Multiple sequence alignment - TraesCS4A01G382800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G382800 chr4A 100.000 2717 0 0 1 2717 660876118 660878834 0.000000e+00 5018.0
1 TraesCS4A01G382800 chr4A 83.784 111 13 2 38 146 571298316 571298423 1.720000e-17 100.0
2 TraesCS4A01G382800 chr7A 87.922 1598 104 47 241 1783 49056375 49057938 0.000000e+00 1799.0
3 TraesCS4A01G382800 chr7A 88.000 125 7 3 1785 1903 49057981 49058103 1.010000e-29 141.0
4 TraesCS4A01G382800 chr7A 78.676 136 21 6 2217 2348 32955201 32955332 1.730000e-12 84.2
5 TraesCS4A01G382800 chr7D 93.412 1017 43 5 776 1783 46853881 46852880 0.000000e+00 1485.0
6 TraesCS4A01G382800 chr7D 84.448 688 74 15 1785 2457 46852831 46852162 0.000000e+00 647.0
7 TraesCS4A01G382800 chr7D 86.331 556 35 14 237 774 46856233 46855701 3.930000e-158 568.0
8 TraesCS4A01G382800 chr7D 93.636 110 7 0 1588 1697 46903825 46903934 6.020000e-37 165.0
9 TraesCS4A01G382800 chr7D 97.015 67 2 0 2651 2717 210384310 210384376 2.210000e-21 113.0
10 TraesCS4A01G382800 chr4D 90.698 258 24 0 2460 2717 414042033 414041776 7.200000e-91 344.0
11 TraesCS4A01G382800 chr4D 90.110 91 6 3 58 147 421122272 421122360 6.150000e-22 115.0
12 TraesCS4A01G382800 chr3B 90.625 256 24 0 2462 2717 488547438 488547693 9.320000e-90 340.0
13 TraesCS4A01G382800 chr3B 87.308 260 31 2 2459 2717 769339575 769339317 2.050000e-76 296.0
14 TraesCS4A01G382800 chr3B 81.121 339 54 9 1984 2315 63429744 63429409 2.070000e-66 263.0
15 TraesCS4A01G382800 chr3B 85.950 121 15 2 2311 2430 63429300 63429181 7.900000e-26 128.0
16 TraesCS4A01G382800 chr3B 79.144 187 25 7 2112 2297 141628150 141627977 1.710000e-22 117.0
17 TraesCS4A01G382800 chr3B 87.500 72 6 3 2311 2381 735589703 735589772 2.240000e-11 80.5
18 TraesCS4A01G382800 chr1B 89.922 258 26 0 2460 2717 35282403 35282146 1.560000e-87 333.0
19 TraesCS4A01G382800 chr1B 88.281 256 30 0 2462 2717 643930006 643929751 9.450000e-80 307.0
20 TraesCS4A01G382800 chr1B 91.398 93 8 0 54 146 403994884 403994792 7.900000e-26 128.0
21 TraesCS4A01G382800 chr1B 100.000 28 0 0 839 866 14313207 14313180 5.000000e-03 52.8
22 TraesCS4A01G382800 chr1B 100.000 28 0 0 839 866 267937141 267937168 5.000000e-03 52.8
23 TraesCS4A01G382800 chr1B 100.000 28 0 0 839 866 280597510 280597537 5.000000e-03 52.8
24 TraesCS4A01G382800 chr1B 100.000 28 0 0 839 866 315541074 315541047 5.000000e-03 52.8
25 TraesCS4A01G382800 chr1B 100.000 28 0 0 839 866 426512740 426512767 5.000000e-03 52.8
26 TraesCS4A01G382800 chr7B 87.692 260 30 1 2460 2717 572961194 572960935 4.400000e-78 302.0
27 TraesCS4A01G382800 chr5D 87.308 260 31 2 2460 2717 526445324 526445583 2.050000e-76 296.0
28 TraesCS4A01G382800 chr5D 88.789 223 23 2 2496 2716 433676110 433675888 3.450000e-69 272.0
29 TraesCS4A01G382800 chr5D 88.235 102 8 4 46 146 210501474 210501376 4.750000e-23 119.0
30 TraesCS4A01G382800 chr2A 85.821 268 28 8 2460 2717 455482980 455482713 2.660000e-70 276.0
31 TraesCS4A01G382800 chr2A 81.212 165 22 8 2148 2305 177986789 177986627 1.020000e-24 124.0
32 TraesCS4A01G382800 chr5B 93.197 147 9 1 1 146 63471291 63471437 5.890000e-52 215.0
33 TraesCS4A01G382800 chr5B 76.250 240 39 10 2112 2348 148642700 148642476 7.950000e-21 111.0
34 TraesCS4A01G382800 chr5B 100.000 28 0 0 839 866 75005750 75005723 5.000000e-03 52.8
35 TraesCS4A01G382800 chr5B 100.000 28 0 0 839 866 133768206 133768233 5.000000e-03 52.8
36 TraesCS4A01G382800 chr6A 90.278 144 14 0 1 144 520510099 520509956 3.570000e-44 189.0
37 TraesCS4A01G382800 chr4B 83.582 201 29 4 2109 2305 508525904 508525704 4.620000e-43 185.0
38 TraesCS4A01G382800 chr4B 87.578 161 15 5 1 157 672445732 672445891 5.980000e-42 182.0
39 TraesCS4A01G382800 chr3A 87.931 116 12 2 2311 2425 51540849 51540735 4.720000e-28 135.0
40 TraesCS4A01G382800 chr3A 82.500 160 23 5 2151 2305 575755619 575755460 4.720000e-28 135.0
41 TraesCS4A01G382800 chr3A 86.139 101 10 4 46 146 200933417 200933513 3.700000e-19 106.0
42 TraesCS4A01G382800 chr1D 88.235 102 8 4 46 146 117191275 117191177 4.750000e-23 119.0
43 TraesCS4A01G382800 chr2D 82.927 82 12 2 2333 2413 625768342 625768262 3.750000e-09 73.1
44 TraesCS4A01G382800 chr2D 82.927 82 12 2 2333 2413 625769980 625769900 3.750000e-09 73.1
45 TraesCS4A01G382800 chr2D 82.927 82 12 2 2333 2413 625771618 625771538 3.750000e-09 73.1
46 TraesCS4A01G382800 chr2D 81.707 82 13 2 2333 2413 625773257 625773177 1.750000e-07 67.6
47 TraesCS4A01G382800 chr2D 81.707 82 13 2 2333 2413 625774895 625774815 1.750000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G382800 chr4A 660876118 660878834 2716 False 5018 5018 100.000000 1 2717 1 chr4A.!!$F2 2716
1 TraesCS4A01G382800 chr7A 49056375 49058103 1728 False 970 1799 87.961000 241 1903 2 chr7A.!!$F2 1662
2 TraesCS4A01G382800 chr7D 46852162 46856233 4071 True 900 1485 88.063667 237 2457 3 chr7D.!!$R1 2220

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
143 144 0.03563 GCAAGGCACTGGATCTCTGT 60.036 55.0 0.0 0.0 40.86 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1723 3611 0.171231 TCTCTTCTGACGGCGATGTG 59.829 55.0 16.62 0.26 0.0 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 3.001406 GGTACCCCGGTCTGCAGT 61.001 66.667 14.67 0.00 0.00 4.40
29 30 2.264794 GTACCCCGGTCTGCAGTG 59.735 66.667 14.67 5.01 0.00 3.66
30 31 2.203728 TACCCCGGTCTGCAGTGT 60.204 61.111 14.67 5.45 0.00 3.55
31 32 2.280552 TACCCCGGTCTGCAGTGTC 61.281 63.158 14.67 5.73 0.00 3.67
32 33 3.625897 CCCCGGTCTGCAGTGTCA 61.626 66.667 14.67 0.00 0.00 3.58
33 34 2.047844 CCCGGTCTGCAGTGTCAG 60.048 66.667 14.67 6.55 35.46 3.51
34 35 2.740055 CCGGTCTGCAGTGTCAGC 60.740 66.667 14.67 2.72 34.19 4.26
35 36 2.341543 CGGTCTGCAGTGTCAGCT 59.658 61.111 14.67 0.00 34.19 4.24
36 37 2.025969 CGGTCTGCAGTGTCAGCTG 61.026 63.158 14.67 7.63 39.37 4.24
42 43 4.451241 CAGTGTCAGCTGCAGTGT 57.549 55.556 25.40 0.00 33.80 3.55
43 44 2.699073 CAGTGTCAGCTGCAGTGTT 58.301 52.632 25.40 0.00 33.80 3.32
44 45 1.019673 CAGTGTCAGCTGCAGTGTTT 58.980 50.000 25.40 0.00 33.80 2.83
45 46 1.003116 CAGTGTCAGCTGCAGTGTTTC 60.003 52.381 25.40 10.19 33.80 2.78
46 47 1.016627 GTGTCAGCTGCAGTGTTTCA 58.983 50.000 16.64 6.15 0.00 2.69
47 48 1.016627 TGTCAGCTGCAGTGTTTCAC 58.983 50.000 16.64 7.14 34.10 3.18
48 49 0.041839 GTCAGCTGCAGTGTTTCACG 60.042 55.000 16.64 0.00 39.64 4.35
49 50 1.369689 CAGCTGCAGTGTTTCACGC 60.370 57.895 16.64 0.00 39.64 5.34
50 51 1.524621 AGCTGCAGTGTTTCACGCT 60.525 52.632 16.64 0.00 39.99 5.07
51 52 0.249868 AGCTGCAGTGTTTCACGCTA 60.250 50.000 16.64 4.73 36.71 4.26
52 53 0.110644 GCTGCAGTGTTTCACGCTAC 60.111 55.000 16.64 0.00 36.71 3.58
53 54 1.217001 CTGCAGTGTTTCACGCTACA 58.783 50.000 5.25 3.14 36.71 2.74
54 55 1.800586 CTGCAGTGTTTCACGCTACAT 59.199 47.619 5.25 0.00 36.71 2.29
55 56 1.798223 TGCAGTGTTTCACGCTACATC 59.202 47.619 13.83 0.00 36.71 3.06
56 57 1.798223 GCAGTGTTTCACGCTACATCA 59.202 47.619 0.00 0.00 36.71 3.07
57 58 2.411547 GCAGTGTTTCACGCTACATCAC 60.412 50.000 0.00 0.00 36.71 3.06
58 59 3.059884 CAGTGTTTCACGCTACATCACT 58.940 45.455 0.00 0.00 36.71 3.41
59 60 3.121944 CAGTGTTTCACGCTACATCACTC 59.878 47.826 0.00 0.00 36.71 3.51
60 61 3.057019 GTGTTTCACGCTACATCACTCA 58.943 45.455 0.00 0.00 0.00 3.41
61 62 3.493129 GTGTTTCACGCTACATCACTCAA 59.507 43.478 0.00 0.00 0.00 3.02
62 63 4.152402 GTGTTTCACGCTACATCACTCAAT 59.848 41.667 0.00 0.00 0.00 2.57
63 64 4.388773 TGTTTCACGCTACATCACTCAATC 59.611 41.667 0.00 0.00 0.00 2.67
64 65 4.456280 TTCACGCTACATCACTCAATCT 57.544 40.909 0.00 0.00 0.00 2.40
65 66 3.774066 TCACGCTACATCACTCAATCTG 58.226 45.455 0.00 0.00 0.00 2.90
66 67 3.443681 TCACGCTACATCACTCAATCTGA 59.556 43.478 0.00 0.00 0.00 3.27
74 75 2.203126 CTCAATCTGAGCCGCCCC 60.203 66.667 0.00 0.00 37.72 5.80
75 76 3.764160 CTCAATCTGAGCCGCCCCC 62.764 68.421 0.00 0.00 37.72 5.40
76 77 3.801997 CAATCTGAGCCGCCCCCT 61.802 66.667 0.00 0.00 0.00 4.79
77 78 3.801997 AATCTGAGCCGCCCCCTG 61.802 66.667 0.00 0.00 0.00 4.45
85 86 4.962836 CCGCCCCCTGCATCCATC 62.963 72.222 0.00 0.00 41.33 3.51
87 88 4.962836 GCCCCCTGCATCCATCGG 62.963 72.222 0.00 0.00 40.77 4.18
88 89 4.962836 CCCCCTGCATCCATCGGC 62.963 72.222 0.00 0.00 0.00 5.54
89 90 3.882326 CCCCTGCATCCATCGGCT 61.882 66.667 0.00 0.00 0.00 5.52
90 91 2.593725 CCCTGCATCCATCGGCTG 60.594 66.667 0.00 0.00 0.00 4.85
91 92 3.285215 CCTGCATCCATCGGCTGC 61.285 66.667 1.92 1.92 44.10 5.25
92 93 3.285215 CTGCATCCATCGGCTGCC 61.285 66.667 9.11 9.11 43.31 4.85
93 94 4.881440 TGCATCCATCGGCTGCCC 62.881 66.667 14.12 0.00 43.31 5.36
116 117 2.358247 CCAGTTACGCCGTGCCTT 60.358 61.111 0.00 0.00 0.00 4.35
117 118 2.677003 CCAGTTACGCCGTGCCTTG 61.677 63.158 0.00 0.00 0.00 3.61
118 119 1.959226 CAGTTACGCCGTGCCTTGT 60.959 57.895 0.00 0.00 0.00 3.16
119 120 1.227734 AGTTACGCCGTGCCTTGTT 60.228 52.632 0.00 0.00 0.00 2.83
120 121 1.082366 GTTACGCCGTGCCTTGTTG 60.082 57.895 0.00 0.00 0.00 3.33
121 122 1.524165 TTACGCCGTGCCTTGTTGT 60.524 52.632 0.00 0.00 0.00 3.32
122 123 1.777030 TTACGCCGTGCCTTGTTGTG 61.777 55.000 0.00 0.00 0.00 3.33
123 124 4.326766 CGCCGTGCCTTGTTGTGG 62.327 66.667 0.00 0.00 0.00 4.17
124 125 3.977244 GCCGTGCCTTGTTGTGGG 61.977 66.667 0.00 0.00 0.00 4.61
131 132 3.536164 CTTGTTGTGGGCAAGGCA 58.464 55.556 0.00 0.00 39.53 4.75
132 133 1.067916 CTTGTTGTGGGCAAGGCAC 59.932 57.895 0.00 0.00 39.53 5.01
134 135 1.674764 TTGTTGTGGGCAAGGCACTG 61.675 55.000 0.00 0.00 40.86 3.66
135 136 2.521465 TTGTGGGCAAGGCACTGG 60.521 61.111 0.00 0.00 40.86 4.00
136 137 3.067084 TTGTGGGCAAGGCACTGGA 62.067 57.895 0.00 0.00 40.86 3.86
137 138 2.036256 GTGGGCAAGGCACTGGAT 59.964 61.111 0.00 0.00 40.86 3.41
138 139 2.048603 GTGGGCAAGGCACTGGATC 61.049 63.158 0.00 0.00 40.86 3.36
139 140 2.233566 TGGGCAAGGCACTGGATCT 61.234 57.895 0.00 0.00 40.86 2.75
140 141 1.452833 GGGCAAGGCACTGGATCTC 60.453 63.158 0.00 0.00 40.86 2.75
141 142 1.606531 GGCAAGGCACTGGATCTCT 59.393 57.895 0.00 0.00 40.86 3.10
142 143 0.747283 GGCAAGGCACTGGATCTCTG 60.747 60.000 0.00 0.00 40.86 3.35
143 144 0.035630 GCAAGGCACTGGATCTCTGT 60.036 55.000 0.00 0.00 40.86 3.41
144 145 2.011046 GCAAGGCACTGGATCTCTGTC 61.011 57.143 0.00 0.00 40.86 3.51
145 146 0.908198 AAGGCACTGGATCTCTGTCC 59.092 55.000 0.00 0.00 40.86 4.02
146 147 0.042431 AGGCACTGGATCTCTGTCCT 59.958 55.000 0.00 0.94 37.18 3.85
147 148 0.177604 GGCACTGGATCTCTGTCCTG 59.822 60.000 0.00 0.00 41.48 3.86
148 149 0.461693 GCACTGGATCTCTGTCCTGC 60.462 60.000 0.00 0.00 39.92 4.85
149 150 0.177604 CACTGGATCTCTGTCCTGCC 59.822 60.000 0.00 0.00 39.92 4.85
150 151 0.042431 ACTGGATCTCTGTCCTGCCT 59.958 55.000 0.00 0.00 39.92 4.75
151 152 0.464870 CTGGATCTCTGTCCTGCCTG 59.535 60.000 0.00 0.00 39.12 4.85
152 153 0.979709 TGGATCTCTGTCCTGCCTGG 60.980 60.000 0.00 0.00 39.12 4.45
153 154 0.689080 GGATCTCTGTCCTGCCTGGA 60.689 60.000 0.00 0.00 43.86 3.86
160 161 4.567195 TCCTGCCTGGACATGTCT 57.433 55.556 24.50 0.00 40.56 3.41
161 162 2.290847 TCCTGCCTGGACATGTCTC 58.709 57.895 24.50 15.19 40.56 3.36
162 163 1.222936 CCTGCCTGGACATGTCTCC 59.777 63.158 24.50 11.10 38.35 3.71
163 164 1.153489 CTGCCTGGACATGTCTCCG 60.153 63.158 24.50 12.85 32.22 4.63
164 165 2.512515 GCCTGGACATGTCTCCGC 60.513 66.667 24.50 18.13 32.22 5.54
165 166 2.187946 CCTGGACATGTCTCCGCC 59.812 66.667 24.50 9.60 32.22 6.13
166 167 2.659063 CCTGGACATGTCTCCGCCA 61.659 63.158 24.50 13.73 32.22 5.69
167 168 1.448540 CTGGACATGTCTCCGCCAC 60.449 63.158 24.50 7.38 32.22 5.01
168 169 1.892819 CTGGACATGTCTCCGCCACT 61.893 60.000 24.50 0.00 32.22 4.00
169 170 1.448540 GGACATGTCTCCGCCACTG 60.449 63.158 24.50 0.00 0.00 3.66
170 171 1.591703 GACATGTCTCCGCCACTGA 59.408 57.895 18.83 0.00 0.00 3.41
171 172 0.459237 GACATGTCTCCGCCACTGAG 60.459 60.000 18.83 0.00 0.00 3.35
172 173 1.188219 ACATGTCTCCGCCACTGAGT 61.188 55.000 0.00 0.00 0.00 3.41
173 174 0.817654 CATGTCTCCGCCACTGAGTA 59.182 55.000 0.00 0.00 0.00 2.59
174 175 0.818296 ATGTCTCCGCCACTGAGTAC 59.182 55.000 0.00 0.00 0.00 2.73
175 176 0.538746 TGTCTCCGCCACTGAGTACA 60.539 55.000 0.00 0.00 0.00 2.90
177 178 0.037734 TCTCCGCCACTGAGTACAGA 59.962 55.000 0.00 0.00 46.03 3.41
178 179 0.453793 CTCCGCCACTGAGTACAGAG 59.546 60.000 0.00 0.00 46.03 3.35
179 180 0.037734 TCCGCCACTGAGTACAGAGA 59.962 55.000 0.00 0.00 46.03 3.10
180 181 0.888619 CCGCCACTGAGTACAGAGAA 59.111 55.000 0.00 0.00 46.03 2.87
181 182 1.272490 CCGCCACTGAGTACAGAGAAA 59.728 52.381 0.00 0.00 46.03 2.52
182 183 2.329379 CGCCACTGAGTACAGAGAAAC 58.671 52.381 0.00 0.00 46.03 2.78
183 184 2.288213 CGCCACTGAGTACAGAGAAACA 60.288 50.000 0.00 0.00 46.03 2.83
184 185 3.060602 GCCACTGAGTACAGAGAAACAC 58.939 50.000 0.00 0.00 46.03 3.32
185 186 3.492656 GCCACTGAGTACAGAGAAACACA 60.493 47.826 0.00 0.00 46.03 3.72
186 187 4.693283 CCACTGAGTACAGAGAAACACAA 58.307 43.478 0.00 0.00 46.03 3.33
187 188 4.508124 CCACTGAGTACAGAGAAACACAAC 59.492 45.833 0.00 0.00 46.03 3.32
188 189 5.109210 CACTGAGTACAGAGAAACACAACA 58.891 41.667 0.00 0.00 46.03 3.33
189 190 5.755375 CACTGAGTACAGAGAAACACAACAT 59.245 40.000 0.00 0.00 46.03 2.71
190 191 6.258727 CACTGAGTACAGAGAAACACAACATT 59.741 38.462 0.00 0.00 46.03 2.71
191 192 6.480320 ACTGAGTACAGAGAAACACAACATTC 59.520 38.462 0.00 0.00 46.03 2.67
192 193 6.345298 TGAGTACAGAGAAACACAACATTCA 58.655 36.000 0.00 0.00 0.00 2.57
193 194 6.479990 TGAGTACAGAGAAACACAACATTCAG 59.520 38.462 0.00 0.00 0.00 3.02
194 195 6.349300 AGTACAGAGAAACACAACATTCAGT 58.651 36.000 0.00 0.00 0.00 3.41
195 196 7.497595 AGTACAGAGAAACACAACATTCAGTA 58.502 34.615 0.00 0.00 0.00 2.74
196 197 8.150945 AGTACAGAGAAACACAACATTCAGTAT 58.849 33.333 0.00 0.00 0.00 2.12
197 198 7.426929 ACAGAGAAACACAACATTCAGTATC 57.573 36.000 0.00 0.00 0.00 2.24
198 199 7.220030 ACAGAGAAACACAACATTCAGTATCT 58.780 34.615 0.00 0.00 0.00 1.98
199 200 7.386299 ACAGAGAAACACAACATTCAGTATCTC 59.614 37.037 0.00 0.00 0.00 2.75
200 201 7.601886 CAGAGAAACACAACATTCAGTATCTCT 59.398 37.037 0.00 0.00 0.00 3.10
201 202 7.601886 AGAGAAACACAACATTCAGTATCTCTG 59.398 37.037 0.00 0.00 44.85 3.35
215 216 8.703378 TCAGTATCTCTGATCATCTACAACAT 57.297 34.615 0.00 0.00 46.77 2.71
216 217 9.140874 TCAGTATCTCTGATCATCTACAACATT 57.859 33.333 0.00 0.00 46.77 2.71
217 218 9.409312 CAGTATCTCTGATCATCTACAACATTC 57.591 37.037 0.00 0.00 46.27 2.67
218 219 8.584157 AGTATCTCTGATCATCTACAACATTCC 58.416 37.037 0.00 0.00 0.00 3.01
219 220 7.615039 ATCTCTGATCATCTACAACATTCCT 57.385 36.000 0.00 0.00 0.00 3.36
220 221 7.048629 TCTCTGATCATCTACAACATTCCTC 57.951 40.000 0.00 0.00 0.00 3.71
221 222 6.608808 TCTCTGATCATCTACAACATTCCTCA 59.391 38.462 0.00 0.00 0.00 3.86
222 223 6.814043 TCTGATCATCTACAACATTCCTCAG 58.186 40.000 0.00 0.00 0.00 3.35
223 224 5.922053 TGATCATCTACAACATTCCTCAGG 58.078 41.667 0.00 0.00 0.00 3.86
224 225 4.142609 TCATCTACAACATTCCTCAGGC 57.857 45.455 0.00 0.00 0.00 4.85
225 226 3.118261 TCATCTACAACATTCCTCAGGCC 60.118 47.826 0.00 0.00 0.00 5.19
226 227 2.551270 TCTACAACATTCCTCAGGCCT 58.449 47.619 0.00 0.00 0.00 5.19
227 228 2.501723 TCTACAACATTCCTCAGGCCTC 59.498 50.000 0.00 0.00 0.00 4.70
228 229 1.366319 ACAACATTCCTCAGGCCTCT 58.634 50.000 0.00 0.00 0.00 3.69
229 230 1.004044 ACAACATTCCTCAGGCCTCTG 59.996 52.381 0.00 0.00 42.21 3.35
230 231 1.280133 CAACATTCCTCAGGCCTCTGA 59.720 52.381 0.00 0.00 46.81 3.27
265 266 2.505407 AGATGAATGTTGATCGGTCCCA 59.495 45.455 0.00 0.00 0.00 4.37
313 314 1.219664 GTATATGCGCGCCCCCATA 59.780 57.895 30.77 19.66 0.00 2.74
349 351 1.600636 TGCGAGCACTGAAAAGGGG 60.601 57.895 0.00 0.00 0.00 4.79
350 352 1.600916 GCGAGCACTGAAAAGGGGT 60.601 57.895 0.00 0.00 0.00 4.95
351 353 1.172812 GCGAGCACTGAAAAGGGGTT 61.173 55.000 0.00 0.00 0.00 4.11
352 354 0.875059 CGAGCACTGAAAAGGGGTTC 59.125 55.000 0.00 0.00 0.00 3.62
353 355 1.813862 CGAGCACTGAAAAGGGGTTCA 60.814 52.381 0.00 0.00 36.15 3.18
354 356 1.609072 GAGCACTGAAAAGGGGTTCAC 59.391 52.381 0.00 0.00 33.92 3.18
355 357 1.215423 AGCACTGAAAAGGGGTTCACT 59.785 47.619 0.00 0.00 33.92 3.41
356 358 1.609072 GCACTGAAAAGGGGTTCACTC 59.391 52.381 0.00 0.00 33.92 3.51
357 359 1.873591 CACTGAAAAGGGGTTCACTCG 59.126 52.381 0.00 0.00 33.92 4.18
444 450 2.449464 TGATGGAATTGAGTGCTTGGG 58.551 47.619 0.00 0.00 0.00 4.12
487 500 4.941657 TCACTGCACAGCTTATCTATCAG 58.058 43.478 0.00 0.00 0.00 2.90
521 539 2.815211 CGACGGTGAGGCACATGG 60.815 66.667 0.00 0.00 35.86 3.66
522 540 2.347490 GACGGTGAGGCACATGGT 59.653 61.111 0.00 0.00 35.86 3.55
523 541 1.741770 GACGGTGAGGCACATGGTC 60.742 63.158 0.00 3.47 35.86 4.02
525 543 2.347490 GGTGAGGCACATGGTCGT 59.653 61.111 0.00 0.00 35.86 4.34
526 544 1.741770 GGTGAGGCACATGGTCGTC 60.742 63.158 0.00 0.00 35.86 4.20
528 546 1.016130 GTGAGGCACATGGTCGTCTG 61.016 60.000 0.00 0.00 34.08 3.51
578 600 3.575399 GCTTGGACAGCCACAAAAG 57.425 52.632 0.00 0.00 45.94 2.27
579 601 0.746659 GCTTGGACAGCCACAAAAGT 59.253 50.000 0.00 0.00 45.94 2.66
580 602 1.536709 GCTTGGACAGCCACAAAAGTG 60.537 52.381 0.00 0.00 45.94 3.16
581 603 1.750778 CTTGGACAGCCACAAAAGTGT 59.249 47.619 0.00 0.00 45.94 3.55
582 604 2.719531 TGGACAGCCACAAAAGTGTA 57.280 45.000 0.00 0.00 39.92 2.90
583 605 3.222173 TGGACAGCCACAAAAGTGTAT 57.778 42.857 0.00 0.00 39.92 2.29
584 606 3.146066 TGGACAGCCACAAAAGTGTATC 58.854 45.455 0.00 0.00 39.92 2.24
587 609 4.218417 GGACAGCCACAAAAGTGTATCAAT 59.782 41.667 0.00 0.00 35.72 2.57
593 615 5.460646 CCACAAAAGTGTATCAATGGTGTC 58.539 41.667 0.00 0.00 35.72 3.67
606 628 0.537653 TGGTGTCCCGCGATTTATCA 59.462 50.000 8.23 0.00 0.00 2.15
646 671 2.420642 CATAGCATAGCAGTGCCGATT 58.579 47.619 12.58 0.00 46.19 3.34
648 673 1.871080 AGCATAGCAGTGCCGATTAC 58.129 50.000 12.58 0.73 46.19 1.89
653 678 0.175760 AGCAGTGCCGATTACGATGT 59.824 50.000 12.58 0.00 42.66 3.06
672 697 1.346068 GTGGTAGCCCAGGATGAGATC 59.654 57.143 0.00 0.00 42.94 2.75
761 796 3.373439 GCTTCCTGAATCACACTTGCTAG 59.627 47.826 0.00 0.00 0.00 3.42
763 798 5.724328 CTTCCTGAATCACACTTGCTAGTA 58.276 41.667 0.00 0.00 31.96 1.82
765 800 4.160439 TCCTGAATCACACTTGCTAGTAGG 59.840 45.833 0.00 2.71 31.96 3.18
766 801 4.160439 CCTGAATCACACTTGCTAGTAGGA 59.840 45.833 0.00 2.14 31.96 2.94
767 802 5.330455 TGAATCACACTTGCTAGTAGGAG 57.670 43.478 0.00 0.00 31.96 3.69
770 805 5.838531 ATCACACTTGCTAGTAGGAGTAC 57.161 43.478 0.00 0.00 31.96 2.73
784 2643 2.422832 AGGAGTACTAGTTGCTGCGTAC 59.577 50.000 0.00 6.66 34.06 3.67
788 2647 1.162698 ACTAGTTGCTGCGTACGAGA 58.837 50.000 21.65 3.04 0.00 4.04
837 2698 2.835895 AAACCTTTGCCCGGCGTT 60.836 55.556 6.01 0.00 0.00 4.84
860 2721 2.203998 CCACCTCCACCTCCACCT 60.204 66.667 0.00 0.00 0.00 4.00
861 2722 2.294078 CCACCTCCACCTCCACCTC 61.294 68.421 0.00 0.00 0.00 3.85
864 2725 2.294078 CCTCCACCTCCACCTCCAC 61.294 68.421 0.00 0.00 0.00 4.02
865 2726 2.203938 TCCACCTCCACCTCCACC 60.204 66.667 0.00 0.00 0.00 4.61
968 2844 4.415150 CGCCCCACCTGATGCTGT 62.415 66.667 0.00 0.00 0.00 4.40
971 2847 2.345760 CCCCACCTGATGCTGTTGC 61.346 63.158 0.00 0.00 40.20 4.17
976 2852 1.467734 CACCTGATGCTGTTGCTTCTC 59.532 52.381 0.00 0.00 41.96 2.87
1062 2950 2.124151 GAGCATCCCAATGGCGGT 60.124 61.111 0.00 0.00 33.19 5.68
1268 3156 2.345991 GTACCTGGCCGTGCAGAA 59.654 61.111 0.00 0.00 0.00 3.02
1269 3157 1.078426 GTACCTGGCCGTGCAGAAT 60.078 57.895 0.00 0.00 0.00 2.40
1386 3274 2.185608 GTGGCCTTCTCGGAGCTC 59.814 66.667 4.71 4.71 33.16 4.09
1488 3376 4.814294 CTGGGCTACGTGGCGTCC 62.814 72.222 18.14 14.49 41.54 4.79
1493 3381 3.129502 CTACGTGGCGTCCTCGGA 61.130 66.667 19.25 12.87 43.59 4.55
1718 3606 1.982395 CCAGGTCCCGCTACTGACA 60.982 63.158 0.00 0.00 34.21 3.58
1719 3607 1.330655 CCAGGTCCCGCTACTGACAT 61.331 60.000 0.00 0.00 34.21 3.06
1720 3608 0.103208 CAGGTCCCGCTACTGACATC 59.897 60.000 0.00 0.00 34.21 3.06
1721 3609 0.033011 AGGTCCCGCTACTGACATCT 60.033 55.000 0.00 0.00 33.09 2.90
1722 3610 0.386113 GGTCCCGCTACTGACATCTC 59.614 60.000 0.00 0.00 33.09 2.75
1723 3611 0.386113 GTCCCGCTACTGACATCTCC 59.614 60.000 0.00 0.00 0.00 3.71
1724 3612 0.033503 TCCCGCTACTGACATCTCCA 60.034 55.000 0.00 0.00 0.00 3.86
1725 3613 0.103208 CCCGCTACTGACATCTCCAC 59.897 60.000 0.00 0.00 0.00 4.02
1764 3655 1.901464 GCTAGCTCCTCTCTCCCCG 60.901 68.421 7.70 0.00 0.00 5.73
1773 3673 1.382695 TCTCTCCCCGGTCCAATCC 60.383 63.158 0.00 0.00 0.00 3.01
1783 3683 2.101249 CCGGTCCAATCCAATCCAAATG 59.899 50.000 0.00 0.00 0.00 2.32
1824 3777 8.564574 TGGCTTTGCTTACTAATATATTTTCCG 58.435 33.333 2.68 0.00 0.00 4.30
1846 3799 6.756542 TCCGCATGTATGTACTGCATATATTC 59.243 38.462 5.08 0.00 39.05 1.75
1903 3856 4.979564 GGTGACGTACCTTAAGTTTCAC 57.020 45.455 0.97 6.25 46.51 3.18
1915 3868 5.858581 CCTTAAGTTTCACTAGCAAACATGC 59.141 40.000 16.41 0.00 36.38 4.06
1917 3870 2.558359 AGTTTCACTAGCAAACATGCCC 59.442 45.455 16.41 0.00 36.38 5.36
1920 3873 0.447801 CACTAGCAAACATGCCCGTC 59.552 55.000 0.00 0.00 34.90 4.79
1921 3874 1.019278 ACTAGCAAACATGCCCGTCG 61.019 55.000 0.00 0.00 34.90 5.12
1922 3875 2.309764 CTAGCAAACATGCCCGTCGC 62.310 60.000 0.00 0.00 34.90 5.19
1938 3899 0.305313 TCGCAACGGGAAACTTTTCG 59.695 50.000 0.00 0.00 38.06 3.46
1941 3902 1.601914 GCAACGGGAAACTTTTCGCAT 60.602 47.619 16.33 1.15 46.70 4.73
1945 3906 2.100087 ACGGGAAACTTTTCGCATGTTT 59.900 40.909 16.33 0.00 46.70 2.83
1961 3922 6.427853 TCGCATGTTTCTAGCATAATAAGCAT 59.572 34.615 0.00 0.00 0.00 3.79
1965 3926 8.781196 CATGTTTCTAGCATAATAAGCATGACT 58.219 33.333 9.45 0.00 33.88 3.41
1966 3927 8.370493 TGTTTCTAGCATAATAAGCATGACTC 57.630 34.615 0.00 0.00 0.00 3.36
1975 3936 2.777832 AAGCATGACTCAAGACTCCC 57.222 50.000 0.00 0.00 0.00 4.30
1981 3942 2.619931 TGACTCAAGACTCCCCAATGA 58.380 47.619 0.00 0.00 0.00 2.57
1984 3945 4.043310 TGACTCAAGACTCCCCAATGATTT 59.957 41.667 0.00 0.00 0.00 2.17
1993 3954 6.548622 AGACTCCCCAATGATTTCATGTTATG 59.451 38.462 0.00 0.00 36.56 1.90
2001 3962 9.205719 CCAATGATTTCATGTTATGTGTTTGAA 57.794 29.630 0.00 0.00 36.56 2.69
2008 3969 9.715123 TTTCATGTTATGTGTTTGAATATAGCG 57.285 29.630 0.00 0.00 0.00 4.26
2009 3970 7.351981 TCATGTTATGTGTTTGAATATAGCGC 58.648 34.615 0.00 0.00 0.00 5.92
2010 3971 6.055231 TGTTATGTGTTTGAATATAGCGCC 57.945 37.500 2.29 0.00 0.00 6.53
2011 3972 5.008217 TGTTATGTGTTTGAATATAGCGCCC 59.992 40.000 2.29 0.00 0.00 6.13
2012 3973 2.294074 TGTGTTTGAATATAGCGCCCC 58.706 47.619 2.29 0.00 0.00 5.80
2013 3974 2.294074 GTGTTTGAATATAGCGCCCCA 58.706 47.619 2.29 0.00 0.00 4.96
2014 3975 2.884639 GTGTTTGAATATAGCGCCCCAT 59.115 45.455 2.29 0.00 0.00 4.00
2023 3984 0.747644 TAGCGCCCCATCATGTTGTG 60.748 55.000 2.29 0.00 0.00 3.33
2024 3985 2.491152 CGCCCCATCATGTTGTGC 59.509 61.111 3.19 4.66 0.00 4.57
2028 3989 1.959508 GCCCCATCATGTTGTGCCTTA 60.960 52.381 3.19 0.00 0.00 2.69
2035 3996 2.092429 TCATGTTGTGCCTTATCCTCCC 60.092 50.000 0.00 0.00 0.00 4.30
2041 4002 0.642156 TGCCTTATCCTCCCTCCTGA 59.358 55.000 0.00 0.00 0.00 3.86
2048 4009 0.793617 TCCTCCCTCCTGACTTCCTT 59.206 55.000 0.00 0.00 0.00 3.36
2079 4040 3.805928 AGGTCCACCTGATCGCAA 58.194 55.556 0.00 0.00 46.55 4.85
2089 4050 2.159338 ACCTGATCGCAATGCATTCAAC 60.159 45.455 9.53 1.13 0.00 3.18
2090 4051 2.159352 CCTGATCGCAATGCATTCAACA 60.159 45.455 9.53 5.23 0.00 3.33
2093 4054 2.281140 TCGCAATGCATTCAACATGG 57.719 45.000 9.53 0.00 0.00 3.66
2098 4059 4.684877 GCAATGCATTCAACATGGTCATA 58.315 39.130 9.53 0.00 0.00 2.15
2104 4065 4.036027 GCATTCAACATGGTCATAGGACAG 59.964 45.833 10.08 1.30 46.17 3.51
2106 4067 5.497464 TTCAACATGGTCATAGGACAGAA 57.503 39.130 10.08 1.12 46.17 3.02
2107 4068 5.089970 TCAACATGGTCATAGGACAGAAG 57.910 43.478 10.08 0.00 46.17 2.85
2122 4083 3.876914 GACAGAAGTGACATTGAACCACA 59.123 43.478 0.00 0.00 33.53 4.17
2131 4092 1.135603 CATTGAACCACACCATCGCAG 60.136 52.381 0.00 0.00 0.00 5.18
2138 4099 1.667830 ACACCATCGCAGGTCAACG 60.668 57.895 0.00 0.00 40.77 4.10
2139 4100 1.667830 CACCATCGCAGGTCAACGT 60.668 57.895 0.00 0.00 40.77 3.99
2146 4107 3.416119 TCGCAGGTCAACGTCTAATAG 57.584 47.619 0.00 0.00 0.00 1.73
2147 4108 2.751259 TCGCAGGTCAACGTCTAATAGT 59.249 45.455 0.00 0.00 0.00 2.12
2169 4130 7.812690 AGTTTTAAAACTAATCCCGTTGAGT 57.187 32.000 27.98 3.25 46.75 3.41
2171 4132 8.132995 AGTTTTAAAACTAATCCCGTTGAGTTG 58.867 33.333 27.98 0.00 46.75 3.16
2173 4134 4.360951 AAACTAATCCCGTTGAGTTGGA 57.639 40.909 0.00 0.00 32.57 3.53
2174 4135 3.329929 ACTAATCCCGTTGAGTTGGAC 57.670 47.619 0.00 0.00 0.00 4.02
2181 4142 1.545614 CGTTGAGTTGGACGTGACGG 61.546 60.000 10.66 0.00 34.75 4.79
2195 4156 2.358737 ACGGCTGCCTTTTCCGAG 60.359 61.111 17.92 0.40 45.53 4.63
2211 4172 2.163010 TCCGAGCTCAACCTACGTTTAG 59.837 50.000 15.40 0.00 0.00 1.85
2212 4173 2.094854 CCGAGCTCAACCTACGTTTAGT 60.095 50.000 15.40 0.00 0.00 2.24
2222 4183 4.088634 ACCTACGTTTAGTCCATACACCA 58.911 43.478 0.00 0.00 0.00 4.17
2229 4190 5.163385 CGTTTAGTCCATACACCATCCCTTA 60.163 44.000 0.00 0.00 0.00 2.69
2246 4207 4.600111 TCCCTTATACACCCACTCACTTTT 59.400 41.667 0.00 0.00 0.00 2.27
2255 4216 7.833285 ACACCCACTCACTTTTAAATTGTAT 57.167 32.000 0.00 0.00 0.00 2.29
2432 4395 4.873768 AAAGGCACAAAAATGGAAAACG 57.126 36.364 0.00 0.00 0.00 3.60
2436 4399 2.347200 GCACAAAAATGGAAAACGCGTC 60.347 45.455 14.44 0.00 0.00 5.19
2441 4404 3.363341 AAATGGAAAACGCGTCAACAT 57.637 38.095 14.44 12.40 0.00 2.71
2480 4443 9.894783 CTGATTTAGAGCATTTTCAATAGATGG 57.105 33.333 0.00 0.00 0.00 3.51
2481 4444 9.412460 TGATTTAGAGCATTTTCAATAGATGGT 57.588 29.630 0.00 0.00 34.52 3.55
2482 4445 9.890352 GATTTAGAGCATTTTCAATAGATGGTC 57.110 33.333 6.65 6.65 44.43 4.02
2493 4456 9.651913 TTTTCAATAGATGGTCTAAATTTTGCC 57.348 29.630 0.00 1.33 31.96 4.52
2494 4457 7.953005 TCAATAGATGGTCTAAATTTTGCCA 57.047 32.000 14.34 14.34 31.96 4.92
2495 4458 7.999679 TCAATAGATGGTCTAAATTTTGCCAG 58.000 34.615 16.09 1.88 31.96 4.85
2496 4459 7.615365 TCAATAGATGGTCTAAATTTTGCCAGT 59.385 33.333 16.09 10.93 31.96 4.00
2497 4460 5.904362 AGATGGTCTAAATTTTGCCAGTC 57.096 39.130 16.09 13.70 32.28 3.51
2498 4461 4.706962 AGATGGTCTAAATTTTGCCAGTCC 59.293 41.667 16.09 7.91 32.28 3.85
2499 4462 3.838565 TGGTCTAAATTTTGCCAGTCCA 58.161 40.909 0.00 0.00 0.00 4.02
2500 4463 4.219115 TGGTCTAAATTTTGCCAGTCCAA 58.781 39.130 0.00 0.00 0.00 3.53
2501 4464 4.651503 TGGTCTAAATTTTGCCAGTCCAAA 59.348 37.500 0.00 0.00 33.21 3.28
2502 4465 5.129485 TGGTCTAAATTTTGCCAGTCCAAAA 59.871 36.000 0.00 2.98 45.50 2.44
2503 4466 5.465390 GGTCTAAATTTTGCCAGTCCAAAAC 59.535 40.000 0.00 0.00 44.60 2.43
2504 4467 5.465390 GTCTAAATTTTGCCAGTCCAAAACC 59.535 40.000 0.00 0.00 44.60 3.27
2505 4468 2.524569 ATTTTGCCAGTCCAAAACCG 57.475 45.000 2.59 0.00 44.60 4.44
2506 4469 0.179097 TTTTGCCAGTCCAAAACCGC 60.179 50.000 0.00 0.00 39.14 5.68
2507 4470 1.323271 TTTGCCAGTCCAAAACCGCA 61.323 50.000 0.00 0.00 32.20 5.69
2508 4471 1.733402 TTGCCAGTCCAAAACCGCAG 61.733 55.000 0.00 0.00 35.68 5.18
2509 4472 1.896660 GCCAGTCCAAAACCGCAGA 60.897 57.895 0.00 0.00 0.00 4.26
2510 4473 1.244019 GCCAGTCCAAAACCGCAGAT 61.244 55.000 0.00 0.00 0.00 2.90
2511 4474 0.523072 CCAGTCCAAAACCGCAGATG 59.477 55.000 0.00 0.00 0.00 2.90
2512 4475 1.238439 CAGTCCAAAACCGCAGATGT 58.762 50.000 0.00 0.00 0.00 3.06
2513 4476 2.422597 CAGTCCAAAACCGCAGATGTA 58.577 47.619 0.00 0.00 0.00 2.29
2514 4477 2.811431 CAGTCCAAAACCGCAGATGTAA 59.189 45.455 0.00 0.00 0.00 2.41
2515 4478 3.252215 CAGTCCAAAACCGCAGATGTAAA 59.748 43.478 0.00 0.00 0.00 2.01
2516 4479 3.886505 AGTCCAAAACCGCAGATGTAAAA 59.113 39.130 0.00 0.00 0.00 1.52
2517 4480 4.522789 AGTCCAAAACCGCAGATGTAAAAT 59.477 37.500 0.00 0.00 0.00 1.82
2518 4481 5.010617 AGTCCAAAACCGCAGATGTAAAATT 59.989 36.000 0.00 0.00 0.00 1.82
2519 4482 5.694458 GTCCAAAACCGCAGATGTAAAATTT 59.306 36.000 0.00 0.00 0.00 1.82
2520 4483 6.864165 GTCCAAAACCGCAGATGTAAAATTTA 59.136 34.615 0.00 0.00 0.00 1.40
2521 4484 7.061789 GTCCAAAACCGCAGATGTAAAATTTAG 59.938 37.037 0.00 0.00 0.00 1.85
2522 4485 7.040340 TCCAAAACCGCAGATGTAAAATTTAGA 60.040 33.333 0.00 0.00 0.00 2.10
2523 4486 7.061789 CCAAAACCGCAGATGTAAAATTTAGAC 59.938 37.037 0.00 0.00 0.00 2.59
2524 4487 5.813080 ACCGCAGATGTAAAATTTAGACC 57.187 39.130 0.00 0.00 0.00 3.85
2525 4488 5.250200 ACCGCAGATGTAAAATTTAGACCA 58.750 37.500 0.00 0.00 0.00 4.02
2526 4489 5.885912 ACCGCAGATGTAAAATTTAGACCAT 59.114 36.000 0.00 0.00 0.00 3.55
2527 4490 6.038271 ACCGCAGATGTAAAATTTAGACCATC 59.962 38.462 6.68 6.68 0.00 3.51
2528 4491 6.038161 CCGCAGATGTAAAATTTAGACCATCA 59.962 38.462 13.63 0.00 32.98 3.07
2529 4492 7.415095 CCGCAGATGTAAAATTTAGACCATCAA 60.415 37.037 13.63 0.00 32.98 2.57
2530 4493 7.967854 CGCAGATGTAAAATTTAGACCATCAAA 59.032 33.333 13.63 0.00 32.98 2.69
2531 4494 9.638239 GCAGATGTAAAATTTAGACCATCAAAA 57.362 29.630 13.63 0.00 32.98 2.44
2550 4513 2.050477 AAATGCGTTTTGAAGCTCCG 57.950 45.000 0.00 0.00 0.00 4.63
2551 4514 1.234821 AATGCGTTTTGAAGCTCCGA 58.765 45.000 0.00 0.00 0.00 4.55
2552 4515 1.234821 ATGCGTTTTGAAGCTCCGAA 58.765 45.000 0.00 0.00 0.00 4.30
2553 4516 1.018148 TGCGTTTTGAAGCTCCGAAA 58.982 45.000 0.00 0.00 0.00 3.46
2554 4517 1.402259 TGCGTTTTGAAGCTCCGAAAA 59.598 42.857 0.00 0.00 0.00 2.29
2555 4518 2.159366 TGCGTTTTGAAGCTCCGAAAAA 60.159 40.909 0.00 0.00 0.00 1.94
2574 4537 5.520376 AAAAAGGTCAACTCCAACAGATG 57.480 39.130 0.00 0.00 0.00 2.90
2587 4550 4.751060 CCAACAGATGGTCCAAATTGATG 58.249 43.478 0.00 0.12 44.85 3.07
2588 4551 4.382254 CCAACAGATGGTCCAAATTGATGG 60.382 45.833 12.44 12.44 44.85 3.51
2589 4552 4.051661 ACAGATGGTCCAAATTGATGGT 57.948 40.909 0.00 0.00 41.46 3.55
2590 4553 4.019174 ACAGATGGTCCAAATTGATGGTC 58.981 43.478 0.00 0.00 41.46 4.02
2591 4554 3.382546 CAGATGGTCCAAATTGATGGTCC 59.617 47.826 0.00 5.71 45.54 4.46
2595 4558 4.615588 GGTCCAAATTGATGGTCCAAAA 57.384 40.909 0.00 0.00 44.93 2.44
2596 4559 4.967036 GGTCCAAATTGATGGTCCAAAAA 58.033 39.130 0.00 0.00 44.93 1.94
2627 4590 6.092955 CCAATAGATGGTCCAAATTCATGG 57.907 41.667 0.00 0.00 44.85 3.66
2628 4591 5.011329 CCAATAGATGGTCCAAATTCATGGG 59.989 44.000 0.00 0.00 44.85 4.00
2629 4592 2.391678 AGATGGTCCAAATTCATGGGC 58.608 47.619 0.00 0.00 44.59 5.36
2634 4597 3.415457 GTCCAAATTCATGGGCCAAAA 57.585 42.857 11.89 8.96 39.24 2.44
2635 4598 3.073678 GTCCAAATTCATGGGCCAAAAC 58.926 45.455 11.89 0.00 39.24 2.43
2636 4599 2.039613 TCCAAATTCATGGGCCAAAACC 59.960 45.455 11.89 0.00 41.05 3.27
2637 4600 2.075338 CAAATTCATGGGCCAAAACCG 58.925 47.619 11.89 0.00 0.00 4.44
2638 4601 0.612744 AATTCATGGGCCAAAACCGG 59.387 50.000 11.89 0.00 0.00 5.28
2639 4602 0.544120 ATTCATGGGCCAAAACCGGT 60.544 50.000 11.89 0.00 0.00 5.28
2640 4603 1.182385 TTCATGGGCCAAAACCGGTC 61.182 55.000 11.89 0.00 0.00 4.79
2641 4604 1.905843 CATGGGCCAAAACCGGTCA 60.906 57.895 11.89 0.00 29.64 4.02
2642 4605 1.078347 ATGGGCCAAAACCGGTCAT 59.922 52.632 11.89 1.43 29.64 3.06
2643 4606 0.970427 ATGGGCCAAAACCGGTCATC 60.970 55.000 11.89 0.00 29.64 2.92
2644 4607 1.605165 GGGCCAAAACCGGTCATCA 60.605 57.895 8.04 0.00 29.64 3.07
2645 4608 1.595093 GGGCCAAAACCGGTCATCAG 61.595 60.000 8.04 0.00 29.64 2.90
2646 4609 1.212751 GCCAAAACCGGTCATCAGC 59.787 57.895 8.04 3.92 0.00 4.26
2647 4610 1.883021 CCAAAACCGGTCATCAGCC 59.117 57.895 8.04 0.00 0.00 4.85
2655 4618 4.467084 GTCATCAGCCGCGGGGAA 62.467 66.667 29.38 6.93 34.06 3.97
2656 4619 3.479203 TCATCAGCCGCGGGGAAT 61.479 61.111 29.38 9.15 34.06 3.01
2657 4620 2.516930 CATCAGCCGCGGGGAATT 60.517 61.111 29.38 3.53 34.06 2.17
2658 4621 2.203209 ATCAGCCGCGGGGAATTC 60.203 61.111 29.38 8.93 34.06 2.17
2659 4622 3.774599 ATCAGCCGCGGGGAATTCC 62.775 63.158 29.38 16.74 34.06 3.01
2666 4629 3.790177 CGGGGAATTCCGTCGAAC 58.210 61.111 25.29 9.66 44.60 3.95
2667 4630 1.079681 CGGGGAATTCCGTCGAACA 60.080 57.895 25.29 0.00 44.60 3.18
2668 4631 1.356527 CGGGGAATTCCGTCGAACAC 61.357 60.000 25.29 8.39 44.60 3.32
2669 4632 1.022982 GGGGAATTCCGTCGAACACC 61.023 60.000 18.30 7.35 36.71 4.16
2670 4633 0.036671 GGGAATTCCGTCGAACACCT 60.037 55.000 18.30 0.00 36.71 4.00
2671 4634 1.609841 GGGAATTCCGTCGAACACCTT 60.610 52.381 18.30 0.00 36.71 3.50
2672 4635 1.463444 GGAATTCCGTCGAACACCTTG 59.537 52.381 9.17 0.00 0.00 3.61
2673 4636 2.140717 GAATTCCGTCGAACACCTTGT 58.859 47.619 0.00 0.00 0.00 3.16
2674 4637 1.508632 ATTCCGTCGAACACCTTGTG 58.491 50.000 0.00 0.00 39.75 3.33
2675 4638 1.155424 TTCCGTCGAACACCTTGTGC 61.155 55.000 0.00 0.00 36.98 4.57
2679 4642 2.052237 CGAACACCTTGTGCGTGC 60.052 61.111 0.00 0.00 44.13 5.34
2680 4643 2.052237 GAACACCTTGTGCGTGCG 60.052 61.111 0.00 0.00 36.98 5.34
2681 4644 3.521308 GAACACCTTGTGCGTGCGG 62.521 63.158 0.00 0.00 36.98 5.69
2682 4645 4.849310 ACACCTTGTGCGTGCGGT 62.849 61.111 0.00 0.00 36.98 5.68
2683 4646 4.312231 CACCTTGTGCGTGCGGTG 62.312 66.667 2.91 2.91 40.71 4.94
2686 4649 3.276091 CTTGTGCGTGCGGTGGAA 61.276 61.111 0.00 0.00 0.00 3.53
2687 4650 3.240606 CTTGTGCGTGCGGTGGAAG 62.241 63.158 0.00 0.00 0.00 3.46
2688 4651 3.741830 TTGTGCGTGCGGTGGAAGA 62.742 57.895 0.00 0.00 0.00 2.87
2689 4652 2.970324 GTGCGTGCGGTGGAAGAA 60.970 61.111 0.00 0.00 0.00 2.52
2690 4653 2.664851 TGCGTGCGGTGGAAGAAG 60.665 61.111 0.00 0.00 0.00 2.85
2691 4654 2.357034 GCGTGCGGTGGAAGAAGA 60.357 61.111 0.00 0.00 0.00 2.87
2692 4655 1.741770 GCGTGCGGTGGAAGAAGAT 60.742 57.895 0.00 0.00 0.00 2.40
2693 4656 1.970917 GCGTGCGGTGGAAGAAGATG 61.971 60.000 0.00 0.00 0.00 2.90
2694 4657 1.361668 CGTGCGGTGGAAGAAGATGG 61.362 60.000 0.00 0.00 0.00 3.51
2695 4658 1.377202 TGCGGTGGAAGAAGATGGC 60.377 57.895 0.00 0.00 0.00 4.40
2696 4659 2.115291 GCGGTGGAAGAAGATGGCC 61.115 63.158 0.00 0.00 0.00 5.36
2697 4660 1.815421 CGGTGGAAGAAGATGGCCG 60.815 63.158 0.00 0.00 0.00 6.13
2698 4661 2.115291 GGTGGAAGAAGATGGCCGC 61.115 63.158 0.00 0.00 0.00 6.53
2699 4662 2.115291 GTGGAAGAAGATGGCCGCC 61.115 63.158 1.04 1.04 0.00 6.13
2700 4663 2.272146 GGAAGAAGATGGCCGCCA 59.728 61.111 16.17 16.17 38.19 5.69
2701 4664 1.821332 GGAAGAAGATGGCCGCCAG 60.821 63.158 18.96 0.00 36.75 4.85
2702 4665 1.078143 GAAGAAGATGGCCGCCAGT 60.078 57.895 18.96 4.62 36.75 4.00
2703 4666 0.678048 GAAGAAGATGGCCGCCAGTT 60.678 55.000 18.96 13.57 36.75 3.16
2704 4667 0.962356 AAGAAGATGGCCGCCAGTTG 60.962 55.000 18.96 0.00 36.75 3.16
2705 4668 2.361610 AAGATGGCCGCCAGTTGG 60.362 61.111 18.96 0.00 36.75 3.77
2706 4669 2.819984 GAAGATGGCCGCCAGTTGGA 62.820 60.000 18.96 0.00 36.75 3.53
2707 4670 2.124151 GATGGCCGCCAGTTGGAT 60.124 61.111 18.96 0.00 36.75 3.41
2708 4671 1.754234 GATGGCCGCCAGTTGGATT 60.754 57.895 18.96 0.00 36.75 3.01
2709 4672 2.008268 GATGGCCGCCAGTTGGATTG 62.008 60.000 18.96 0.00 36.75 2.67
2710 4673 3.451894 GGCCGCCAGTTGGATTGG 61.452 66.667 3.91 1.47 37.39 3.16
2711 4674 2.676471 GCCGCCAGTTGGATTGGT 60.676 61.111 1.45 0.00 38.02 3.67
2712 4675 2.275380 GCCGCCAGTTGGATTGGTT 61.275 57.895 1.45 0.00 38.02 3.67
2713 4676 1.586028 CCGCCAGTTGGATTGGTTG 59.414 57.895 1.45 0.00 38.02 3.77
2714 4677 1.080569 CGCCAGTTGGATTGGTTGC 60.081 57.895 1.45 0.00 38.02 4.17
2715 4678 1.526575 CGCCAGTTGGATTGGTTGCT 61.527 55.000 1.45 0.00 38.02 3.91
2716 4679 0.037975 GCCAGTTGGATTGGTTGCTG 60.038 55.000 1.45 0.00 38.02 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.264794 CACTGCAGACCGGGGTAC 59.735 66.667 23.35 0.00 0.00 3.34
13 14 2.203728 ACACTGCAGACCGGGGTA 60.204 61.111 23.35 0.00 33.69 3.69
14 15 3.626924 GACACTGCAGACCGGGGT 61.627 66.667 23.35 8.09 39.82 4.95
15 16 3.596066 CTGACACTGCAGACCGGGG 62.596 68.421 23.35 4.80 38.14 5.73
16 17 2.047844 CTGACACTGCAGACCGGG 60.048 66.667 23.35 6.63 38.14 5.73
17 18 2.740055 GCTGACACTGCAGACCGG 60.740 66.667 23.35 14.11 38.14 5.28
18 19 2.025969 CAGCTGACACTGCAGACCG 61.026 63.158 23.35 10.83 38.14 4.79
19 20 3.963222 CAGCTGACACTGCAGACC 58.037 61.111 23.35 9.19 38.14 3.85
25 26 1.003116 GAAACACTGCAGCTGACACTG 60.003 52.381 20.43 15.24 40.80 3.66
26 27 1.303309 GAAACACTGCAGCTGACACT 58.697 50.000 20.43 1.25 0.00 3.55
27 28 1.016627 TGAAACACTGCAGCTGACAC 58.983 50.000 20.43 0.00 0.00 3.67
28 29 1.016627 GTGAAACACTGCAGCTGACA 58.983 50.000 20.43 14.08 36.32 3.58
29 30 0.041839 CGTGAAACACTGCAGCTGAC 60.042 55.000 20.43 9.67 35.74 3.51
30 31 1.775039 GCGTGAAACACTGCAGCTGA 61.775 55.000 20.43 1.36 35.74 4.26
31 32 1.369689 GCGTGAAACACTGCAGCTG 60.370 57.895 15.27 10.11 35.74 4.24
32 33 0.249868 TAGCGTGAAACACTGCAGCT 60.250 50.000 15.27 4.97 36.76 4.24
33 34 0.110644 GTAGCGTGAAACACTGCAGC 60.111 55.000 15.27 0.00 36.76 5.25
34 35 1.217001 TGTAGCGTGAAACACTGCAG 58.783 50.000 13.48 13.48 36.69 4.41
35 36 1.798223 GATGTAGCGTGAAACACTGCA 59.202 47.619 15.87 0.00 45.24 4.41
36 37 1.798223 TGATGTAGCGTGAAACACTGC 59.202 47.619 0.00 0.00 35.74 4.40
37 38 3.059884 AGTGATGTAGCGTGAAACACTG 58.940 45.455 0.00 0.00 36.11 3.66
38 39 3.243737 TGAGTGATGTAGCGTGAAACACT 60.244 43.478 0.00 0.00 39.32 3.55
39 40 3.057019 TGAGTGATGTAGCGTGAAACAC 58.943 45.455 0.00 0.00 35.74 3.32
40 41 3.378911 TGAGTGATGTAGCGTGAAACA 57.621 42.857 0.00 0.00 35.74 2.83
41 42 4.627467 AGATTGAGTGATGTAGCGTGAAAC 59.373 41.667 0.00 0.00 0.00 2.78
42 43 4.627035 CAGATTGAGTGATGTAGCGTGAAA 59.373 41.667 0.00 0.00 0.00 2.69
43 44 4.082245 TCAGATTGAGTGATGTAGCGTGAA 60.082 41.667 0.00 0.00 0.00 3.18
44 45 3.443681 TCAGATTGAGTGATGTAGCGTGA 59.556 43.478 0.00 0.00 0.00 4.35
45 46 3.774066 TCAGATTGAGTGATGTAGCGTG 58.226 45.455 0.00 0.00 0.00 5.34
46 47 3.736433 GCTCAGATTGAGTGATGTAGCGT 60.736 47.826 7.80 0.00 45.94 5.07
47 48 2.793790 GCTCAGATTGAGTGATGTAGCG 59.206 50.000 7.80 0.00 45.94 4.26
48 49 3.129871 GGCTCAGATTGAGTGATGTAGC 58.870 50.000 7.80 0.00 45.94 3.58
49 50 3.379240 CGGCTCAGATTGAGTGATGTAG 58.621 50.000 7.80 0.00 45.94 2.74
50 51 2.481969 GCGGCTCAGATTGAGTGATGTA 60.482 50.000 7.80 0.00 45.94 2.29
51 52 1.741732 GCGGCTCAGATTGAGTGATGT 60.742 52.381 7.80 0.00 45.94 3.06
52 53 0.935898 GCGGCTCAGATTGAGTGATG 59.064 55.000 7.80 0.00 45.94 3.07
53 54 0.179062 GGCGGCTCAGATTGAGTGAT 60.179 55.000 0.00 0.00 45.94 3.06
54 55 1.219124 GGCGGCTCAGATTGAGTGA 59.781 57.895 0.00 0.00 45.94 3.41
55 56 1.817099 GGGCGGCTCAGATTGAGTG 60.817 63.158 9.56 2.85 45.94 3.51
56 57 2.586792 GGGCGGCTCAGATTGAGT 59.413 61.111 9.56 0.00 45.94 3.41
57 58 2.203126 GGGGCGGCTCAGATTGAG 60.203 66.667 9.56 1.75 46.90 3.02
58 59 3.797353 GGGGGCGGCTCAGATTGA 61.797 66.667 12.43 0.00 0.00 2.57
59 60 3.801997 AGGGGGCGGCTCAGATTG 61.802 66.667 12.43 0.00 0.00 2.67
60 61 3.801997 CAGGGGGCGGCTCAGATT 61.802 66.667 12.43 0.00 0.00 2.40
70 71 4.962836 CCGATGGATGCAGGGGGC 62.963 72.222 0.00 0.00 45.13 5.80
71 72 4.962836 GCCGATGGATGCAGGGGG 62.963 72.222 8.80 3.42 0.00 5.40
72 73 3.882326 AGCCGATGGATGCAGGGG 61.882 66.667 8.80 5.73 0.00 4.79
73 74 2.593725 CAGCCGATGGATGCAGGG 60.594 66.667 3.08 3.08 30.51 4.45
99 100 2.358247 AAGGCACGGCGTAACTGG 60.358 61.111 14.22 0.00 0.00 4.00
100 101 1.503818 AACAAGGCACGGCGTAACTG 61.504 55.000 14.22 10.53 0.00 3.16
101 102 1.227734 AACAAGGCACGGCGTAACT 60.228 52.632 14.22 11.36 0.00 2.24
102 103 1.082366 CAACAAGGCACGGCGTAAC 60.082 57.895 14.22 8.83 0.00 2.50
103 104 1.524165 ACAACAAGGCACGGCGTAA 60.524 52.632 14.22 0.00 0.00 3.18
104 105 2.109387 ACAACAAGGCACGGCGTA 59.891 55.556 14.22 0.00 0.00 4.42
105 106 3.582120 CACAACAAGGCACGGCGT 61.582 61.111 6.77 6.77 0.00 5.68
106 107 4.326766 CCACAACAAGGCACGGCG 62.327 66.667 4.80 4.80 0.00 6.46
107 108 3.977244 CCCACAACAAGGCACGGC 61.977 66.667 0.00 0.00 0.00 5.68
114 115 1.067916 GTGCCTTGCCCACAACAAG 59.932 57.895 0.00 0.00 43.36 3.16
115 116 1.381056 AGTGCCTTGCCCACAACAA 60.381 52.632 0.00 0.00 35.69 2.83
116 117 2.126596 CAGTGCCTTGCCCACAACA 61.127 57.895 0.00 0.00 35.69 3.33
117 118 2.730094 CAGTGCCTTGCCCACAAC 59.270 61.111 0.00 0.00 35.69 3.32
118 119 2.370459 ATCCAGTGCCTTGCCCACAA 62.370 55.000 0.00 0.00 35.69 3.33
119 120 2.769652 GATCCAGTGCCTTGCCCACA 62.770 60.000 0.00 0.00 35.69 4.17
120 121 2.036256 ATCCAGTGCCTTGCCCAC 59.964 61.111 0.00 0.00 0.00 4.61
121 122 2.202236 GAGATCCAGTGCCTTGCCCA 62.202 60.000 0.00 0.00 0.00 5.36
122 123 1.452833 GAGATCCAGTGCCTTGCCC 60.453 63.158 0.00 0.00 0.00 5.36
123 124 0.747283 CAGAGATCCAGTGCCTTGCC 60.747 60.000 0.00 0.00 0.00 4.52
124 125 0.035630 ACAGAGATCCAGTGCCTTGC 60.036 55.000 0.00 0.00 0.00 4.01
125 126 1.406614 GGACAGAGATCCAGTGCCTTG 60.407 57.143 0.00 0.00 38.77 3.61
126 127 0.908198 GGACAGAGATCCAGTGCCTT 59.092 55.000 0.00 0.00 38.77 4.35
127 128 0.042431 AGGACAGAGATCCAGTGCCT 59.958 55.000 0.00 0.00 41.73 4.75
128 129 0.177604 CAGGACAGAGATCCAGTGCC 59.822 60.000 0.00 0.00 41.73 5.01
129 130 0.461693 GCAGGACAGAGATCCAGTGC 60.462 60.000 0.00 0.00 41.73 4.40
130 131 0.177604 GGCAGGACAGAGATCCAGTG 59.822 60.000 0.00 0.00 41.73 3.66
131 132 0.042431 AGGCAGGACAGAGATCCAGT 59.958 55.000 0.00 0.00 41.73 4.00
132 133 0.464870 CAGGCAGGACAGAGATCCAG 59.535 60.000 0.00 0.00 41.73 3.86
133 134 0.979709 CCAGGCAGGACAGAGATCCA 60.980 60.000 0.00 0.00 41.73 3.41
134 135 0.689080 TCCAGGCAGGACAGAGATCC 60.689 60.000 0.00 0.00 43.07 3.36
135 136 2.907703 TCCAGGCAGGACAGAGATC 58.092 57.895 0.00 0.00 43.07 2.75
143 144 1.267574 GGAGACATGTCCAGGCAGGA 61.268 60.000 22.21 0.00 46.75 3.86
144 145 1.222936 GGAGACATGTCCAGGCAGG 59.777 63.158 22.21 0.00 36.51 4.85
145 146 1.153489 CGGAGACATGTCCAGGCAG 60.153 63.158 22.21 6.77 36.23 4.85
146 147 2.981302 CGGAGACATGTCCAGGCA 59.019 61.111 22.21 0.00 36.23 4.75
147 148 2.512515 GCGGAGACATGTCCAGGC 60.513 66.667 22.21 17.74 36.23 4.85
148 149 2.187946 GGCGGAGACATGTCCAGG 59.812 66.667 22.21 12.11 36.23 4.45
156 157 2.490136 CTGTACTCAGTGGCGGAGACA 61.490 57.143 7.51 6.67 36.33 3.41
157 158 0.171455 CTGTACTCAGTGGCGGAGAC 59.829 60.000 7.51 3.20 36.97 3.36
158 159 0.037734 TCTGTACTCAGTGGCGGAGA 59.962 55.000 7.51 0.00 41.91 3.71
159 160 0.453793 CTCTGTACTCAGTGGCGGAG 59.546 60.000 5.87 5.87 41.91 4.63
160 161 0.037734 TCTCTGTACTCAGTGGCGGA 59.962 55.000 0.00 0.00 41.91 5.54
161 162 0.888619 TTCTCTGTACTCAGTGGCGG 59.111 55.000 0.00 0.00 41.91 6.13
162 163 2.288213 TGTTTCTCTGTACTCAGTGGCG 60.288 50.000 0.00 0.00 41.91 5.69
163 164 3.060602 GTGTTTCTCTGTACTCAGTGGC 58.939 50.000 0.00 0.00 41.91 5.01
164 165 4.322080 TGTGTTTCTCTGTACTCAGTGG 57.678 45.455 0.00 0.00 41.91 4.00
165 166 5.109210 TGTTGTGTTTCTCTGTACTCAGTG 58.891 41.667 0.00 0.00 41.91 3.66
166 167 5.339008 TGTTGTGTTTCTCTGTACTCAGT 57.661 39.130 0.00 0.00 41.91 3.41
167 168 6.479990 TGAATGTTGTGTTTCTCTGTACTCAG 59.520 38.462 0.00 0.00 42.54 3.35
168 169 6.345298 TGAATGTTGTGTTTCTCTGTACTCA 58.655 36.000 0.00 0.00 0.00 3.41
169 170 6.480320 ACTGAATGTTGTGTTTCTCTGTACTC 59.520 38.462 0.00 0.00 0.00 2.59
170 171 6.349300 ACTGAATGTTGTGTTTCTCTGTACT 58.651 36.000 0.00 0.00 0.00 2.73
171 172 6.604735 ACTGAATGTTGTGTTTCTCTGTAC 57.395 37.500 0.00 0.00 0.00 2.90
172 173 8.367911 AGATACTGAATGTTGTGTTTCTCTGTA 58.632 33.333 0.00 0.00 0.00 2.74
173 174 7.220030 AGATACTGAATGTTGTGTTTCTCTGT 58.780 34.615 0.00 0.00 0.00 3.41
174 175 7.601886 AGAGATACTGAATGTTGTGTTTCTCTG 59.398 37.037 11.86 0.00 42.11 3.35
175 176 7.675062 AGAGATACTGAATGTTGTGTTTCTCT 58.325 34.615 0.00 0.00 40.40 3.10
176 177 7.897575 AGAGATACTGAATGTTGTGTTTCTC 57.102 36.000 0.00 0.00 37.59 2.87
191 192 9.409312 GAATGTTGTAGATGATCAGAGATACTG 57.591 37.037 0.09 0.00 46.97 2.74
192 193 8.584157 GGAATGTTGTAGATGATCAGAGATACT 58.416 37.037 0.09 0.00 0.00 2.12
193 194 8.584157 AGGAATGTTGTAGATGATCAGAGATAC 58.416 37.037 0.09 2.37 0.00 2.24
194 195 8.718158 AGGAATGTTGTAGATGATCAGAGATA 57.282 34.615 0.09 0.00 0.00 1.98
195 196 7.289549 TGAGGAATGTTGTAGATGATCAGAGAT 59.710 37.037 0.09 0.00 0.00 2.75
196 197 6.608808 TGAGGAATGTTGTAGATGATCAGAGA 59.391 38.462 0.09 0.00 0.00 3.10
197 198 6.814043 TGAGGAATGTTGTAGATGATCAGAG 58.186 40.000 0.09 0.00 0.00 3.35
198 199 6.183360 CCTGAGGAATGTTGTAGATGATCAGA 60.183 42.308 0.09 0.00 33.89 3.27
199 200 5.990386 CCTGAGGAATGTTGTAGATGATCAG 59.010 44.000 0.09 0.00 0.00 2.90
200 201 5.685861 GCCTGAGGAATGTTGTAGATGATCA 60.686 44.000 0.65 0.00 0.00 2.92
201 202 4.754114 GCCTGAGGAATGTTGTAGATGATC 59.246 45.833 0.65 0.00 0.00 2.92
202 203 4.445448 GGCCTGAGGAATGTTGTAGATGAT 60.445 45.833 0.65 0.00 0.00 2.45
203 204 3.118261 GGCCTGAGGAATGTTGTAGATGA 60.118 47.826 0.65 0.00 0.00 2.92
204 205 3.118112 AGGCCTGAGGAATGTTGTAGATG 60.118 47.826 3.11 0.00 0.00 2.90
205 206 3.118531 AGGCCTGAGGAATGTTGTAGAT 58.881 45.455 3.11 0.00 0.00 1.98
206 207 2.501723 GAGGCCTGAGGAATGTTGTAGA 59.498 50.000 12.00 0.00 0.00 2.59
207 208 2.503356 AGAGGCCTGAGGAATGTTGTAG 59.497 50.000 12.00 0.00 0.00 2.74
208 209 2.237143 CAGAGGCCTGAGGAATGTTGTA 59.763 50.000 12.00 0.00 43.02 2.41
209 210 1.004044 CAGAGGCCTGAGGAATGTTGT 59.996 52.381 12.00 0.00 43.02 3.32
210 211 1.280133 TCAGAGGCCTGAGGAATGTTG 59.720 52.381 12.00 0.00 44.01 3.33
211 212 1.661463 TCAGAGGCCTGAGGAATGTT 58.339 50.000 12.00 0.00 44.01 2.71
212 213 3.406442 TCAGAGGCCTGAGGAATGT 57.594 52.632 12.00 0.00 44.01 2.71
219 220 2.825223 TCAGAGAATTCAGAGGCCTGA 58.175 47.619 12.00 0.00 46.95 3.86
220 221 3.623906 TTCAGAGAATTCAGAGGCCTG 57.376 47.619 12.00 0.00 41.74 4.85
221 222 4.647564 TTTTCAGAGAATTCAGAGGCCT 57.352 40.909 3.86 3.86 0.00 5.19
271 272 5.426504 TGGATCAGCTTTCATCTTCTTCTC 58.573 41.667 0.00 0.00 0.00 2.87
313 314 5.617751 GCTCGCACTTGTGATTTATCAAACT 60.618 40.000 4.79 0.00 38.75 2.66
349 351 1.228657 GGCTGTTGGGTCGAGTGAAC 61.229 60.000 0.00 0.00 0.00 3.18
350 352 1.070786 GGCTGTTGGGTCGAGTGAA 59.929 57.895 0.00 0.00 0.00 3.18
351 353 1.407656 AAGGCTGTTGGGTCGAGTGA 61.408 55.000 0.00 0.00 0.00 3.41
352 354 0.320374 TAAGGCTGTTGGGTCGAGTG 59.680 55.000 0.00 0.00 0.00 3.51
353 355 0.608640 CTAAGGCTGTTGGGTCGAGT 59.391 55.000 0.00 0.00 0.00 4.18
354 356 0.741221 GCTAAGGCTGTTGGGTCGAG 60.741 60.000 0.00 0.00 35.22 4.04
355 357 1.295423 GCTAAGGCTGTTGGGTCGA 59.705 57.895 0.00 0.00 35.22 4.20
356 358 3.890674 GCTAAGGCTGTTGGGTCG 58.109 61.111 0.00 0.00 35.22 4.79
392 398 4.344679 CACCAGATGCCTCTATCTTTCTCT 59.655 45.833 0.00 0.00 35.28 3.10
444 450 1.202188 GCTGGAACGCTAAAGCCATTC 60.202 52.381 0.00 1.21 37.91 2.67
487 500 0.109735 TCGTCGATGTCAGTCACTGC 60.110 55.000 0.00 0.00 0.00 4.40
501 514 3.626680 ATGTGCCTCACCGTCGTCG 62.627 63.158 0.00 0.00 32.73 5.12
521 539 3.002348 CCAGGTTCAAAACTTCAGACGAC 59.998 47.826 0.00 0.00 0.00 4.34
522 540 3.118555 TCCAGGTTCAAAACTTCAGACGA 60.119 43.478 0.00 0.00 0.00 4.20
523 541 3.202906 TCCAGGTTCAAAACTTCAGACG 58.797 45.455 0.00 0.00 0.00 4.18
525 543 3.214328 GCTCCAGGTTCAAAACTTCAGA 58.786 45.455 0.00 0.00 0.00 3.27
526 544 2.294512 GGCTCCAGGTTCAAAACTTCAG 59.705 50.000 0.00 0.00 0.00 3.02
528 546 1.266989 CGGCTCCAGGTTCAAAACTTC 59.733 52.381 0.00 0.00 0.00 3.01
575 597 3.343617 CGGGACACCATTGATACACTTT 58.656 45.455 0.00 0.00 36.13 2.66
576 598 2.939640 GCGGGACACCATTGATACACTT 60.940 50.000 0.00 0.00 36.13 3.16
577 599 1.406887 GCGGGACACCATTGATACACT 60.407 52.381 0.00 0.00 36.13 3.55
578 600 1.014352 GCGGGACACCATTGATACAC 58.986 55.000 0.00 0.00 36.13 2.90
579 601 0.461163 CGCGGGACACCATTGATACA 60.461 55.000 0.00 0.00 36.13 2.29
580 602 0.179094 TCGCGGGACACCATTGATAC 60.179 55.000 6.13 0.00 36.13 2.24
581 603 0.756294 ATCGCGGGACACCATTGATA 59.244 50.000 6.13 0.00 36.13 2.15
582 604 0.107214 AATCGCGGGACACCATTGAT 60.107 50.000 6.13 0.00 36.13 2.57
583 605 0.322098 AAATCGCGGGACACCATTGA 60.322 50.000 6.13 0.00 36.13 2.57
584 606 1.374560 TAAATCGCGGGACACCATTG 58.625 50.000 6.13 0.00 36.13 2.82
587 609 0.537653 TGATAAATCGCGGGACACCA 59.462 50.000 6.13 0.00 36.13 4.17
593 615 2.577300 CGACAATGATAAATCGCGGG 57.423 50.000 6.13 0.00 0.00 6.13
606 628 0.239347 GTGCTGCTTTCTGCGACAAT 59.761 50.000 0.00 0.00 46.63 2.71
646 671 0.032912 TCCTGGGCTACCACATCGTA 60.033 55.000 0.00 0.00 43.37 3.43
648 673 0.250038 CATCCTGGGCTACCACATCG 60.250 60.000 0.00 0.00 43.37 3.84
653 678 1.221523 AGATCTCATCCTGGGCTACCA 59.778 52.381 0.00 0.00 46.94 3.25
761 796 2.422832 ACGCAGCAACTAGTACTCCTAC 59.577 50.000 0.00 0.00 0.00 3.18
763 798 1.546961 ACGCAGCAACTAGTACTCCT 58.453 50.000 0.00 0.00 0.00 3.69
765 800 2.094894 TCGTACGCAGCAACTAGTACTC 59.905 50.000 11.24 0.00 37.78 2.59
766 801 2.079158 TCGTACGCAGCAACTAGTACT 58.921 47.619 11.24 0.00 37.78 2.73
767 802 2.094894 TCTCGTACGCAGCAACTAGTAC 59.905 50.000 11.24 0.00 36.90 2.73
770 805 1.397343 TCTCTCGTACGCAGCAACTAG 59.603 52.381 11.24 0.00 0.00 2.57
784 2643 2.125912 CCCGTGCAACCTCTCTCG 60.126 66.667 0.00 0.00 0.00 4.04
788 2647 3.322466 CCTCCCCGTGCAACCTCT 61.322 66.667 0.00 0.00 0.00 3.69
837 2698 2.122413 AGGTGGAGGTGGAGCACA 60.122 61.111 0.00 0.00 35.86 4.57
860 2721 0.891373 CTTGCTCTCTTCTCGGTGGA 59.109 55.000 0.00 0.00 0.00 4.02
861 2722 0.605589 ACTTGCTCTCTTCTCGGTGG 59.394 55.000 0.00 0.00 0.00 4.61
864 2725 1.134175 GAGGACTTGCTCTCTTCTCGG 59.866 57.143 0.00 0.00 0.00 4.63
865 2726 1.134175 GGAGGACTTGCTCTCTTCTCG 59.866 57.143 0.00 0.00 0.00 4.04
968 2844 3.052082 GCCGCTGCAGAGAAGCAA 61.052 61.111 20.43 0.00 45.13 3.91
971 2847 3.184683 GACGCCGCTGCAGAGAAG 61.185 66.667 20.43 13.86 37.32 2.85
1062 2950 2.524640 TGGTGGTAGTGCGGGTGA 60.525 61.111 0.00 0.00 0.00 4.02
1168 3056 3.357079 GGCCAGCACCGTGAACAG 61.357 66.667 1.65 0.00 0.00 3.16
1347 3235 4.659874 GCGTGGGCGTTGACGTTG 62.660 66.667 5.36 0.00 42.22 4.10
1606 3494 0.670546 CAGTACTTGACGGCCACCAG 60.671 60.000 2.24 0.00 0.00 4.00
1671 3559 2.259818 CAGGTGAAGTCGAGCGCT 59.740 61.111 11.27 11.27 0.00 5.92
1718 3606 1.037579 TCTGACGGCGATGTGGAGAT 61.038 55.000 16.62 0.00 0.00 2.75
1719 3607 1.248101 TTCTGACGGCGATGTGGAGA 61.248 55.000 16.62 1.99 0.00 3.71
1720 3608 0.803768 CTTCTGACGGCGATGTGGAG 60.804 60.000 16.62 0.57 0.00 3.86
1721 3609 1.215382 CTTCTGACGGCGATGTGGA 59.785 57.895 16.62 1.07 0.00 4.02
1722 3610 0.803768 CTCTTCTGACGGCGATGTGG 60.804 60.000 16.62 0.00 0.00 4.17
1723 3611 0.171231 TCTCTTCTGACGGCGATGTG 59.829 55.000 16.62 0.26 0.00 3.21
1724 3612 0.888619 TTCTCTTCTGACGGCGATGT 59.111 50.000 16.62 0.00 0.00 3.06
1725 3613 1.133216 TCTTCTCTTCTGACGGCGATG 59.867 52.381 16.62 2.72 0.00 3.84
1764 3655 2.158914 GCCATTTGGATTGGATTGGACC 60.159 50.000 0.00 0.00 36.26 4.46
1773 3673 2.738743 AGGTAGTGGCCATTTGGATTG 58.261 47.619 9.72 0.00 37.39 2.67
1824 3777 7.755582 TCGAATATATGCAGTACATACATGC 57.244 36.000 0.00 0.00 43.99 4.06
1890 3843 6.515035 GCATGTTTGCTAGTGAAACTTAAGGT 60.515 38.462 7.53 0.00 46.14 3.50
1920 3873 1.266124 GCGAAAAGTTTCCCGTTGCG 61.266 55.000 10.64 0.00 36.74 4.85
1921 3874 0.248702 TGCGAAAAGTTTCCCGTTGC 60.249 50.000 10.64 2.32 33.68 4.17
1922 3875 2.050691 CATGCGAAAAGTTTCCCGTTG 58.949 47.619 10.64 6.63 33.68 4.10
1923 3876 1.679153 ACATGCGAAAAGTTTCCCGTT 59.321 42.857 10.64 0.00 33.68 4.44
1924 3877 1.314730 ACATGCGAAAAGTTTCCCGT 58.685 45.000 10.64 0.00 33.68 5.28
1925 3878 2.415697 AACATGCGAAAAGTTTCCCG 57.584 45.000 0.00 6.13 33.68 5.14
1928 3881 5.212194 TGCTAGAAACATGCGAAAAGTTTC 58.788 37.500 14.01 14.01 46.98 2.78
1929 3882 5.181690 TGCTAGAAACATGCGAAAAGTTT 57.818 34.783 0.00 0.00 38.10 2.66
1931 3884 6.494893 TTATGCTAGAAACATGCGAAAAGT 57.505 33.333 0.00 0.00 0.00 2.66
1932 3885 9.162793 CTTATTATGCTAGAAACATGCGAAAAG 57.837 33.333 0.00 0.00 0.00 2.27
1938 3899 7.536622 GTCATGCTTATTATGCTAGAAACATGC 59.463 37.037 0.00 0.00 33.08 4.06
1941 3902 7.986889 TGAGTCATGCTTATTATGCTAGAAACA 59.013 33.333 0.00 0.00 0.00 2.83
1945 3906 7.869937 GTCTTGAGTCATGCTTATTATGCTAGA 59.130 37.037 0.00 0.00 0.00 2.43
1961 3922 2.619931 TCATTGGGGAGTCTTGAGTCA 58.380 47.619 7.63 0.00 0.00 3.41
1965 3926 4.656100 TGAAATCATTGGGGAGTCTTGA 57.344 40.909 0.00 0.00 0.00 3.02
1966 3927 4.708421 ACATGAAATCATTGGGGAGTCTTG 59.292 41.667 0.00 0.00 33.61 3.02
1975 3936 8.760103 TCAAACACATAACATGAAATCATTGG 57.240 30.769 0.00 0.00 33.61 3.16
1984 3945 7.351981 GCGCTATATTCAAACACATAACATGA 58.648 34.615 0.00 0.00 0.00 3.07
1993 3954 2.294074 TGGGGCGCTATATTCAAACAC 58.706 47.619 7.64 0.00 0.00 3.32
2001 3962 2.040278 ACAACATGATGGGGCGCTATAT 59.960 45.455 7.64 0.00 0.00 0.86
2002 3963 1.419762 ACAACATGATGGGGCGCTATA 59.580 47.619 7.64 0.00 0.00 1.31
2003 3964 0.183492 ACAACATGATGGGGCGCTAT 59.817 50.000 7.64 0.00 0.00 2.97
2004 3965 0.747644 CACAACATGATGGGGCGCTA 60.748 55.000 7.64 0.00 0.00 4.26
2005 3966 2.048023 CACAACATGATGGGGCGCT 61.048 57.895 7.64 0.00 0.00 5.92
2006 3967 2.491152 CACAACATGATGGGGCGC 59.509 61.111 7.95 0.00 0.00 6.53
2007 3968 2.491152 GCACAACATGATGGGGCG 59.509 61.111 7.39 0.00 0.00 6.13
2008 3969 2.894919 GGCACAACATGATGGGGC 59.105 61.111 15.94 15.94 42.41 5.80
2009 3970 2.142356 TAAGGCACAACATGATGGGG 57.858 50.000 7.39 0.21 0.00 4.96
2010 3971 2.624838 GGATAAGGCACAACATGATGGG 59.375 50.000 7.95 4.18 0.00 4.00
2011 3972 3.559069 AGGATAAGGCACAACATGATGG 58.441 45.455 7.95 0.00 0.00 3.51
2012 3973 3.567164 GGAGGATAAGGCACAACATGATG 59.433 47.826 0.00 0.00 0.00 3.07
2013 3974 3.435601 GGGAGGATAAGGCACAACATGAT 60.436 47.826 0.00 0.00 0.00 2.45
2014 3975 2.092429 GGGAGGATAAGGCACAACATGA 60.092 50.000 0.00 0.00 0.00 3.07
2023 3984 1.052617 GTCAGGAGGGAGGATAAGGC 58.947 60.000 0.00 0.00 0.00 4.35
2024 3985 2.785357 AGTCAGGAGGGAGGATAAGG 57.215 55.000 0.00 0.00 0.00 2.69
2028 3989 1.022903 AGGAAGTCAGGAGGGAGGAT 58.977 55.000 0.00 0.00 0.00 3.24
2035 3996 2.355513 CCATGGTCAAGGAAGTCAGGAG 60.356 54.545 2.57 0.00 0.00 3.69
2041 4002 1.002087 GACGACCATGGTCAAGGAAGT 59.998 52.381 37.42 27.42 44.77 3.01
2048 4009 1.972198 GACCTGACGACCATGGTCA 59.028 57.895 37.42 22.15 45.87 4.02
2075 4036 1.921887 GACCATGTTGAATGCATTGCG 59.078 47.619 18.59 0.00 0.00 4.85
2079 4040 4.581824 GTCCTATGACCATGTTGAATGCAT 59.418 41.667 0.00 0.00 35.34 3.96
2089 4050 4.081476 TGTCACTTCTGTCCTATGACCATG 60.081 45.833 0.00 0.00 41.01 3.66
2090 4051 4.096681 TGTCACTTCTGTCCTATGACCAT 58.903 43.478 0.00 0.00 41.01 3.55
2093 4054 5.724328 TCAATGTCACTTCTGTCCTATGAC 58.276 41.667 0.00 0.00 42.12 3.06
2098 4059 3.136443 TGGTTCAATGTCACTTCTGTCCT 59.864 43.478 0.00 0.00 0.00 3.85
2104 4065 2.948979 TGGTGTGGTTCAATGTCACTTC 59.051 45.455 0.00 0.00 33.04 3.01
2106 4067 2.727123 TGGTGTGGTTCAATGTCACT 57.273 45.000 0.00 0.00 33.04 3.41
2107 4068 2.095768 CGATGGTGTGGTTCAATGTCAC 60.096 50.000 0.00 0.00 0.00 3.67
2122 4083 1.374252 GACGTTGACCTGCGATGGT 60.374 57.895 0.00 0.00 44.10 3.55
2146 4107 7.380333 CCAACTCAACGGGATTAGTTTTAAAAC 59.620 37.037 21.06 21.06 39.17 2.43
2147 4108 7.284944 TCCAACTCAACGGGATTAGTTTTAAAA 59.715 33.333 0.00 0.00 29.93 1.52
2161 4122 1.545614 CGTCACGTCCAACTCAACGG 61.546 60.000 0.00 0.00 42.99 4.44
2169 4130 4.980805 GGCAGCCGTCACGTCCAA 62.981 66.667 0.00 0.00 0.00 3.53
2171 4132 4.681978 AAGGCAGCCGTCACGTCC 62.682 66.667 5.55 0.00 0.00 4.79
2173 4134 2.203153 AAAAGGCAGCCGTCACGT 60.203 55.556 5.55 0.00 0.00 4.49
2174 4135 2.556287 GAAAAGGCAGCCGTCACG 59.444 61.111 5.55 0.00 0.00 4.35
2181 4142 1.237285 TTGAGCTCGGAAAAGGCAGC 61.237 55.000 9.64 0.00 0.00 5.25
2195 4156 3.308438 TGGACTAAACGTAGGTTGAGC 57.692 47.619 11.84 5.79 38.06 4.26
2211 4172 5.512576 GGTGTATAAGGGATGGTGTATGGAC 60.513 48.000 0.00 0.00 0.00 4.02
2212 4173 4.595781 GGTGTATAAGGGATGGTGTATGGA 59.404 45.833 0.00 0.00 0.00 3.41
2222 4183 4.008916 AGTGAGTGGGTGTATAAGGGAT 57.991 45.455 0.00 0.00 0.00 3.85
2229 4190 7.833285 ACAATTTAAAAGTGAGTGGGTGTAT 57.167 32.000 8.74 0.00 0.00 2.29
2255 4216 7.753132 GGTTGATGCATTTCGAAAAACACTATA 59.247 33.333 15.66 1.69 0.00 1.31
2274 4235 9.364989 TCTTTGTGTTTTAAAAGAAGGTTGATG 57.635 29.630 0.00 0.00 38.98 3.07
2409 4372 5.262422 CGTTTTCCATTTTTGTGCCTTTTC 58.738 37.500 0.00 0.00 0.00 2.29
2412 4375 2.611751 GCGTTTTCCATTTTTGTGCCTT 59.388 40.909 0.00 0.00 0.00 4.35
2424 4387 2.853731 AAATGTTGACGCGTTTTCCA 57.146 40.000 15.53 8.81 0.00 3.53
2457 4420 9.638176 AGACCATCTATTGAAAATGCTCTAAAT 57.362 29.630 0.00 0.00 0.00 1.40
2461 4424 9.638176 ATTTAGACCATCTATTGAAAATGCTCT 57.362 29.630 0.00 0.00 0.00 4.09
2467 4430 9.651913 GGCAAAATTTAGACCATCTATTGAAAA 57.348 29.630 0.00 0.00 0.00 2.29
2468 4431 8.811017 TGGCAAAATTTAGACCATCTATTGAAA 58.189 29.630 0.00 0.00 0.00 2.69
2469 4432 8.359875 TGGCAAAATTTAGACCATCTATTGAA 57.640 30.769 0.00 0.00 0.00 2.69
2470 4433 7.615365 ACTGGCAAAATTTAGACCATCTATTGA 59.385 33.333 7.08 0.00 0.00 2.57
2471 4434 7.775120 ACTGGCAAAATTTAGACCATCTATTG 58.225 34.615 7.08 0.00 0.00 1.90
2472 4435 7.068716 GGACTGGCAAAATTTAGACCATCTATT 59.931 37.037 7.08 0.00 0.00 1.73
2473 4436 6.547510 GGACTGGCAAAATTTAGACCATCTAT 59.452 38.462 7.08 0.00 0.00 1.98
2474 4437 5.885912 GGACTGGCAAAATTTAGACCATCTA 59.114 40.000 7.08 0.00 0.00 1.98
2475 4438 4.706962 GGACTGGCAAAATTTAGACCATCT 59.293 41.667 7.08 0.00 0.00 2.90
2476 4439 4.462483 TGGACTGGCAAAATTTAGACCATC 59.538 41.667 5.98 6.77 31.76 3.51
2477 4440 4.415596 TGGACTGGCAAAATTTAGACCAT 58.584 39.130 5.98 0.00 31.76 3.55
2478 4441 3.838565 TGGACTGGCAAAATTTAGACCA 58.161 40.909 5.98 5.98 33.72 4.02
2479 4442 4.864704 TTGGACTGGCAAAATTTAGACC 57.135 40.909 0.00 0.00 0.00 3.85
2480 4443 5.465390 GGTTTTGGACTGGCAAAATTTAGAC 59.535 40.000 0.00 0.00 33.61 2.59
2481 4444 5.606505 GGTTTTGGACTGGCAAAATTTAGA 58.393 37.500 0.00 0.00 33.61 2.10
2482 4445 4.447389 CGGTTTTGGACTGGCAAAATTTAG 59.553 41.667 0.00 0.00 33.61 1.85
2483 4446 4.372656 CGGTTTTGGACTGGCAAAATTTA 58.627 39.130 0.00 0.00 33.61 1.40
2484 4447 3.202097 CGGTTTTGGACTGGCAAAATTT 58.798 40.909 0.00 0.00 33.61 1.82
2485 4448 2.832563 CGGTTTTGGACTGGCAAAATT 58.167 42.857 0.00 0.00 33.61 1.82
2486 4449 1.540146 GCGGTTTTGGACTGGCAAAAT 60.540 47.619 0.00 0.00 35.05 1.82
2487 4450 0.179097 GCGGTTTTGGACTGGCAAAA 60.179 50.000 0.00 0.00 35.05 2.44
2488 4451 1.323271 TGCGGTTTTGGACTGGCAAA 61.323 50.000 0.00 0.00 35.69 3.68
2489 4452 1.733402 CTGCGGTTTTGGACTGGCAA 61.733 55.000 0.00 0.00 37.27 4.52
2490 4453 2.124109 TGCGGTTTTGGACTGGCA 60.124 55.556 0.00 0.00 36.05 4.92
2491 4454 1.244019 ATCTGCGGTTTTGGACTGGC 61.244 55.000 0.00 0.00 35.05 4.85
2492 4455 0.523072 CATCTGCGGTTTTGGACTGG 59.477 55.000 0.00 0.00 35.05 4.00
2493 4456 1.238439 ACATCTGCGGTTTTGGACTG 58.762 50.000 0.00 0.00 37.71 3.51
2494 4457 2.851263 TACATCTGCGGTTTTGGACT 57.149 45.000 0.00 0.00 0.00 3.85
2495 4458 3.907894 TTTACATCTGCGGTTTTGGAC 57.092 42.857 0.00 0.00 0.00 4.02
2496 4459 5.461032 AATTTTACATCTGCGGTTTTGGA 57.539 34.783 0.00 0.00 0.00 3.53
2497 4460 7.061789 GTCTAAATTTTACATCTGCGGTTTTGG 59.938 37.037 0.00 0.00 0.00 3.28
2498 4461 7.061789 GGTCTAAATTTTACATCTGCGGTTTTG 59.938 37.037 0.00 0.00 0.00 2.44
2499 4462 7.088272 GGTCTAAATTTTACATCTGCGGTTTT 58.912 34.615 0.00 0.00 0.00 2.43
2500 4463 6.207810 TGGTCTAAATTTTACATCTGCGGTTT 59.792 34.615 0.00 0.00 0.00 3.27
2501 4464 5.708230 TGGTCTAAATTTTACATCTGCGGTT 59.292 36.000 0.00 0.00 0.00 4.44
2502 4465 5.250200 TGGTCTAAATTTTACATCTGCGGT 58.750 37.500 0.00 0.00 0.00 5.68
2503 4466 5.811399 TGGTCTAAATTTTACATCTGCGG 57.189 39.130 0.00 0.00 0.00 5.69
2504 4467 7.015226 TGATGGTCTAAATTTTACATCTGCG 57.985 36.000 17.29 0.00 36.56 5.18
2505 4468 9.638239 TTTTGATGGTCTAAATTTTACATCTGC 57.362 29.630 17.29 0.00 36.56 4.26
2529 4492 2.794350 CGGAGCTTCAAAACGCATTTTT 59.206 40.909 0.00 0.00 35.79 1.94
2530 4493 2.034053 TCGGAGCTTCAAAACGCATTTT 59.966 40.909 0.00 0.00 38.61 1.82
2531 4494 1.606668 TCGGAGCTTCAAAACGCATTT 59.393 42.857 0.00 0.00 0.00 2.32
2532 4495 1.234821 TCGGAGCTTCAAAACGCATT 58.765 45.000 0.00 0.00 0.00 3.56
2533 4496 1.234821 TTCGGAGCTTCAAAACGCAT 58.765 45.000 0.00 0.00 0.00 4.73
2534 4497 1.018148 TTTCGGAGCTTCAAAACGCA 58.982 45.000 0.00 0.00 0.00 5.24
2535 4498 2.113910 TTTTCGGAGCTTCAAAACGC 57.886 45.000 0.00 0.00 0.00 4.84
2552 4515 5.520376 CATCTGTTGGAGTTGACCTTTTT 57.480 39.130 0.00 0.00 0.00 1.94
2564 4527 8.907229 ACCATCAATTTGGACCATCTGTTGGA 62.907 42.308 22.75 7.30 42.98 3.53
2565 4528 6.796646 ACCATCAATTTGGACCATCTGTTGG 61.797 44.000 18.12 18.12 44.65 3.77
2566 4529 4.221262 ACCATCAATTTGGACCATCTGTTG 59.779 41.667 3.10 0.00 39.25 3.33
2567 4530 4.419282 ACCATCAATTTGGACCATCTGTT 58.581 39.130 3.10 0.00 39.25 3.16
2568 4531 4.019174 GACCATCAATTTGGACCATCTGT 58.981 43.478 3.10 0.00 39.25 3.41
2569 4532 3.382546 GGACCATCAATTTGGACCATCTG 59.617 47.826 11.42 0.00 46.78 2.90
2570 4533 3.635591 GGACCATCAATTTGGACCATCT 58.364 45.455 11.42 0.00 46.78 2.90
2602 4565 8.876777 CCCATGAATTTGGACCATCTATTGGAG 61.877 44.444 0.00 0.00 42.98 3.86
2603 4566 7.146424 CCCATGAATTTGGACCATCTATTGGA 61.146 42.308 0.00 0.00 42.98 3.53
2604 4567 5.011329 CCCATGAATTTGGACCATCTATTGG 59.989 44.000 0.00 0.00 41.60 3.16
2605 4568 5.510179 GCCCATGAATTTGGACCATCTATTG 60.510 44.000 0.00 0.00 39.25 1.90
2606 4569 4.590222 GCCCATGAATTTGGACCATCTATT 59.410 41.667 0.00 0.00 39.25 1.73
2607 4570 4.154942 GCCCATGAATTTGGACCATCTAT 58.845 43.478 0.00 0.00 39.25 1.98
2608 4571 3.565307 GCCCATGAATTTGGACCATCTA 58.435 45.455 0.00 0.00 39.25 1.98
2609 4572 2.391678 GCCCATGAATTTGGACCATCT 58.608 47.619 0.00 0.00 39.25 2.90
2610 4573 1.413812 GGCCCATGAATTTGGACCATC 59.586 52.381 0.00 0.00 39.03 3.51
2611 4574 1.273724 TGGCCCATGAATTTGGACCAT 60.274 47.619 0.00 0.00 43.56 3.55
2612 4575 0.115944 TGGCCCATGAATTTGGACCA 59.884 50.000 0.00 0.31 45.91 4.02
2613 4576 1.274712 TTGGCCCATGAATTTGGACC 58.725 50.000 0.00 0.00 39.61 4.46
2614 4577 3.073678 GTTTTGGCCCATGAATTTGGAC 58.926 45.455 0.00 0.00 39.25 4.02
2615 4578 2.039613 GGTTTTGGCCCATGAATTTGGA 59.960 45.455 0.00 0.00 39.25 3.53
2616 4579 2.435422 GGTTTTGGCCCATGAATTTGG 58.565 47.619 0.00 0.00 36.46 3.28
2617 4580 2.075338 CGGTTTTGGCCCATGAATTTG 58.925 47.619 0.00 0.00 0.00 2.32
2618 4581 1.003003 CCGGTTTTGGCCCATGAATTT 59.997 47.619 0.00 0.00 0.00 1.82
2619 4582 0.612744 CCGGTTTTGGCCCATGAATT 59.387 50.000 0.00 0.00 0.00 2.17
2620 4583 0.544120 ACCGGTTTTGGCCCATGAAT 60.544 50.000 0.00 0.00 0.00 2.57
2621 4584 1.152440 ACCGGTTTTGGCCCATGAA 60.152 52.632 0.00 0.00 0.00 2.57
2622 4585 1.605165 GACCGGTTTTGGCCCATGA 60.605 57.895 9.42 0.00 0.00 3.07
2623 4586 1.257055 ATGACCGGTTTTGGCCCATG 61.257 55.000 9.42 0.00 0.00 3.66
2624 4587 0.970427 GATGACCGGTTTTGGCCCAT 60.970 55.000 9.42 5.30 0.00 4.00
2625 4588 1.605165 GATGACCGGTTTTGGCCCA 60.605 57.895 9.42 0.00 0.00 5.36
2626 4589 1.595093 CTGATGACCGGTTTTGGCCC 61.595 60.000 9.42 0.00 0.00 5.80
2627 4590 1.883021 CTGATGACCGGTTTTGGCC 59.117 57.895 9.42 0.00 0.00 5.36
2628 4591 1.212751 GCTGATGACCGGTTTTGGC 59.787 57.895 9.42 6.65 0.00 4.52
2629 4592 1.883021 GGCTGATGACCGGTTTTGG 59.117 57.895 9.42 0.00 0.00 3.28
2638 4601 3.757248 ATTCCCCGCGGCTGATGAC 62.757 63.158 22.85 0.00 0.00 3.06
2639 4602 2.940890 GAATTCCCCGCGGCTGATGA 62.941 60.000 22.85 7.56 0.00 2.92
2640 4603 2.516930 AATTCCCCGCGGCTGATG 60.517 61.111 22.85 5.30 0.00 3.07
2641 4604 2.203209 GAATTCCCCGCGGCTGAT 60.203 61.111 22.85 9.72 0.00 2.90
2642 4605 4.483243 GGAATTCCCCGCGGCTGA 62.483 66.667 22.85 16.09 0.00 4.26
2650 4613 1.022982 GGTGTTCGACGGAATTCCCC 61.023 60.000 19.01 9.89 34.05 4.81
2651 4614 0.036671 AGGTGTTCGACGGAATTCCC 60.037 55.000 19.01 4.80 34.05 3.97
2652 4615 1.463444 CAAGGTGTTCGACGGAATTCC 59.537 52.381 15.01 15.01 34.05 3.01
2653 4616 2.096417 CACAAGGTGTTCGACGGAATTC 60.096 50.000 0.00 0.00 34.05 2.17
2654 4617 1.871039 CACAAGGTGTTCGACGGAATT 59.129 47.619 0.00 0.00 34.05 2.17
2655 4618 1.508632 CACAAGGTGTTCGACGGAAT 58.491 50.000 0.00 0.00 34.05 3.01
2656 4619 1.155424 GCACAAGGTGTTCGACGGAA 61.155 55.000 0.00 0.00 35.75 4.30
2657 4620 1.593209 GCACAAGGTGTTCGACGGA 60.593 57.895 0.00 0.00 35.75 4.69
2658 4621 2.935955 GCACAAGGTGTTCGACGG 59.064 61.111 0.00 0.00 35.75 4.79
2659 4622 2.235016 ACGCACAAGGTGTTCGACG 61.235 57.895 7.40 0.00 39.26 5.12
2660 4623 1.275657 CACGCACAAGGTGTTCGAC 59.724 57.895 7.40 0.00 39.26 4.20
2661 4624 2.530497 GCACGCACAAGGTGTTCGA 61.530 57.895 7.40 0.00 39.26 3.71
2662 4625 2.052237 GCACGCACAAGGTGTTCG 60.052 61.111 0.00 0.00 42.43 3.95
2663 4626 2.052237 CGCACGCACAAGGTGTTC 60.052 61.111 0.00 0.00 38.42 3.18
2664 4627 3.582120 CCGCACGCACAAGGTGTT 61.582 61.111 0.00 0.00 38.42 3.32
2665 4628 4.849310 ACCGCACGCACAAGGTGT 62.849 61.111 0.00 0.00 42.06 4.16
2666 4629 4.312231 CACCGCACGCACAAGGTG 62.312 66.667 4.39 4.39 46.52 4.00
2669 4632 3.240606 CTTCCACCGCACGCACAAG 62.241 63.158 0.00 0.00 0.00 3.16
2670 4633 3.276091 CTTCCACCGCACGCACAA 61.276 61.111 0.00 0.00 0.00 3.33
2671 4634 3.741830 TTCTTCCACCGCACGCACA 62.742 57.895 0.00 0.00 0.00 4.57
2672 4635 2.954753 CTTCTTCCACCGCACGCAC 61.955 63.158 0.00 0.00 0.00 5.34
2673 4636 2.449031 ATCTTCTTCCACCGCACGCA 62.449 55.000 0.00 0.00 0.00 5.24
2674 4637 1.741770 ATCTTCTTCCACCGCACGC 60.742 57.895 0.00 0.00 0.00 5.34
2675 4638 1.361668 CCATCTTCTTCCACCGCACG 61.362 60.000 0.00 0.00 0.00 5.34
2676 4639 1.648467 GCCATCTTCTTCCACCGCAC 61.648 60.000 0.00 0.00 0.00 5.34
2677 4640 1.377202 GCCATCTTCTTCCACCGCA 60.377 57.895 0.00 0.00 0.00 5.69
2678 4641 2.115291 GGCCATCTTCTTCCACCGC 61.115 63.158 0.00 0.00 0.00 5.68
2679 4642 1.815421 CGGCCATCTTCTTCCACCG 60.815 63.158 2.24 0.00 0.00 4.94
2680 4643 2.115291 GCGGCCATCTTCTTCCACC 61.115 63.158 2.24 0.00 0.00 4.61
2681 4644 2.115291 GGCGGCCATCTTCTTCCAC 61.115 63.158 15.62 0.00 0.00 4.02
2682 4645 2.272146 GGCGGCCATCTTCTTCCA 59.728 61.111 15.62 0.00 0.00 3.53
2683 4646 1.821332 CTGGCGGCCATCTTCTTCC 60.821 63.158 24.10 0.00 30.82 3.46
2684 4647 0.678048 AACTGGCGGCCATCTTCTTC 60.678 55.000 24.10 0.00 30.82 2.87
2685 4648 0.962356 CAACTGGCGGCCATCTTCTT 60.962 55.000 24.10 6.21 30.82 2.52
2686 4649 1.377725 CAACTGGCGGCCATCTTCT 60.378 57.895 24.10 2.33 30.82 2.85
2687 4650 2.409870 CCAACTGGCGGCCATCTTC 61.410 63.158 24.10 0.00 30.82 2.87
2688 4651 2.215451 ATCCAACTGGCGGCCATCTT 62.215 55.000 24.10 13.93 30.82 2.40
2689 4652 2.215451 AATCCAACTGGCGGCCATCT 62.215 55.000 24.10 9.80 30.82 2.90
2690 4653 1.754234 AATCCAACTGGCGGCCATC 60.754 57.895 24.10 0.00 30.82 3.51
2691 4654 2.053865 CAATCCAACTGGCGGCCAT 61.054 57.895 24.10 5.58 30.82 4.40
2692 4655 2.676121 CAATCCAACTGGCGGCCA 60.676 61.111 22.39 22.39 34.44 5.36
2693 4656 3.451894 CCAATCCAACTGGCGGCC 61.452 66.667 13.32 13.32 34.44 6.13
2694 4657 2.275380 AACCAATCCAACTGGCGGC 61.275 57.895 0.00 0.00 37.48 6.53
2695 4658 1.586028 CAACCAATCCAACTGGCGG 59.414 57.895 0.00 0.00 37.48 6.13
2696 4659 1.080569 GCAACCAATCCAACTGGCG 60.081 57.895 0.00 0.00 37.48 5.69
2697 4660 0.037975 CAGCAACCAATCCAACTGGC 60.038 55.000 0.00 0.00 37.48 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.