>input_sequence_51126
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-------------------ATGCGTGCGTACTGCTGCTCTT--CTCCCCCTTCCTCCCCTCCCTGGTTGGTTGGTTCCGC
CTCCCTCCCCGCGTTGATCTCCACCCACCCACCGCGCC----------------------------------------AG
TCGATCTGTGACTGCGTCGGACGGCTTTCTTGATACTACTTTTTTTTGGCTCCATCCTTACCGCTCACCATTTGTGCGGC
ACTCTC----TGCAGGATGTTGGCCAGGTCGCCGGCGCTGCCCTCCCCCTTCCTGACGGCCACTGAAACTGCCGCCGCTT
CCTCGGCCTTCTTCCAACCCGTAAGATCCGATGCCCCACCCCCACCT----GACTAACTAACTAA-CTAGCCCCTTGATT
TGGTTTCAACTGCTTGCGC----GCGCTC---ACTCTGTTTATTGGGGATTT-AATTTATCCCACGTAGGAGTACTTACT
ACCAGCTAATATATGAATTCCCTCCTGAATACAATTAAACTGCACGCTCCTTATATATGCT---------------AGCT
AGCGCAG----TTTCGGTGCACCAATATCAATCATATATTCATATGCCAATAGCAAATCCACCACATCTTTTGCTACTGC
CTCTG---------------------------------TTTCTCAACA----GAGGGAGTAGCTCTGTACTCCAACCTGT
TCAGTATATATTCAGATGATATGTGGAACTATTTATTTTAGGCTTTTTTACTACTACCAAGCGTAAT--TACAGTTTGGA
ATCTGAGTCCCCAAGGACTACA-----TTCACAGTGATTGCTTTCTCTG--------------------------CAAAT
CTCAGCTTAACATCCCAGCCG--T------TTGTTTTCTCTGCCATATA---TTGTGTTATTACACTTGGAGTCTCCAGT
TT-CTCAGTTTCTCTTCCTGTTCACCTAACGCACATCGCTGAC-TTCTGACTGTGTGGGGTTCATCTTCTATTCCTCCAG
TGCC--ATCTCTCGACATCTCCAAGTGTCACCTTTTCCAAGAAGACGCATGGAACAAGATTAACTGTCCAGCCAAACGCT
CGGCATGGAAACACTAAAGCTGCAAGTAGGATTCAAGGAAAATGGCGAACA-----CTGTCATCTGACCCAGCTCAGGCC
GCCGCTGTGGTGGATGCCGCCGGTAACAGCAAGACATGGGTAGAGTGCAAGCAGATACTCACAACACTGAATTTCTCCAC
CGAAGATGCCGAGAAGATGCTGAAGAAGGCGTTCGGATGGCTCCATTCGCCATACTGGACCGAGGAGAGAAAGAAGGAGG
TTCCGAGCACGGAGGTGGTAAGCGGAGTGCTGGACTACGTCAGGGGCCTCGGGCTATCTGACGAAGACCTTTACAAGCTG
CTCAAGAAATTCCCAGAGGTTCTTGGGTGCGATCTTGAGAGCGAGGTGAAGCTGAATGTCGGCAAGCTGGACAGCGACTG
GGGTATAAACGGGAAGACTCTCCGGAGTGTTCTTTTGCGGAATCCGAAGGTTTTGGGCTACAATGTGGATTGCAGAGGGG
ACTGTGCGGCGCAGTGCACCCGCTGCTGGGTTAGGTTTTAG---------------------------------------
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---------
>chr4A_1_TraesCS4A01G352300
CCGGATCCTGACCACGATGCGCTGGTGGTGGACGATAACTAGTCTACGGGCCTTGAAACGCCACCATTGGTCGCCGCGGG
CAAGGTTGATTTACCCCACCCCCCAGCACCTTGTACTCAAAATCACCGTACGAACCCTAAAATCCGATGCTCGAAATCCA
ATCCCCTAACCGTCCGGTATTAAAACTGATCCCCAACGCTTGAGTCGATTGCGGAAATCCAATCTAAAACGCCAATCGAA
TACAGGAAATCAAAAAGATGGGACAAATGGCTTACCGCCATTGCTGAGCTGCTGCCGGCGCGGTGCTGAAGACGGTGATC
GCCGTCGGTGTGAGAGTGGGGATAGGGGAGAGAGAGCGGTGAGGGTAATTTACGCCGCAGTTTTGTGAAACAACTCGACG
CCTCGAGACTGCCGTCGCCCACATGCCTCGAGTTGCATCGCTCGGGCCTGGCTTTGGAAAAACGGCC---TCGCCCGTTC
CCTCTGAGCTAGGCCCAGAGGTGTGTTTAG---------------TATTTTGATGCGGTATAAACAATCAAAGAGGTCAA
ATTCTCCCCGCACGGATCTGGTTGGGTGGATGCGGGCAACAAGCG----------------TCCAGTAAATGACGGCAGG
AGAAGGAAAAGGGCACCTGCA---TATCAAACGAGGATACTA---------GTGTGGTGGGTGATGCGTCTACCTACGCT
GCTTGCTGTCAGTCAAAAGAGAGACACCTGCAGCTGCAAAACAAAACGAAGCCTGTGGTGTGTTTCGTTTGTGGTGGCTC
TTGCGAGGCCTCGCGATCGCGAGTGGCTGGCTGGAACCGAACCG--GCTCCCAAGGGCCATCTCCCTCCCTCTCCGGCTT
CCCCACCCACCCACCTCTGCCGAGACCCGAGAGGAGAGAGTCAGACCGGCCGAGGAGCCAGCCACGCCACGCCACAGGGA
AGACAAGAGAAGCAGAAGCAGAGGTGTGGGGAGGAGA----------GCCACAGGGAAGAAGAG-AAGCCAGGAGCGGCG
GCCGCCCTCGCCCTGCCCCATGCGTGCGTACTGCTGCTCTT--CTCCCCCTTCCTCCCCTCCCTGGTTGGTTGGTTCCGC
CTCCCTCCCCGCGTTGATCTCCACCCACCCACCGCGCC----------------------------------------AG
TCGATCTGTGACTGCGTCGGACGGCTTTCTTGATACTACTTTTTTTTGGCTCCATCCTTACCGCTCACCATTTGTGCGGC
ACTCTC----TGCAGGATGTTGGCCAGGTCGCCGGCGCTGCCCTCCCCCTTCCTGACGGCCACTGAAACTGCCGCCGCTT
CCTCGGCCTTCTTCCAACCCGTAAGATCCGATGCCCCACCCCCACCT----GACTAACTAACTAA-CTAGCCCCTTGATT
TGGTTTCAACTGCTTGCGC----GCGCTC---ACTCTGTTTATTGGGGATTT-AATTTATCCCACGTAGGAGTACTTACT
ACCAGCTAATATATGAATTCCCTCCTGAATACAATTAAACTGCACGCTCCTTATATATGCT---------------AGCT
AGCGCAG----TTTCGGTGCACCAATATCAATCATATATTCATATGCCAATAGCAAATCCACCACATCTTTTGCTACTGC
CTCTG---------------------------------TTTCTCAACA----GAGGGAGTAGCTCTGTACTCCAACCTGT
TCAGTATATATTCAGATGATATGTGGAACTATTTATTTTAGGCTTTTTTACTACTACCAAGCGTAAT--TACAGTTTGGA
ATCTGAGTCCCCAAGGACTACA-----TTCACAGTGATTGCTTTCTCTG--------------------------CAAAT
CTCAGCTTAACATCCCAGCCG--T------TTGTTTTCTCTGCCATATA---TTGTGTTATTACACTTGGAGTCTCCAGT
TT-CTCAGTTTCTCTTCCTGTTCACCTAACGCACATCGCTGAC-TTCTGACTGTGTGGGGTTCATCTTCTATTCCTCCAG
TGCC--ATCTCTCGACATCTCCAAGTGTCACCTTTTCCAAGAAGACGCATGGAACAAGATTAACTGTCCAGCCAAACGCT
CGGCATGGAAACACTAAAGCTGCAAGTAGGATTCAAGGAAAATGGCGAACA-----CTGTCATCTGACCCAGCTCAGGCC
GCCGCTGTGGTGGATGCCGCCGGTAACAGCAAGACATGGGTAGAGTGCAAGCAGATACTCACAACACTGAATTTCTCCAC
CGAAGATGCCGAGAAGATGCTGAAGAAGGCGTTCGGATGGCTCCATTCGCCATACTGGACCGAGGAGAGAAAGAAGGAGG
TTCCGAGCACGGAGGTGGTAAGCGGAGTGCTGGACTACGTCAGGGGCCTCGGGCTATCTGACGAAGACCTTTACAAGCTG
CTCAAGAAATTCCCAGAGGTTCTTGGGTGCGATCTTGAGAGCGAGGTGAAGCTGAATGTCGGCAAGCTGGACAGCGACTG
GGGTATAAACGGGAAGACTCTCCGGAGTGTTCTTTTGCGGAATCCGAAGGTTTTGGGCTACAATGTGGATTGCAGAGGGG
ACTGTGCGGCGCAGTGCACCCGCTGCTGGGTTAGGTTTTAGTGTGCTGTTCTGAATTATTACTGCGAACACCTTCAGAAG
TTCAGCCGATAC---------------TCTGTTTTTGCATCGATT--AATCAA--------------------------A
CCGAGCAGATTTGTATAGATGGATGTAC------TCCTCCGGGCAGGTTTATATGTAAAGCTCATTTACCAGGTTTATAT
ATAAAGCTCAT--------------------------------TGACC-GAGTTTATCATGAAAAATATTGACATCTAC-
--------------------------------------------------------------------------------
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---------------------------AACTTCACATAAATCTACTATAAAAACATACTTCATGACAGATCTGATGATGT
TGGTTTCGTGCCGTAGATGCTGATATTTTTCTGGATAAACTCGGTCAGA-------------------------------
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-------------------CTTAAGTAATAAATGTGTGGGTTTACTTC-----TAGTATAAAATAAAGATTACTAGTAGA
AC-TGAAGCAGTTGATAAGTAATGATAACAAATTAACAGGTAGATGAAATCGTATAACCATAACCACTCGTGGCAGACAA
GTTGGGGCACAGCGCGCAGACAAGTTGGGGCACAGCACAGGGCACAC---AAATAGCTTAAATAAACAAGATCAAACAGA
CCC------------------------CATGAGTCATGGCCTCATGGGTGCTATGACAATCCGCTCGCTCCGTGCCATGA
TTCTTTCGTAGCTGCGCCATCCCACAGCTAGAATCAGGCGCGACGCGAACGGCTGCATTACTAG--GACATTCCCCAGTG
CGAACATGCTCGACACCGGGTGCGCACTCAA-----------------------------CTCGCGGTCTCTTGTTGAAA
GCA--AAGCACACAAGTTTAGAAACCAGCAGCACACTCAACTCAAAA-TAGGAAAAGAAATGAAATGAAAAG-CAGCACA
ACCCGAAGA-------GGAGAGCTGGAAATTACCAGCACACACTGACCG---------ATATAA----TTTCAAACGGGA
GCATCCATGATTTCTATTTCAAGAGGTTGACTTGTTATGCAGATCTCTTCTTCAAGAAGCTGACTTGGTATGTGGATCTT
GTCGCCCAGGATTTCCATTCCCATCAACGACCATAAGAACCAGACATTTGTGAGGAACTCCCCGCCATCACCCAGGCTCT
TGGCATGCA
>chr5B_407
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------GACCGCCGCTGCCCACATGCCTCTAGTTGCATCGCTTGGACCTGGCTTTGGAAAAATGGCCGATTCACCCGTTC
CCACCGAGCCAGGCCCAAAGGTGGTTTAAGGTTCGTGCGGGTTAGTATTTTGATGTGACCTAGCCAATGAAACAGGTTAA
ATTCTTTGGTCAGGTTG------GGATGGATGCGGACAACCAAACGCGTCCACGGTGTATTTCCAGTTCATCACGGCGCG
AGAAGGAAAAGAGCACCTGCAGGATATCCAACGAGGCTACTATAGTGTGGTGTGTGGTGGGTGATGCGTCTACGC-----
---TGCTGTCAGTCAAAAGAGAGACACCTGCA-----AAAACAAAACGCTC---------TGTTTCGTTTGCGGTGGCTC
TTGCGAGGCCGCGCA------AGTGGCTGGACTGGAGCCTGGAGGCGCCCCCAAGGGCCATCTCCTCTCCGGCCTC----
---------CCCACCTCTGCCGAGACCCGTT--------------CCCGCTGAGGAGCCAGCCACGCCCACGCCAC----
AGACAAGAGAAT-AGAAGCAGAGGTGTGGGGAGGAGAGGCAGCCGCAGCCGCAGGGAAGAAGAGAAAGCCAAGAGCGGCG
GCG-----------GCCCCATGCGTGCGTACGTACTGCTACCCCTCCCCCTT-----CCTCCCTGGTTGGCCGGTTCCGC
CTCCCGCCCCGC----ATCTCCACCCACCGCGCGTGGCTATCGAATCGCAATCGAACCCCGATTCATCCCGGCCCAGGAG
TCCATCTGTGACTGCGTCCGACGACTTTCTTGATACGTATTTCTTTTTCTTTTTTGGGTTGT--TCACCATTTGTATCGC
ACTCTGTGTATGCAGGATGTTGGCCAGGTCGCCGGCGCTGCCCGTCCCCTACCTGACGGCCACTGAAACTGCCGCCGCCT
CCTCGGCCTTCTTCCAACCCGTAAGATGCGATGCCCTACCTACCTGACTAAGACTAACCAACTAGCCTAGCCCCTTGATT
TGGTTTCAACAGCTTGCGC----GCGCTCTTTACTCTGTTTATTGGGGAATTTTGTCCCATCCATCA---------TACT
ACCAGATAATATATGAATTCCCTCCTGAATATAATTAAACTGCACACTCCTTATATACGCT---------------AGCT
AGTGCAGTTACTTTCAGTGCACCAGCATCAATCATATTCATACATGCCAGTAGCAAATCCACTACATCTTTTGCTACTGC
CTCTCTGACTGTTCACAAATGTAAGAAAACGTCTTACATTTCTCAACAGAGGGAGGGAGTAGCTCTCTACTCCAACCTGT
TCGGG--ATATTCAGATGATATGTGCAACTATTTATTTTTAGGC--TTTACTACTACCAAGCACATTTATACAGTTTGGA
ATCTGAGTCCCCCAGACTACAACTACATTGACATTCATTGCTTGCTCTA--------------------------CAAAT
CTCAACTTAACATCCCCCGCTCCT------TTGTTTTCTCTGCAATGTA---CTGTGTTATTACACTTGGAGTCCCCAGT
TTTCTTAGTTTCTCTGCCTGTTGGCTTAACGCATGCCGATGAC-TTCTGAGTGAGTGGGATTCGTCTTCTATTCCTCCAG
TGCC--ATCTCTCCACTTCTCCAAGTGTCACCTTCTCCAAGAAGAAACATGGAACAAGATTAACTGTCCAGCCAAACACT
CCGCATGGAAACACTAAAGGTGCAAGTGGGATTCAAGGAAAATGGCGTACA-----CTGTCGTCTGACCCAGCTCAAGCC
GCCGCTGTCGTGGA---CGCCGGTGACAGCAAGACATGGGAAGAGTGCAAGCAGATACTCACCTCACTGAATTTCTCCAC
CCAAGACGCCGAGAAGATGCTGAAGAAGGCGTTCGGGTGGCTCCATTCGCCGTACTGGACCGAGGAGAGAAAGAAGGAGG
TTCCGAGCGCCGAGGTGGTAAGCGGAGTGCTGGACTACGTCAGGGGCCTGGGGCTCTCTGATGACGACCTTTACAAGCTG
CTCAAGAAATTCCCAGAGGTTCTTGGGTGCGATCTTGAGAGCGAGGTGAAGCTGAATGTCGGCAAGCTGGACAGCGATTG
GGGGATAAACGGGAAGACTCTCCGGAGTGTTCTTTTGCGGAATCCCAAGGTTTTGGGCTACAATGTGGATTGCCGAGGGG
ACTGCGCCGCGCAGTGCACCCGCTGCTGGGTTAGGTTTTAGTGTGTTGTTCTGAATTGTTACTGCGAACACCTTCAGAAG
TTCAGCTGGTAC---------------TCTGTTTTTGCATCGGTT--ATCCAA--------------------------A
CCAATCAGATTTGTATAGATGGGGATGTAATC---CCCTATT-----------------------------GGCGTATTT
ACAAGGCTCAT--------------------------------CGACCAGAGTTTATCGTGGAAAATATTAACATCTAC-
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---------------------------AACTTGGTATAAATCTAGTATGGAAATATACTTCATGACTGATCTAGTGATAT
TGATTTTGTATTGTAGATGTTAATATTTTTCCTGACAATCTTGGTCAAT-------------------------------
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-------------------TTTAATTAATAAATGTGTGGGTTTACTTT-----TAGTATAAACTAAAGATAACTTAT---
--TTATAGCAGTTTAGAAGTTATGCTAGCAA------------------------AACCATAACCACTCGTGGCAGACAA
GTTGGGGCACAT-----------------------CACAGGGCACACAAAAAAAAGCTTAAATAAACAAGATCAAACAGA
CCC------------------------CATGAGTCATG--------GGTGCTACGACAATCCACTCATTCTGTGCCATGA
TTCTTGTGTAGCTGTGCCATCCCACAGCTAGAATCAGGCACGGCGGAGGCGGCTGCAACACTAG--GACATCGCCCAGTG
CGAACATGCTCGACACCGGGGCGCACACTCAGACATGGCACGACGTGCACACACCGCACGCTGGCACTCTCTTATTGAAA
GCAAAAAGCACACAAGTTAAGAAACCAACAGCACGCTCAACTCAAAAGTAGGAAATGATATGAAAATAAAAT-CAGCACA
ACAGGAAGA-------GGTGGAGGAGAAGGCACCAATTGGTTTGAACAAGCAATTAAAGTATAATGAGTTTCAAACGGGA
GCACCTGTGATTTCT------------------------------TCTTCTCCGAGAGGATGACTTGGTATGTGGATCTT
GTCGCCCAGAATTTCCATTCCCATCAATGACCATAAGAACCAGACATTTGTAAGGAACTCCCCACCTTCACCCAGGCTCT
TGGCGTGCA
>chr5D_1186
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----------TGCAGGATGTTGGCCAGGTCGCCGGCGCTGCCCTTCCCCTTCCCGACGGCCACTGAAGCTTCCGC---TT
CGCCGGCCTTCTTTCAACCTGTAAGACGCGATGCTCATG---------------------------CTAGCCCCTCTCTC
TGTTTTTTAACTTTTAACACCTTGCGCTC---AACTTGTTTATTTCAGATTT-TGTCCCATCATAATTCATAGTCATACC
ACGACCCACATGGATTCCTGA-----------ATTTGAACTGCACACTACTCATATACGTACTACGTAGTATTATAAGCT
AGTGCAT----TTTCAGTACACCAATACGTATCAG--TCATACCTACCAGTAGCAAGCCAGATACGCCTTTTGCTATCTT
TCTACTCCCAACCTAGCA-------------------------------------------------------------T
TCAGTATATTCGGAGGAACTGG-------TATTTATCCTAGACTTTAGCACTAAACGTATTTA-----------------
--CTGATTTCTCTAGCGCAGTT-----TTCACATTCATTGATTGATTCGATTGGAGGGTATACGCATATGAGAACCAAGT
CTTAACTTGACAATTCACATCCCATATTGCTTCTTCTCTCTGCTATATACTGCTGTGTTTTTACACTTGGAGTTTTCAGT
TT-CTTGGTTTCTCTGCCTGCCGACTTAACACATACCGATGACTTTCTGATCGAGCGGGGTTCGCCTTCTATTCCTCCAG
TGTC--ATCTCTTGGCTTCCCCAACTGTGATCTTTTCCAACAAGAAACATGGAACAAGATTAACTGTCCAGCCAAACATT
CAGCACGGAAAAGCACAGCACGCAAGCAGGATTCACACAAGATGGCGGGCGCTC-----TCATCTGACCCGGCTCAGGCC
GCCGCTGTCGTGGA---TGCCGGTGACAGCAAGACATGGGAAGAGTGCAAGCAGATACTCACCTCACTGAATTTCTCCAC
CGAAGACGCCGAGAAGATGCTGAAGAAGGCGTTCGGATGGCTCCATTCGCCGTACTGGACCGATGAGAGAAAGAAGGAGG
TTCCGAGCGCGGAGGTGGTAAATGGAGTGCTGGACTACGTCAGGGGCCTCGGGCTCTCTGATGACGACCTTTACAAGCTG
CTCAAGAAATTCCCGGAGGTTCTTGGGTGCGATCTCGAGAGCGAGGTGAAGCTGAATGTCGGCAAGCTGGACAGTGACTG
GGGGATAAACGGCAAGACTCTCCGGAGCGTTCTGTTACGGAATCCCAAGGTTTTGGGCTACAATGTGGACTGCAGAGGGG
ACTGCGCGGCGCAGTGCACCCGCTGCTGGGTTAGGTTTTAGTGTGTTGTTCTGCGCTGTTACGGTGGAGAAATTCAGAAG
CTCAGATGATACGTTACCAACTGTCTGTCTGTTTTTGTATAGGTTATATTCAA--------------------------A
CCAAGCAGATTTGTATAGATGGATGTACATGTACTCCCTCCG-----------------------------GGAGGGTTT
ACAAAGCTAATTTGATTTGTCTCAAGTCAAAATATTTTAAGTTTGAGT-GAGTTTTTCGAAAAAAATACTAACATCTACA
GT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TTTATTTAAATCCAGTATGAAAATATACTCCATGATATATCTAGTGATAT
TGATTTCGTACCGTGGATGTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTTAAGTAATAAATACATGGGTTTACTTCCAGTCTAGTATAAACTGAATATAACTTGTAGA
AATTGTAGCAGTTTATAAGTAATGATAATAAATTTAAAAGTAGATGAAATCACATAAGCATATATACTCGCGGCAGGCAA
GTTGGAGCACAT-----------------------CACAAGGCACAC---AAATAGCTCAAGTAAACAAGATCAAACAGA
CCCAGGATAAGGACCCCATGACTACTCCATGAGTCATG--------TGTGCTATGACAATCCGCTCGCTCCGTGCCACGA
TTCTTTTGTAGCTATGCCATCTCACAGCTAGAATCAGGTGCGACGGAGGCGGCTGCCACACTATACGACATGGCCCGGTG
CGAACATGCTCGACACCGGGCATGTACTC--GACATGGCACAATGTGCACACACGGCACGCTCACGCTCTCTCATTGAAT
GCG--AAGCACCCAAGTTTAAAAACCAACAACACATTCAACTCAATA-TAGGAAAAGGAATTAAAAGAAAAACCAGCACA
TGAGGAAGA-------GGAGAGCTGAAAATTACCAGCACACACTGACCG---------ATACAA----TTTCAGACGGGA
GCATCCATGATTTCTGTTTCAAGAGATTGACTTGTTACGCGGATCTCTTCTTCAAGAAGCTGACTTGTTACGTGGATCTT
GTCACCAAAGGTTTCCATTCCCATCAACGACCATAAGAGCCAGACATTTGTAAGGAACTCCCCAGCTTCACCCAGGCTCT
TGGCATGCA
>chr5B_1808
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--------------------------TAATGCACACCAATGAC-TTGTGAGTGAGTGGGGTTCATGTTATGTTCCTCTAT
TTTGTGATCTCTCGACTTCTTCAAGTGGGATTCTTTCTAACAAGAAACTTGGAACAAGATTAAGTGTCCAGCCAAACATT
CAGGACGGTAAAATGCAGAACGCAAATAGGATTCACAGAAAATGATGGGCGCCCTGCTGTCATCTGACCCAGCTCAGGCC
GCCACTGTTGTGGA---TGCCGGTGACCGCAAAACATGGGAAGAGTGCAAGAAGATACTCACTTCACTGAAATTATCCAG
TGAAGACGCCAAGAAGATGCTGAAGAAGGCGTTGGGATGGATCCATTGGCCGTACTGGACCGAGGAGAGAAAGAAGGAGG
TTCCGAGTACCGAGGTGGTAAATGGAGTGCTGGACTACATCAGGGCCCTCGGACTATCTGACGACGATCTTTACAAGCTG
TTCAAGAAATTCCCAGAGGCTCTTCGATGCGATCTTGAGAGCAAGGTGAAGCTGAATGTCGGCAAGCTGGACAGCGACGG
GGGGATAAACGGGAAGACTCTCCAGAGTGTTCTTTTACGGAATCCAAAGGTTTTGGGATACAATGTGGATTGTAGAGGGG
ATTGTGCGGCGCAGTGCACCGGCTTCTTGGTTAGGTTTTAGTGTGCTGTTCTGCATTATTACTGCAAATAACTTCAGAAG
TTCAGACGATAC---------------TCTGTTTTTGCACCAGTTTTTTTTTTTGGGCGAGTTTGCACCAGTTATTTTGA
CCGAGCAGATTTCTATAGATGGATGTGA------TCCCTCCG-----------------------------GGCGGGTTT
ACAAGGCTCAT--------------------------------CGACC-GAGTTTATTGTGAAAAAATA-----------
-------------ATTAACATCATCTTT----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AACTTCATATAAATCCAGTATGAAAATAGACTTCATGACAGATCTAGTGATAT
AGATTCCGTGTCGTACATGTTGATATTTTTCCGGATAAACTCTGTCAAA-------------------------------
--------------------------------------------------------------------------------
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-------------------CTCAAGTAATAAATGT------------------------AAACTAAATGTAACTGGTGGA
AC-TGTGGCAGC----------TGACAACAAATTAATAAGCAGATGAAATCGTATAACCATAATCAGTCGTGGCAGACAA
GTT-------------------------------------GGCCCAC---AAATAGCTCAAGAAAACAAGATCAAACAGA
CCC------------------------CTGAAGGATACAG--------------------CCGCTCGCTCCGCACCATGA
TTCTTTTCTAGCTGTGCCATCCCACAGCTAGAATCAGGCACCACGCAGGCGGCTGTAACACTAT--GACATCACCCGGTG
CGAACATGCTCGACACCAGGCGCGCACCC--GACAAGGCGCGACGTGCACAGGCCGCACGCTCACGCCCTCTTATTGAAA
GCA--AAGCATCCAAGTTTAAAAACTAACAGCACACTCAACTCAAAT-TAGGAAAAGGAATGAAATGAAAAT-CAGCACA
ACAGGAAGA-------GGAGGAGGAAGACACACCATTTGATTCGAACAAGAAACCAAAATGTAA----TTTCACACTGGA
GCACCCATGATTCCT------------------------------TCTTCTTTAAGAGGCTGATTTTGTATGTGGATCTT
GTCGCCCAAGATTTCCATTCCCATCAACGACCATAAGAACCAGACATTTGTAAGGAATTCCCCACCTTCACCCAGGCTCT
TGGCGTGCA
>chr4A_2414
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ACTGCACGGCGCATTT-ACCCTCTGCTGGGTTA-GTTTTACTGTGTTGTTCTGCATTATTACTGTGGAGAGCTTCAGAAG
TTCAGCCGATAC---------------TCTGTTTTTGCATCGGTT--ATTCAA--------------------------A
CCGAGCAGATTTGCATGGATGGATGCAA------TCCCTTTT-----------------------------GGTGGATTT
ACAAGGCTCAT--------------------------------CGACC-GAGTTTATCATGAAAAATATTAACATCTACA
ACTTCGTATAAATATTAACATCTACATGTACAACTTTGGGTCTATTGTACGCAGCATTTCTCTACATTTCTAAAAACAAT
CTCTTACAGAAATCTAGGGAAAGACTGCGTACAATAGACCCAAAGTGGTCAGACCCTTCCCCGGAACCTGAGCAAGCGAG
AGCTACATGCACCGGGCTGCCCTTTACAACTTCGTATAAATCTAGTATGAAAATATACTTCATGATTGATCTAGTGATAT
TGATTTTGTATTGTAGATGTTAATATTTTTCCTGATAATCTTGGTCAAT-------------------------------
--------------------------------------------------------------------------------
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-------------------TTTAAGTAATAAATGTGTGGGTTTACTTC-----TAGTATAAACTAAAGATAACTTAT---
--TTGTAGCAGTTTAGAAGTAATGCTAGCAAATCTAGAAGTACATGAAATTGTATAACCATAACCACTCGCAGCAGACAA
GTTGGGGCACAT-----------------------CACAGGGCACAC---AAATAGCTTTAATAAACAAGATCAAACAAA
CCC------------------------CATGAGTCATG--------GGTGCTACGACAATCCGCTCACTCGGCGCCATGA
TTCTTTTGTAACTGTGCT--------GCTAGAATGAGGCACGATAAAGGCGGCTGCAACACTAG--GACATCACCCAGCA
CAAACATGCTCGACACCGGGCGAGCACTC--GACAAGGCGCGACATGCACAGGCTGCACGCTCATGCTCTCTTATTGAAA
GCA--AATCACACAAGTTTAGAAACCAACAATGCACTCAACTCAAAAATAGGAAAAGGAATGAAGAGAAGAT-CAGCACA
ACAGGAAGAGGAAGGAGGACGAGGAGAACACACCAATTGATTCGAACAAGCAATCGAAGTATAA----TTTCAAACGGGA
GCACCGGTGATTTCT------------------------------TCGTCTTCGAGAGGATGACTTGGTACGTGGATCTT
GTCACCCAGGATTTCCATTCCCATCAACGACCATAAGAACCAGACATTTGTAAGGAACTCCGCACCTGCACCCAGGCTCT
TGGCATGCA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS---S----SS-------------S------------S--S----------------S---------S-------
--S-S----S-------S-----SS--S---------------------------S-SSS--SS----S---S----S--
-----SSSSS--S-SSSSSSSSS--S---------S----S-SSS----------------------SS--S-----SS-
-----------S----------------S-------S------------------------------------SSSSSSS
SSS-----------------------------SSSSS-----------SSSSSSSSSSSS-----------S--------
----------S---SSSSSSS---------SSS-S-S-SSSSS-----S----------------SSS--SSS-SSSSSS
SSSSSSSSS--------------------SSSSSSSSSSSSSSSS--S--S-----------------SSSS-SSSSSSS
-----------SS-------------------------------------S--------------------S--------
--SSSSSSSSSSSS-----------------SSSSSSSSSS-----------SSSSS-------------SS--------
-----S------SSSS-------------SSS--S-S-------------------------------------------
--S---------------S----S------------SSS---S----SSS-SSS-SSS-SSSSS-----------SSS--
-----S--------------------------------------S-----------------------------------
---------------------------S--------S---SS-SSSS-----------S-----S---------------
----------S------------------------------------------SS-SSSSS---SS-SSSSSSS-S----
-------------------------------S-------------S-----------S----------------------
--S------------S---------------------SSSS-S------S------------S-----------------
----S-------------------------------------------------------------S-------------
-------------------------S------------------------------------SS-S--------------
------------S--SS-SSS------------S-S-------S------------------------------------
----S------------SS-S----------------------S--------S---------------------------
-----S---------S------S--S---------S--S-----------S--S--------------------------
----------------S----------------------------SS------------------------------S--
-S-----------------S---------------------------S--------------------------------
--------S-----SSS-------S---------------S---------------------SS----------------
------S--------------------------------------------S----------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
---S-----------------------------------------S----------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-----S-------------------------------
-------------------------------------SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---S-
-S--------------------------------------------------------------------S---------
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----------------------------------S---------S---S----S------------------SS----S-
--S----------------S-----------S---------------S--------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------S-------S---S-----
-----S-------S----------------------S-S-----------------------------------------
-----------SSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------
--------------------------------------SSSSSSSS----------------------------------
------S-------S-------------------------------SSS--------SS------------SS-------
--------------------S--------S------------------------------------S------S------
---------------------------S-------------------------------------------S--------
--SS----------------------------------------------------------------------------
---------------S---------S-----------S--S---------------------------------------
---------------------------------------------------S-----------S--S-------------
---------
>forward_718
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----------------------------------------------------------GGGTGATGCGTCTACCTACG--
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---------
>reverse_1938
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GCCGTTTGTTTTCTCTGCCA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>forward_756
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------AAGAGAGACACCTGCAGCTG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>reverse_2016
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TCCTGTTCACCTAACGCACA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>forward_1941
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TCAGCTTAACATCCCAGCCG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
>reverse_3855
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CGCCATCCCACAGCTAGAAT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------
