Multiple sequence alignment - TraesCS4A01G352300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G352300 chr4A 100.000 3454 0 0 1 3454 627818137 627821590 0.000000e+00 6379.0
1 TraesCS4A01G352300 chr4A 75.685 839 111 38 2648 3454 627904523 627905300 1.990000e-87 333.0
2 TraesCS4A01G352300 chr4A 86.473 207 25 3 2372 2575 614577233 614577027 1.250000e-54 224.0
3 TraesCS4A01G352300 chr4A 87.324 142 16 2 2414 2555 627904132 627904271 9.920000e-36 161.0
4 TraesCS4A01G352300 chr4A 79.310 203 33 8 2932 3130 614576747 614576550 2.160000e-27 134.0
5 TraesCS4A01G352300 chr4A 97.826 46 1 0 320 365 660784240 660784195 2.860000e-11 80.5
6 TraesCS4A01G352300 chr4A 79.208 101 19 2 3350 3449 602893003 602893102 6.190000e-08 69.4
7 TraesCS4A01G352300 chr5B 86.703 1271 117 25 1549 2802 682183111 682184346 0.000000e+00 1363.0
8 TraesCS4A01G352300 chr5B 81.429 980 152 22 1808 2768 682951324 682952292 0.000000e+00 774.0
9 TraesCS4A01G352300 chr5B 83.369 469 46 19 1098 1547 682182621 682183076 4.150000e-109 405.0
10 TraesCS4A01G352300 chr5B 78.571 490 65 14 2640 3127 682194234 682194685 1.570000e-73 287.0
11 TraesCS4A01G352300 chr5B 76.894 528 62 30 2600 3125 682184143 682184612 9.580000e-61 244.0
12 TraesCS4A01G352300 chr5B 87.629 194 20 2 2372 2561 696704038 696703845 4.490000e-54 222.0
13 TraesCS4A01G352300 chr5B 79.245 318 43 13 3138 3454 682952603 682952898 2.100000e-47 200.0
14 TraesCS4A01G352300 chr5B 91.935 124 10 0 3331 3454 682184834 682184957 1.270000e-39 174.0
15 TraesCS4A01G352300 chr5B 72.948 743 54 46 407 1088 682181915 682182571 4.680000e-24 122.0
16 TraesCS4A01G352300 chr5D 88.179 736 78 6 1736 2466 539973386 539974117 0.000000e+00 869.0
17 TraesCS4A01G352300 chr5D 79.250 747 92 34 2754 3454 539974721 539975450 2.430000e-126 462.0
18 TraesCS4A01G352300 chr5D 94.977 219 11 0 2248 2466 539981585 539981803 9.180000e-91 344.0
19 TraesCS4A01G352300 chr5D 92.105 114 9 0 2448 2561 539981851 539981964 9.920000e-36 161.0
20 TraesCS4A01G352300 chr5D 83.529 170 25 2 2716 2882 539982176 539982345 4.620000e-34 156.0
21 TraesCS4A01G352300 chr5D 94.898 98 5 0 3357 3454 539982757 539982854 1.660000e-33 154.0
22 TraesCS4A01G352300 chr5D 87.500 104 10 1 1186 1289 539972869 539972969 2.180000e-22 117.0
23 TraesCS4A01G352300 chr5D 85.556 90 10 1 1960 2049 539981494 539981580 1.320000e-14 91.6
24 TraesCS4A01G352300 chr3D 86.076 79 6 4 408 483 459877329 459877405 2.860000e-11 80.5
25 TraesCS4A01G352300 chr4B 79.775 89 16 2 3365 3452 3637899 3637812 2.880000e-06 63.9
26 TraesCS4A01G352300 chr4B 79.775 89 16 2 3365 3452 3638589 3638502 2.880000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G352300 chr4A 627818137 627821590 3453 False 6379.000000 6379 100.000000 1 3454 1 chr4A.!!$F2 3453
1 TraesCS4A01G352300 chr4A 627904132 627905300 1168 False 247.000000 333 81.504500 2414 3454 2 chr4A.!!$F3 1040
2 TraesCS4A01G352300 chr5B 682951324 682952898 1574 False 487.000000 774 80.337000 1808 3454 2 chr5B.!!$F3 1646
3 TraesCS4A01G352300 chr5B 682181915 682184957 3042 False 461.600000 1363 82.369800 407 3454 5 chr5B.!!$F2 3047
4 TraesCS4A01G352300 chr5D 539972869 539975450 2581 False 482.666667 869 84.976333 1186 3454 3 chr5D.!!$F1 2268


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
671 718 0.030369 GGGTGATGCGTCTACCTACG 59.970 60.0 20.10 0.00 45.58 3.51 F
709 756 0.321021 AAGAGAGACACCTGCAGCTG 59.679 55.0 10.11 10.11 0.00 4.24 F
1733 1941 0.107703 TCAGCTTAACATCCCAGCCG 60.108 55.0 0.00 0.00 33.73 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 1938 0.383949 TGGCAGAGAAAACAAACGGC 59.616 50.0 0.0 0.0 0.00 5.68 R
1796 2016 0.753867 TGTGCGTTAGGTGAACAGGA 59.246 50.0 0.0 0.0 37.99 3.86 R
3034 3855 0.107456 ATTCTAGCTGTGGGATGGCG 59.893 55.0 0.0 0.0 0.00 5.69 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.538614 CCGGATCCTGACCACGAT 58.461 61.111 10.75 0.00 0.00 3.73
18 19 1.068083 CCGGATCCTGACCACGATG 59.932 63.158 10.75 0.00 0.00 3.84
19 20 1.592669 CGGATCCTGACCACGATGC 60.593 63.158 10.75 0.00 0.00 3.91
20 21 1.592669 GGATCCTGACCACGATGCG 60.593 63.158 3.84 0.00 0.00 4.73
21 22 2.202932 ATCCTGACCACGATGCGC 60.203 61.111 0.00 0.00 0.00 6.09
22 23 2.635229 GATCCTGACCACGATGCGCT 62.635 60.000 9.73 0.00 0.00 5.92
23 24 2.913054 ATCCTGACCACGATGCGCTG 62.913 60.000 9.73 0.00 0.00 5.18
24 25 3.190849 CTGACCACGATGCGCTGG 61.191 66.667 9.73 10.81 35.41 4.85
25 26 3.939837 CTGACCACGATGCGCTGGT 62.940 63.158 18.01 18.01 41.25 4.00
26 27 3.490759 GACCACGATGCGCTGGTG 61.491 66.667 22.28 18.70 39.72 4.17
29 30 3.792047 CACGATGCGCTGGTGGTG 61.792 66.667 9.73 8.75 30.52 4.17
31 32 4.758251 CGATGCGCTGGTGGTGGA 62.758 66.667 9.73 0.00 0.00 4.02
32 33 3.127533 GATGCGCTGGTGGTGGAC 61.128 66.667 9.73 0.00 0.00 4.02
35 36 4.760047 GCGCTGGTGGTGGACGAT 62.760 66.667 0.00 0.00 0.00 3.73
36 37 2.889617 CGCTGGTGGTGGACGATA 59.110 61.111 0.00 0.00 0.00 2.92
37 38 1.216977 CGCTGGTGGTGGACGATAA 59.783 57.895 0.00 0.00 0.00 1.75
38 39 1.082117 CGCTGGTGGTGGACGATAAC 61.082 60.000 0.00 0.00 0.00 1.89
39 40 0.249398 GCTGGTGGTGGACGATAACT 59.751 55.000 0.00 0.00 0.00 2.24
40 41 1.479323 GCTGGTGGTGGACGATAACTA 59.521 52.381 0.00 0.00 0.00 2.24
41 42 2.481449 GCTGGTGGTGGACGATAACTAG 60.481 54.545 0.00 0.00 0.00 2.57
42 43 2.758979 CTGGTGGTGGACGATAACTAGT 59.241 50.000 0.00 0.00 0.00 2.57
43 44 2.756760 TGGTGGTGGACGATAACTAGTC 59.243 50.000 0.00 0.00 36.70 2.59
44 45 3.022406 GGTGGTGGACGATAACTAGTCT 58.978 50.000 0.00 0.00 37.52 3.24
45 46 4.202441 GGTGGTGGACGATAACTAGTCTA 58.798 47.826 0.00 0.00 37.52 2.59
46 47 4.036144 GGTGGTGGACGATAACTAGTCTAC 59.964 50.000 0.00 3.95 44.61 2.59
47 48 3.873361 TGGTGGACGATAACTAGTCTACG 59.127 47.826 0.00 4.97 45.74 3.51
48 49 3.249559 GGTGGACGATAACTAGTCTACGG 59.750 52.174 15.86 1.43 45.74 4.02
49 50 3.249559 GTGGACGATAACTAGTCTACGGG 59.750 52.174 15.86 0.57 38.65 5.28
50 51 2.225255 GGACGATAACTAGTCTACGGGC 59.775 54.545 15.86 9.60 37.52 6.13
51 52 2.225255 GACGATAACTAGTCTACGGGCC 59.775 54.545 15.86 0.00 34.74 5.80
52 53 2.158696 ACGATAACTAGTCTACGGGCCT 60.159 50.000 0.84 0.00 0.00 5.19
53 54 2.883386 CGATAACTAGTCTACGGGCCTT 59.117 50.000 0.84 0.00 0.00 4.35
54 55 3.304525 CGATAACTAGTCTACGGGCCTTG 60.305 52.174 0.84 0.00 0.00 3.61
55 56 2.226962 AACTAGTCTACGGGCCTTGA 57.773 50.000 0.84 0.00 0.00 3.02
56 57 2.226962 ACTAGTCTACGGGCCTTGAA 57.773 50.000 0.84 0.00 0.00 2.69
57 58 2.532843 ACTAGTCTACGGGCCTTGAAA 58.467 47.619 0.84 0.00 0.00 2.69
58 59 2.233186 ACTAGTCTACGGGCCTTGAAAC 59.767 50.000 0.84 0.00 0.00 2.78
59 60 0.037605 AGTCTACGGGCCTTGAAACG 60.038 55.000 0.84 0.00 0.00 3.60
60 61 1.375013 TCTACGGGCCTTGAAACGC 60.375 57.895 0.84 0.00 0.00 4.84
61 62 2.358984 TACGGGCCTTGAAACGCC 60.359 61.111 0.84 0.00 44.92 5.68
65 66 2.909965 GGCCTTGAAACGCCACCA 60.910 61.111 0.00 0.00 45.01 4.17
66 67 2.275380 GGCCTTGAAACGCCACCAT 61.275 57.895 0.00 0.00 45.01 3.55
67 68 1.665442 GCCTTGAAACGCCACCATT 59.335 52.632 0.00 0.00 0.00 3.16
68 69 0.667184 GCCTTGAAACGCCACCATTG 60.667 55.000 0.00 0.00 0.00 2.82
70 71 0.673437 CTTGAAACGCCACCATTGGT 59.327 50.000 1.37 1.37 45.98 3.67
71 72 0.671251 TTGAAACGCCACCATTGGTC 59.329 50.000 5.04 0.00 45.98 4.02
72 73 1.209127 GAAACGCCACCATTGGTCG 59.791 57.895 5.04 10.30 45.98 4.79
73 74 2.796245 GAAACGCCACCATTGGTCGC 62.796 60.000 14.71 14.71 45.98 5.19
90 91 3.061848 CCGCGGGCAAGGTTGATT 61.062 61.111 20.10 0.00 0.00 2.57
91 92 2.635443 CCGCGGGCAAGGTTGATTT 61.635 57.895 20.10 0.00 0.00 2.17
92 93 1.309499 CCGCGGGCAAGGTTGATTTA 61.309 55.000 20.10 0.00 0.00 1.40
93 94 0.179174 CGCGGGCAAGGTTGATTTAC 60.179 55.000 0.00 0.00 0.00 2.01
94 95 0.172578 GCGGGCAAGGTTGATTTACC 59.827 55.000 0.00 0.00 38.53 2.85
95 96 0.815095 CGGGCAAGGTTGATTTACCC 59.185 55.000 0.00 0.00 39.08 3.69
96 97 1.191535 GGGCAAGGTTGATTTACCCC 58.808 55.000 0.00 0.00 39.08 4.95
97 98 1.551329 GGGCAAGGTTGATTTACCCCA 60.551 52.381 0.00 0.00 39.08 4.96
98 99 1.548719 GGCAAGGTTGATTTACCCCAC 59.451 52.381 0.00 0.00 39.08 4.61
99 100 1.548719 GCAAGGTTGATTTACCCCACC 59.451 52.381 0.00 0.00 39.08 4.61
100 101 2.176045 CAAGGTTGATTTACCCCACCC 58.824 52.381 0.00 0.00 39.08 4.61
101 102 0.708209 AGGTTGATTTACCCCACCCC 59.292 55.000 0.00 0.00 39.08 4.95
102 103 0.324923 GGTTGATTTACCCCACCCCC 60.325 60.000 0.00 0.00 31.71 5.40
116 117 3.495729 CCCCCAGCACCTTGTACT 58.504 61.111 0.00 0.00 0.00 2.73
117 118 1.299976 CCCCCAGCACCTTGTACTC 59.700 63.158 0.00 0.00 0.00 2.59
118 119 1.488705 CCCCCAGCACCTTGTACTCA 61.489 60.000 0.00 0.00 0.00 3.41
119 120 0.400213 CCCCAGCACCTTGTACTCAA 59.600 55.000 0.00 0.00 0.00 3.02
120 121 1.202879 CCCCAGCACCTTGTACTCAAA 60.203 52.381 0.00 0.00 32.87 2.69
121 122 2.582052 CCCAGCACCTTGTACTCAAAA 58.418 47.619 0.00 0.00 32.87 2.44
122 123 3.157087 CCCAGCACCTTGTACTCAAAAT 58.843 45.455 0.00 0.00 32.87 1.82
123 124 3.191371 CCCAGCACCTTGTACTCAAAATC 59.809 47.826 0.00 0.00 32.87 2.17
124 125 3.820467 CCAGCACCTTGTACTCAAAATCA 59.180 43.478 0.00 0.00 32.87 2.57
125 126 4.320494 CCAGCACCTTGTACTCAAAATCAC 60.320 45.833 0.00 0.00 32.87 3.06
126 127 3.821033 AGCACCTTGTACTCAAAATCACC 59.179 43.478 0.00 0.00 32.87 4.02
127 128 3.364964 GCACCTTGTACTCAAAATCACCG 60.365 47.826 0.00 0.00 32.87 4.94
128 129 3.813166 CACCTTGTACTCAAAATCACCGT 59.187 43.478 0.00 0.00 32.87 4.83
129 130 4.992319 CACCTTGTACTCAAAATCACCGTA 59.008 41.667 0.00 0.00 32.87 4.02
130 131 4.992951 ACCTTGTACTCAAAATCACCGTAC 59.007 41.667 0.00 0.00 32.87 3.67
131 132 4.090930 CCTTGTACTCAAAATCACCGTACG 59.909 45.833 8.69 8.69 34.66 3.67
132 133 4.502171 TGTACTCAAAATCACCGTACGA 57.498 40.909 18.76 0.00 34.66 3.43
133 134 4.869215 TGTACTCAAAATCACCGTACGAA 58.131 39.130 18.76 1.76 34.66 3.85
134 135 4.681025 TGTACTCAAAATCACCGTACGAAC 59.319 41.667 18.76 0.00 34.66 3.95
135 136 3.062042 ACTCAAAATCACCGTACGAACC 58.938 45.455 18.76 0.00 0.00 3.62
136 137 2.414138 CTCAAAATCACCGTACGAACCC 59.586 50.000 18.76 0.00 0.00 4.11
137 138 2.037511 TCAAAATCACCGTACGAACCCT 59.962 45.455 18.76 0.00 0.00 4.34
138 139 3.257873 TCAAAATCACCGTACGAACCCTA 59.742 43.478 18.76 0.00 0.00 3.53
139 140 3.959535 AAATCACCGTACGAACCCTAA 57.040 42.857 18.76 0.00 0.00 2.69
140 141 3.959535 AATCACCGTACGAACCCTAAA 57.040 42.857 18.76 0.00 0.00 1.85
141 142 3.959535 ATCACCGTACGAACCCTAAAA 57.040 42.857 18.76 0.00 0.00 1.52
142 143 3.959535 TCACCGTACGAACCCTAAAAT 57.040 42.857 18.76 0.00 0.00 1.82
143 144 3.848726 TCACCGTACGAACCCTAAAATC 58.151 45.455 18.76 0.00 0.00 2.17
144 145 2.931969 CACCGTACGAACCCTAAAATCC 59.068 50.000 18.76 0.00 0.00 3.01
145 146 2.195922 CCGTACGAACCCTAAAATCCG 58.804 52.381 18.76 0.00 0.00 4.18
146 147 2.159254 CCGTACGAACCCTAAAATCCGA 60.159 50.000 18.76 0.00 0.00 4.55
147 148 3.491447 CCGTACGAACCCTAAAATCCGAT 60.491 47.826 18.76 0.00 0.00 4.18
148 149 3.488310 CGTACGAACCCTAAAATCCGATG 59.512 47.826 10.44 0.00 0.00 3.84
149 150 2.285977 ACGAACCCTAAAATCCGATGC 58.714 47.619 0.00 0.00 0.00 3.91
150 151 2.093128 ACGAACCCTAAAATCCGATGCT 60.093 45.455 0.00 0.00 0.00 3.79
151 152 2.544267 CGAACCCTAAAATCCGATGCTC 59.456 50.000 0.00 0.00 0.00 4.26
152 153 2.240493 ACCCTAAAATCCGATGCTCG 57.760 50.000 0.00 0.00 40.07 5.03
153 154 1.760613 ACCCTAAAATCCGATGCTCGA 59.239 47.619 7.07 0.00 43.74 4.04
154 155 2.169769 ACCCTAAAATCCGATGCTCGAA 59.830 45.455 7.07 0.00 43.74 3.71
155 156 3.202906 CCCTAAAATCCGATGCTCGAAA 58.797 45.455 7.07 0.00 43.74 3.46
156 157 3.815401 CCCTAAAATCCGATGCTCGAAAT 59.185 43.478 7.07 0.00 43.74 2.17
157 158 4.083802 CCCTAAAATCCGATGCTCGAAATC 60.084 45.833 7.07 0.00 43.74 2.17
158 159 3.971032 AAAATCCGATGCTCGAAATCC 57.029 42.857 7.07 0.00 43.74 3.01
159 160 2.620251 AATCCGATGCTCGAAATCCA 57.380 45.000 7.07 0.00 43.74 3.41
160 161 2.620251 ATCCGATGCTCGAAATCCAA 57.380 45.000 7.07 0.00 43.74 3.53
161 162 2.620251 TCCGATGCTCGAAATCCAAT 57.380 45.000 7.07 0.00 43.74 3.16
162 163 2.483876 TCCGATGCTCGAAATCCAATC 58.516 47.619 7.07 0.00 43.74 2.67
163 164 1.532868 CCGATGCTCGAAATCCAATCC 59.467 52.381 7.07 0.00 43.74 3.01
164 165 1.532868 CGATGCTCGAAATCCAATCCC 59.467 52.381 0.00 0.00 43.74 3.85
165 166 1.882623 GATGCTCGAAATCCAATCCCC 59.117 52.381 0.00 0.00 0.00 4.81
166 167 0.918983 TGCTCGAAATCCAATCCCCT 59.081 50.000 0.00 0.00 0.00 4.79
167 168 2.123589 TGCTCGAAATCCAATCCCCTA 58.876 47.619 0.00 0.00 0.00 3.53
168 169 2.507886 TGCTCGAAATCCAATCCCCTAA 59.492 45.455 0.00 0.00 0.00 2.69
169 170 2.879026 GCTCGAAATCCAATCCCCTAAC 59.121 50.000 0.00 0.00 0.00 2.34
170 171 3.477530 CTCGAAATCCAATCCCCTAACC 58.522 50.000 0.00 0.00 0.00 2.85
171 172 2.158871 TCGAAATCCAATCCCCTAACCG 60.159 50.000 0.00 0.00 0.00 4.44
172 173 2.420967 CGAAATCCAATCCCCTAACCGT 60.421 50.000 0.00 0.00 0.00 4.83
173 174 3.211865 GAAATCCAATCCCCTAACCGTC 58.788 50.000 0.00 0.00 0.00 4.79
174 175 1.137697 ATCCAATCCCCTAACCGTCC 58.862 55.000 0.00 0.00 0.00 4.79
175 176 1.145377 CCAATCCCCTAACCGTCCG 59.855 63.158 0.00 0.00 0.00 4.79
176 177 1.145377 CAATCCCCTAACCGTCCGG 59.855 63.158 3.76 3.76 42.03 5.14
191 192 3.805971 CCGTCCGGTATTAAAACTGATCC 59.194 47.826 0.00 0.00 0.00 3.36
192 193 3.805971 CGTCCGGTATTAAAACTGATCCC 59.194 47.826 0.00 0.00 0.00 3.85
193 194 4.132336 GTCCGGTATTAAAACTGATCCCC 58.868 47.826 0.00 0.00 0.00 4.81
194 195 3.781407 TCCGGTATTAAAACTGATCCCCA 59.219 43.478 0.00 0.00 0.00 4.96
195 196 4.227754 TCCGGTATTAAAACTGATCCCCAA 59.772 41.667 0.00 0.00 0.00 4.12
196 197 4.337274 CCGGTATTAAAACTGATCCCCAAC 59.663 45.833 0.00 0.00 0.00 3.77
197 198 4.034742 CGGTATTAAAACTGATCCCCAACG 59.965 45.833 0.00 0.00 0.00 4.10
198 199 4.201980 GGTATTAAAACTGATCCCCAACGC 60.202 45.833 0.00 0.00 0.00 4.84
199 200 2.871096 TAAAACTGATCCCCAACGCT 57.129 45.000 0.00 0.00 0.00 5.07
200 201 1.995376 AAAACTGATCCCCAACGCTT 58.005 45.000 0.00 0.00 0.00 4.68
201 202 1.247567 AAACTGATCCCCAACGCTTG 58.752 50.000 0.00 0.00 0.00 4.01
202 203 0.400213 AACTGATCCCCAACGCTTGA 59.600 50.000 0.00 0.00 0.00 3.02
203 204 0.036010 ACTGATCCCCAACGCTTGAG 60.036 55.000 0.00 0.00 0.00 3.02
204 205 0.036010 CTGATCCCCAACGCTTGAGT 60.036 55.000 0.00 0.00 0.00 3.41
205 206 0.036388 TGATCCCCAACGCTTGAGTC 60.036 55.000 0.00 0.00 0.00 3.36
206 207 1.079127 ATCCCCAACGCTTGAGTCG 60.079 57.895 0.15 0.00 0.00 4.18
207 208 1.541310 ATCCCCAACGCTTGAGTCGA 61.541 55.000 0.15 0.00 0.00 4.20
208 209 1.079127 CCCCAACGCTTGAGTCGAT 60.079 57.895 0.00 0.00 0.00 3.59
209 210 0.673644 CCCCAACGCTTGAGTCGATT 60.674 55.000 0.00 0.00 0.00 3.34
210 211 0.443869 CCCAACGCTTGAGTCGATTG 59.556 55.000 0.00 0.00 0.00 2.67
211 212 0.179215 CCAACGCTTGAGTCGATTGC 60.179 55.000 0.00 0.00 0.00 3.56
213 214 2.697425 CGCTTGAGTCGATTGCGG 59.303 61.111 6.19 0.00 42.46 5.69
214 215 1.805539 CGCTTGAGTCGATTGCGGA 60.806 57.895 6.19 0.00 42.46 5.54
215 216 1.351430 CGCTTGAGTCGATTGCGGAA 61.351 55.000 6.19 0.00 42.46 4.30
216 217 0.796312 GCTTGAGTCGATTGCGGAAA 59.204 50.000 0.00 0.00 38.28 3.13
217 218 1.398390 GCTTGAGTCGATTGCGGAAAT 59.602 47.619 0.00 0.00 38.28 2.17
218 219 2.537730 GCTTGAGTCGATTGCGGAAATC 60.538 50.000 0.00 0.00 41.23 2.17
219 220 1.651987 TGAGTCGATTGCGGAAATCC 58.348 50.000 3.09 0.00 41.55 3.01
220 221 1.066502 TGAGTCGATTGCGGAAATCCA 60.067 47.619 3.09 0.00 41.55 3.41
221 222 2.006888 GAGTCGATTGCGGAAATCCAA 58.993 47.619 3.09 0.00 41.55 3.53
222 223 2.614057 GAGTCGATTGCGGAAATCCAAT 59.386 45.455 3.09 0.00 41.55 3.16
223 224 2.614057 AGTCGATTGCGGAAATCCAATC 59.386 45.455 3.09 0.00 41.55 2.67
224 225 2.614057 GTCGATTGCGGAAATCCAATCT 59.386 45.455 3.09 0.00 43.09 2.40
225 226 3.807622 GTCGATTGCGGAAATCCAATCTA 59.192 43.478 3.09 0.00 43.09 1.98
226 227 4.272504 GTCGATTGCGGAAATCCAATCTAA 59.727 41.667 3.09 0.00 43.09 2.10
227 228 4.878971 TCGATTGCGGAAATCCAATCTAAA 59.121 37.500 3.09 0.00 43.09 1.85
228 229 5.355630 TCGATTGCGGAAATCCAATCTAAAA 59.644 36.000 3.09 0.00 43.09 1.52
229 230 5.455525 CGATTGCGGAAATCCAATCTAAAAC 59.544 40.000 3.09 0.00 43.09 2.43
230 231 4.349663 TGCGGAAATCCAATCTAAAACG 57.650 40.909 0.00 0.00 35.14 3.60
231 232 3.105937 GCGGAAATCCAATCTAAAACGC 58.894 45.455 0.00 0.00 36.46 4.84
232 233 3.691498 CGGAAATCCAATCTAAAACGCC 58.309 45.455 0.00 0.00 35.14 5.68
233 234 3.127895 CGGAAATCCAATCTAAAACGCCA 59.872 43.478 0.00 0.00 35.14 5.69
234 235 4.380023 CGGAAATCCAATCTAAAACGCCAA 60.380 41.667 0.00 0.00 35.14 4.52
235 236 5.660460 GGAAATCCAATCTAAAACGCCAAT 58.340 37.500 0.00 0.00 35.64 3.16
236 237 5.748630 GGAAATCCAATCTAAAACGCCAATC 59.251 40.000 0.00 0.00 35.64 2.67
237 238 4.552166 ATCCAATCTAAAACGCCAATCG 57.448 40.909 0.00 0.00 45.38 3.34
238 239 3.601435 TCCAATCTAAAACGCCAATCGA 58.399 40.909 0.00 0.00 41.67 3.59
239 240 4.004314 TCCAATCTAAAACGCCAATCGAA 58.996 39.130 0.00 0.00 41.67 3.71
240 241 4.638421 TCCAATCTAAAACGCCAATCGAAT 59.362 37.500 0.00 0.00 41.67 3.34
241 242 5.818336 TCCAATCTAAAACGCCAATCGAATA 59.182 36.000 0.00 0.00 41.67 1.75
242 243 5.907391 CCAATCTAAAACGCCAATCGAATAC 59.093 40.000 0.00 0.00 41.67 1.89
243 244 6.457663 CCAATCTAAAACGCCAATCGAATACA 60.458 38.462 0.00 0.00 41.67 2.29
244 245 5.712217 TCTAAAACGCCAATCGAATACAG 57.288 39.130 0.00 0.00 41.67 2.74
245 246 3.757745 AAAACGCCAATCGAATACAGG 57.242 42.857 0.00 0.00 41.67 4.00
246 247 2.684001 AACGCCAATCGAATACAGGA 57.316 45.000 0.00 0.00 41.67 3.86
247 248 2.684001 ACGCCAATCGAATACAGGAA 57.316 45.000 0.00 0.00 41.67 3.36
248 249 2.980568 ACGCCAATCGAATACAGGAAA 58.019 42.857 0.00 0.00 41.67 3.13
249 250 3.541632 ACGCCAATCGAATACAGGAAAT 58.458 40.909 0.00 0.00 41.67 2.17
250 251 3.560068 ACGCCAATCGAATACAGGAAATC 59.440 43.478 0.00 0.00 41.67 2.17
251 252 3.559655 CGCCAATCGAATACAGGAAATCA 59.440 43.478 0.00 0.00 41.67 2.57
252 253 4.035091 CGCCAATCGAATACAGGAAATCAA 59.965 41.667 0.00 0.00 41.67 2.57
253 254 5.448496 CGCCAATCGAATACAGGAAATCAAA 60.448 40.000 0.00 0.00 41.67 2.69
254 255 6.329496 GCCAATCGAATACAGGAAATCAAAA 58.671 36.000 0.00 0.00 0.00 2.44
255 256 6.811170 GCCAATCGAATACAGGAAATCAAAAA 59.189 34.615 0.00 0.00 0.00 1.94
256 257 7.009540 GCCAATCGAATACAGGAAATCAAAAAG 59.990 37.037 0.00 0.00 0.00 2.27
257 258 8.243426 CCAATCGAATACAGGAAATCAAAAAGA 58.757 33.333 0.00 0.00 0.00 2.52
258 259 9.793252 CAATCGAATACAGGAAATCAAAAAGAT 57.207 29.630 0.00 0.00 39.09 2.40
259 260 9.793252 AATCGAATACAGGAAATCAAAAAGATG 57.207 29.630 0.00 0.00 36.96 2.90
260 261 7.761409 TCGAATACAGGAAATCAAAAAGATGG 58.239 34.615 0.00 0.00 36.96 3.51
261 262 6.974622 CGAATACAGGAAATCAAAAAGATGGG 59.025 38.462 0.00 0.00 36.96 4.00
262 263 7.148086 CGAATACAGGAAATCAAAAAGATGGGA 60.148 37.037 0.00 0.00 36.96 4.37
263 264 5.728637 ACAGGAAATCAAAAAGATGGGAC 57.271 39.130 0.00 0.00 36.96 4.46
276 277 3.257935 TGGGACAAATGGCTTACCG 57.742 52.632 0.00 0.00 34.12 4.02
277 278 0.963355 TGGGACAAATGGCTTACCGC 60.963 55.000 0.00 0.00 34.12 5.68
286 287 3.903783 GCTTACCGCCATTGCTGA 58.096 55.556 0.00 0.00 34.43 4.26
287 288 1.723870 GCTTACCGCCATTGCTGAG 59.276 57.895 0.00 0.00 34.43 3.35
288 289 1.723870 CTTACCGCCATTGCTGAGC 59.276 57.895 0.00 0.00 34.43 4.26
289 290 0.745845 CTTACCGCCATTGCTGAGCT 60.746 55.000 5.83 0.00 34.43 4.09
290 291 1.026182 TTACCGCCATTGCTGAGCTG 61.026 55.000 5.83 0.00 34.43 4.24
291 292 4.189188 CCGCCATTGCTGAGCTGC 62.189 66.667 5.83 2.37 34.43 5.25
292 293 3.132139 CGCCATTGCTGAGCTGCT 61.132 61.111 5.83 0.00 34.43 4.24
293 294 2.490217 GCCATTGCTGAGCTGCTG 59.510 61.111 7.01 0.11 33.53 4.41
294 295 2.490217 CCATTGCTGAGCTGCTGC 59.510 61.111 7.01 7.62 41.36 5.25
295 296 2.490217 CATTGCTGAGCTGCTGCC 59.510 61.111 7.01 4.62 40.39 4.85
296 297 3.132139 ATTGCTGAGCTGCTGCCG 61.132 61.111 7.01 2.50 40.39 5.69
316 317 3.414700 GCGGTGCTGAAGACGGTG 61.415 66.667 0.00 0.00 0.00 4.94
317 318 2.338620 CGGTGCTGAAGACGGTGA 59.661 61.111 0.00 0.00 0.00 4.02
318 319 1.079819 CGGTGCTGAAGACGGTGAT 60.080 57.895 0.00 0.00 0.00 3.06
319 320 1.078759 CGGTGCTGAAGACGGTGATC 61.079 60.000 0.00 0.00 0.00 2.92
320 321 1.078759 GGTGCTGAAGACGGTGATCG 61.079 60.000 0.00 0.00 45.88 3.69
321 322 1.446099 TGCTGAAGACGGTGATCGC 60.446 57.895 0.00 0.00 43.89 4.58
322 323 2.167861 GCTGAAGACGGTGATCGCC 61.168 63.158 15.74 15.74 43.89 5.54
330 331 4.430765 GGTGATCGCCGTCGGTGT 62.431 66.667 23.47 11.66 34.40 4.16
331 332 3.179265 GTGATCGCCGTCGGTGTG 61.179 66.667 23.47 9.14 34.40 3.82
332 333 3.366915 TGATCGCCGTCGGTGTGA 61.367 61.111 23.47 14.09 34.40 3.58
333 334 2.579787 GATCGCCGTCGGTGTGAG 60.580 66.667 23.47 5.72 34.40 3.51
334 335 3.047718 GATCGCCGTCGGTGTGAGA 62.048 63.158 23.47 10.63 34.40 3.27
335 336 2.921538 GATCGCCGTCGGTGTGAGAG 62.922 65.000 23.47 2.38 34.40 3.20
336 337 4.039357 CGCCGTCGGTGTGAGAGT 62.039 66.667 16.85 0.00 0.00 3.24
337 338 2.430921 GCCGTCGGTGTGAGAGTG 60.431 66.667 13.94 0.00 0.00 3.51
338 339 2.258591 CCGTCGGTGTGAGAGTGG 59.741 66.667 2.08 0.00 0.00 4.00
339 340 2.258591 CGTCGGTGTGAGAGTGGG 59.741 66.667 0.00 0.00 0.00 4.61
340 341 2.657237 GTCGGTGTGAGAGTGGGG 59.343 66.667 0.00 0.00 0.00 4.96
341 342 1.906824 GTCGGTGTGAGAGTGGGGA 60.907 63.158 0.00 0.00 0.00 4.81
342 343 1.078528 TCGGTGTGAGAGTGGGGAT 59.921 57.895 0.00 0.00 0.00 3.85
343 344 0.333652 TCGGTGTGAGAGTGGGGATA 59.666 55.000 0.00 0.00 0.00 2.59
344 345 0.747255 CGGTGTGAGAGTGGGGATAG 59.253 60.000 0.00 0.00 0.00 2.08
345 346 1.123928 GGTGTGAGAGTGGGGATAGG 58.876 60.000 0.00 0.00 0.00 2.57
346 347 1.123928 GTGTGAGAGTGGGGATAGGG 58.876 60.000 0.00 0.00 0.00 3.53
347 348 0.031111 TGTGAGAGTGGGGATAGGGG 60.031 60.000 0.00 0.00 0.00 4.79
348 349 0.264955 GTGAGAGTGGGGATAGGGGA 59.735 60.000 0.00 0.00 0.00 4.81
349 350 0.563173 TGAGAGTGGGGATAGGGGAG 59.437 60.000 0.00 0.00 0.00 4.30
350 351 0.861155 GAGAGTGGGGATAGGGGAGA 59.139 60.000 0.00 0.00 0.00 3.71
351 352 0.863956 AGAGTGGGGATAGGGGAGAG 59.136 60.000 0.00 0.00 0.00 3.20
352 353 0.861155 GAGTGGGGATAGGGGAGAGA 59.139 60.000 0.00 0.00 0.00 3.10
353 354 0.863956 AGTGGGGATAGGGGAGAGAG 59.136 60.000 0.00 0.00 0.00 3.20
354 355 0.861155 GTGGGGATAGGGGAGAGAGA 59.139 60.000 0.00 0.00 0.00 3.10
355 356 1.162505 TGGGGATAGGGGAGAGAGAG 58.837 60.000 0.00 0.00 0.00 3.20
356 357 0.252057 GGGGATAGGGGAGAGAGAGC 60.252 65.000 0.00 0.00 0.00 4.09
357 358 0.610785 GGGATAGGGGAGAGAGAGCG 60.611 65.000 0.00 0.00 0.00 5.03
358 359 0.610785 GGATAGGGGAGAGAGAGCGG 60.611 65.000 0.00 0.00 0.00 5.52
359 360 0.111639 GATAGGGGAGAGAGAGCGGT 59.888 60.000 0.00 0.00 0.00 5.68
360 361 0.178975 ATAGGGGAGAGAGAGCGGTG 60.179 60.000 0.00 0.00 0.00 4.94
361 362 1.279749 TAGGGGAGAGAGAGCGGTGA 61.280 60.000 0.00 0.00 0.00 4.02
362 363 2.124693 GGGGAGAGAGAGCGGTGAG 61.125 68.421 0.00 0.00 0.00 3.51
363 364 2.124693 GGGAGAGAGAGCGGTGAGG 61.125 68.421 0.00 0.00 0.00 3.86
364 365 2.124693 GGAGAGAGAGCGGTGAGGG 61.125 68.421 0.00 0.00 0.00 4.30
365 366 1.379309 GAGAGAGAGCGGTGAGGGT 60.379 63.158 0.00 0.00 0.00 4.34
366 367 0.107116 GAGAGAGAGCGGTGAGGGTA 60.107 60.000 0.00 0.00 0.00 3.69
367 368 0.331954 AGAGAGAGCGGTGAGGGTAA 59.668 55.000 0.00 0.00 0.00 2.85
368 369 1.063567 AGAGAGAGCGGTGAGGGTAAT 60.064 52.381 0.00 0.00 0.00 1.89
369 370 1.757699 GAGAGAGCGGTGAGGGTAATT 59.242 52.381 0.00 0.00 0.00 1.40
370 371 2.168728 GAGAGAGCGGTGAGGGTAATTT 59.831 50.000 0.00 0.00 0.00 1.82
371 372 3.371965 AGAGAGCGGTGAGGGTAATTTA 58.628 45.455 0.00 0.00 0.00 1.40
372 373 3.132467 AGAGAGCGGTGAGGGTAATTTAC 59.868 47.826 0.00 0.00 0.00 2.01
373 374 2.159142 AGAGCGGTGAGGGTAATTTACG 60.159 50.000 0.00 0.00 0.00 3.18
374 375 0.654160 GCGGTGAGGGTAATTTACGC 59.346 55.000 14.02 14.02 41.44 4.42
375 376 1.292992 CGGTGAGGGTAATTTACGCC 58.707 55.000 17.21 11.42 42.01 5.68
376 377 1.292992 GGTGAGGGTAATTTACGCCG 58.707 55.000 17.21 0.00 42.01 6.46
377 378 0.654160 GTGAGGGTAATTTACGCCGC 59.346 55.000 17.21 12.89 42.01 6.53
378 379 0.249676 TGAGGGTAATTTACGCCGCA 59.750 50.000 17.21 14.79 42.01 5.69
379 380 0.935196 GAGGGTAATTTACGCCGCAG 59.065 55.000 17.21 0.00 42.01 5.18
380 381 0.251073 AGGGTAATTTACGCCGCAGT 59.749 50.000 17.21 0.00 42.01 4.40
381 382 1.089112 GGGTAATTTACGCCGCAGTT 58.911 50.000 11.48 0.00 35.79 3.16
382 383 1.469703 GGGTAATTTACGCCGCAGTTT 59.530 47.619 11.48 0.00 35.79 2.66
383 384 2.095110 GGGTAATTTACGCCGCAGTTTT 60.095 45.455 11.48 0.00 35.79 2.43
384 385 2.912345 GGTAATTTACGCCGCAGTTTTG 59.088 45.455 0.64 0.00 0.00 2.44
385 386 2.785713 AATTTACGCCGCAGTTTTGT 57.214 40.000 0.00 0.00 0.00 2.83
386 387 2.044888 ATTTACGCCGCAGTTTTGTG 57.955 45.000 0.00 0.00 34.56 3.33
387 388 1.015109 TTTACGCCGCAGTTTTGTGA 58.985 45.000 0.00 0.00 36.95 3.58
388 389 1.015109 TTACGCCGCAGTTTTGTGAA 58.985 45.000 0.00 0.00 36.95 3.18
389 390 1.015109 TACGCCGCAGTTTTGTGAAA 58.985 45.000 0.00 0.00 36.95 2.69
390 391 0.524604 ACGCCGCAGTTTTGTGAAAC 60.525 50.000 0.00 0.00 44.35 2.78
402 403 2.601562 GTGAAACAACTCGACGCCT 58.398 52.632 0.00 0.00 36.32 5.52
403 404 0.507358 GTGAAACAACTCGACGCCTC 59.493 55.000 0.00 0.00 36.32 4.70
404 405 0.937699 TGAAACAACTCGACGCCTCG 60.938 55.000 0.00 0.00 41.65 4.63
405 406 0.662374 GAAACAACTCGACGCCTCGA 60.662 55.000 7.57 7.57 46.85 4.04
415 416 4.838486 CGCCTCGAGACTGCCGTC 62.838 72.222 15.71 0.00 40.54 4.79
442 443 2.520904 GCCTCGAGTTGCATCGCTC 61.521 63.158 12.31 4.40 42.43 5.03
462 463 0.250295 GGGCCTGGCTTTGGAAAAAC 60.250 55.000 19.68 0.00 0.00 2.43
469 473 0.663269 GCTTTGGAAAAACGGCCTCG 60.663 55.000 0.00 0.00 43.02 4.63
486 490 3.394836 GCCCGTTCCCTCTGAGCT 61.395 66.667 0.00 0.00 0.00 4.09
494 498 2.139484 CCCTCTGAGCTAGGCCCAG 61.139 68.421 0.00 0.00 32.34 4.45
500 504 1.687493 GAGCTAGGCCCAGAGGTGT 60.687 63.158 0.85 0.00 34.57 4.16
501 505 1.965754 GAGCTAGGCCCAGAGGTGTG 61.966 65.000 0.85 0.00 34.57 3.82
504 508 0.693049 CTAGGCCCAGAGGTGTGTTT 59.307 55.000 0.00 0.00 34.57 2.83
517 536 7.023575 CAGAGGTGTGTTTAGTATTTTGATGC 58.976 38.462 0.00 0.00 0.00 3.91
519 538 5.092781 GGTGTGTTTAGTATTTTGATGCGG 58.907 41.667 0.00 0.00 0.00 5.69
520 539 5.335348 GGTGTGTTTAGTATTTTGATGCGGT 60.335 40.000 0.00 0.00 0.00 5.68
521 540 6.128227 GGTGTGTTTAGTATTTTGATGCGGTA 60.128 38.462 0.00 0.00 0.00 4.02
524 543 9.163899 TGTGTTTAGTATTTTGATGCGGTATAA 57.836 29.630 0.00 0.00 0.00 0.98
525 544 9.991388 GTGTTTAGTATTTTGATGCGGTATAAA 57.009 29.630 0.00 0.00 0.00 1.40
534 553 8.459521 TTTTGATGCGGTATAAACAATCAAAG 57.540 30.769 8.20 0.00 39.70 2.77
539 558 5.353123 TGCGGTATAAACAATCAAAGAGGTC 59.647 40.000 0.00 0.00 0.00 3.85
548 567 6.581171 ACAATCAAAGAGGTCAAATTCTCC 57.419 37.500 0.00 0.00 0.00 3.71
549 568 5.478332 ACAATCAAAGAGGTCAAATTCTCCC 59.522 40.000 0.00 0.00 0.00 4.30
550 569 4.034285 TCAAAGAGGTCAAATTCTCCCC 57.966 45.455 0.00 0.00 0.00 4.81
551 570 2.749621 CAAAGAGGTCAAATTCTCCCCG 59.250 50.000 0.00 0.00 0.00 5.73
554 573 0.322546 AGGTCAAATTCTCCCCGCAC 60.323 55.000 0.00 0.00 0.00 5.34
556 575 1.376683 TCAAATTCTCCCCGCACGG 60.377 57.895 1.02 1.02 0.00 4.94
557 576 1.376683 CAAATTCTCCCCGCACGGA 60.377 57.895 11.42 0.00 37.50 4.69
558 577 0.748005 CAAATTCTCCCCGCACGGAT 60.748 55.000 11.42 0.00 37.50 4.18
559 578 0.463833 AAATTCTCCCCGCACGGATC 60.464 55.000 11.42 0.00 37.50 3.36
560 579 1.338136 AATTCTCCCCGCACGGATCT 61.338 55.000 11.42 0.00 37.50 2.75
561 580 2.032860 ATTCTCCCCGCACGGATCTG 62.033 60.000 11.42 0.00 37.50 2.90
562 581 4.227134 CTCCCCGCACGGATCTGG 62.227 72.222 11.42 3.03 37.50 3.86
564 583 4.096003 CCCCGCACGGATCTGGTT 62.096 66.667 11.42 0.00 37.50 3.67
567 586 2.819595 CGCACGGATCTGGTTGGG 60.820 66.667 6.47 0.65 0.00 4.12
577 596 4.358841 TGGTTGGGTGGATGCGGG 62.359 66.667 0.00 0.00 0.00 6.13
584 603 2.568090 GTGGATGCGGGCAACAAG 59.432 61.111 0.00 0.00 39.74 3.16
585 604 3.372730 TGGATGCGGGCAACAAGC 61.373 61.111 0.00 0.00 44.65 4.01
597 632 2.584791 GCAACAAGCGTCCAGTAAATG 58.415 47.619 0.00 0.00 0.00 2.32
617 652 0.036875 ACGGCAGGAGAAGGAAAAGG 59.963 55.000 0.00 0.00 0.00 3.11
639 677 2.905075 CACCTGCATATCAAACGAGGA 58.095 47.619 0.00 0.00 0.00 3.71
667 714 1.153429 GGTGGGTGATGCGTCTACC 60.153 63.158 15.32 15.32 0.00 3.18
668 715 1.614241 GGTGGGTGATGCGTCTACCT 61.614 60.000 20.10 0.00 34.87 3.08
669 716 1.108776 GTGGGTGATGCGTCTACCTA 58.891 55.000 20.10 14.79 34.87 3.08
670 717 1.108776 TGGGTGATGCGTCTACCTAC 58.891 55.000 20.10 6.24 34.87 3.18
671 718 0.030369 GGGTGATGCGTCTACCTACG 59.970 60.000 20.10 0.00 45.58 3.51
706 753 2.805099 GTCAAAAGAGAGACACCTGCAG 59.195 50.000 6.78 6.78 34.93 4.41
707 754 1.534595 CAAAAGAGAGACACCTGCAGC 59.465 52.381 8.66 0.00 0.00 5.25
708 755 1.055040 AAAGAGAGACACCTGCAGCT 58.945 50.000 8.66 0.00 0.00 4.24
709 756 0.321021 AAGAGAGACACCTGCAGCTG 59.679 55.000 10.11 10.11 0.00 4.24
710 757 1.741032 GAGAGACACCTGCAGCTGC 60.741 63.158 31.89 31.89 42.50 5.25
722 769 1.276415 GCAGCTGCAAAACAAAACGA 58.724 45.000 33.36 0.00 41.59 3.85
723 770 1.658095 GCAGCTGCAAAACAAAACGAA 59.342 42.857 33.36 0.00 41.59 3.85
724 771 2.285198 GCAGCTGCAAAACAAAACGAAG 60.285 45.455 33.36 0.00 41.59 3.79
725 772 1.926510 AGCTGCAAAACAAAACGAAGC 59.073 42.857 1.02 0.00 0.00 3.86
726 773 1.005032 GCTGCAAAACAAAACGAAGCC 60.005 47.619 0.00 0.00 0.00 4.35
727 774 2.539476 CTGCAAAACAAAACGAAGCCT 58.461 42.857 0.00 0.00 0.00 4.58
728 775 2.266554 TGCAAAACAAAACGAAGCCTG 58.733 42.857 0.00 0.00 0.00 4.85
729 776 2.267426 GCAAAACAAAACGAAGCCTGT 58.733 42.857 0.00 0.00 0.00 4.00
730 777 2.029124 GCAAAACAAAACGAAGCCTGTG 59.971 45.455 0.00 0.00 0.00 3.66
731 778 2.577449 AAACAAAACGAAGCCTGTGG 57.423 45.000 0.00 0.00 0.00 4.17
732 779 1.470051 AACAAAACGAAGCCTGTGGT 58.530 45.000 0.00 0.00 0.00 4.16
733 780 0.738389 ACAAAACGAAGCCTGTGGTG 59.262 50.000 0.00 0.00 0.00 4.17
745 792 1.470890 CCTGTGGTGTGTTTCGTTTGT 59.529 47.619 0.00 0.00 0.00 2.83
785 832 4.521062 GATCGCGAGTGGCTGGCT 62.521 66.667 16.66 0.00 40.44 4.75
786 833 4.827087 ATCGCGAGTGGCTGGCTG 62.827 66.667 16.66 0.00 40.44 4.85
790 837 2.743928 CGAGTGGCTGGCTGGAAC 60.744 66.667 2.00 0.00 0.00 3.62
792 839 4.335647 AGTGGCTGGCTGGAACCG 62.336 66.667 2.00 0.00 0.00 4.44
793 840 4.329545 GTGGCTGGCTGGAACCGA 62.330 66.667 2.00 0.00 0.00 4.69
794 841 3.565214 TGGCTGGCTGGAACCGAA 61.565 61.111 2.00 0.00 0.00 4.30
795 842 3.056328 GGCTGGCTGGAACCGAAC 61.056 66.667 0.00 0.00 0.00 3.95
796 843 3.056328 GCTGGCTGGAACCGAACC 61.056 66.667 0.00 0.00 0.00 3.62
817 866 2.696125 TCCCAAGGGCCATCTCCC 60.696 66.667 6.18 0.00 46.93 4.30
823 872 2.851588 GGGCCATCTCCCTCCCTC 60.852 72.222 4.39 0.00 43.13 4.30
824 873 2.288643 GGCCATCTCCCTCCCTCT 59.711 66.667 0.00 0.00 0.00 3.69
826 875 1.841103 GCCATCTCCCTCCCTCTCC 60.841 68.421 0.00 0.00 0.00 3.71
827 876 1.532794 CCATCTCCCTCCCTCTCCG 60.533 68.421 0.00 0.00 0.00 4.63
828 877 1.532794 CATCTCCCTCCCTCTCCGG 60.533 68.421 0.00 0.00 0.00 5.14
829 878 3.460478 ATCTCCCTCCCTCTCCGGC 62.460 68.421 0.00 0.00 0.00 6.13
830 879 4.150454 CTCCCTCCCTCTCCGGCT 62.150 72.222 0.00 0.00 0.00 5.52
831 880 3.684628 TCCCTCCCTCTCCGGCTT 61.685 66.667 0.00 0.00 0.00 4.35
832 881 3.157949 CCCTCCCTCTCCGGCTTC 61.158 72.222 0.00 0.00 0.00 3.86
833 882 3.157949 CCTCCCTCTCCGGCTTCC 61.158 72.222 0.00 0.00 0.00 3.46
834 883 3.157949 CTCCCTCTCCGGCTTCCC 61.158 72.222 0.00 0.00 0.00 3.97
835 884 4.798682 TCCCTCTCCGGCTTCCCC 62.799 72.222 0.00 0.00 0.00 4.81
837 886 3.787001 CCTCTCCGGCTTCCCCAC 61.787 72.222 0.00 0.00 0.00 4.61
838 887 3.787001 CTCTCCGGCTTCCCCACC 61.787 72.222 0.00 0.00 0.00 4.61
861 910 4.361971 ACCTCTGCCGAGACCCGA 62.362 66.667 6.73 0.00 39.74 5.14
862 911 3.522731 CCTCTGCCGAGACCCGAG 61.523 72.222 6.73 0.00 39.74 4.63
863 912 2.438614 CTCTGCCGAGACCCGAGA 60.439 66.667 0.00 0.00 39.74 4.04
864 913 2.438614 TCTGCCGAGACCCGAGAG 60.439 66.667 0.00 0.00 41.76 3.20
879 928 1.663695 GAGAGGAGAGAGTCAGACCG 58.336 60.000 0.00 0.00 0.00 4.79
882 931 2.419739 GGAGAGAGTCAGACCGGCC 61.420 68.421 0.00 0.00 0.00 6.13
923 972 2.873649 GCCACAGGGAAGACAAGAGAAG 60.874 54.545 0.00 0.00 35.59 2.85
924 973 2.421619 CACAGGGAAGACAAGAGAAGC 58.578 52.381 0.00 0.00 0.00 3.86
952 1011 2.607750 GTGTGGGGAGGAGAGCCA 60.608 66.667 0.00 0.00 36.29 4.75
972 1032 1.627834 ACAGGGAAGAAGAGAAGCCAG 59.372 52.381 0.00 0.00 0.00 4.85
1013 1073 3.195002 CCCCATGCGTGCGTACTG 61.195 66.667 0.00 0.00 0.00 2.74
1014 1074 3.864686 CCCATGCGTGCGTACTGC 61.865 66.667 11.97 11.97 46.70 4.40
1015 1075 2.815211 CCATGCGTGCGTACTGCT 60.815 61.111 17.49 4.99 46.63 4.24
1016 1076 2.396861 CATGCGTGCGTACTGCTG 59.603 61.111 17.49 11.26 46.63 4.41
1017 1077 3.490759 ATGCGTGCGTACTGCTGC 61.491 61.111 17.49 14.94 46.63 5.25
1018 1078 3.939837 ATGCGTGCGTACTGCTGCT 62.940 57.895 17.49 4.42 46.63 4.24
1019 1079 3.843240 GCGTGCGTACTGCTGCTC 61.843 66.667 11.70 0.00 46.63 4.26
1020 1080 2.126307 CGTGCGTACTGCTGCTCT 60.126 61.111 1.24 0.00 46.63 4.09
1021 1081 1.734477 CGTGCGTACTGCTGCTCTT 60.734 57.895 1.24 0.00 46.63 2.85
1031 1093 1.223211 GCTGCTCTTCTCCCCCTTC 59.777 63.158 0.00 0.00 0.00 3.46
1032 1094 1.911471 CTGCTCTTCTCCCCCTTCC 59.089 63.158 0.00 0.00 0.00 3.46
1033 1095 0.620121 CTGCTCTTCTCCCCCTTCCT 60.620 60.000 0.00 0.00 0.00 3.36
1034 1096 0.618968 TGCTCTTCTCCCCCTTCCTC 60.619 60.000 0.00 0.00 0.00 3.71
1035 1097 1.341913 GCTCTTCTCCCCCTTCCTCC 61.342 65.000 0.00 0.00 0.00 4.30
1049 1111 2.204151 CTCCCCTCCCTGGTTGGT 60.204 66.667 0.00 0.00 0.00 3.67
1050 1112 1.852626 CTCCCCTCCCTGGTTGGTT 60.853 63.158 0.00 0.00 0.00 3.67
1064 1126 3.647771 GGTTGGTTCCGCCTCCCT 61.648 66.667 0.00 0.00 38.35 4.20
1088 1150 1.078426 CGTTGATCTCCACCCACCC 60.078 63.158 0.00 0.00 0.00 4.61
1089 1151 1.836999 CGTTGATCTCCACCCACCCA 61.837 60.000 0.00 0.00 0.00 4.51
1090 1152 0.322546 GTTGATCTCCACCCACCCAC 60.323 60.000 0.00 0.00 0.00 4.61
1117 1219 1.128724 GTCGATCTGTGACTGCGTCG 61.129 60.000 9.50 9.50 34.95 5.12
1122 1224 4.337060 TGTGACTGCGTCGGACGG 62.337 66.667 29.30 17.29 42.82 4.79
1135 1237 1.822990 TCGGACGGCTTTCTTGATACT 59.177 47.619 0.00 0.00 0.00 2.12
1136 1238 3.018856 TCGGACGGCTTTCTTGATACTA 58.981 45.455 0.00 0.00 0.00 1.82
1137 1239 3.114065 CGGACGGCTTTCTTGATACTAC 58.886 50.000 0.00 0.00 0.00 2.73
1141 1243 5.642491 GGACGGCTTTCTTGATACTACTTTT 59.358 40.000 0.00 0.00 0.00 2.27
1161 1263 2.122783 TTTTGGCTCCATCCTTACCG 57.877 50.000 0.00 0.00 0.00 4.02
1162 1264 0.393808 TTTGGCTCCATCCTTACCGC 60.394 55.000 0.00 0.00 0.00 5.68
1174 1276 1.468520 CCTTACCGCTCACCATTTGTG 59.531 52.381 0.00 0.00 46.88 3.33
1175 1277 0.878416 TTACCGCTCACCATTTGTGC 59.122 50.000 0.00 0.00 45.03 4.57
1184 1286 1.237285 ACCATTTGTGCGGCACTCTC 61.237 55.000 30.81 8.00 35.11 3.20
1282 1388 3.532542 CCTTCTTCCAACCCGTAAGATC 58.467 50.000 0.00 0.00 43.02 2.75
1291 1397 1.004918 CCGTAAGATCCGATGCCCC 60.005 63.158 0.00 0.00 43.02 5.80
1295 1401 1.415672 TAAGATCCGATGCCCCACCC 61.416 60.000 0.00 0.00 0.00 4.61
1296 1402 4.271016 GATCCGATGCCCCACCCC 62.271 72.222 0.00 0.00 0.00 4.95
1309 1419 0.840722 CCACCCCCACCTGACTAACT 60.841 60.000 0.00 0.00 0.00 2.24
1315 1425 4.098894 CCCCCACCTGACTAACTAACTAA 58.901 47.826 0.00 0.00 0.00 2.24
1340 1451 2.368548 GCCCCTTGATTTGGTTTCAACT 59.631 45.455 0.00 0.00 31.78 3.16
1375 1494 5.885912 GCTCACTCTGTTTATTGGGGATTTA 59.114 40.000 0.00 0.00 0.00 1.40
1376 1495 6.377146 GCTCACTCTGTTTATTGGGGATTTAA 59.623 38.462 0.00 0.00 0.00 1.52
1378 1497 8.893563 TCACTCTGTTTATTGGGGATTTAATT 57.106 30.769 0.00 0.00 0.00 1.40
1379 1498 9.320295 TCACTCTGTTTATTGGGGATTTAATTT 57.680 29.630 0.00 0.00 0.00 1.82
1393 1512 7.668525 GGATTTAATTTATCCCACGTAGGAG 57.331 40.000 9.07 0.00 39.95 3.69
1394 1513 7.222161 GGATTTAATTTATCCCACGTAGGAGT 58.778 38.462 9.07 0.00 39.95 3.85
1395 1514 8.370182 GGATTTAATTTATCCCACGTAGGAGTA 58.630 37.037 9.07 0.00 39.95 2.59
1397 1516 7.902920 TTAATTTATCCCACGTAGGAGTACT 57.097 36.000 9.07 0.00 39.95 2.73
1447 1566 6.176975 TCCTGAATACAATTAAACTGCACG 57.823 37.500 0.00 0.00 0.00 5.34
1459 1578 8.721478 CAATTAAACTGCACGCTCCTTATATAT 58.279 33.333 0.00 0.00 0.00 0.86
1478 1616 1.920762 GCTAGCTAGCGCAGTTTCG 59.079 57.895 28.89 0.00 39.82 3.46
1500 1638 6.706295 TCGGTGCACCAATATCAATCATATA 58.294 36.000 34.16 0.00 35.14 0.86
1501 1639 7.337938 TCGGTGCACCAATATCAATCATATAT 58.662 34.615 34.16 0.00 35.14 0.86
1502 1640 7.828717 TCGGTGCACCAATATCAATCATATATT 59.171 33.333 34.16 0.00 35.14 1.28
1503 1641 8.124823 CGGTGCACCAATATCAATCATATATTC 58.875 37.037 34.16 1.13 35.14 1.75
1547 1685 3.126514 CACATCTTTTGCTACTGCCTCTG 59.873 47.826 0.00 0.00 38.71 3.35
1676 1853 2.040278 CAGTTTGGAATCTGAGTCCCCA 59.960 50.000 20.32 5.45 33.89 4.96
1679 1856 1.289160 TGGAATCTGAGTCCCCAAGG 58.711 55.000 20.32 0.00 33.89 3.61
1680 1857 1.203428 TGGAATCTGAGTCCCCAAGGA 60.203 52.381 20.32 0.00 41.08 3.36
1692 1874 2.571653 TCCCCAAGGACTACATTCACAG 59.428 50.000 0.00 0.00 37.19 3.66
1694 1876 3.338249 CCCAAGGACTACATTCACAGTG 58.662 50.000 0.00 0.00 0.00 3.66
1702 1884 5.182001 GGACTACATTCACAGTGATTGCTTT 59.818 40.000 20.65 8.52 32.63 3.51
1717 1925 4.761235 TTGCTTTCTCTGCAAATCTCAG 57.239 40.909 0.00 0.00 45.81 3.35
1730 1938 4.201990 GCAAATCTCAGCTTAACATCCCAG 60.202 45.833 0.00 0.00 0.00 4.45
1731 1939 2.698855 TCTCAGCTTAACATCCCAGC 57.301 50.000 0.00 0.00 0.00 4.85
1733 1941 0.107703 TCAGCTTAACATCCCAGCCG 60.108 55.000 0.00 0.00 33.73 5.52
1748 1964 0.668535 AGCCGTTTGTTTTCTCTGCC 59.331 50.000 0.00 0.00 0.00 4.85
1754 1973 5.221048 GCCGTTTGTTTTCTCTGCCATATAT 60.221 40.000 0.00 0.00 0.00 0.86
1796 2016 5.365314 AGTCTCCAGTTTCTCAGTTTCTCTT 59.635 40.000 0.00 0.00 0.00 2.85
1803 2023 6.018343 CAGTTTCTCAGTTTCTCTTCCTGTTC 60.018 42.308 0.00 0.00 0.00 3.18
1806 2026 4.061596 CTCAGTTTCTCTTCCTGTTCACC 58.938 47.826 0.00 0.00 0.00 4.02
1816 2036 1.346395 TCCTGTTCACCTAACGCACAT 59.654 47.619 0.00 0.00 41.30 3.21
1819 2039 0.094730 GTTCACCTAACGCACATCGC 59.905 55.000 0.00 0.00 43.23 4.58
1830 2051 0.718343 GCACATCGCTGACTTCTGAC 59.282 55.000 0.00 0.00 37.77 3.51
1833 2054 1.615883 ACATCGCTGACTTCTGACTGT 59.384 47.619 0.00 0.00 0.00 3.55
1874 2097 0.611896 TCCAGTGCCATCTCTCGACA 60.612 55.000 0.00 0.00 0.00 4.35
1903 2126 4.200092 AGTGTCACCTTTTCCAAGAAGAC 58.800 43.478 0.00 0.00 35.66 3.01
1904 2127 3.002348 GTGTCACCTTTTCCAAGAAGACG 59.998 47.826 0.00 0.00 36.85 4.18
1935 2158 3.074412 AGATTAACTGTCCAGCCAAACG 58.926 45.455 0.00 0.00 0.00 3.60
1985 2208 3.085952 AGGATTCAAGGAAAATGGCGA 57.914 42.857 0.00 0.00 0.00 5.54
2053 2281 1.610624 CGGTAACAGCAAGACATGGGT 60.611 52.381 0.00 0.00 0.00 4.51
2075 2303 2.564504 AGAGTGCAAGCAGATACTCACA 59.435 45.455 11.41 0.00 41.44 3.58
2076 2304 3.007290 AGAGTGCAAGCAGATACTCACAA 59.993 43.478 11.41 0.00 41.44 3.33
2099 2327 4.256920 CACTGAATTTCTCCACCGAAGAT 58.743 43.478 0.00 0.00 0.00 2.40
2237 2465 1.735376 GCCTCGGGCTATCTGACGAA 61.735 60.000 7.58 0.00 46.69 3.85
2336 2564 3.314331 CTGGACAGCGACTGGGGT 61.314 66.667 10.80 0.00 35.51 4.95
2520 2763 3.616821 CCGATACTCTGTTTTTGCATCGA 59.383 43.478 0.00 0.00 36.75 3.59
2524 2769 7.398746 CGATACTCTGTTTTTGCATCGATTAA 58.601 34.615 0.00 0.00 36.75 1.40
2561 2838 8.811017 CAGATTTGTATAGATGGATGTACTCCT 58.189 37.037 11.21 0.32 45.21 3.69
2562 2839 9.030452 AGATTTGTATAGATGGATGTACTCCTC 57.970 37.037 11.21 7.39 45.21 3.71
2564 2841 5.254115 TGTATAGATGGATGTACTCCTCCG 58.746 45.833 11.21 0.00 45.21 4.63
2566 2843 0.969894 GATGGATGTACTCCTCCGGG 59.030 60.000 0.00 0.00 45.21 5.73
2567 2844 1.122019 ATGGATGTACTCCTCCGGGC 61.122 60.000 0.00 0.00 45.21 6.13
2568 2845 1.760875 GGATGTACTCCTCCGGGCA 60.761 63.158 0.00 0.00 41.29 5.36
2569 2846 1.742768 GATGTACTCCTCCGGGCAG 59.257 63.158 0.00 0.00 0.00 4.85
2570 2847 1.749334 GATGTACTCCTCCGGGCAGG 61.749 65.000 0.00 1.15 42.97 4.85
2571 2848 2.363925 GTACTCCTCCGGGCAGGT 60.364 66.667 8.95 3.14 41.99 4.00
2572 2849 1.988406 GTACTCCTCCGGGCAGGTT 60.988 63.158 8.95 1.08 41.99 3.50
2573 2850 1.229400 TACTCCTCCGGGCAGGTTT 60.229 57.895 8.95 0.75 41.99 3.27
2574 2851 0.041535 TACTCCTCCGGGCAGGTTTA 59.958 55.000 8.95 0.00 41.99 2.01
2575 2852 0.620700 ACTCCTCCGGGCAGGTTTAT 60.621 55.000 8.95 0.00 41.99 1.40
2576 2853 1.343681 ACTCCTCCGGGCAGGTTTATA 60.344 52.381 8.95 0.00 41.99 0.98
2577 2854 1.978580 CTCCTCCGGGCAGGTTTATAT 59.021 52.381 8.95 0.00 41.99 0.86
2578 2855 1.697432 TCCTCCGGGCAGGTTTATATG 59.303 52.381 8.95 0.00 41.99 1.78
2579 2856 1.420138 CCTCCGGGCAGGTTTATATGT 59.580 52.381 0.00 0.00 41.99 2.29
2580 2857 2.635915 CCTCCGGGCAGGTTTATATGTA 59.364 50.000 0.00 0.00 41.99 2.29
2581 2858 3.071892 CCTCCGGGCAGGTTTATATGTAA 59.928 47.826 0.00 0.00 41.99 2.41
2582 2859 4.445162 CCTCCGGGCAGGTTTATATGTAAA 60.445 45.833 0.00 0.00 41.99 2.01
2583 2860 4.710324 TCCGGGCAGGTTTATATGTAAAG 58.290 43.478 0.00 0.00 41.99 1.85
2584 2861 3.252458 CCGGGCAGGTTTATATGTAAAGC 59.748 47.826 14.25 14.25 44.61 3.51
2696 3194 8.853077 AAAAACATACTTCATGACAGATCTGA 57.147 30.769 29.27 8.23 38.10 3.27
2701 3199 7.873505 ACATACTTCATGACAGATCTGATGATG 59.126 37.037 29.27 26.10 38.10 3.07
2705 3203 5.365619 TCATGACAGATCTGATGATGTTGG 58.634 41.667 29.27 8.24 32.19 3.77
2722 3220 1.017177 TGGTTTCGTGCCGTAGATGC 61.017 55.000 0.00 0.00 0.00 3.91
2734 3232 5.237344 GTGCCGTAGATGCTGATATTTTTCT 59.763 40.000 0.00 0.00 0.00 2.52
2750 3248 6.743575 ATTTTTCTGGATAAACTCGGTCAG 57.256 37.500 0.00 0.00 0.00 3.51
2898 3692 1.799258 GCAGACAAGTTGGGGCACAG 61.799 60.000 7.96 0.00 0.00 3.66
2899 3693 1.529244 AGACAAGTTGGGGCACAGC 60.529 57.895 7.96 0.00 0.00 4.40
2900 3694 2.906897 ACAAGTTGGGGCACAGCG 60.907 61.111 7.96 0.00 35.19 5.18
2901 3695 4.347453 CAAGTTGGGGCACAGCGC 62.347 66.667 0.00 0.00 40.84 5.92
2910 3704 4.731503 GCACAGCGCGCAGACAAG 62.732 66.667 35.10 18.01 0.00 3.16
2911 3705 3.341043 CACAGCGCGCAGACAAGT 61.341 61.111 35.10 17.69 0.00 3.16
2912 3706 2.588877 ACAGCGCGCAGACAAGTT 60.589 55.556 35.10 6.63 0.00 2.66
2913 3707 2.127496 CAGCGCGCAGACAAGTTG 60.127 61.111 35.10 16.38 0.00 3.16
2914 3708 3.349006 AGCGCGCAGACAAGTTGG 61.349 61.111 35.10 0.00 0.00 3.77
2915 3709 4.389576 GCGCGCAGACAAGTTGGG 62.390 66.667 29.10 0.00 0.00 4.12
2916 3710 3.726517 CGCGCAGACAAGTTGGGG 61.727 66.667 8.75 0.00 0.00 4.96
2917 3711 4.043200 GCGCAGACAAGTTGGGGC 62.043 66.667 0.30 5.90 0.00 5.80
2918 3712 2.594303 CGCAGACAAGTTGGGGCA 60.594 61.111 7.96 0.00 0.00 5.36
2919 3713 2.908073 CGCAGACAAGTTGGGGCAC 61.908 63.158 7.96 0.00 0.00 5.01
2920 3714 1.827789 GCAGACAAGTTGGGGCACA 60.828 57.895 7.96 0.00 0.00 4.57
2921 3715 1.799258 GCAGACAAGTTGGGGCACAG 61.799 60.000 7.96 0.00 0.00 3.66
3026 3847 1.064654 GCTCCGTGCCATGATTCTTTC 59.935 52.381 0.00 0.00 35.15 2.62
3034 3855 2.286654 GCCATGATTCTTTCGTAGCTGC 60.287 50.000 0.00 0.00 0.00 5.25
3078 3899 3.788766 GACGCGAACGGCTGCATT 61.789 61.111 15.93 0.00 46.72 3.56
3089 3912 2.170607 ACGGCTGCATTACTAGGACATT 59.829 45.455 0.50 0.00 0.00 2.71
3090 3913 2.802816 CGGCTGCATTACTAGGACATTC 59.197 50.000 0.50 0.00 0.00 2.67
3118 3941 2.781595 GAACATGCTCGACACCGGGT 62.782 60.000 6.32 0.00 38.83 5.28
3142 3994 0.039074 ACTCAACTCGCGGTCTCTTG 60.039 55.000 6.13 1.05 0.00 3.02
3174 4028 4.900635 AGCACACAAGTTTAGAAACCAG 57.099 40.909 1.52 0.00 39.71 4.00
3227 4083 3.456280 TGAAATGAAAAGCAGCACAACC 58.544 40.909 0.00 0.00 0.00 3.77
3228 4084 2.531522 AATGAAAAGCAGCACAACCC 57.468 45.000 0.00 0.00 0.00 4.11
3310 4186 7.230913 AGCATCCATGATTTCTATTTCAAGAGG 59.769 37.037 0.00 0.00 0.00 3.69
3322 4198 9.793259 TTCTATTTCAAGAGGTTGACTTGTTAT 57.207 29.630 0.00 0.00 42.60 1.89
3325 4201 4.713553 TCAAGAGGTTGACTTGTTATGCA 58.286 39.130 0.00 0.00 43.30 3.96
3416 4292 5.390885 CGACCATAAGAACCAGACATTTGTG 60.391 44.000 0.00 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.068083 CATCGTGGTCAGGATCCGG 59.932 63.158 5.98 5.68 34.09 5.14
1 2 1.592669 GCATCGTGGTCAGGATCCG 60.593 63.158 5.98 1.36 34.09 4.18
2 3 1.592669 CGCATCGTGGTCAGGATCC 60.593 63.158 2.48 2.48 34.09 3.36
3 4 2.240500 GCGCATCGTGGTCAGGATC 61.241 63.158 0.30 0.00 34.09 3.36
4 5 2.202932 GCGCATCGTGGTCAGGAT 60.203 61.111 0.30 0.86 36.47 3.24
5 6 3.381983 AGCGCATCGTGGTCAGGA 61.382 61.111 11.47 0.00 0.00 3.86
6 7 3.190849 CAGCGCATCGTGGTCAGG 61.191 66.667 11.47 0.00 0.00 3.86
7 8 3.190849 CCAGCGCATCGTGGTCAG 61.191 66.667 11.47 0.00 0.00 3.51
8 9 4.002506 ACCAGCGCATCGTGGTCA 62.003 61.111 12.90 0.00 44.07 4.02
9 10 3.490759 CACCAGCGCATCGTGGTC 61.491 66.667 15.52 0.00 44.07 4.02
12 13 3.792047 CACCACCAGCGCATCGTG 61.792 66.667 11.47 12.37 0.00 4.35
14 15 4.758251 TCCACCACCAGCGCATCG 62.758 66.667 11.47 0.00 0.00 3.84
15 16 3.127533 GTCCACCACCAGCGCATC 61.128 66.667 11.47 0.00 0.00 3.91
18 19 2.845752 TTATCGTCCACCACCAGCGC 62.846 60.000 0.00 0.00 0.00 5.92
19 20 1.082117 GTTATCGTCCACCACCAGCG 61.082 60.000 0.00 0.00 0.00 5.18
20 21 0.249398 AGTTATCGTCCACCACCAGC 59.751 55.000 0.00 0.00 0.00 4.85
21 22 2.758979 ACTAGTTATCGTCCACCACCAG 59.241 50.000 0.00 0.00 0.00 4.00
22 23 2.756760 GACTAGTTATCGTCCACCACCA 59.243 50.000 0.00 0.00 0.00 4.17
23 24 3.022406 AGACTAGTTATCGTCCACCACC 58.978 50.000 0.00 0.00 0.00 4.61
24 25 4.260538 CGTAGACTAGTTATCGTCCACCAC 60.261 50.000 0.00 0.00 0.00 4.16
25 26 3.873361 CGTAGACTAGTTATCGTCCACCA 59.127 47.826 0.00 0.00 0.00 4.17
26 27 3.249559 CCGTAGACTAGTTATCGTCCACC 59.750 52.174 0.00 0.00 0.00 4.61
27 28 3.249559 CCCGTAGACTAGTTATCGTCCAC 59.750 52.174 0.00 0.00 0.00 4.02
28 29 3.470709 CCCGTAGACTAGTTATCGTCCA 58.529 50.000 0.00 0.00 0.00 4.02
29 30 2.225255 GCCCGTAGACTAGTTATCGTCC 59.775 54.545 0.00 0.00 0.00 4.79
30 31 2.225255 GGCCCGTAGACTAGTTATCGTC 59.775 54.545 0.00 0.00 0.00 4.20
31 32 2.158696 AGGCCCGTAGACTAGTTATCGT 60.159 50.000 0.00 0.00 0.00 3.73
32 33 2.502295 AGGCCCGTAGACTAGTTATCG 58.498 52.381 0.00 2.31 0.00 2.92
33 34 3.887716 TCAAGGCCCGTAGACTAGTTATC 59.112 47.826 0.00 0.00 0.00 1.75
34 35 3.907221 TCAAGGCCCGTAGACTAGTTAT 58.093 45.455 0.00 0.00 0.00 1.89
35 36 3.370840 TCAAGGCCCGTAGACTAGTTA 57.629 47.619 0.00 0.00 0.00 2.24
36 37 2.226962 TCAAGGCCCGTAGACTAGTT 57.773 50.000 0.00 0.00 0.00 2.24
37 38 2.226962 TTCAAGGCCCGTAGACTAGT 57.773 50.000 0.00 0.00 0.00 2.57
38 39 2.734492 CGTTTCAAGGCCCGTAGACTAG 60.734 54.545 0.00 0.00 0.00 2.57
39 40 1.203052 CGTTTCAAGGCCCGTAGACTA 59.797 52.381 0.00 0.00 0.00 2.59
40 41 0.037605 CGTTTCAAGGCCCGTAGACT 60.038 55.000 0.00 0.00 0.00 3.24
41 42 1.632948 GCGTTTCAAGGCCCGTAGAC 61.633 60.000 0.00 0.00 33.94 2.59
42 43 1.375013 GCGTTTCAAGGCCCGTAGA 60.375 57.895 0.00 0.00 33.94 2.59
43 44 3.174788 GCGTTTCAAGGCCCGTAG 58.825 61.111 0.00 0.00 33.94 3.51
49 50 0.667184 CAATGGTGGCGTTTCAAGGC 60.667 55.000 0.00 0.00 38.96 4.35
50 51 0.038343 CCAATGGTGGCGTTTCAAGG 60.038 55.000 0.00 0.00 38.35 3.61
51 52 3.495124 CCAATGGTGGCGTTTCAAG 57.505 52.632 0.00 0.00 38.35 3.02
73 74 1.309499 TAAATCAACCTTGCCCGCGG 61.309 55.000 21.04 21.04 0.00 6.46
74 75 0.179174 GTAAATCAACCTTGCCCGCG 60.179 55.000 0.00 0.00 0.00 6.46
75 76 0.172578 GGTAAATCAACCTTGCCCGC 59.827 55.000 0.00 0.00 36.53 6.13
76 77 0.815095 GGGTAAATCAACCTTGCCCG 59.185 55.000 0.00 0.00 38.69 6.13
77 78 1.191535 GGGGTAAATCAACCTTGCCC 58.808 55.000 0.46 0.46 45.35 5.36
78 79 1.548719 GTGGGGTAAATCAACCTTGCC 59.451 52.381 0.00 0.00 39.65 4.52
79 80 1.548719 GGTGGGGTAAATCAACCTTGC 59.451 52.381 0.00 0.00 39.65 4.01
80 81 2.176045 GGGTGGGGTAAATCAACCTTG 58.824 52.381 0.00 0.00 37.74 3.61
81 82 1.078159 GGGGTGGGGTAAATCAACCTT 59.922 52.381 0.00 0.00 40.45 3.50
82 83 0.708209 GGGGTGGGGTAAATCAACCT 59.292 55.000 0.00 0.00 40.45 3.50
83 84 0.324923 GGGGGTGGGGTAAATCAACC 60.325 60.000 0.00 0.00 39.91 3.77
84 85 3.293199 GGGGGTGGGGTAAATCAAC 57.707 57.895 0.00 0.00 0.00 3.18
99 100 1.299976 GAGTACAAGGTGCTGGGGG 59.700 63.158 0.00 0.00 0.00 5.40
100 101 0.400213 TTGAGTACAAGGTGCTGGGG 59.600 55.000 0.00 0.00 0.00 4.96
101 102 2.270352 TTTGAGTACAAGGTGCTGGG 57.730 50.000 0.00 0.00 37.32 4.45
102 103 3.820467 TGATTTTGAGTACAAGGTGCTGG 59.180 43.478 0.00 0.00 37.32 4.85
103 104 4.320494 GGTGATTTTGAGTACAAGGTGCTG 60.320 45.833 0.00 0.00 37.32 4.41
104 105 3.821033 GGTGATTTTGAGTACAAGGTGCT 59.179 43.478 0.00 0.00 37.32 4.40
105 106 3.364964 CGGTGATTTTGAGTACAAGGTGC 60.365 47.826 0.00 0.00 37.32 5.01
106 107 3.813166 ACGGTGATTTTGAGTACAAGGTG 59.187 43.478 0.00 0.00 37.32 4.00
107 108 4.081322 ACGGTGATTTTGAGTACAAGGT 57.919 40.909 0.00 0.00 37.32 3.50
108 109 4.090930 CGTACGGTGATTTTGAGTACAAGG 59.909 45.833 7.57 0.00 37.96 3.61
109 110 4.919168 TCGTACGGTGATTTTGAGTACAAG 59.081 41.667 16.52 0.00 37.96 3.16
110 111 4.869215 TCGTACGGTGATTTTGAGTACAA 58.131 39.130 16.52 0.00 37.96 2.41
111 112 4.502171 TCGTACGGTGATTTTGAGTACA 57.498 40.909 16.52 0.00 37.96 2.90
112 113 4.090498 GGTTCGTACGGTGATTTTGAGTAC 59.910 45.833 16.52 0.00 35.60 2.73
113 114 4.236935 GGTTCGTACGGTGATTTTGAGTA 58.763 43.478 16.52 0.00 0.00 2.59
114 115 3.062042 GGTTCGTACGGTGATTTTGAGT 58.938 45.455 16.52 0.00 0.00 3.41
115 116 2.414138 GGGTTCGTACGGTGATTTTGAG 59.586 50.000 16.52 0.00 0.00 3.02
116 117 2.037511 AGGGTTCGTACGGTGATTTTGA 59.962 45.455 16.52 0.00 0.00 2.69
117 118 2.419667 AGGGTTCGTACGGTGATTTTG 58.580 47.619 16.52 0.00 0.00 2.44
118 119 2.845363 AGGGTTCGTACGGTGATTTT 57.155 45.000 16.52 0.00 0.00 1.82
119 120 3.959535 TTAGGGTTCGTACGGTGATTT 57.040 42.857 16.52 0.08 0.00 2.17
120 121 3.959535 TTTAGGGTTCGTACGGTGATT 57.040 42.857 16.52 1.70 0.00 2.57
121 122 3.959535 TTTTAGGGTTCGTACGGTGAT 57.040 42.857 16.52 0.89 0.00 3.06
122 123 3.368323 GGATTTTAGGGTTCGTACGGTGA 60.368 47.826 16.52 0.00 0.00 4.02
123 124 2.931969 GGATTTTAGGGTTCGTACGGTG 59.068 50.000 16.52 0.00 0.00 4.94
124 125 2.417243 CGGATTTTAGGGTTCGTACGGT 60.417 50.000 16.52 0.00 0.00 4.83
125 126 2.159254 TCGGATTTTAGGGTTCGTACGG 60.159 50.000 16.52 0.00 0.00 4.02
126 127 3.149436 TCGGATTTTAGGGTTCGTACG 57.851 47.619 9.53 9.53 0.00 3.67
127 128 3.246936 GCATCGGATTTTAGGGTTCGTAC 59.753 47.826 0.00 0.00 0.00 3.67
128 129 3.133362 AGCATCGGATTTTAGGGTTCGTA 59.867 43.478 0.00 0.00 0.00 3.43
129 130 2.093128 AGCATCGGATTTTAGGGTTCGT 60.093 45.455 0.00 0.00 0.00 3.85
130 131 2.544267 GAGCATCGGATTTTAGGGTTCG 59.456 50.000 0.00 0.00 0.00 3.95
145 146 1.882623 GGGGATTGGATTTCGAGCATC 59.117 52.381 0.00 0.00 0.00 3.91
146 147 1.496429 AGGGGATTGGATTTCGAGCAT 59.504 47.619 0.00 0.00 0.00 3.79
147 148 0.918983 AGGGGATTGGATTTCGAGCA 59.081 50.000 0.00 0.00 0.00 4.26
148 149 2.879026 GTTAGGGGATTGGATTTCGAGC 59.121 50.000 0.00 0.00 0.00 5.03
149 150 3.477530 GGTTAGGGGATTGGATTTCGAG 58.522 50.000 0.00 0.00 0.00 4.04
150 151 2.158871 CGGTTAGGGGATTGGATTTCGA 60.159 50.000 0.00 0.00 0.00 3.71
151 152 2.218603 CGGTTAGGGGATTGGATTTCG 58.781 52.381 0.00 0.00 0.00 3.46
152 153 3.211865 GACGGTTAGGGGATTGGATTTC 58.788 50.000 0.00 0.00 0.00 2.17
153 154 2.092049 GGACGGTTAGGGGATTGGATTT 60.092 50.000 0.00 0.00 0.00 2.17
154 155 1.493446 GGACGGTTAGGGGATTGGATT 59.507 52.381 0.00 0.00 0.00 3.01
155 156 1.137697 GGACGGTTAGGGGATTGGAT 58.862 55.000 0.00 0.00 0.00 3.41
156 157 1.332144 CGGACGGTTAGGGGATTGGA 61.332 60.000 0.00 0.00 0.00 3.53
157 158 1.145377 CGGACGGTTAGGGGATTGG 59.855 63.158 0.00 0.00 0.00 3.16
158 159 1.145377 CCGGACGGTTAGGGGATTG 59.855 63.158 0.00 0.00 0.00 2.67
159 160 3.638132 CCGGACGGTTAGGGGATT 58.362 61.111 0.00 0.00 0.00 3.01
169 170 3.805971 GGATCAGTTTTAATACCGGACGG 59.194 47.826 9.46 9.56 42.03 4.79
170 171 3.805971 GGGATCAGTTTTAATACCGGACG 59.194 47.826 9.46 0.00 0.00 4.79
171 172 4.132336 GGGGATCAGTTTTAATACCGGAC 58.868 47.826 9.46 0.00 0.00 4.79
172 173 3.781407 TGGGGATCAGTTTTAATACCGGA 59.219 43.478 9.46 0.00 0.00 5.14
173 174 4.159244 TGGGGATCAGTTTTAATACCGG 57.841 45.455 0.00 0.00 0.00 5.28
174 175 4.034742 CGTTGGGGATCAGTTTTAATACCG 59.965 45.833 0.00 0.00 0.00 4.02
175 176 4.201980 GCGTTGGGGATCAGTTTTAATACC 60.202 45.833 0.00 0.00 0.00 2.73
176 177 4.638865 AGCGTTGGGGATCAGTTTTAATAC 59.361 41.667 0.00 0.00 0.00 1.89
177 178 4.850680 AGCGTTGGGGATCAGTTTTAATA 58.149 39.130 0.00 0.00 0.00 0.98
178 179 3.697166 AGCGTTGGGGATCAGTTTTAAT 58.303 40.909 0.00 0.00 0.00 1.40
179 180 3.149005 AGCGTTGGGGATCAGTTTTAA 57.851 42.857 0.00 0.00 0.00 1.52
180 181 2.817258 CAAGCGTTGGGGATCAGTTTTA 59.183 45.455 0.00 0.00 0.00 1.52
181 182 1.613437 CAAGCGTTGGGGATCAGTTTT 59.387 47.619 0.00 0.00 0.00 2.43
182 183 1.202879 TCAAGCGTTGGGGATCAGTTT 60.203 47.619 0.00 0.00 0.00 2.66
183 184 0.400213 TCAAGCGTTGGGGATCAGTT 59.600 50.000 0.00 0.00 0.00 3.16
184 185 0.036010 CTCAAGCGTTGGGGATCAGT 60.036 55.000 0.00 0.00 0.00 3.41
185 186 0.036010 ACTCAAGCGTTGGGGATCAG 60.036 55.000 0.00 0.00 34.70 2.90
186 187 0.036388 GACTCAAGCGTTGGGGATCA 60.036 55.000 0.00 0.00 34.70 2.92
187 188 1.084370 CGACTCAAGCGTTGGGGATC 61.084 60.000 3.28 0.00 34.70 3.36
188 189 1.079127 CGACTCAAGCGTTGGGGAT 60.079 57.895 3.28 0.00 34.70 3.85
189 190 1.541310 ATCGACTCAAGCGTTGGGGA 61.541 55.000 0.00 0.00 34.70 4.81
190 191 0.673644 AATCGACTCAAGCGTTGGGG 60.674 55.000 0.00 0.00 34.70 4.96
191 192 0.443869 CAATCGACTCAAGCGTTGGG 59.556 55.000 0.00 0.00 37.11 4.12
192 193 0.179215 GCAATCGACTCAAGCGTTGG 60.179 55.000 0.00 0.00 0.00 3.77
193 194 0.517132 CGCAATCGACTCAAGCGTTG 60.517 55.000 9.63 0.00 43.08 4.10
194 195 1.626654 CCGCAATCGACTCAAGCGTT 61.627 55.000 14.58 0.00 46.26 4.84
195 196 2.094659 CCGCAATCGACTCAAGCGT 61.095 57.895 14.58 0.00 46.26 5.07
197 198 0.796312 TTTCCGCAATCGACTCAAGC 59.204 50.000 0.00 0.00 38.10 4.01
198 199 2.030946 GGATTTCCGCAATCGACTCAAG 59.969 50.000 0.00 0.00 42.27 3.02
199 200 2.006888 GGATTTCCGCAATCGACTCAA 58.993 47.619 0.00 0.00 42.27 3.02
200 201 1.066502 TGGATTTCCGCAATCGACTCA 60.067 47.619 0.00 0.00 42.27 3.41
201 202 1.651987 TGGATTTCCGCAATCGACTC 58.348 50.000 0.00 0.00 42.27 3.36
202 203 2.107950 TTGGATTTCCGCAATCGACT 57.892 45.000 0.00 0.00 42.27 4.18
203 204 2.614057 AGATTGGATTTCCGCAATCGAC 59.386 45.455 0.00 0.00 42.27 4.20
204 205 2.917933 AGATTGGATTTCCGCAATCGA 58.082 42.857 0.00 0.00 42.27 3.59
205 206 4.811555 TTAGATTGGATTTCCGCAATCG 57.188 40.909 0.00 0.00 42.27 3.34
206 207 5.455525 CGTTTTAGATTGGATTTCCGCAATC 59.544 40.000 0.00 0.00 40.79 2.67
207 208 5.339990 CGTTTTAGATTGGATTTCCGCAAT 58.660 37.500 0.00 0.00 39.43 3.56
208 209 4.728534 CGTTTTAGATTGGATTTCCGCAA 58.271 39.130 0.00 0.00 39.43 4.85
209 210 3.426963 GCGTTTTAGATTGGATTTCCGCA 60.427 43.478 0.00 0.00 39.43 5.69
210 211 3.105937 GCGTTTTAGATTGGATTTCCGC 58.894 45.455 0.00 0.00 39.43 5.54
211 212 3.127895 TGGCGTTTTAGATTGGATTTCCG 59.872 43.478 0.00 0.00 39.43 4.30
212 213 4.712122 TGGCGTTTTAGATTGGATTTCC 57.288 40.909 0.00 0.00 0.00 3.13
213 214 5.455525 CGATTGGCGTTTTAGATTGGATTTC 59.544 40.000 0.00 0.00 34.64 2.17
214 215 5.124776 TCGATTGGCGTTTTAGATTGGATTT 59.875 36.000 0.00 0.00 41.80 2.17
215 216 4.638421 TCGATTGGCGTTTTAGATTGGATT 59.362 37.500 0.00 0.00 41.80 3.01
216 217 4.196193 TCGATTGGCGTTTTAGATTGGAT 58.804 39.130 0.00 0.00 41.80 3.41
217 218 3.601435 TCGATTGGCGTTTTAGATTGGA 58.399 40.909 0.00 0.00 41.80 3.53
218 219 4.349663 TTCGATTGGCGTTTTAGATTGG 57.650 40.909 0.00 0.00 41.80 3.16
219 220 6.482835 TGTATTCGATTGGCGTTTTAGATTG 58.517 36.000 0.00 0.00 41.80 2.67
220 221 6.238374 CCTGTATTCGATTGGCGTTTTAGATT 60.238 38.462 0.00 0.00 41.80 2.40
221 222 5.236478 CCTGTATTCGATTGGCGTTTTAGAT 59.764 40.000 0.00 0.00 41.80 1.98
222 223 4.569162 CCTGTATTCGATTGGCGTTTTAGA 59.431 41.667 0.00 0.00 41.80 2.10
223 224 4.569162 TCCTGTATTCGATTGGCGTTTTAG 59.431 41.667 0.00 0.00 41.80 1.85
224 225 4.505808 TCCTGTATTCGATTGGCGTTTTA 58.494 39.130 0.00 0.00 41.80 1.52
225 226 3.340034 TCCTGTATTCGATTGGCGTTTT 58.660 40.909 0.00 0.00 41.80 2.43
226 227 2.980568 TCCTGTATTCGATTGGCGTTT 58.019 42.857 0.00 0.00 41.80 3.60
227 228 2.684001 TCCTGTATTCGATTGGCGTT 57.316 45.000 0.00 0.00 41.80 4.84
228 229 2.684001 TTCCTGTATTCGATTGGCGT 57.316 45.000 0.00 0.00 41.80 5.68
229 230 3.559655 TGATTTCCTGTATTCGATTGGCG 59.440 43.478 0.00 0.00 42.69 5.69
230 231 5.499139 TTGATTTCCTGTATTCGATTGGC 57.501 39.130 0.00 0.00 0.00 4.52
231 232 8.243426 TCTTTTTGATTTCCTGTATTCGATTGG 58.757 33.333 0.00 0.00 0.00 3.16
232 233 9.793252 ATCTTTTTGATTTCCTGTATTCGATTG 57.207 29.630 0.00 0.00 29.59 2.67
233 234 9.793252 CATCTTTTTGATTTCCTGTATTCGATT 57.207 29.630 0.00 0.00 32.05 3.34
234 235 8.408601 CCATCTTTTTGATTTCCTGTATTCGAT 58.591 33.333 0.00 0.00 32.05 3.59
235 236 7.148086 CCCATCTTTTTGATTTCCTGTATTCGA 60.148 37.037 0.00 0.00 32.05 3.71
236 237 6.974622 CCCATCTTTTTGATTTCCTGTATTCG 59.025 38.462 0.00 0.00 32.05 3.34
237 238 7.976175 GTCCCATCTTTTTGATTTCCTGTATTC 59.024 37.037 0.00 0.00 32.05 1.75
238 239 7.454380 TGTCCCATCTTTTTGATTTCCTGTATT 59.546 33.333 0.00 0.00 32.05 1.89
239 240 6.953520 TGTCCCATCTTTTTGATTTCCTGTAT 59.046 34.615 0.00 0.00 32.05 2.29
240 241 6.310941 TGTCCCATCTTTTTGATTTCCTGTA 58.689 36.000 0.00 0.00 32.05 2.74
241 242 5.147032 TGTCCCATCTTTTTGATTTCCTGT 58.853 37.500 0.00 0.00 32.05 4.00
242 243 5.726980 TGTCCCATCTTTTTGATTTCCTG 57.273 39.130 0.00 0.00 32.05 3.86
243 244 6.745794 TTTGTCCCATCTTTTTGATTTCCT 57.254 33.333 0.00 0.00 32.05 3.36
244 245 6.372381 CCATTTGTCCCATCTTTTTGATTTCC 59.628 38.462 0.00 0.00 32.05 3.13
245 246 6.128200 GCCATTTGTCCCATCTTTTTGATTTC 60.128 38.462 0.00 0.00 32.05 2.17
246 247 5.706833 GCCATTTGTCCCATCTTTTTGATTT 59.293 36.000 0.00 0.00 32.05 2.17
247 248 5.013391 AGCCATTTGTCCCATCTTTTTGATT 59.987 36.000 0.00 0.00 32.05 2.57
248 249 4.533311 AGCCATTTGTCCCATCTTTTTGAT 59.467 37.500 0.00 0.00 35.40 2.57
249 250 3.903090 AGCCATTTGTCCCATCTTTTTGA 59.097 39.130 0.00 0.00 0.00 2.69
250 251 4.276058 AGCCATTTGTCCCATCTTTTTG 57.724 40.909 0.00 0.00 0.00 2.44
251 252 4.980339 AAGCCATTTGTCCCATCTTTTT 57.020 36.364 0.00 0.00 0.00 1.94
252 253 4.222810 GGTAAGCCATTTGTCCCATCTTTT 59.777 41.667 0.00 0.00 34.09 2.27
253 254 3.769300 GGTAAGCCATTTGTCCCATCTTT 59.231 43.478 0.00 0.00 34.09 2.52
254 255 3.365472 GGTAAGCCATTTGTCCCATCTT 58.635 45.455 0.00 0.00 34.09 2.40
255 256 2.683742 CGGTAAGCCATTTGTCCCATCT 60.684 50.000 0.00 0.00 34.09 2.90
256 257 1.676006 CGGTAAGCCATTTGTCCCATC 59.324 52.381 0.00 0.00 34.09 3.51
257 258 1.762708 CGGTAAGCCATTTGTCCCAT 58.237 50.000 0.00 0.00 34.09 4.00
258 259 0.963355 GCGGTAAGCCATTTGTCCCA 60.963 55.000 0.00 0.00 40.81 4.37
259 260 1.807226 GCGGTAAGCCATTTGTCCC 59.193 57.895 0.00 0.00 40.81 4.46
276 277 2.490217 CAGCAGCTCAGCAATGGC 59.510 61.111 0.00 0.00 41.61 4.40
277 278 2.490217 GCAGCAGCTCAGCAATGG 59.510 61.111 0.00 0.00 37.91 3.16
278 279 2.490217 GGCAGCAGCTCAGCAATG 59.510 61.111 0.00 0.00 41.70 2.82
279 280 3.132139 CGGCAGCAGCTCAGCAAT 61.132 61.111 0.00 0.00 41.70 3.56
299 300 3.414700 CACCGTCTTCAGCACCGC 61.415 66.667 0.00 0.00 0.00 5.68
300 301 1.078759 GATCACCGTCTTCAGCACCG 61.079 60.000 0.00 0.00 0.00 4.94
301 302 1.078759 CGATCACCGTCTTCAGCACC 61.079 60.000 0.00 0.00 0.00 5.01
302 303 1.687494 GCGATCACCGTCTTCAGCAC 61.687 60.000 0.00 0.00 41.15 4.40
303 304 1.446099 GCGATCACCGTCTTCAGCA 60.446 57.895 0.00 0.00 41.15 4.41
304 305 2.167861 GGCGATCACCGTCTTCAGC 61.168 63.158 0.00 0.00 40.28 4.26
305 306 4.094684 GGCGATCACCGTCTTCAG 57.905 61.111 0.00 0.00 40.28 3.02
313 314 4.430765 ACACCGACGGCGATCACC 62.431 66.667 15.16 0.00 40.82 4.02
314 315 3.179265 CACACCGACGGCGATCAC 61.179 66.667 15.16 0.69 40.82 3.06
315 316 3.336715 CTCACACCGACGGCGATCA 62.337 63.158 15.16 0.00 40.82 2.92
316 317 2.579787 CTCACACCGACGGCGATC 60.580 66.667 15.16 6.66 40.82 3.69
317 318 3.052620 CTCTCACACCGACGGCGAT 62.053 63.158 15.16 0.00 40.82 4.58
318 319 3.733960 CTCTCACACCGACGGCGA 61.734 66.667 15.16 7.45 40.82 5.54
319 320 4.039357 ACTCTCACACCGACGGCG 62.039 66.667 15.39 1.94 37.24 6.46
320 321 2.430921 CACTCTCACACCGACGGC 60.431 66.667 15.39 0.00 0.00 5.68
321 322 2.258591 CCACTCTCACACCGACGG 59.741 66.667 13.61 13.61 0.00 4.79
322 323 2.258591 CCCACTCTCACACCGACG 59.741 66.667 0.00 0.00 0.00 5.12
323 324 1.258445 ATCCCCACTCTCACACCGAC 61.258 60.000 0.00 0.00 0.00 4.79
324 325 0.333652 TATCCCCACTCTCACACCGA 59.666 55.000 0.00 0.00 0.00 4.69
325 326 0.747255 CTATCCCCACTCTCACACCG 59.253 60.000 0.00 0.00 0.00 4.94
326 327 1.123928 CCTATCCCCACTCTCACACC 58.876 60.000 0.00 0.00 0.00 4.16
327 328 1.123928 CCCTATCCCCACTCTCACAC 58.876 60.000 0.00 0.00 0.00 3.82
328 329 0.031111 CCCCTATCCCCACTCTCACA 60.031 60.000 0.00 0.00 0.00 3.58
329 330 0.264955 TCCCCTATCCCCACTCTCAC 59.735 60.000 0.00 0.00 0.00 3.51
330 331 0.563173 CTCCCCTATCCCCACTCTCA 59.437 60.000 0.00 0.00 0.00 3.27
331 332 0.861155 TCTCCCCTATCCCCACTCTC 59.139 60.000 0.00 0.00 0.00 3.20
332 333 0.863956 CTCTCCCCTATCCCCACTCT 59.136 60.000 0.00 0.00 0.00 3.24
333 334 0.861155 TCTCTCCCCTATCCCCACTC 59.139 60.000 0.00 0.00 0.00 3.51
334 335 0.863956 CTCTCTCCCCTATCCCCACT 59.136 60.000 0.00 0.00 0.00 4.00
335 336 0.861155 TCTCTCTCCCCTATCCCCAC 59.139 60.000 0.00 0.00 0.00 4.61
336 337 1.162505 CTCTCTCTCCCCTATCCCCA 58.837 60.000 0.00 0.00 0.00 4.96
337 338 0.252057 GCTCTCTCTCCCCTATCCCC 60.252 65.000 0.00 0.00 0.00 4.81
338 339 0.610785 CGCTCTCTCTCCCCTATCCC 60.611 65.000 0.00 0.00 0.00 3.85
339 340 0.610785 CCGCTCTCTCTCCCCTATCC 60.611 65.000 0.00 0.00 0.00 2.59
340 341 0.111639 ACCGCTCTCTCTCCCCTATC 59.888 60.000 0.00 0.00 0.00 2.08
341 342 0.178975 CACCGCTCTCTCTCCCCTAT 60.179 60.000 0.00 0.00 0.00 2.57
342 343 1.227664 CACCGCTCTCTCTCCCCTA 59.772 63.158 0.00 0.00 0.00 3.53
343 344 2.043450 CACCGCTCTCTCTCCCCT 60.043 66.667 0.00 0.00 0.00 4.79
344 345 2.043852 TCACCGCTCTCTCTCCCC 60.044 66.667 0.00 0.00 0.00 4.81
345 346 2.124693 CCTCACCGCTCTCTCTCCC 61.125 68.421 0.00 0.00 0.00 4.30
346 347 2.124693 CCCTCACCGCTCTCTCTCC 61.125 68.421 0.00 0.00 0.00 3.71
347 348 0.107116 TACCCTCACCGCTCTCTCTC 60.107 60.000 0.00 0.00 0.00 3.20
348 349 0.331954 TTACCCTCACCGCTCTCTCT 59.668 55.000 0.00 0.00 0.00 3.10
349 350 1.404843 ATTACCCTCACCGCTCTCTC 58.595 55.000 0.00 0.00 0.00 3.20
350 351 1.867363 AATTACCCTCACCGCTCTCT 58.133 50.000 0.00 0.00 0.00 3.10
351 352 2.693267 AAATTACCCTCACCGCTCTC 57.307 50.000 0.00 0.00 0.00 3.20
352 353 2.159142 CGTAAATTACCCTCACCGCTCT 60.159 50.000 0.00 0.00 0.00 4.09
353 354 2.199236 CGTAAATTACCCTCACCGCTC 58.801 52.381 0.00 0.00 0.00 5.03
354 355 1.741394 GCGTAAATTACCCTCACCGCT 60.741 52.381 0.00 0.00 37.14 5.52
355 356 0.654160 GCGTAAATTACCCTCACCGC 59.346 55.000 0.00 0.00 0.00 5.68
356 357 1.292992 GGCGTAAATTACCCTCACCG 58.707 55.000 0.00 0.00 0.00 4.94
357 358 1.292992 CGGCGTAAATTACCCTCACC 58.707 55.000 0.00 0.00 0.00 4.02
358 359 0.654160 GCGGCGTAAATTACCCTCAC 59.346 55.000 9.37 0.00 0.00 3.51
359 360 0.249676 TGCGGCGTAAATTACCCTCA 59.750 50.000 9.37 0.00 0.00 3.86
360 361 0.935196 CTGCGGCGTAAATTACCCTC 59.065 55.000 9.37 0.00 0.00 4.30
361 362 0.251073 ACTGCGGCGTAAATTACCCT 59.749 50.000 9.37 0.00 0.00 4.34
362 363 1.089112 AACTGCGGCGTAAATTACCC 58.911 50.000 9.37 0.00 0.00 3.69
363 364 2.905959 AAACTGCGGCGTAAATTACC 57.094 45.000 9.37 0.00 0.00 2.85
364 365 3.359580 CACAAAACTGCGGCGTAAATTAC 59.640 43.478 9.37 0.00 0.00 1.89
365 366 3.250280 TCACAAAACTGCGGCGTAAATTA 59.750 39.130 9.37 0.00 0.00 1.40
366 367 2.033550 TCACAAAACTGCGGCGTAAATT 59.966 40.909 9.37 0.00 0.00 1.82
367 368 1.604755 TCACAAAACTGCGGCGTAAAT 59.395 42.857 9.37 0.00 0.00 1.40
368 369 1.015109 TCACAAAACTGCGGCGTAAA 58.985 45.000 9.37 0.00 0.00 2.01
369 370 1.015109 TTCACAAAACTGCGGCGTAA 58.985 45.000 9.37 0.00 0.00 3.18
370 371 1.015109 TTTCACAAAACTGCGGCGTA 58.985 45.000 9.37 1.99 0.00 4.42
371 372 0.524604 GTTTCACAAAACTGCGGCGT 60.525 50.000 9.37 0.00 41.32 5.68
372 373 0.524392 TGTTTCACAAAACTGCGGCG 60.524 50.000 0.51 0.51 44.23 6.46
373 374 1.323235 GTTGTTTCACAAAACTGCGGC 59.677 47.619 0.00 0.00 44.23 6.53
374 375 2.851824 GAGTTGTTTCACAAAACTGCGG 59.148 45.455 0.00 0.00 44.23 5.69
375 376 2.525891 CGAGTTGTTTCACAAAACTGCG 59.474 45.455 3.06 0.00 44.23 5.18
376 377 3.542310 GTCGAGTTGTTTCACAAAACTGC 59.458 43.478 0.00 0.00 44.23 4.40
377 378 3.778718 CGTCGAGTTGTTTCACAAAACTG 59.221 43.478 0.00 0.00 44.23 3.16
378 379 3.726782 GCGTCGAGTTGTTTCACAAAACT 60.727 43.478 0.00 0.00 44.23 2.66
379 380 2.524699 GCGTCGAGTTGTTTCACAAAAC 59.475 45.455 0.00 0.00 40.15 2.43
380 381 2.476519 GGCGTCGAGTTGTTTCACAAAA 60.477 45.455 0.00 0.00 40.15 2.44
381 382 1.062880 GGCGTCGAGTTGTTTCACAAA 59.937 47.619 0.00 0.00 40.15 2.83
382 383 0.653636 GGCGTCGAGTTGTTTCACAA 59.346 50.000 0.00 0.00 35.42 3.33
383 384 0.179094 AGGCGTCGAGTTGTTTCACA 60.179 50.000 0.00 0.00 0.00 3.58
384 385 0.507358 GAGGCGTCGAGTTGTTTCAC 59.493 55.000 0.00 0.00 0.00 3.18
385 386 2.895039 GAGGCGTCGAGTTGTTTCA 58.105 52.632 0.00 0.00 0.00 2.69
396 397 4.838486 CGGCAGTCTCGAGGCGTC 62.838 72.222 12.12 7.38 46.92 5.19
399 400 4.838486 CGACGGCAGTCTCGAGGC 62.838 72.222 9.58 9.58 44.93 4.70
400 401 4.838486 GCGACGGCAGTCTCGAGG 62.838 72.222 13.56 0.00 44.93 4.63
401 402 4.838486 GGCGACGGCAGTCTCGAG 62.838 72.222 17.49 5.93 44.93 4.04
429 430 3.567797 GCCCGAGCGATGCAACTC 61.568 66.667 0.00 0.00 0.00 3.01
442 443 1.753368 TTTTTCCAAAGCCAGGCCCG 61.753 55.000 8.22 0.00 0.00 6.13
445 446 0.599991 CCGTTTTTCCAAAGCCAGGC 60.600 55.000 1.84 1.84 0.00 4.85
469 473 2.022240 CTAGCTCAGAGGGAACGGGC 62.022 65.000 0.00 0.00 0.00 6.13
481 485 1.687146 CACCTCTGGGCCTAGCTCA 60.687 63.158 12.10 0.00 36.30 4.26
486 490 1.906574 CTAAACACACCTCTGGGCCTA 59.093 52.381 4.53 0.00 35.63 3.93
494 498 6.021596 CGCATCAAAATACTAAACACACCTC 58.978 40.000 0.00 0.00 0.00 3.85
500 504 9.991388 GTTTATACCGCATCAAAATACTAAACA 57.009 29.630 0.00 0.00 0.00 2.83
501 505 9.991388 TGTTTATACCGCATCAAAATACTAAAC 57.009 29.630 0.00 0.00 0.00 2.01
517 536 6.978343 TGACCTCTTTGATTGTTTATACCG 57.022 37.500 0.00 0.00 0.00 4.02
524 543 6.015095 GGGAGAATTTGACCTCTTTGATTGTT 60.015 38.462 0.00 0.00 0.00 2.83
525 544 5.478332 GGGAGAATTTGACCTCTTTGATTGT 59.522 40.000 0.00 0.00 0.00 2.71
530 549 2.749621 CGGGGAGAATTTGACCTCTTTG 59.250 50.000 0.00 0.00 0.00 2.77
534 553 0.035439 TGCGGGGAGAATTTGACCTC 60.035 55.000 0.00 0.00 0.00 3.85
539 558 0.748005 ATCCGTGCGGGGAGAATTTG 60.748 55.000 10.94 0.00 40.02 2.32
547 566 4.096003 AACCAGATCCGTGCGGGG 62.096 66.667 10.94 6.45 36.01 5.73
548 567 2.819595 CAACCAGATCCGTGCGGG 60.820 66.667 10.94 0.00 35.59 6.13
549 568 2.819595 CCAACCAGATCCGTGCGG 60.820 66.667 3.94 3.94 0.00 5.69
550 569 2.819595 CCCAACCAGATCCGTGCG 60.820 66.667 0.00 0.00 0.00 5.34
551 570 2.040544 CACCCAACCAGATCCGTGC 61.041 63.158 0.00 0.00 0.00 5.34
554 573 0.464373 CATCCACCCAACCAGATCCG 60.464 60.000 0.00 0.00 0.00 4.18
556 575 1.097547 CGCATCCACCCAACCAGATC 61.098 60.000 0.00 0.00 0.00 2.75
557 576 1.077501 CGCATCCACCCAACCAGAT 60.078 57.895 0.00 0.00 0.00 2.90
558 577 2.350895 CGCATCCACCCAACCAGA 59.649 61.111 0.00 0.00 0.00 3.86
559 578 2.751436 CCGCATCCACCCAACCAG 60.751 66.667 0.00 0.00 0.00 4.00
560 579 4.358841 CCCGCATCCACCCAACCA 62.359 66.667 0.00 0.00 0.00 3.67
563 582 4.292145 TTGCCCGCATCCACCCAA 62.292 61.111 0.00 0.00 0.00 4.12
567 586 2.568090 CTTGTTGCCCGCATCCAC 59.432 61.111 0.00 0.00 0.00 4.02
577 596 2.225491 TCATTTACTGGACGCTTGTTGC 59.775 45.455 0.00 0.00 38.57 4.17
586 605 1.066430 TCCTGCCGTCATTTACTGGAC 60.066 52.381 0.00 0.00 0.00 4.02
593 628 0.984230 TCCTTCTCCTGCCGTCATTT 59.016 50.000 0.00 0.00 0.00 2.32
594 629 0.984230 TTCCTTCTCCTGCCGTCATT 59.016 50.000 0.00 0.00 0.00 2.57
597 632 1.443802 CTTTTCCTTCTCCTGCCGTC 58.556 55.000 0.00 0.00 0.00 4.79
603 638 0.405973 GGTGCCCTTTTCCTTCTCCT 59.594 55.000 0.00 0.00 0.00 3.69
604 639 0.405973 AGGTGCCCTTTTCCTTCTCC 59.594 55.000 0.00 0.00 0.00 3.71
617 652 1.331756 CTCGTTTGATATGCAGGTGCC 59.668 52.381 0.00 0.00 41.18 5.01
631 669 3.194968 CCACCACACTAGTATCCTCGTTT 59.805 47.826 0.00 0.00 0.00 3.60
639 677 2.170607 GCATCACCCACCACACTAGTAT 59.829 50.000 0.00 0.00 0.00 2.12
671 718 0.664761 TTTGACTGACAGCAAGCAGC 59.335 50.000 1.25 0.00 46.19 5.25
672 719 2.615447 TCTTTTGACTGACAGCAAGCAG 59.385 45.455 1.25 8.03 38.10 4.24
673 720 2.615447 CTCTTTTGACTGACAGCAAGCA 59.385 45.455 1.25 0.00 0.00 3.91
674 721 2.874701 TCTCTTTTGACTGACAGCAAGC 59.125 45.455 1.25 0.00 0.00 4.01
675 722 4.210955 GTCTCTCTTTTGACTGACAGCAAG 59.789 45.833 1.25 0.51 0.00 4.01
676 723 4.122776 GTCTCTCTTTTGACTGACAGCAA 58.877 43.478 1.25 5.35 0.00 3.91
706 753 1.005032 GGCTTCGTTTTGTTTTGCAGC 60.005 47.619 0.00 0.00 0.00 5.25
707 754 2.282290 CAGGCTTCGTTTTGTTTTGCAG 59.718 45.455 0.00 0.00 0.00 4.41
708 755 2.266554 CAGGCTTCGTTTTGTTTTGCA 58.733 42.857 0.00 0.00 0.00 4.08
709 756 2.029124 CACAGGCTTCGTTTTGTTTTGC 59.971 45.455 0.00 0.00 0.00 3.68
710 757 2.602660 CCACAGGCTTCGTTTTGTTTTG 59.397 45.455 0.00 0.00 0.00 2.44
722 769 0.393808 ACGAAACACACCACAGGCTT 60.394 50.000 0.00 0.00 0.00 4.35
723 770 0.393808 AACGAAACACACCACAGGCT 60.394 50.000 0.00 0.00 0.00 4.58
724 771 0.454196 AAACGAAACACACCACAGGC 59.546 50.000 0.00 0.00 0.00 4.85
725 772 1.470890 ACAAACGAAACACACCACAGG 59.529 47.619 0.00 0.00 0.00 4.00
726 773 2.514902 CACAAACGAAACACACCACAG 58.485 47.619 0.00 0.00 0.00 3.66
727 774 1.200252 CCACAAACGAAACACACCACA 59.800 47.619 0.00 0.00 0.00 4.17
728 775 1.200484 ACCACAAACGAAACACACCAC 59.800 47.619 0.00 0.00 0.00 4.16
729 776 1.200252 CACCACAAACGAAACACACCA 59.800 47.619 0.00 0.00 0.00 4.17
730 777 1.468395 CCACCACAAACGAAACACACC 60.468 52.381 0.00 0.00 0.00 4.16
731 778 1.902840 CCACCACAAACGAAACACAC 58.097 50.000 0.00 0.00 0.00 3.82
732 779 0.171455 GCCACCACAAACGAAACACA 59.829 50.000 0.00 0.00 0.00 3.72
733 780 0.454196 AGCCACCACAAACGAAACAC 59.546 50.000 0.00 0.00 0.00 3.32
768 815 4.521062 AGCCAGCCACTCGCGATC 62.521 66.667 10.36 0.00 44.76 3.69
769 816 4.827087 CAGCCAGCCACTCGCGAT 62.827 66.667 10.36 0.00 44.76 4.58
772 819 4.704833 TTCCAGCCAGCCACTCGC 62.705 66.667 0.00 0.00 37.98 5.03
773 820 2.743928 GTTCCAGCCAGCCACTCG 60.744 66.667 0.00 0.00 0.00 4.18
774 821 2.360475 GGTTCCAGCCAGCCACTC 60.360 66.667 0.00 0.00 0.00 3.51
800 849 2.696125 GGGAGATGGCCCTTGGGA 60.696 66.667 10.36 0.00 45.12 4.37
817 866 3.157949 GGGAAGCCGGAGAGGGAG 61.158 72.222 5.05 0.00 41.48 4.30
818 867 4.798682 GGGGAAGCCGGAGAGGGA 62.799 72.222 5.05 0.00 41.48 4.20
828 877 4.678743 GTGGGTGGGTGGGGAAGC 62.679 72.222 0.00 0.00 0.00 3.86
829 878 3.979497 GGTGGGTGGGTGGGGAAG 61.979 72.222 0.00 0.00 0.00 3.46
830 879 4.542627 AGGTGGGTGGGTGGGGAA 62.543 66.667 0.00 0.00 0.00 3.97
831 880 4.995058 GAGGTGGGTGGGTGGGGA 62.995 72.222 0.00 0.00 0.00 4.81
833 882 3.650950 CAGAGGTGGGTGGGTGGG 61.651 72.222 0.00 0.00 0.00 4.61
834 883 4.351054 GCAGAGGTGGGTGGGTGG 62.351 72.222 0.00 0.00 0.00 4.61
835 884 4.351054 GGCAGAGGTGGGTGGGTG 62.351 72.222 0.00 0.00 0.00 4.61
838 887 4.087892 CTCGGCAGAGGTGGGTGG 62.088 72.222 5.89 0.00 40.75 4.61
839 888 2.997315 TCTCGGCAGAGGTGGGTG 60.997 66.667 14.13 0.00 44.47 4.61
840 889 2.997897 GTCTCGGCAGAGGTGGGT 60.998 66.667 14.13 0.00 44.47 4.51
861 910 0.254747 CCGGTCTGACTCTCTCCTCT 59.745 60.000 7.85 0.00 0.00 3.69
862 911 1.381165 GCCGGTCTGACTCTCTCCTC 61.381 65.000 1.90 0.00 0.00 3.71
863 912 1.379309 GCCGGTCTGACTCTCTCCT 60.379 63.158 1.90 0.00 0.00 3.69
864 913 2.419739 GGCCGGTCTGACTCTCTCC 61.420 68.421 1.90 0.00 0.00 3.71
865 914 2.766400 CGGCCGGTCTGACTCTCTC 61.766 68.421 20.10 0.00 0.00 3.20
866 915 2.752238 CGGCCGGTCTGACTCTCT 60.752 66.667 20.10 0.00 0.00 3.10
867 916 2.750637 TCGGCCGGTCTGACTCTC 60.751 66.667 27.83 0.00 0.00 3.20
868 917 2.752238 CTCGGCCGGTCTGACTCT 60.752 66.667 27.83 0.00 0.00 3.24
869 918 3.827898 CCTCGGCCGGTCTGACTC 61.828 72.222 27.83 0.00 0.00 3.36
870 919 4.361971 TCCTCGGCCGGTCTGACT 62.362 66.667 27.83 0.00 0.00 3.41
871 920 3.827898 CTCCTCGGCCGGTCTGAC 61.828 72.222 27.83 0.00 0.00 3.51
900 949 1.071471 CTTGTCTTCCCTGTGGCGT 59.929 57.895 0.00 0.00 0.00 5.68
901 950 0.671781 CTCTTGTCTTCCCTGTGGCG 60.672 60.000 0.00 0.00 0.00 5.69
902 951 0.687354 TCTCTTGTCTTCCCTGTGGC 59.313 55.000 0.00 0.00 0.00 5.01
903 952 2.873649 GCTTCTCTTGTCTTCCCTGTGG 60.874 54.545 0.00 0.00 0.00 4.17
905 954 2.038295 CTGCTTCTCTTGTCTTCCCTGT 59.962 50.000 0.00 0.00 0.00 4.00
906 955 2.301296 TCTGCTTCTCTTGTCTTCCCTG 59.699 50.000 0.00 0.00 0.00 4.45
907 956 2.614259 TCTGCTTCTCTTGTCTTCCCT 58.386 47.619 0.00 0.00 0.00 4.20
908 957 3.333804 CTTCTGCTTCTCTTGTCTTCCC 58.666 50.000 0.00 0.00 0.00 3.97
909 958 2.741517 GCTTCTGCTTCTCTTGTCTTCC 59.258 50.000 0.00 0.00 36.03 3.46
910 959 3.397482 TGCTTCTGCTTCTCTTGTCTTC 58.603 45.455 0.00 0.00 40.48 2.87
911 960 3.070734 TCTGCTTCTGCTTCTCTTGTCTT 59.929 43.478 0.00 0.00 40.48 3.01
923 972 1.673665 CCCACACCTCTGCTTCTGC 60.674 63.158 0.00 0.00 40.20 4.26
924 973 1.002868 CCCCACACCTCTGCTTCTG 60.003 63.158 0.00 0.00 0.00 3.02
952 1011 1.627834 CTGGCTTCTCTTCTTCCCTGT 59.372 52.381 0.00 0.00 0.00 4.00
1012 1072 1.539869 AAGGGGGAGAAGAGCAGCA 60.540 57.895 0.00 0.00 0.00 4.41
1013 1073 1.223211 GAAGGGGGAGAAGAGCAGC 59.777 63.158 0.00 0.00 0.00 5.25
1014 1074 0.620121 AGGAAGGGGGAGAAGAGCAG 60.620 60.000 0.00 0.00 0.00 4.24
1015 1075 0.618968 GAGGAAGGGGGAGAAGAGCA 60.619 60.000 0.00 0.00 0.00 4.26
1016 1076 1.341913 GGAGGAAGGGGGAGAAGAGC 61.342 65.000 0.00 0.00 0.00 4.09
1017 1077 0.692756 GGGAGGAAGGGGGAGAAGAG 60.693 65.000 0.00 0.00 0.00 2.85
1018 1078 1.396594 GGGAGGAAGGGGGAGAAGA 59.603 63.158 0.00 0.00 0.00 2.87
1019 1079 1.694525 GGGGAGGAAGGGGGAGAAG 60.695 68.421 0.00 0.00 0.00 2.85
1020 1080 2.191846 AGGGGAGGAAGGGGGAGAA 61.192 63.158 0.00 0.00 0.00 2.87
1021 1081 2.543637 AGGGGAGGAAGGGGGAGA 60.544 66.667 0.00 0.00 0.00 3.71
1031 1093 3.017581 CCAACCAGGGAGGGGAGG 61.018 72.222 0.00 0.00 43.89 4.30
1032 1094 1.852626 AACCAACCAGGGAGGGGAG 60.853 63.158 4.58 0.00 43.89 4.30
1033 1095 2.160171 CAACCAACCAGGGAGGGGA 61.160 63.158 4.58 0.00 43.89 4.81
1034 1096 2.440599 CAACCAACCAGGGAGGGG 59.559 66.667 4.58 0.00 43.89 4.79
1035 1097 2.018884 AACCAACCAACCAGGGAGGG 62.019 60.000 4.58 0.00 43.89 4.30
1049 1111 3.327404 GGAGGGAGGCGGAACCAA 61.327 66.667 0.00 0.00 43.14 3.67
1064 1126 2.682136 TGGAGATCAACGCGGGGA 60.682 61.111 12.47 7.90 0.00 4.81
1071 1133 0.322546 GTGGGTGGGTGGAGATCAAC 60.323 60.000 0.00 0.00 0.00 3.18
1072 1134 1.497309 GGTGGGTGGGTGGAGATCAA 61.497 60.000 0.00 0.00 0.00 2.57
1073 1135 1.923395 GGTGGGTGGGTGGAGATCA 60.923 63.158 0.00 0.00 0.00 2.92
1074 1136 2.998949 GGTGGGTGGGTGGAGATC 59.001 66.667 0.00 0.00 0.00 2.75
1088 1150 4.498520 AGATCGACTGGCGCGGTG 62.499 66.667 8.83 0.46 40.61 4.94
1089 1151 4.498520 CAGATCGACTGGCGCGGT 62.499 66.667 8.83 2.13 42.39 5.68
1117 1219 4.388378 AGTAGTATCAAGAAAGCCGTCC 57.612 45.455 0.00 0.00 0.00 4.79
1141 1243 2.442413 CGGTAAGGATGGAGCCAAAAA 58.558 47.619 0.00 0.00 0.00 1.94
1146 1248 1.069935 GAGCGGTAAGGATGGAGCC 59.930 63.158 0.00 0.00 0.00 4.70
1147 1249 0.530870 GTGAGCGGTAAGGATGGAGC 60.531 60.000 0.00 0.00 0.00 4.70
1148 1250 0.105039 GGTGAGCGGTAAGGATGGAG 59.895 60.000 0.00 0.00 0.00 3.86
1150 1252 0.469917 ATGGTGAGCGGTAAGGATGG 59.530 55.000 0.00 0.00 0.00 3.51
1151 1253 2.332063 AATGGTGAGCGGTAAGGATG 57.668 50.000 0.00 0.00 0.00 3.51
1152 1254 2.026262 ACAAATGGTGAGCGGTAAGGAT 60.026 45.455 0.00 0.00 0.00 3.24
1154 1256 1.821216 ACAAATGGTGAGCGGTAAGG 58.179 50.000 0.00 0.00 0.00 2.69
1184 1286 2.050350 CCTGGCCAACATCCTGCAG 61.050 63.158 7.01 6.78 0.00 4.41
1291 1397 1.946984 TAGTTAGTCAGGTGGGGGTG 58.053 55.000 0.00 0.00 0.00 4.61
1295 1401 5.997384 AGTTAGTTAGTTAGTCAGGTGGG 57.003 43.478 0.00 0.00 0.00 4.61
1296 1402 6.405619 GGCTAGTTAGTTAGTTAGTCAGGTGG 60.406 46.154 0.00 0.00 0.00 4.61
1298 1404 5.655974 GGGCTAGTTAGTTAGTTAGTCAGGT 59.344 44.000 0.00 0.00 0.00 4.00
1299 1405 5.068855 GGGGCTAGTTAGTTAGTTAGTCAGG 59.931 48.000 0.00 0.00 0.00 3.86
1300 1406 5.892686 AGGGGCTAGTTAGTTAGTTAGTCAG 59.107 44.000 0.00 0.00 0.00 3.51
1301 1407 5.835582 AGGGGCTAGTTAGTTAGTTAGTCA 58.164 41.667 0.00 0.00 0.00 3.41
1309 1419 5.252164 ACCAAATCAAGGGGCTAGTTAGTTA 59.748 40.000 0.00 0.00 0.00 2.24
1315 1425 3.181423 TGAAACCAAATCAAGGGGCTAGT 60.181 43.478 0.00 0.00 0.00 2.57
1375 1494 6.803366 AAGTACTCCTACGTGGGATAAATT 57.197 37.500 22.01 14.26 34.56 1.82
1376 1495 7.065504 AGTAAGTACTCCTACGTGGGATAAAT 58.934 38.462 22.01 8.87 34.56 1.40
1378 1497 6.006275 AGTAAGTACTCCTACGTGGGATAA 57.994 41.667 22.01 9.64 34.56 1.75
1379 1498 5.636903 AGTAAGTACTCCTACGTGGGATA 57.363 43.478 22.01 12.64 34.56 2.59
1380 1499 4.516652 AGTAAGTACTCCTACGTGGGAT 57.483 45.455 22.01 13.61 34.56 3.85
1381 1500 4.384208 GGTAGTAAGTACTCCTACGTGGGA 60.384 50.000 20.50 20.50 37.73 4.37
1382 1501 3.879892 GGTAGTAAGTACTCCTACGTGGG 59.120 52.174 12.53 12.53 37.73 4.61
1386 1505 4.450053 AGCTGGTAGTAAGTACTCCTACG 58.550 47.826 18.93 11.69 37.73 3.51
1387 1506 9.737844 ATATTAGCTGGTAGTAAGTACTCCTAC 57.262 37.037 18.03 18.03 37.73 3.18
1433 1552 3.559238 AAGGAGCGTGCAGTTTAATTG 57.441 42.857 0.00 0.00 0.00 2.32
1469 1603 2.128853 ATTGGTGCACCGAAACTGCG 62.129 55.000 29.54 0.00 37.46 5.18
1478 1616 8.959548 TGAATATATGATTGATATTGGTGCACC 58.040 33.333 29.67 29.67 31.15 5.01
1512 1650 5.625197 GCAAAAGATGTGGTGGATTTGCTAT 60.625 40.000 12.32 0.00 45.45 2.97
1525 1663 3.126514 CAGAGGCAGTAGCAAAAGATGTG 59.873 47.826 0.00 0.00 44.61 3.21
1547 1685 3.259625 AGCTACTCCCTCTGTTGAGAAAC 59.740 47.826 0.00 0.00 42.73 2.78
1572 1747 9.694137 GAATATATACTGAACAGGTTGGAGTAC 57.306 37.037 6.76 0.00 0.00 2.73
1648 1823 7.065923 GGGACTCAGATTCCAAACTGTAATTAC 59.934 40.741 8.75 8.75 34.45 1.89
1649 1824 7.110155 GGGACTCAGATTCCAAACTGTAATTA 58.890 38.462 8.98 0.00 34.45 1.40
1651 1826 5.501156 GGGACTCAGATTCCAAACTGTAAT 58.499 41.667 8.98 0.00 34.45 1.89
1676 1853 4.697352 GCAATCACTGTGAATGTAGTCCTT 59.303 41.667 22.78 4.98 30.25 3.36
1679 1856 5.869753 AAGCAATCACTGTGAATGTAGTC 57.130 39.130 22.78 9.58 30.25 2.59
1680 1857 6.000219 AGAAAGCAATCACTGTGAATGTAGT 59.000 36.000 22.78 10.98 30.25 2.73
1682 1859 6.148315 CAGAGAAAGCAATCACTGTGAATGTA 59.852 38.462 22.78 0.00 34.54 2.29
1683 1860 5.048921 CAGAGAAAGCAATCACTGTGAATGT 60.049 40.000 22.78 10.27 34.54 2.71
1684 1861 5.391449 CAGAGAAAGCAATCACTGTGAATG 58.609 41.667 19.06 19.06 34.54 2.67
1702 1884 4.898320 TGTTAAGCTGAGATTTGCAGAGA 58.102 39.130 0.00 0.00 35.39 3.10
1717 1925 1.135402 CAAACGGCTGGGATGTTAAGC 60.135 52.381 0.00 0.00 36.17 3.09
1730 1938 0.383949 TGGCAGAGAAAACAAACGGC 59.616 50.000 0.00 0.00 0.00 5.68
1731 1939 4.701956 ATATGGCAGAGAAAACAAACGG 57.298 40.909 0.00 0.00 0.00 4.44
1733 1941 8.028938 ACACAATATATGGCAGAGAAAACAAAC 58.971 33.333 0.00 0.00 0.00 2.93
1754 1973 6.228258 GGAGACTCCAAGTGTAATAACACAA 58.772 40.000 17.10 0.00 46.35 3.33
1786 2006 4.078639 AGGTGAACAGGAAGAGAAACTG 57.921 45.455 0.00 0.00 38.19 3.16
1796 2016 0.753867 TGTGCGTTAGGTGAACAGGA 59.246 50.000 0.00 0.00 37.99 3.86
1816 2036 1.032794 ACACAGTCAGAAGTCAGCGA 58.967 50.000 0.00 0.00 0.00 4.93
1819 2039 1.270518 CCCCACACAGTCAGAAGTCAG 60.271 57.143 0.00 0.00 0.00 3.51
1830 2051 2.867109 AGAAGATGAACCCCACACAG 57.133 50.000 0.00 0.00 0.00 3.66
1833 2054 4.111577 AGGAATAGAAGATGAACCCCACA 58.888 43.478 0.00 0.00 0.00 4.17
1874 2097 3.138283 TGGAAAAGGTGACACTTGGAGAT 59.862 43.478 5.39 0.00 0.00 2.75
1903 2126 4.437390 GGACAGTTAATCTTGTTCCATGCG 60.437 45.833 0.00 0.00 0.00 4.73
1904 2127 4.458989 TGGACAGTTAATCTTGTTCCATGC 59.541 41.667 0.00 0.00 0.00 4.06
1935 2158 1.448985 TTAGTGTTTCCATGCCGAGC 58.551 50.000 0.00 0.00 0.00 5.03
1939 2162 2.672195 GCAGCTTTAGTGTTTCCATGCC 60.672 50.000 0.00 0.00 0.00 4.40
1957 2180 5.964958 TTTTCCTTGAATCCTACTTGCAG 57.035 39.130 0.00 0.00 0.00 4.41
1985 2208 1.271054 GCTGGGTCAGATGACAGTGTT 60.271 52.381 14.52 0.00 46.47 3.32
2021 2249 4.476752 TTACCGGCGGCATCCACC 62.477 66.667 28.71 0.00 0.00 4.61
2027 2255 4.627801 TTGCTGTTACCGGCGGCA 62.628 61.111 28.71 11.51 46.53 5.69
2028 2256 3.799755 CTTGCTGTTACCGGCGGC 61.800 66.667 28.71 11.60 46.53 6.53
2029 2257 2.047655 TCTTGCTGTTACCGGCGG 60.048 61.111 27.06 27.06 46.53 6.13
2037 2265 2.639839 ACTCTACCCATGTCTTGCTGTT 59.360 45.455 0.00 0.00 0.00 3.16
2053 2281 3.763897 TGTGAGTATCTGCTTGCACTCTA 59.236 43.478 10.71 1.00 38.56 2.43
2075 2303 3.485463 TCGGTGGAGAAATTCAGTGTT 57.515 42.857 0.00 0.00 0.00 3.32
2076 2304 3.071023 TCTTCGGTGGAGAAATTCAGTGT 59.929 43.478 0.00 0.00 0.00 3.55
2099 2327 0.897621 TCTTCAGCATCTTCTCGGCA 59.102 50.000 0.00 0.00 0.00 5.69
2144 2372 3.053544 TCTTTCTCTCCTCGGTCCAGTAT 60.054 47.826 0.00 0.00 0.00 2.12
2336 2564 2.954318 CCGGAGAGTCTTCCCGTTTATA 59.046 50.000 16.61 0.00 41.53 0.98
2378 2606 3.306019 CCACATTGTAGCCCAAAACCTTC 60.306 47.826 0.00 0.00 36.44 3.46
2520 2763 6.515272 ACAAATCTGCTCGGTTTGATTAAT 57.485 33.333 15.89 0.00 36.58 1.40
2524 2769 6.582636 TCTATACAAATCTGCTCGGTTTGAT 58.417 36.000 15.89 9.33 36.58 2.57
2561 2838 4.710324 CTTTACATATAAACCTGCCCGGA 58.290 43.478 0.73 0.00 36.31 5.14
2562 2839 3.252458 GCTTTACATATAAACCTGCCCGG 59.748 47.826 0.00 0.00 39.35 5.73
2564 2841 5.130350 TGAGCTTTACATATAAACCTGCCC 58.870 41.667 0.00 0.00 0.00 5.36
2566 2843 9.665264 GTAAATGAGCTTTACATATAAACCTGC 57.335 33.333 2.55 0.00 45.68 4.85
2594 2871 9.436957 CGGTCAATGAGCTTTATATATAAACCT 57.563 33.333 12.90 12.04 0.00 3.50
2602 2879 9.209175 GATAAACTCGGTCAATGAGCTTTATAT 57.791 33.333 10.85 3.28 36.94 0.86
2605 2882 6.403049 TGATAAACTCGGTCAATGAGCTTTA 58.597 36.000 10.85 8.90 36.94 1.85
2671 3169 8.853077 TCAGATCTGTCATGAAGTATGTTTTT 57.147 30.769 21.92 0.00 38.01 1.94
2676 3174 7.873505 ACATCATCAGATCTGTCATGAAGTATG 59.126 37.037 23.31 19.81 33.24 2.39
2695 3193 2.262572 GGCACGAAACCAACATCATC 57.737 50.000 0.00 0.00 0.00 2.92
2722 3220 8.438676 ACCGAGTTTATCCAGAAAAATATCAG 57.561 34.615 0.00 0.00 0.00 2.90
2734 3232 5.479375 ACTTAAGTCTGACCGAGTTTATCCA 59.521 40.000 1.12 0.00 36.66 3.41
2843 3637 9.923143 TTATGGTTATACGATTTCATCTACCTG 57.077 33.333 0.00 0.00 0.00 4.00
2845 3639 9.148104 GGTTATGGTTATACGATTTCATCTACC 57.852 37.037 0.00 0.00 0.00 3.18
2898 3692 4.389576 CCCAACTTGTCTGCGCGC 62.390 66.667 27.26 27.26 0.00 6.86
2899 3693 3.726517 CCCCAACTTGTCTGCGCG 61.727 66.667 0.00 0.00 0.00 6.86
2900 3694 4.043200 GCCCCAACTTGTCTGCGC 62.043 66.667 0.00 0.00 0.00 6.09
2901 3695 2.594303 TGCCCCAACTTGTCTGCG 60.594 61.111 0.00 0.00 0.00 5.18
2902 3696 1.799258 CTGTGCCCCAACTTGTCTGC 61.799 60.000 0.00 0.00 0.00 4.26
2903 3697 1.799258 GCTGTGCCCCAACTTGTCTG 61.799 60.000 0.00 0.00 0.00 3.51
2904 3698 1.529244 GCTGTGCCCCAACTTGTCT 60.529 57.895 0.00 0.00 0.00 3.41
2905 3699 1.827789 TGCTGTGCCCCAACTTGTC 60.828 57.895 0.00 0.00 0.00 3.18
2906 3700 2.127232 GTGCTGTGCCCCAACTTGT 61.127 57.895 0.00 0.00 0.00 3.16
2907 3701 2.079020 CTGTGCTGTGCCCCAACTTG 62.079 60.000 0.00 0.00 0.00 3.16
2908 3702 1.829533 CTGTGCTGTGCCCCAACTT 60.830 57.895 0.00 0.00 0.00 2.66
2909 3703 2.203394 CTGTGCTGTGCCCCAACT 60.203 61.111 0.00 0.00 0.00 3.16
2910 3704 3.297620 CCTGTGCTGTGCCCCAAC 61.298 66.667 0.00 0.00 0.00 3.77
2911 3705 4.601794 CCCTGTGCTGTGCCCCAA 62.602 66.667 0.00 0.00 0.00 4.12
2916 3710 3.969802 GTGTGCCCTGTGCTGTGC 61.970 66.667 0.00 0.00 42.00 4.57
2917 3711 1.665264 TTTGTGTGCCCTGTGCTGTG 61.665 55.000 0.00 0.00 42.00 3.66
2918 3712 0.756442 ATTTGTGTGCCCTGTGCTGT 60.756 50.000 0.00 0.00 42.00 4.40
2919 3713 1.200716 CTATTTGTGTGCCCTGTGCTG 59.799 52.381 0.00 0.00 42.00 4.41
2920 3714 1.538047 CTATTTGTGTGCCCTGTGCT 58.462 50.000 0.00 0.00 42.00 4.40
2921 3715 0.109132 GCTATTTGTGTGCCCTGTGC 60.109 55.000 0.00 0.00 41.77 4.57
2978 3799 0.181114 TGTCATAGCACCCATGAGGC 59.819 55.000 0.00 0.00 40.58 4.70
2979 3800 2.715749 TTGTCATAGCACCCATGAGG 57.284 50.000 0.00 0.00 43.78 3.86
2980 3801 3.144506 GGATTGTCATAGCACCCATGAG 58.855 50.000 0.00 0.00 33.18 2.90
2981 3802 2.485302 CGGATTGTCATAGCACCCATGA 60.485 50.000 0.00 0.00 0.00 3.07
2982 3803 1.875514 CGGATTGTCATAGCACCCATG 59.124 52.381 0.00 0.00 0.00 3.66
2983 3804 1.815408 GCGGATTGTCATAGCACCCAT 60.815 52.381 0.00 0.00 0.00 4.00
2984 3805 0.463654 GCGGATTGTCATAGCACCCA 60.464 55.000 0.00 0.00 0.00 4.51
2985 3806 0.179045 AGCGGATTGTCATAGCACCC 60.179 55.000 0.00 0.00 0.00 4.61
3034 3855 0.107456 ATTCTAGCTGTGGGATGGCG 59.893 55.000 0.00 0.00 0.00 5.69
3066 3887 2.202566 GTCCTAGTAATGCAGCCGTTC 58.797 52.381 0.00 0.00 0.00 3.95
3067 3888 1.553248 TGTCCTAGTAATGCAGCCGTT 59.447 47.619 0.00 0.00 0.00 4.44
3068 3889 1.191535 TGTCCTAGTAATGCAGCCGT 58.808 50.000 0.00 0.00 0.00 5.68
3077 3898 2.504175 GCACTGGGGAATGTCCTAGTAA 59.496 50.000 3.81 0.00 45.14 2.24
3078 3899 2.116238 GCACTGGGGAATGTCCTAGTA 58.884 52.381 3.81 0.00 45.14 1.82
3089 3912 2.359850 GCATGTTCGCACTGGGGA 60.360 61.111 0.00 0.00 0.00 4.81
3090 3913 2.360350 AGCATGTTCGCACTGGGG 60.360 61.111 0.00 0.00 0.00 4.96
3127 3950 0.387929 TCAACAAGAGACCGCGAGTT 59.612 50.000 8.23 0.00 0.00 3.01
3135 3987 3.793492 GTGCTTTGCTTTCAACAAGAGAC 59.207 43.478 0.00 0.00 30.75 3.36
3142 3994 3.253230 ACTTGTGTGCTTTGCTTTCAAC 58.747 40.909 0.00 0.00 30.75 3.18
3174 4028 2.849880 TTTTGAGTTGAGTGTGCTGC 57.150 45.000 0.00 0.00 0.00 5.25
3217 4072 2.328099 CCTCTTCGGGTTGTGCTGC 61.328 63.158 0.00 0.00 0.00 5.25
3227 4083 0.898320 TTTCCAGCTCTCCTCTTCGG 59.102 55.000 0.00 0.00 0.00 4.30
3228 4084 2.977772 ATTTCCAGCTCTCCTCTTCG 57.022 50.000 0.00 0.00 0.00 3.79
3300 4176 6.265196 TGCATAACAAGTCAACCTCTTGAAAT 59.735 34.615 11.72 3.28 43.17 2.17
3310 4186 6.593382 AGAAGAGATCTGCATAACAAGTCAAC 59.407 38.462 0.00 0.00 36.88 3.18
3416 4292 2.367202 TGATGGCGGGGAGTTCCTC 61.367 63.158 0.00 0.00 35.95 3.71
3431 4307 1.578215 ATGCCAAGAGCCTGGGTGAT 61.578 55.000 1.59 0.00 42.71 3.06



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.