897 CCAACTTCCAAAGGGATAACTGG 59.236 47.826 0.00 0.00 44.48 4.00
1977 4005 4.662278 TCCAACTTCCAAAGGGATAACTG 58.338 43.478 0.00 0.00 44.48 3.16
1978 4006 5.333566 TTCCAACTTCCAAAGGGATAACT 57.666 39.130 0.00 0.00 44.48 2.24
1979 4007 6.605471 AATTCCAACTTCCAAAGGGATAAC 57.395 37.500 0.00 0.00 44.48 1.89
1980 4008 6.013812 CCAAATTCCAACTTCCAAAGGGATAA 60.014 38.462 0.00 0.00 44.48 1.75
1981 4009 5.483583 CCAAATTCCAACTTCCAAAGGGATA 59.516 40.000 0.00 0.00 44.48 2.59
1982 4010 4.286808 CCAAATTCCAACTTCCAAAGGGAT 59.713 41.667 0.00 0.00 44.48 3.85
1983 4011 3.645687 CCAAATTCCAACTTCCAAAGGGA 59.354 43.478 0.00 0.00 43.03 4.20
1984 4012 3.244526 CCCAAATTCCAACTTCCAAAGGG 60.245 47.826 0.00 0.00 0.00 3.95
1985 4013 4.006780 CCCAAATTCCAACTTCCAAAGG 57.993 45.455 0.00 0.00 0.00 3.11
2327 4355 0.395686 ACATCAGGCCCGATCTCATG 59.604 55.000 0.00 0.00 0.00 3.07
2328 4356 1.071385 GAACATCAGGCCCGATCTCAT 59.929 52.381 0.00 0.00 0.00 2.90
2329 4357 0.465705 GAACATCAGGCCCGATCTCA 59.534 55.000 0.00 0.00 0.00 3.27
2330 4358 0.755686 AGAACATCAGGCCCGATCTC 59.244 55.000 0.00 0.00 0.00 2.75
2331 4359 1.207791 AAGAACATCAGGCCCGATCT 58.792 50.000 0.00 0.00 0.00 2.75
2332 4360 2.044123 AAAGAACATCAGGCCCGATC 57.956 50.000 0.00 0.00 0.00 3.69
2333 4361 2.514458 AAAAGAACATCAGGCCCGAT 57.486 45.000 0.00 0.00 0.00 4.18
2334 4362 2.286365 AAAAAGAACATCAGGCCCGA 57.714 45.000 0.00 0.00 0.00 5.14
2371 4399 3.984193 ACAGAAGGCCTGCATCGGC 62.984 63.158 15.05 8.45 46.81 5.54
2372 4400 1.817099 GACAGAAGGCCTGCATCGG 60.817 63.158 15.05 7.56 46.81 4.18
2373 4401 0.809241 GAGACAGAAGGCCTGCATCG 60.809 60.000 15.05 3.07 46.81 3.84
2374 4402 0.809241 CGAGACAGAAGGCCTGCATC 60.809 60.000 15.05 10.37 46.81 3.91
2375 4403 1.220206 CGAGACAGAAGGCCTGCAT 59.780 57.895 15.05 0.00 46.81 3.96
2376 4404 2.659016 CGAGACAGAAGGCCTGCA 59.341 61.111 15.05 0.00 46.81 4.41
2377 4405 2.817396 GCGAGACAGAAGGCCTGC 60.817 66.667 5.69 3.13 46.81 4.85
2379 4407 3.394836 GGGCGAGACAGAAGGCCT 61.395 66.667 0.00 0.00 45.77 5.19
2381 4409 1.522580 GATGGGCGAGACAGAAGGC 60.523 63.158 0.00 0.00 0.00 4.35
2382 4410 0.103937 GAGATGGGCGAGACAGAAGG 59.896 60.000 0.00 0.00 0.00 3.46
2383 4411 1.110442 AGAGATGGGCGAGACAGAAG 58.890 55.000 0.00 0.00 0.00 2.85
2384 4412 0.820226 CAGAGATGGGCGAGACAGAA 59.180 55.000 0.00 0.00 0.00 3.02
2385 4413 1.039785 CCAGAGATGGGCGAGACAGA 61.040 60.000 0.00 0.00 0.00 3.41
2386 4414 1.326213 ACCAGAGATGGGCGAGACAG 61.326 60.000 0.00 0.00 0.00 3.51
2387 4415 0.904865 AACCAGAGATGGGCGAGACA 60.905 55.000 0.00 0.00 0.00 3.41
2388 4416 0.460987 CAACCAGAGATGGGCGAGAC 60.461 60.000 0.00 0.00 0.00 3.36
2389 4417 0.904865 ACAACCAGAGATGGGCGAGA 60.905 55.000 0.00 0.00 0.00 4.04
2390 4418 0.742281 CACAACCAGAGATGGGCGAG 60.742 60.000 0.00 0.00 0.00 5.03
2391 4419 1.191489 TCACAACCAGAGATGGGCGA 61.191 55.000 0.00 0.00 0.00 5.54
2392 4420 1.021390 GTCACAACCAGAGATGGGCG 61.021 60.000 0.00 0.00 0.00 6.13
2393 4421 0.036732 TGTCACAACCAGAGATGGGC 59.963 55.000 0.00 0.00 0.00 5.36
2394 4422 2.154462 GTTGTCACAACCAGAGATGGG 58.846 52.381 9.76 0.00 0.00 4.00
2395 4423 2.154462 GGTTGTCACAACCAGAGATGG 58.846 52.381 31.41 0.00 40.03 3.51
2396 4424 2.154462 GGGTTGTCACAACCAGAGATG 58.846 52.381 35.41 0.00 42.03 2.90
2397 4425 1.774254 TGGGTTGTCACAACCAGAGAT 59.226 47.619 35.41 0.00 42.03 2.75
2398 4426 1.208706 TGGGTTGTCACAACCAGAGA 58.791 50.000 35.41 16.84 42.03 3.10
2399 4427 2.154462 GATGGGTTGTCACAACCAGAG 58.846 52.381 35.41 0.00 42.03 3.35
2400 4428 1.774254 AGATGGGTTGTCACAACCAGA 59.226 47.619 35.41 23.80 42.03 3.86
2401 4429 2.154462 GAGATGGGTTGTCACAACCAG 58.846 52.381 35.41 0.00 42.03 4.00
2402 4430 1.202879 GGAGATGGGTTGTCACAACCA 60.203 52.381 35.41 23.58 42.03 3.67
2403 4431 1.073923 AGGAGATGGGTTGTCACAACC 59.926 52.381 29.12 29.12 39.56 3.77
2404 4432 2.427506 GAGGAGATGGGTTGTCACAAC 58.572 52.381 12.63 12.63 0.00 3.32
2405 4433 1.351017 GGAGGAGATGGGTTGTCACAA 59.649 52.381 0.00 0.00 0.00 3.33
2406 4434 0.984230 GGAGGAGATGGGTTGTCACA 59.016 55.000 0.00 0.00 0.00 3.58
2407 4435 0.253327 GGGAGGAGATGGGTTGTCAC 59.747 60.000 0.00 0.00 0.00 3.67
2408 4436 0.178876 TGGGAGGAGATGGGTTGTCA 60.179 55.000 0.00 0.00 0.00 3.58
2409 4437 1.133976 CATGGGAGGAGATGGGTTGTC 60.134 57.143 0.00 0.00 0.00 3.18
2410 4438 0.921896 CATGGGAGGAGATGGGTTGT 59.078 55.000 0.00 0.00 0.00 3.32
2411 4439 0.466922 GCATGGGAGGAGATGGGTTG 60.467 60.000 0.00 0.00 0.00 3.77
2412 4440 1.649271 GGCATGGGAGGAGATGGGTT 61.649 60.000 0.00 0.00 0.00 4.11
2413 4441 2.081161 GGCATGGGAGGAGATGGGT 61.081 63.158 0.00 0.00 0.00 4.51
2414 4442 2.838467 GGGCATGGGAGGAGATGGG 61.838 68.421 0.00 0.00 0.00 4.00
2415 4443 1.432852 ATGGGCATGGGAGGAGATGG 61.433 60.000 0.00 0.00 0.00 3.51
2416 4444 1.281287 CTATGGGCATGGGAGGAGATG 59.719 57.143 0.00 0.00 0.00 2.90
2417 4445 1.132267 ACTATGGGCATGGGAGGAGAT 60.132 52.381 0.00 0.00 0.00 2.75
2418 4446 0.268869 ACTATGGGCATGGGAGGAGA 59.731 55.000 0.00 0.00 0.00 3.71
2419 4447 0.399454 CACTATGGGCATGGGAGGAG 59.601 60.000 0.00 0.00 0.00 3.69
2420 4448 1.061905 CCACTATGGGCATGGGAGGA 61.062 60.000 0.00 0.00 32.67 3.71
2421 4449 1.061905 TCCACTATGGGCATGGGAGG 61.062 60.000 0.00 0.00 38.32 4.30
2422 4450 0.109342 GTCCACTATGGGCATGGGAG 59.891 60.000 0.00 0.00 42.98 4.30
2423 4451 1.352622 GGTCCACTATGGGCATGGGA 61.353 60.000 1.25 0.00 45.98 4.37
2424 4452 1.151450 GGTCCACTATGGGCATGGG 59.849 63.158 1.25 0.00 45.98 4.00
2425 4453 0.109342 GAGGTCCACTATGGGCATGG 59.891 60.000 1.25 0.00 45.98 3.66
2426 4454 0.839277 TGAGGTCCACTATGGGCATG 59.161 55.000 1.25 0.00 45.98 4.06
2427 4455 1.422781 CATGAGGTCCACTATGGGCAT 59.577 52.381 1.25 0.00 45.98 4.40
2428 4456 0.839277 CATGAGGTCCACTATGGGCA 59.161 55.000 1.25 0.00 45.98 5.36
2429 4457 0.536006 GCATGAGGTCCACTATGGGC 60.536 60.000 0.00 0.00 42.67 5.36
2430 4458 0.109342 GGCATGAGGTCCACTATGGG 59.891 60.000 0.00 0.00 38.32 4.00
2431 4459 0.839277 TGGCATGAGGTCCACTATGG 59.161 55.000 0.00 0.00 39.43 2.74
2432 4460 2.945080 ATGGCATGAGGTCCACTATG 57.055 50.000 0.00 0.00 34.81 2.23
2433 4461 4.848660 AGAATATGGCATGAGGTCCACTAT 59.151 41.667 10.98 0.00 34.81 2.12
2434 4462 4.234550 AGAATATGGCATGAGGTCCACTA 58.765 43.478 10.98 0.00 34.81 2.74
2435 4463 3.051581 AGAATATGGCATGAGGTCCACT 58.948 45.455 10.98 0.00 34.81 4.00
2436 4464 3.498774 AGAATATGGCATGAGGTCCAC 57.501 47.619 10.98 0.00 34.81 4.02
2437 4465 3.718434 AGAAGAATATGGCATGAGGTCCA 59.282 43.478 10.98 0.00 36.70 4.02
2438 4466 4.322567 GAGAAGAATATGGCATGAGGTCC 58.677 47.826 10.98 0.00 0.00 4.46
2439 4467 4.322567 GGAGAAGAATATGGCATGAGGTC 58.677 47.826 10.98 1.99 0.00 3.85
2440 4468 3.073650 GGGAGAAGAATATGGCATGAGGT 59.926 47.826 10.98 0.00 0.00 3.85
2441 4469 3.560882 GGGGAGAAGAATATGGCATGAGG 60.561 52.174 10.98 0.00 0.00 3.86
2442 4470 3.560882 GGGGGAGAAGAATATGGCATGAG 60.561 52.174 10.98 0.00 0.00 2.90
2443 4471 2.376518 GGGGGAGAAGAATATGGCATGA 59.623 50.000 10.98 0.00 0.00 3.07
2444 4472 2.377869 AGGGGGAGAAGAATATGGCATG 59.622 50.000 10.98 0.00 0.00 4.06
2445 4473 2.723342 AGGGGGAGAAGAATATGGCAT 58.277 47.619 4.88 4.88 0.00 4.40
2446 4474 2.212752 AGGGGGAGAAGAATATGGCA 57.787 50.000 0.00 0.00 0.00 4.92
2447 4475 2.443255 TGAAGGGGGAGAAGAATATGGC 59.557 50.000 0.00 0.00 0.00 4.40
2448 4476 3.718956 AGTGAAGGGGGAGAAGAATATGG 59.281 47.826 0.00 0.00 0.00 2.74
2449 4477 4.445448 CCAGTGAAGGGGGAGAAGAATATG 60.445 50.000 0.00 0.00 0.00 1.78
2450 4478 3.718956 CCAGTGAAGGGGGAGAAGAATAT 59.281 47.826 0.00 0.00 0.00 1.28
2451 4479 3.115390 CCAGTGAAGGGGGAGAAGAATA 58.885 50.000 0.00 0.00 0.00 1.75
2452 4480 1.918957 CCAGTGAAGGGGGAGAAGAAT 59.081 52.381 0.00 0.00 0.00 2.40
2453 4481 1.132527 TCCAGTGAAGGGGGAGAAGAA 60.133 52.381 0.00 0.00 0.00 2.52
2454 4482 0.491823 TCCAGTGAAGGGGGAGAAGA 59.508 55.000 0.00 0.00 0.00 2.87
2455 4483 1.488393 GATCCAGTGAAGGGGGAGAAG 59.512 57.143 0.00 0.00 33.47 2.85
2456 4484 1.584724 GATCCAGTGAAGGGGGAGAA 58.415 55.000 0.00 0.00 33.47 2.87
2457 4485 0.326618 GGATCCAGTGAAGGGGGAGA 60.327 60.000 6.95 0.00 33.47 3.71
2458 4486 2.225792 GGATCCAGTGAAGGGGGAG 58.774 63.158 6.95 0.00 33.47 4.30
2459 4487 4.500125 GGATCCAGTGAAGGGGGA 57.500 61.111 6.95 0.00 34.70 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.