Multiple sequence alignment - TraesCS4A01G328100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G328100 chr4A 100.000 2945 0 0 1 2945 614020552 614017608 0.000000e+00 5439.0
1 TraesCS4A01G328100 chr5D 91.863 1229 65 11 202 1400 554515354 554516577 0.000000e+00 1683.0
2 TraesCS4A01G328100 chr5D 81.341 820 57 42 2178 2942 554517379 554518157 1.970000e-161 579.0
3 TraesCS4A01G328100 chr5D 93.417 319 16 3 1736 2049 554516578 554516896 4.440000e-128 468.0
4 TraesCS4A01G328100 chr5D 80.826 339 43 12 2475 2800 391310434 391310763 2.270000e-61 246.0
5 TraesCS4A01G328100 chr5D 96.296 81 3 0 2063 2143 554516880 554516960 1.840000e-27 134.0
6 TraesCS4A01G328100 chr5B 90.715 1077 66 10 296 1339 696170123 696169048 0.000000e+00 1404.0
7 TraesCS4A01G328100 chr5B 93.194 382 26 0 1662 2043 696169017 696168636 1.980000e-156 562.0
8 TraesCS4A01G328100 chr5B 87.582 153 11 3 370 514 696169974 696169822 1.400000e-38 171.0
9 TraesCS4A01G328100 chr5B 87.755 147 17 1 444 589 696170044 696169898 1.400000e-38 171.0
10 TraesCS4A01G328100 chr5B 90.909 55 3 1 2178 2230 696168570 696168516 4.070000e-09 73.1
11 TraesCS4A01G328100 chr3B 83.333 384 40 15 2433 2802 445238919 445239292 1.690000e-87 333.0
12 TraesCS4A01G328100 chr3D 82.768 383 39 10 2433 2802 346091836 346092204 1.700000e-82 316.0
13 TraesCS4A01G328100 chr4D 84.273 337 33 10 2480 2802 46142032 46141702 7.930000e-81 311.0
14 TraesCS4A01G328100 chr6D 82.948 346 36 13 2472 2802 472714978 472714641 1.030000e-74 291.0
15 TraesCS4A01G328100 chr6A 82.386 352 34 12 2472 2808 594287126 594287464 6.210000e-72 281.0
16 TraesCS4A01G328100 chr2D 82.895 304 30 12 2472 2762 43095785 43095491 1.350000e-63 254.0
17 TraesCS4A01G328100 chr1A 85.232 237 31 4 2574 2807 63861848 63861613 1.050000e-59 241.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G328100 chr4A 614017608 614020552 2944 True 5439.00 5439 100.00000 1 2945 1 chr4A.!!$R1 2944
1 TraesCS4A01G328100 chr5D 554515354 554518157 2803 False 716.00 1683 90.72925 202 2942 4 chr5D.!!$F2 2740
2 TraesCS4A01G328100 chr5B 696168516 696170123 1607 True 476.22 1404 90.03100 296 2230 5 chr5B.!!$R1 1934

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
49 50 0.249398 CCGACCCACTAGGAGGTTTG 59.751 60.0 7.33 4.19 39.89 2.93 F
1576 1616 0.038892 CCACAGTTGCAGCATCAACC 60.039 55.0 14.80 1.68 45.47 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1622 1662 0.033228 CGCCACCAATGCTTTTTCCA 59.967 50.0 0.0 0.0 0.0 3.53 R
2581 3101 0.320421 TAACTTGGGTGCAGAGCGTC 60.320 55.0 0.0 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.937201 AAAAGAAAAAGGGCTGTAGTGG 57.063 40.909 0.00 0.00 0.00 4.00
29 30 2.586648 AGAAAAAGGGCTGTAGTGGG 57.413 50.000 0.00 0.00 0.00 4.61
30 31 0.888619 GAAAAAGGGCTGTAGTGGGC 59.111 55.000 0.00 0.00 0.00 5.36
35 36 4.468689 GGCTGTAGTGGGCCGACC 62.469 72.222 15.08 0.32 38.91 4.79
45 46 3.155167 GGCCGACCCACTAGGAGG 61.155 72.222 0.00 0.00 39.89 4.30
46 47 2.363925 GCCGACCCACTAGGAGGT 60.364 66.667 5.69 5.69 39.89 3.85
47 48 1.988406 GCCGACCCACTAGGAGGTT 60.988 63.158 7.33 0.00 39.89 3.50
48 49 1.551019 GCCGACCCACTAGGAGGTTT 61.551 60.000 7.33 0.00 39.89 3.27
49 50 0.249398 CCGACCCACTAGGAGGTTTG 59.751 60.000 7.33 4.19 39.89 2.93
50 51 0.974383 CGACCCACTAGGAGGTTTGT 59.026 55.000 7.33 0.00 39.89 2.83
51 52 1.067071 CGACCCACTAGGAGGTTTGTC 60.067 57.143 7.33 4.87 39.89 3.18
52 53 1.278413 GACCCACTAGGAGGTTTGTCC 59.722 57.143 7.33 0.00 39.89 4.02
53 54 0.249398 CCCACTAGGAGGTTTGTCCG 59.751 60.000 0.00 0.00 42.05 4.79
54 55 0.974383 CCACTAGGAGGTTTGTCCGT 59.026 55.000 0.00 0.00 42.05 4.69
55 56 1.067071 CCACTAGGAGGTTTGTCCGTC 60.067 57.143 0.00 0.00 42.05 4.79
56 57 1.893801 CACTAGGAGGTTTGTCCGTCT 59.106 52.381 0.00 0.00 42.05 4.18
57 58 2.299297 CACTAGGAGGTTTGTCCGTCTT 59.701 50.000 0.00 0.00 42.05 3.01
58 59 2.299297 ACTAGGAGGTTTGTCCGTCTTG 59.701 50.000 0.00 0.00 42.05 3.02
59 60 0.250338 AGGAGGTTTGTCCGTCTTGC 60.250 55.000 0.00 0.00 42.05 4.01
60 61 0.534203 GGAGGTTTGTCCGTCTTGCA 60.534 55.000 0.00 0.00 41.99 4.08
61 62 0.586802 GAGGTTTGTCCGTCTTGCAC 59.413 55.000 0.00 0.00 41.99 4.57
71 72 4.393155 TCTTGCACGCGGCCAGAT 62.393 61.111 12.47 0.00 39.20 2.90
72 73 4.170062 CTTGCACGCGGCCAGATG 62.170 66.667 12.47 0.00 43.89 2.90
73 74 4.695993 TTGCACGCGGCCAGATGA 62.696 61.111 12.47 0.00 43.89 2.92
83 84 4.899239 CCAGATGACGCGCCCCTC 62.899 72.222 5.73 0.67 0.00 4.30
84 85 3.842923 CAGATGACGCGCCCCTCT 61.843 66.667 5.73 3.35 0.00 3.69
85 86 3.842923 AGATGACGCGCCCCTCTG 61.843 66.667 5.73 0.00 0.00 3.35
86 87 4.148825 GATGACGCGCCCCTCTGT 62.149 66.667 5.73 0.00 0.00 3.41
87 88 3.665675 GATGACGCGCCCCTCTGTT 62.666 63.158 5.73 0.00 0.00 3.16
88 89 3.254024 ATGACGCGCCCCTCTGTTT 62.254 57.895 5.73 0.00 0.00 2.83
89 90 3.423154 GACGCGCCCCTCTGTTTG 61.423 66.667 5.73 0.00 0.00 2.93
92 93 3.435186 GCGCCCCTCTGTTTGCTC 61.435 66.667 0.00 0.00 0.00 4.26
93 94 2.348998 CGCCCCTCTGTTTGCTCT 59.651 61.111 0.00 0.00 0.00 4.09
94 95 2.037136 CGCCCCTCTGTTTGCTCTG 61.037 63.158 0.00 0.00 0.00 3.35
95 96 2.338785 GCCCCTCTGTTTGCTCTGC 61.339 63.158 0.00 0.00 0.00 4.26
96 97 1.073722 CCCCTCTGTTTGCTCTGCA 59.926 57.895 0.00 0.00 36.47 4.41
97 98 1.239968 CCCCTCTGTTTGCTCTGCAC 61.240 60.000 0.00 0.00 38.71 4.57
98 99 0.535780 CCCTCTGTTTGCTCTGCACA 60.536 55.000 0.00 0.00 38.71 4.57
99 100 1.531423 CCTCTGTTTGCTCTGCACAT 58.469 50.000 0.00 0.00 38.71 3.21
100 101 1.199327 CCTCTGTTTGCTCTGCACATG 59.801 52.381 0.00 0.00 38.71 3.21
101 102 1.878088 CTCTGTTTGCTCTGCACATGT 59.122 47.619 0.00 0.00 38.71 3.21
102 103 1.605232 TCTGTTTGCTCTGCACATGTG 59.395 47.619 21.83 21.83 38.71 3.21
117 118 5.398603 CACATGTGCTGGGGTAAATAAAA 57.601 39.130 13.94 0.00 0.00 1.52
118 119 5.788450 CACATGTGCTGGGGTAAATAAAAA 58.212 37.500 13.94 0.00 0.00 1.94
161 162 9.838339 CAGTTTCCCACTAAATATAATCTCAGT 57.162 33.333 0.00 0.00 32.76 3.41
206 207 8.847196 AGGTCAGTTTAAACCTTAATCTCAAAC 58.153 33.333 14.72 0.00 43.45 2.93
217 218 8.934023 ACCTTAATCTCAAACCAATCACTAAA 57.066 30.769 0.00 0.00 0.00 1.85
221 222 9.691362 TTAATCTCAAACCAATCACTAAAAAGC 57.309 29.630 0.00 0.00 0.00 3.51
222 223 6.959639 TCTCAAACCAATCACTAAAAAGCT 57.040 33.333 0.00 0.00 0.00 3.74
230 231 8.273780 ACCAATCACTAAAAAGCTCAGAATAG 57.726 34.615 0.00 0.00 0.00 1.73
231 232 7.337942 ACCAATCACTAAAAAGCTCAGAATAGG 59.662 37.037 0.00 0.00 0.00 2.57
236 237 7.039011 TCACTAAAAAGCTCAGAATAGGAGTCA 60.039 37.037 0.00 0.00 34.83 3.41
237 238 7.064016 CACTAAAAAGCTCAGAATAGGAGTCAC 59.936 40.741 0.00 0.00 34.83 3.67
243 244 4.439974 GCTCAGAATAGGAGTCACTCTGTG 60.440 50.000 4.40 0.00 35.93 3.66
257 258 3.496130 CACTCTGTGCACTTTAAGACTGG 59.504 47.826 19.41 3.54 0.00 4.00
262 263 3.625764 TGTGCACTTTAAGACTGGAACAC 59.374 43.478 19.41 0.00 0.00 3.32
268 275 5.235186 CACTTTAAGACTGGAACACACAGAG 59.765 44.000 0.00 0.00 39.24 3.35
284 291 6.041511 CACACAGAGAACTGATATCCTTGAG 58.958 44.000 0.00 0.00 46.03 3.02
290 297 8.430805 CAGAGAACTGATATCCTTGAGGAATGC 61.431 44.444 3.45 0.00 46.02 3.56
320 327 9.513906 TTTTGTTGTTGTTGGAGATGATAGATA 57.486 29.630 0.00 0.00 0.00 1.98
387 394 7.984422 TCCATTAATGCGAAGATCACATTAT 57.016 32.000 10.11 0.00 33.16 1.28
477 492 8.973835 TTAAATTTATAGACCAACAAAAGGCG 57.026 30.769 0.00 0.00 0.00 5.52
530 545 3.624410 TCAGGAATGCGAAGATCACATTG 59.376 43.478 7.68 0.00 30.16 2.82
537 552 7.864379 GGAATGCGAAGATCACATTGAATTTAT 59.136 33.333 7.68 0.00 30.16 1.40
543 558 8.217115 CGAAGATCACATTGAATTTATAGACCG 58.783 37.037 0.00 0.00 0.00 4.79
630 646 7.595819 AGAACAACTTTGTCCCATTTAATGA 57.404 32.000 6.50 0.00 41.31 2.57
650 666 3.822735 TGAAGTGGCATCCAAGAAGAAAG 59.177 43.478 0.00 0.00 34.18 2.62
710 736 3.557595 CCATCGAGGAATAAGAAGCACAC 59.442 47.826 0.00 0.00 41.22 3.82
737 763 8.986477 AATAAGCAACCATGTTCAAATTACTC 57.014 30.769 0.00 0.00 0.00 2.59
924 964 1.081094 GGTATGCTTACGGCGTGTTT 58.919 50.000 24.86 5.43 45.43 2.83
1011 1051 3.635191 TGGGTGATGTGCGAGCCA 61.635 61.111 0.00 0.00 37.40 4.75
1103 1143 2.223479 ACAACAACGATCCTGTTTGCAC 60.223 45.455 5.33 0.00 34.80 4.57
1114 1154 0.256177 TGTTTGCACCACACCCTACA 59.744 50.000 0.00 0.00 0.00 2.74
1260 1300 3.439513 TTGCGCACACTCGTCCACT 62.440 57.895 11.12 0.00 0.00 4.00
1286 1326 2.092158 TCCACAATGACAACACCCTTGA 60.092 45.455 0.00 0.00 0.00 3.02
1344 1384 0.106268 TGACACAACTTGGTGGGCAT 60.106 50.000 0.00 0.00 43.08 4.40
1348 1388 2.200930 AACTTGGTGGGCATGCCA 59.799 55.556 36.56 20.63 37.98 4.92
1350 1390 2.283388 CTTGGTGGGCATGCCAGT 60.283 61.111 36.56 0.00 36.00 4.00
1375 1415 1.003051 TTCTCCTACTGCCTCCCCC 59.997 63.158 0.00 0.00 0.00 5.40
1400 1440 2.417257 CCGTGCACAATCCCCATGG 61.417 63.158 18.64 4.14 0.00 3.66
1401 1441 2.894919 GTGCACAATCCCCATGGC 59.105 61.111 13.17 0.00 0.00 4.40
1402 1442 1.683365 GTGCACAATCCCCATGGCT 60.683 57.895 13.17 0.00 0.00 4.75
1403 1443 1.380246 TGCACAATCCCCATGGCTC 60.380 57.895 6.09 0.00 0.00 4.70
1404 1444 2.129785 GCACAATCCCCATGGCTCC 61.130 63.158 6.09 0.00 0.00 4.70
1405 1445 1.456331 CACAATCCCCATGGCTCCC 60.456 63.158 6.09 0.00 0.00 4.30
1406 1446 1.623686 ACAATCCCCATGGCTCCCT 60.624 57.895 6.09 0.00 0.00 4.20
1407 1447 1.152368 CAATCCCCATGGCTCCCTC 59.848 63.158 6.09 0.00 0.00 4.30
1408 1448 1.006631 AATCCCCATGGCTCCCTCT 59.993 57.895 6.09 0.00 0.00 3.69
1409 1449 0.628668 AATCCCCATGGCTCCCTCTT 60.629 55.000 6.09 0.00 0.00 2.85
1410 1450 0.628668 ATCCCCATGGCTCCCTCTTT 60.629 55.000 6.09 0.00 0.00 2.52
1411 1451 1.228510 CCCCATGGCTCCCTCTTTC 59.771 63.158 6.09 0.00 0.00 2.62
1412 1452 1.284841 CCCCATGGCTCCCTCTTTCT 61.285 60.000 6.09 0.00 0.00 2.52
1413 1453 0.182299 CCCATGGCTCCCTCTTTCTC 59.818 60.000 6.09 0.00 0.00 2.87
1414 1454 0.179062 CCATGGCTCCCTCTTTCTCG 60.179 60.000 0.00 0.00 0.00 4.04
1415 1455 0.179062 CATGGCTCCCTCTTTCTCGG 60.179 60.000 0.00 0.00 0.00 4.63
1416 1456 1.977293 ATGGCTCCCTCTTTCTCGGC 61.977 60.000 0.00 0.00 0.00 5.54
1417 1457 2.202810 GCTCCCTCTTTCTCGGCG 60.203 66.667 0.00 0.00 0.00 6.46
1418 1458 2.202810 CTCCCTCTTTCTCGGCGC 60.203 66.667 0.00 0.00 0.00 6.53
1419 1459 3.724914 CTCCCTCTTTCTCGGCGCC 62.725 68.421 19.07 19.07 0.00 6.53
1420 1460 4.082523 CCCTCTTTCTCGGCGCCA 62.083 66.667 28.98 12.94 0.00 5.69
1421 1461 2.047274 CCTCTTTCTCGGCGCCAA 60.047 61.111 28.98 7.25 0.00 4.52
1422 1462 2.391389 CCTCTTTCTCGGCGCCAAC 61.391 63.158 28.98 0.00 0.00 3.77
1423 1463 2.730672 CTCTTTCTCGGCGCCAACG 61.731 63.158 28.98 13.22 44.07 4.10
1424 1464 3.041940 CTTTCTCGGCGCCAACGT 61.042 61.111 28.98 0.00 42.83 3.99
1425 1465 3.011760 CTTTCTCGGCGCCAACGTC 62.012 63.158 28.98 0.00 42.83 4.34
1434 1474 4.660938 GCCAACGTCCCAAGCCCT 62.661 66.667 0.00 0.00 0.00 5.19
1435 1475 2.359975 CCAACGTCCCAAGCCCTC 60.360 66.667 0.00 0.00 0.00 4.30
1436 1476 2.359975 CAACGTCCCAAGCCCTCC 60.360 66.667 0.00 0.00 0.00 4.30
1437 1477 4.016706 AACGTCCCAAGCCCTCCG 62.017 66.667 0.00 0.00 0.00 4.63
1457 1497 2.983030 GCATGCCCACACGACCAA 60.983 61.111 6.36 0.00 0.00 3.67
1458 1498 2.953821 CATGCCCACACGACCAAC 59.046 61.111 0.00 0.00 0.00 3.77
1459 1499 2.282180 ATGCCCACACGACCAACC 60.282 61.111 0.00 0.00 0.00 3.77
1460 1500 2.829384 ATGCCCACACGACCAACCT 61.829 57.895 0.00 0.00 0.00 3.50
1461 1501 2.668550 GCCCACACGACCAACCTC 60.669 66.667 0.00 0.00 0.00 3.85
1462 1502 2.357034 CCCACACGACCAACCTCG 60.357 66.667 0.00 0.00 39.68 4.63
1464 1504 1.663702 CCACACGACCAACCTCGTC 60.664 63.158 0.00 0.00 45.09 4.20
1465 1505 1.066752 CACACGACCAACCTCGTCA 59.933 57.895 0.00 0.00 45.09 4.35
1466 1506 0.319555 CACACGACCAACCTCGTCAT 60.320 55.000 0.00 0.00 45.09 3.06
1467 1507 1.068125 CACACGACCAACCTCGTCATA 60.068 52.381 0.00 0.00 45.09 2.15
1468 1508 1.068055 ACACGACCAACCTCGTCATAC 60.068 52.381 0.00 0.00 45.09 2.39
1469 1509 0.169672 ACGACCAACCTCGTCATACG 59.830 55.000 0.00 0.00 43.43 3.06
1470 1510 0.169672 CGACCAACCTCGTCATACGT 59.830 55.000 0.00 0.00 43.14 3.57
1471 1511 1.792993 CGACCAACCTCGTCATACGTC 60.793 57.143 0.00 0.00 43.14 4.34
1472 1512 0.529378 ACCAACCTCGTCATACGTCC 59.471 55.000 0.00 0.00 43.14 4.79
1473 1513 0.179119 CCAACCTCGTCATACGTCCC 60.179 60.000 0.00 0.00 43.14 4.46
1474 1514 0.524816 CAACCTCGTCATACGTCCCG 60.525 60.000 0.00 0.00 43.14 5.14
1475 1515 1.660560 AACCTCGTCATACGTCCCGG 61.661 60.000 0.00 0.00 43.14 5.73
1476 1516 2.025727 CTCGTCATACGTCCCGGC 59.974 66.667 0.00 0.00 43.14 6.13
1477 1517 3.802008 CTCGTCATACGTCCCGGCG 62.802 68.421 0.00 0.00 43.14 6.46
1479 1519 2.278401 GTCATACGTCCCGGCGTC 60.278 66.667 10.50 0.00 44.55 5.19
1480 1520 2.438975 TCATACGTCCCGGCGTCT 60.439 61.111 10.50 0.00 44.55 4.18
1481 1521 2.025727 CATACGTCCCGGCGTCTC 59.974 66.667 10.50 0.00 44.55 3.36
1482 1522 3.580193 ATACGTCCCGGCGTCTCG 61.580 66.667 10.50 9.62 44.55 4.04
1491 1531 4.509737 GGCGTCTCGGGCTACCAC 62.510 72.222 0.00 0.00 36.13 4.16
1492 1532 4.509737 GCGTCTCGGGCTACCACC 62.510 72.222 0.00 0.00 36.13 4.61
1493 1533 2.754658 CGTCTCGGGCTACCACCT 60.755 66.667 0.00 0.00 36.13 4.00
1494 1534 2.772691 CGTCTCGGGCTACCACCTC 61.773 68.421 0.00 0.00 36.13 3.85
1495 1535 1.681327 GTCTCGGGCTACCACCTCA 60.681 63.158 0.00 0.00 36.13 3.86
1496 1536 1.077805 TCTCGGGCTACCACCTCAA 59.922 57.895 0.00 0.00 36.13 3.02
1497 1537 1.218316 CTCGGGCTACCACCTCAAC 59.782 63.158 0.00 0.00 36.13 3.18
1498 1538 2.240162 CTCGGGCTACCACCTCAACC 62.240 65.000 0.00 0.00 36.13 3.77
1499 1539 2.291043 CGGGCTACCACCTCAACCT 61.291 63.158 0.00 0.00 36.13 3.50
1500 1540 1.602771 GGGCTACCACCTCAACCTC 59.397 63.158 0.00 0.00 36.50 3.85
1501 1541 1.218316 GGCTACCACCTCAACCTCG 59.782 63.158 0.00 0.00 0.00 4.63
1502 1542 1.542187 GGCTACCACCTCAACCTCGT 61.542 60.000 0.00 0.00 0.00 4.18
1503 1543 0.108756 GCTACCACCTCAACCTCGTC 60.109 60.000 0.00 0.00 0.00 4.20
1504 1544 0.170561 CTACCACCTCAACCTCGTCG 59.829 60.000 0.00 0.00 0.00 5.12
1505 1545 1.246056 TACCACCTCAACCTCGTCGG 61.246 60.000 0.00 0.00 39.35 4.79
1506 1546 2.432628 CACCTCAACCTCGTCGGC 60.433 66.667 0.00 0.00 35.61 5.54
1507 1547 2.915659 ACCTCAACCTCGTCGGCA 60.916 61.111 0.00 0.00 35.61 5.69
1508 1548 2.283529 ACCTCAACCTCGTCGGCAT 61.284 57.895 0.00 0.00 35.61 4.40
1509 1549 1.519455 CCTCAACCTCGTCGGCATC 60.519 63.158 0.00 0.00 35.61 3.91
1510 1550 1.215382 CTCAACCTCGTCGGCATCA 59.785 57.895 0.00 0.00 35.61 3.07
1511 1551 1.078759 CTCAACCTCGTCGGCATCAC 61.079 60.000 0.00 0.00 35.61 3.06
1512 1552 2.100631 CAACCTCGTCGGCATCACC 61.101 63.158 0.00 0.00 35.61 4.02
1513 1553 3.310860 AACCTCGTCGGCATCACCC 62.311 63.158 0.00 0.00 35.61 4.61
1514 1554 3.461773 CCTCGTCGGCATCACCCT 61.462 66.667 0.00 0.00 33.26 4.34
1515 1555 2.125326 CCTCGTCGGCATCACCCTA 61.125 63.158 0.00 0.00 33.26 3.53
1516 1556 1.360551 CTCGTCGGCATCACCCTAG 59.639 63.158 0.00 0.00 33.26 3.02
1517 1557 2.076622 CTCGTCGGCATCACCCTAGG 62.077 65.000 0.06 0.06 33.26 3.02
1518 1558 2.822399 GTCGGCATCACCCTAGGG 59.178 66.667 27.36 27.36 42.03 3.53
1529 1569 2.897699 CCCTAGGGTACAAGCGTCT 58.102 57.895 20.88 0.00 0.00 4.18
1530 1570 0.745468 CCCTAGGGTACAAGCGTCTC 59.255 60.000 20.88 0.00 0.00 3.36
1531 1571 1.471119 CCTAGGGTACAAGCGTCTCA 58.529 55.000 0.00 0.00 0.00 3.27
1532 1572 1.822990 CCTAGGGTACAAGCGTCTCAA 59.177 52.381 0.00 0.00 0.00 3.02
1533 1573 2.159226 CCTAGGGTACAAGCGTCTCAAG 60.159 54.545 0.00 0.00 0.00 3.02
1534 1574 1.629043 AGGGTACAAGCGTCTCAAGA 58.371 50.000 0.00 0.00 0.00 3.02
1535 1575 2.180276 AGGGTACAAGCGTCTCAAGAT 58.820 47.619 0.00 0.00 0.00 2.40
1536 1576 2.166664 AGGGTACAAGCGTCTCAAGATC 59.833 50.000 0.00 0.00 0.00 2.75
1537 1577 2.186076 GGTACAAGCGTCTCAAGATCG 58.814 52.381 0.00 0.00 0.00 3.69
1538 1578 2.159421 GGTACAAGCGTCTCAAGATCGA 60.159 50.000 0.00 0.00 0.00 3.59
1539 1579 1.983972 ACAAGCGTCTCAAGATCGAC 58.016 50.000 0.00 0.00 0.00 4.20
1540 1580 1.269723 ACAAGCGTCTCAAGATCGACA 59.730 47.619 0.00 0.00 0.00 4.35
1541 1581 2.288213 ACAAGCGTCTCAAGATCGACAA 60.288 45.455 0.00 0.00 0.00 3.18
1542 1582 2.270275 AGCGTCTCAAGATCGACAAG 57.730 50.000 0.00 0.00 0.00 3.16
1543 1583 0.642800 GCGTCTCAAGATCGACAAGC 59.357 55.000 0.00 0.00 0.00 4.01
1544 1584 0.910513 CGTCTCAAGATCGACAAGCG 59.089 55.000 0.00 0.00 42.69 4.68
1545 1585 0.642800 GTCTCAAGATCGACAAGCGC 59.357 55.000 0.00 0.00 40.61 5.92
1546 1586 0.798389 TCTCAAGATCGACAAGCGCG 60.798 55.000 0.00 0.00 40.61 6.86
1547 1587 1.073216 CTCAAGATCGACAAGCGCGT 61.073 55.000 8.43 0.00 40.61 6.01
1548 1588 1.071019 TCAAGATCGACAAGCGCGTC 61.071 55.000 8.43 3.15 40.61 5.19
1549 1589 1.073216 CAAGATCGACAAGCGCGTCT 61.073 55.000 8.43 1.94 40.61 4.18
1550 1590 0.388649 AAGATCGACAAGCGCGTCTT 60.389 50.000 8.43 9.08 38.74 3.01
1551 1591 0.798771 AGATCGACAAGCGCGTCTTC 60.799 55.000 8.43 9.48 40.61 2.87
1552 1592 2.056087 GATCGACAAGCGCGTCTTCG 62.056 60.000 15.05 15.05 40.61 3.79
1553 1593 2.523184 ATCGACAAGCGCGTCTTCGA 62.523 55.000 22.61 22.61 40.61 3.71
1554 1594 2.763881 GACAAGCGCGTCTTCGAC 59.236 61.111 8.43 4.24 39.71 4.20
1563 1603 2.338984 GTCTTCGACGGCCACAGT 59.661 61.111 2.24 0.00 0.00 3.55
1564 1604 1.300697 GTCTTCGACGGCCACAGTT 60.301 57.895 2.24 0.00 0.00 3.16
1565 1605 1.300620 TCTTCGACGGCCACAGTTG 60.301 57.895 2.24 0.00 0.00 3.16
1566 1606 2.954753 CTTCGACGGCCACAGTTGC 61.955 63.158 2.24 0.00 0.00 4.17
1567 1607 3.741830 TTCGACGGCCACAGTTGCA 62.742 57.895 2.24 0.00 0.00 4.08
1568 1608 3.716006 CGACGGCCACAGTTGCAG 61.716 66.667 2.24 0.00 0.00 4.41
1569 1609 4.030452 GACGGCCACAGTTGCAGC 62.030 66.667 2.24 0.00 0.00 5.25
1570 1610 4.873810 ACGGCCACAGTTGCAGCA 62.874 61.111 2.24 0.00 0.00 4.41
1571 1611 3.367743 CGGCCACAGTTGCAGCAT 61.368 61.111 2.24 0.00 0.00 3.79
1572 1612 2.570181 GGCCACAGTTGCAGCATC 59.430 61.111 2.55 0.00 0.00 3.91
1573 1613 2.270257 GGCCACAGTTGCAGCATCA 61.270 57.895 2.55 0.00 0.00 3.07
1574 1614 1.661480 GCCACAGTTGCAGCATCAA 59.339 52.632 2.55 0.00 0.00 2.57
1575 1615 0.665369 GCCACAGTTGCAGCATCAAC 60.665 55.000 2.55 11.65 44.88 3.18
1576 1616 0.038892 CCACAGTTGCAGCATCAACC 60.039 55.000 14.80 1.68 45.47 3.77
1577 1617 0.038892 CACAGTTGCAGCATCAACCC 60.039 55.000 14.80 0.00 45.47 4.11
1578 1618 0.467844 ACAGTTGCAGCATCAACCCA 60.468 50.000 14.80 0.00 45.47 4.51
1579 1619 0.242825 CAGTTGCAGCATCAACCCAG 59.757 55.000 14.80 5.04 45.47 4.45
1580 1620 1.080298 GTTGCAGCATCAACCCAGC 60.080 57.895 0.00 0.00 40.18 4.85
1581 1621 2.628696 TTGCAGCATCAACCCAGCG 61.629 57.895 0.00 0.00 0.00 5.18
1582 1622 3.818787 GCAGCATCAACCCAGCGG 61.819 66.667 0.00 0.00 0.00 5.52
1583 1623 2.046023 CAGCATCAACCCAGCGGA 60.046 61.111 0.00 0.00 0.00 5.54
1584 1624 2.110967 CAGCATCAACCCAGCGGAG 61.111 63.158 0.00 0.00 0.00 4.63
1585 1625 2.268920 GCATCAACCCAGCGGAGA 59.731 61.111 0.00 0.00 0.00 3.71
1586 1626 2.109126 GCATCAACCCAGCGGAGAC 61.109 63.158 0.00 0.00 0.00 3.36
1587 1627 1.450312 CATCAACCCAGCGGAGACC 60.450 63.158 0.00 0.00 0.00 3.85
1588 1628 1.918293 ATCAACCCAGCGGAGACCA 60.918 57.895 0.00 0.00 0.00 4.02
1589 1629 1.274703 ATCAACCCAGCGGAGACCAT 61.275 55.000 0.00 0.00 0.00 3.55
1590 1630 1.450312 CAACCCAGCGGAGACCATC 60.450 63.158 0.00 0.00 0.00 3.51
1591 1631 1.918293 AACCCAGCGGAGACCATCA 60.918 57.895 0.00 0.00 0.00 3.07
1592 1632 2.185310 AACCCAGCGGAGACCATCAC 62.185 60.000 0.00 0.00 0.00 3.06
1593 1633 2.659063 CCCAGCGGAGACCATCACA 61.659 63.158 0.00 0.00 0.00 3.58
1594 1634 1.448540 CCAGCGGAGACCATCACAC 60.449 63.158 0.00 0.00 0.00 3.82
1595 1635 1.293179 CAGCGGAGACCATCACACA 59.707 57.895 0.00 0.00 0.00 3.72
1596 1636 0.107993 CAGCGGAGACCATCACACAT 60.108 55.000 0.00 0.00 0.00 3.21
1597 1637 0.615331 AGCGGAGACCATCACACATT 59.385 50.000 0.00 0.00 0.00 2.71
1598 1638 1.003580 AGCGGAGACCATCACACATTT 59.996 47.619 0.00 0.00 0.00 2.32
1599 1639 1.398390 GCGGAGACCATCACACATTTC 59.602 52.381 0.00 0.00 0.00 2.17
1600 1640 1.660607 CGGAGACCATCACACATTTCG 59.339 52.381 0.00 0.00 0.00 3.46
1601 1641 1.398390 GGAGACCATCACACATTTCGC 59.602 52.381 0.00 0.00 0.00 4.70
1602 1642 1.061131 GAGACCATCACACATTTCGCG 59.939 52.381 0.00 0.00 0.00 5.87
1603 1643 0.096976 GACCATCACACATTTCGCGG 59.903 55.000 6.13 0.00 0.00 6.46
1604 1644 0.321210 ACCATCACACATTTCGCGGA 60.321 50.000 6.13 0.00 0.00 5.54
1605 1645 0.374758 CCATCACACATTTCGCGGAG 59.625 55.000 6.13 0.00 0.00 4.63
1620 1660 2.349297 CGGAGCCGATATACCTTGTC 57.651 55.000 2.00 0.00 42.83 3.18
1621 1661 1.401148 CGGAGCCGATATACCTTGTCG 60.401 57.143 2.00 0.00 42.83 4.35
1622 1662 1.612463 GGAGCCGATATACCTTGTCGT 59.388 52.381 0.00 0.00 33.77 4.34
1623 1663 2.607282 GGAGCCGATATACCTTGTCGTG 60.607 54.545 0.00 0.00 33.77 4.35
1624 1664 1.340248 AGCCGATATACCTTGTCGTGG 59.660 52.381 0.00 0.00 33.77 4.94
1625 1665 1.338973 GCCGATATACCTTGTCGTGGA 59.661 52.381 0.00 0.00 33.77 4.02
1626 1666 2.223876 GCCGATATACCTTGTCGTGGAA 60.224 50.000 0.00 0.00 33.77 3.53
1627 1667 3.738899 GCCGATATACCTTGTCGTGGAAA 60.739 47.826 0.00 0.00 33.77 3.13
1628 1668 4.435425 CCGATATACCTTGTCGTGGAAAA 58.565 43.478 0.00 0.00 33.77 2.29
1629 1669 4.871557 CCGATATACCTTGTCGTGGAAAAA 59.128 41.667 0.00 0.00 33.77 1.94
1630 1670 5.006358 CCGATATACCTTGTCGTGGAAAAAG 59.994 44.000 0.00 0.00 33.77 2.27
1631 1671 5.501897 CGATATACCTTGTCGTGGAAAAAGC 60.502 44.000 0.00 0.00 0.00 3.51
1632 1672 1.757682 ACCTTGTCGTGGAAAAAGCA 58.242 45.000 0.00 0.00 0.00 3.91
1633 1673 2.306847 ACCTTGTCGTGGAAAAAGCAT 58.693 42.857 0.00 0.00 0.00 3.79
1634 1674 2.693074 ACCTTGTCGTGGAAAAAGCATT 59.307 40.909 0.00 0.00 0.00 3.56
1635 1675 3.052036 CCTTGTCGTGGAAAAAGCATTG 58.948 45.455 0.00 0.00 0.00 2.82
1636 1676 2.791383 TGTCGTGGAAAAAGCATTGG 57.209 45.000 0.00 0.00 0.00 3.16
1637 1677 2.028130 TGTCGTGGAAAAAGCATTGGT 58.972 42.857 0.00 0.00 0.00 3.67
1638 1678 2.223688 TGTCGTGGAAAAAGCATTGGTG 60.224 45.455 0.00 0.00 0.00 4.17
1639 1679 1.339610 TCGTGGAAAAAGCATTGGTGG 59.660 47.619 0.00 0.00 0.00 4.61
1640 1680 1.511850 GTGGAAAAAGCATTGGTGGC 58.488 50.000 0.00 0.00 0.00 5.01
1641 1681 0.033228 TGGAAAAAGCATTGGTGGCG 59.967 50.000 0.00 0.00 36.08 5.69
1642 1682 1.291184 GGAAAAAGCATTGGTGGCGC 61.291 55.000 0.00 0.00 36.08 6.53
1643 1683 1.616872 GAAAAAGCATTGGTGGCGCG 61.617 55.000 0.00 0.00 36.08 6.86
1644 1684 4.722855 AAAGCATTGGTGGCGCGC 62.723 61.111 25.94 25.94 36.08 6.86
1648 1688 3.813143 CATTGGTGGCGCGCATGA 61.813 61.111 34.42 13.49 0.00 3.07
1649 1689 3.061231 ATTGGTGGCGCGCATGAA 61.061 55.556 34.42 19.11 0.00 2.57
1650 1690 3.055080 ATTGGTGGCGCGCATGAAG 62.055 57.895 34.42 0.00 0.00 3.02
1653 1693 3.869272 GTGGCGCGCATGAAGGAG 61.869 66.667 34.42 0.00 0.00 3.69
1656 1696 2.586079 GCGCGCATGAAGGAGCTA 60.586 61.111 29.10 0.00 0.00 3.32
1657 1697 2.593134 GCGCGCATGAAGGAGCTAG 61.593 63.158 29.10 0.00 0.00 3.42
1658 1698 1.953138 CGCGCATGAAGGAGCTAGG 60.953 63.158 8.75 0.00 0.00 3.02
1659 1699 1.596477 GCGCATGAAGGAGCTAGGG 60.596 63.158 0.30 0.00 0.00 3.53
1660 1700 1.826024 CGCATGAAGGAGCTAGGGT 59.174 57.895 0.00 0.00 0.00 4.34
1725 1765 2.607635 CCGGATGTACAAATCGGTGAAG 59.392 50.000 19.94 2.43 0.00 3.02
1815 1855 1.514678 TTGAGGTGCACGGCATGAAC 61.515 55.000 11.45 0.00 41.91 3.18
1819 1859 3.282920 TGCACGGCATGAACGCAA 61.283 55.556 9.72 0.00 31.71 4.85
1947 1987 1.080434 GGAGGTGTGCGACTGAGAC 60.080 63.158 0.00 0.00 0.00 3.36
1949 1989 2.430921 GGTGTGCGACTGAGACGG 60.431 66.667 6.45 0.00 0.00 4.79
1986 2031 4.919754 GCTTTGTTCTTGCTGTATTTCAGG 59.080 41.667 0.00 0.00 43.78 3.86
2029 2074 7.806487 GCATTCATATATCATATTGCCGAATGG 59.194 37.037 13.89 0.00 38.28 3.16
2042 2087 3.420839 CCGAATGGCCAGTGTTATTTC 57.579 47.619 12.17 6.68 0.00 2.17
2043 2088 2.099098 CCGAATGGCCAGTGTTATTTCC 59.901 50.000 12.17 0.00 0.00 3.13
2044 2089 2.752354 CGAATGGCCAGTGTTATTTCCA 59.248 45.455 12.17 0.00 0.00 3.53
2045 2090 3.192422 CGAATGGCCAGTGTTATTTCCAA 59.808 43.478 12.17 0.00 0.00 3.53
2046 2091 4.494484 GAATGGCCAGTGTTATTTCCAAC 58.506 43.478 12.17 0.00 0.00 3.77
2047 2092 3.237268 TGGCCAGTGTTATTTCCAACT 57.763 42.857 0.00 0.00 0.00 3.16
2048 2093 3.571590 TGGCCAGTGTTATTTCCAACTT 58.428 40.909 0.00 0.00 0.00 2.66
2049 2094 3.964031 TGGCCAGTGTTATTTCCAACTTT 59.036 39.130 0.00 0.00 0.00 2.66
2050 2095 4.407296 TGGCCAGTGTTATTTCCAACTTTT 59.593 37.500 0.00 0.00 0.00 2.27
2051 2096 5.104735 TGGCCAGTGTTATTTCCAACTTTTT 60.105 36.000 0.00 0.00 0.00 1.94
2083 2128 4.202050 ACAGTGTCATTTCCAACTTGAAGC 60.202 41.667 0.00 0.00 0.00 3.86
2153 2620 4.130118 GCAGCTATGTAGGCACTATTGTT 58.870 43.478 0.00 0.00 45.60 2.83
2154 2621 4.024556 GCAGCTATGTAGGCACTATTGTTG 60.025 45.833 0.00 0.00 45.60 3.33
2155 2622 5.359756 CAGCTATGTAGGCACTATTGTTGA 58.640 41.667 0.00 0.00 45.60 3.18
2156 2623 5.994054 CAGCTATGTAGGCACTATTGTTGAT 59.006 40.000 0.00 0.00 45.60 2.57
2157 2624 6.146837 CAGCTATGTAGGCACTATTGTTGATC 59.853 42.308 0.00 0.00 45.60 2.92
2158 2625 5.991606 GCTATGTAGGCACTATTGTTGATCA 59.008 40.000 0.00 0.00 45.60 2.92
2159 2626 6.652481 GCTATGTAGGCACTATTGTTGATCAT 59.348 38.462 0.00 0.00 45.60 2.45
2160 2627 7.148507 GCTATGTAGGCACTATTGTTGATCATC 60.149 40.741 0.00 0.00 45.60 2.92
2161 2628 5.988287 TGTAGGCACTATTGTTGATCATCA 58.012 37.500 2.22 2.22 45.60 3.07
2162 2629 6.594744 TGTAGGCACTATTGTTGATCATCAT 58.405 36.000 7.29 0.00 45.60 2.45
2163 2630 7.056006 TGTAGGCACTATTGTTGATCATCATT 58.944 34.615 7.29 6.82 45.60 2.57
2164 2631 7.557358 TGTAGGCACTATTGTTGATCATCATTT 59.443 33.333 7.29 1.99 45.60 2.32
2165 2632 6.802608 AGGCACTATTGTTGATCATCATTTG 58.197 36.000 7.29 7.65 36.02 2.32
2166 2633 6.604396 AGGCACTATTGTTGATCATCATTTGA 59.396 34.615 7.29 0.00 36.02 2.69
2167 2634 7.287005 AGGCACTATTGTTGATCATCATTTGAT 59.713 33.333 7.29 1.42 42.94 2.57
2184 2651 4.944962 TTGATCGTCAAATTGGCACTAG 57.055 40.909 0.00 0.00 32.71 2.57
2185 2652 2.677836 TGATCGTCAAATTGGCACTAGC 59.322 45.455 0.00 0.00 41.10 3.42
2252 2719 7.128234 TGCCATATATAATGCTCTAGATGCA 57.872 36.000 15.99 15.99 44.95 3.96
2324 2822 9.850628 ATTGATCATGATTGACAAGTTTAACTG 57.149 29.630 10.14 0.00 33.85 3.16
2363 2861 2.921834 AGAGTTGGCCTAGTGGAGTA 57.078 50.000 3.32 0.00 34.57 2.59
2383 2881 2.875296 AGCTGGGTTGTGCAAATCTTA 58.125 42.857 0.00 0.00 0.00 2.10
2416 2914 2.159421 CCGAGCACTATACTTGTCGTGT 60.159 50.000 0.00 0.00 0.00 4.49
2420 2918 3.380637 AGCACTATACTTGTCGTGTAGGG 59.619 47.826 0.00 0.00 41.97 3.53
2426 2924 3.107642 ACTTGTCGTGTAGGGAAAGTG 57.892 47.619 0.00 0.00 0.00 3.16
2431 2951 0.395312 CGTGTAGGGAAAGTGGTGGT 59.605 55.000 0.00 0.00 0.00 4.16
2445 2965 4.695014 TGGTTGCACCCACACAAT 57.305 50.000 0.00 0.00 37.50 2.71
2446 2966 2.122527 TGGTTGCACCCACACAATG 58.877 52.632 0.00 0.00 37.50 2.82
2503 3023 6.693315 AAAAAGATTCTGAAACTTCGTGGA 57.307 33.333 12.48 0.00 0.00 4.02
2504 3024 6.884280 AAAAGATTCTGAAACTTCGTGGAT 57.116 33.333 12.48 0.00 0.00 3.41
2505 3025 5.869753 AAGATTCTGAAACTTCGTGGATG 57.130 39.130 7.05 0.00 0.00 3.51
2506 3026 3.686726 AGATTCTGAAACTTCGTGGATGC 59.313 43.478 0.00 0.00 0.00 3.91
2507 3027 1.428448 TCTGAAACTTCGTGGATGCG 58.572 50.000 0.00 0.00 0.00 4.73
2508 3028 1.000394 TCTGAAACTTCGTGGATGCGA 60.000 47.619 0.00 0.00 39.28 5.10
2509 3029 2.002586 CTGAAACTTCGTGGATGCGAT 58.997 47.619 0.00 0.00 40.76 4.58
2510 3030 1.999735 TGAAACTTCGTGGATGCGATC 59.000 47.619 0.00 0.00 40.76 3.69
2511 3031 1.999735 GAAACTTCGTGGATGCGATCA 59.000 47.619 0.00 0.00 40.76 2.92
2512 3032 2.315925 AACTTCGTGGATGCGATCAT 57.684 45.000 0.00 0.00 40.76 2.45
2513 3033 1.575244 ACTTCGTGGATGCGATCATG 58.425 50.000 0.00 0.00 40.76 3.07
2514 3034 1.136891 ACTTCGTGGATGCGATCATGA 59.863 47.619 0.00 0.00 40.76 3.07
2515 3035 1.524355 CTTCGTGGATGCGATCATGAC 59.476 52.381 0.00 0.00 40.76 3.06
2525 3045 5.221028 GGATGCGATCATGACCAAATGTTTA 60.221 40.000 0.00 0.00 31.96 2.01
2533 3053 5.774690 TCATGACCAAATGTTTAAGGAGCTT 59.225 36.000 0.00 0.00 0.00 3.74
2581 3101 7.019774 ACATCGAATGTTCTCCATACAAATG 57.980 36.000 0.00 0.00 41.63 2.32
2582 3102 6.823182 ACATCGAATGTTCTCCATACAAATGA 59.177 34.615 0.00 0.00 41.63 2.57
2583 3103 6.662414 TCGAATGTTCTCCATACAAATGAC 57.338 37.500 0.00 0.00 34.84 3.06
2594 3114 1.237285 ACAAATGACGCTCTGCACCC 61.237 55.000 0.00 0.00 0.00 4.61
2601 3121 0.324943 ACGCTCTGCACCCAAGTTAT 59.675 50.000 0.00 0.00 0.00 1.89
2621 3141 7.436118 AGTTATTGTTCACATGTTTTCAGCAT 58.564 30.769 0.00 0.00 0.00 3.79
2624 3144 9.755804 TTATTGTTCACATGTTTTCAGCATAAA 57.244 25.926 0.00 0.00 0.00 1.40
2625 3145 7.462109 TTGTTCACATGTTTTCAGCATAAAC 57.538 32.000 0.00 0.00 36.32 2.01
2627 3147 7.264221 TGTTCACATGTTTTCAGCATAAACTT 58.736 30.769 0.00 2.06 36.64 2.66
2628 3148 7.763528 TGTTCACATGTTTTCAGCATAAACTTT 59.236 29.630 0.00 0.00 36.64 2.66
2629 3149 7.697352 TCACATGTTTTCAGCATAAACTTTG 57.303 32.000 0.00 8.80 36.64 2.77
2630 3150 7.264221 TCACATGTTTTCAGCATAAACTTTGT 58.736 30.769 0.00 9.23 36.64 2.83
2631 3151 7.763528 TCACATGTTTTCAGCATAAACTTTGTT 59.236 29.630 0.00 0.00 36.64 2.83
2632 3152 8.389603 CACATGTTTTCAGCATAAACTTTGTTT 58.610 29.630 0.00 1.33 36.64 2.83
2633 3153 8.945057 ACATGTTTTCAGCATAAACTTTGTTTT 58.055 25.926 0.00 0.00 36.64 2.43
2634 3154 9.424659 CATGTTTTCAGCATAAACTTTGTTTTC 57.575 29.630 0.94 0.00 36.64 2.29
2654 3174 2.076863 CTTTTTGTACAGAGCTCCCCG 58.923 52.381 10.93 1.56 0.00 5.73
2659 3179 0.468400 GTACAGAGCTCCCCGGATCT 60.468 60.000 10.93 0.00 31.67 2.75
2674 3194 2.659428 GGATCTCATTTCCCCACCAAG 58.341 52.381 0.00 0.00 0.00 3.61
2762 3282 7.048629 TGTTTTGCTAAGTTTTGATCATGGA 57.951 32.000 0.00 0.00 0.00 3.41
2771 3291 1.102809 TTGATCATGGATGCACCGGC 61.103 55.000 0.00 0.00 42.61 6.13
2786 3306 3.443045 GGCGGTGCAATGTCCCTG 61.443 66.667 0.00 0.00 0.00 4.45
2815 3335 2.702592 AAACCAAACTCTGTCGTCCA 57.297 45.000 0.00 0.00 0.00 4.02
2835 3355 4.588951 TCCATAAATACACCGCTGATCTCT 59.411 41.667 0.00 0.00 0.00 3.10
2846 3366 2.270047 GCTGATCTCTCTGTTCACAGC 58.730 52.381 1.74 0.00 43.46 4.40
2857 3377 4.257731 TCTGTTCACAGCACACAAGTAAA 58.742 39.130 1.74 0.00 43.46 2.01
2860 3380 4.216472 TGTTCACAGCACACAAGTAAACAA 59.784 37.500 0.00 0.00 0.00 2.83
2861 3381 4.349663 TCACAGCACACAAGTAAACAAC 57.650 40.909 0.00 0.00 0.00 3.32
2870 3390 2.616842 ACAAGTAAACAACCCAGCTTCG 59.383 45.455 0.00 0.00 0.00 3.79
2878 3398 2.290260 ACAACCCAGCTTCGATCAATGA 60.290 45.455 0.00 0.00 0.00 2.57
2880 3400 1.278985 ACCCAGCTTCGATCAATGACA 59.721 47.619 0.00 0.00 0.00 3.58
2895 3415 4.453478 TCAATGACAGCTCTAAAACAGCAG 59.547 41.667 0.00 0.00 39.56 4.24
2933 3454 7.712205 ACAATTCTCAATCAAAAAGGAAAGGTG 59.288 33.333 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 4.100963 CCCACTACAGCCCTTTTTCTTTTT 59.899 41.667 0.00 0.00 0.00 1.94
7 8 3.641436 CCCACTACAGCCCTTTTTCTTTT 59.359 43.478 0.00 0.00 0.00 2.27
8 9 3.230976 CCCACTACAGCCCTTTTTCTTT 58.769 45.455 0.00 0.00 0.00 2.52
9 10 2.876581 CCCACTACAGCCCTTTTTCTT 58.123 47.619 0.00 0.00 0.00 2.52
10 11 1.547901 GCCCACTACAGCCCTTTTTCT 60.548 52.381 0.00 0.00 0.00 2.52
11 12 0.888619 GCCCACTACAGCCCTTTTTC 59.111 55.000 0.00 0.00 0.00 2.29
12 13 0.541998 GGCCCACTACAGCCCTTTTT 60.542 55.000 0.00 0.00 43.76 1.94
13 14 1.076727 GGCCCACTACAGCCCTTTT 59.923 57.895 0.00 0.00 43.76 2.27
14 15 2.763902 GGCCCACTACAGCCCTTT 59.236 61.111 0.00 0.00 43.76 3.11
18 19 4.468689 GGTCGGCCCACTACAGCC 62.469 72.222 0.00 0.00 46.17 4.85
28 29 3.155167 CCTCCTAGTGGGTCGGCC 61.155 72.222 0.00 0.00 36.25 6.13
29 30 1.551019 AAACCTCCTAGTGGGTCGGC 61.551 60.000 4.63 0.00 34.35 5.54
30 31 0.249398 CAAACCTCCTAGTGGGTCGG 59.751 60.000 4.63 0.00 34.35 4.79
31 32 0.974383 ACAAACCTCCTAGTGGGTCG 59.026 55.000 4.63 2.97 34.35 4.79
32 33 1.278413 GGACAAACCTCCTAGTGGGTC 59.722 57.143 4.63 2.66 34.35 4.46
33 34 1.359168 GGACAAACCTCCTAGTGGGT 58.641 55.000 0.00 1.68 37.44 4.51
34 35 0.249398 CGGACAAACCTCCTAGTGGG 59.751 60.000 4.37 0.00 36.31 4.61
35 36 0.974383 ACGGACAAACCTCCTAGTGG 59.026 55.000 0.00 0.00 36.31 4.00
36 37 1.893801 AGACGGACAAACCTCCTAGTG 59.106 52.381 0.00 0.00 36.31 2.74
37 38 2.299297 CAAGACGGACAAACCTCCTAGT 59.701 50.000 0.00 0.00 36.31 2.57
38 39 2.931320 GCAAGACGGACAAACCTCCTAG 60.931 54.545 0.00 0.00 36.31 3.02
39 40 1.001633 GCAAGACGGACAAACCTCCTA 59.998 52.381 0.00 0.00 36.31 2.94
40 41 0.250338 GCAAGACGGACAAACCTCCT 60.250 55.000 0.00 0.00 36.31 3.69
41 42 0.534203 TGCAAGACGGACAAACCTCC 60.534 55.000 0.00 0.00 36.31 4.30
42 43 0.586802 GTGCAAGACGGACAAACCTC 59.413 55.000 0.00 0.00 35.67 3.85
43 44 1.157870 CGTGCAAGACGGACAAACCT 61.158 55.000 0.00 0.00 44.85 3.50
44 45 1.278637 CGTGCAAGACGGACAAACC 59.721 57.895 0.00 0.00 44.85 3.27
45 46 4.893241 CGTGCAAGACGGACAAAC 57.107 55.556 0.00 0.00 44.85 2.93
55 56 4.170062 CATCTGGCCGCGTGCAAG 62.170 66.667 18.87 17.13 42.99 4.01
56 57 4.695993 TCATCTGGCCGCGTGCAA 62.696 61.111 18.87 8.88 43.89 4.08
66 67 4.899239 GAGGGGCGCGTCATCTGG 62.899 72.222 14.93 0.00 0.00 3.86
67 68 3.842923 AGAGGGGCGCGTCATCTG 61.843 66.667 23.15 0.00 0.00 2.90
68 69 3.842923 CAGAGGGGCGCGTCATCT 61.843 66.667 23.15 12.87 0.00 2.90
69 70 3.665675 AACAGAGGGGCGCGTCATC 62.666 63.158 23.15 10.38 0.00 2.92
70 71 3.254024 AAACAGAGGGGCGCGTCAT 62.254 57.895 23.15 0.00 0.00 3.06
71 72 3.936203 AAACAGAGGGGCGCGTCA 61.936 61.111 23.15 0.00 0.00 4.35
72 73 3.423154 CAAACAGAGGGGCGCGTC 61.423 66.667 14.97 14.97 0.00 5.19
75 76 3.435186 GAGCAAACAGAGGGGCGC 61.435 66.667 0.00 0.00 0.00 6.53
76 77 2.037136 CAGAGCAAACAGAGGGGCG 61.037 63.158 0.00 0.00 0.00 6.13
77 78 2.338785 GCAGAGCAAACAGAGGGGC 61.339 63.158 0.00 0.00 0.00 5.80
78 79 1.073722 TGCAGAGCAAACAGAGGGG 59.926 57.895 0.00 0.00 34.76 4.79
79 80 0.535780 TGTGCAGAGCAAACAGAGGG 60.536 55.000 0.00 0.00 41.47 4.30
80 81 1.199327 CATGTGCAGAGCAAACAGAGG 59.801 52.381 0.00 0.00 41.47 3.69
81 82 1.878088 ACATGTGCAGAGCAAACAGAG 59.122 47.619 0.00 0.00 41.47 3.35
82 83 1.605232 CACATGTGCAGAGCAAACAGA 59.395 47.619 13.94 0.00 41.47 3.41
83 84 2.046283 CACATGTGCAGAGCAAACAG 57.954 50.000 13.94 0.00 41.47 3.16
95 96 5.398603 TTTTATTTACCCCAGCACATGTG 57.601 39.130 21.83 21.83 0.00 3.21
135 136 9.838339 ACTGAGATTATATTTAGTGGGAAACTG 57.162 33.333 0.00 0.00 40.26 3.16
181 182 8.080417 GGTTTGAGATTAAGGTTTAAACTGACC 58.920 37.037 17.50 2.05 36.15 4.02
182 183 8.626526 TGGTTTGAGATTAAGGTTTAAACTGAC 58.373 33.333 17.50 1.88 0.00 3.51
183 184 8.754991 TGGTTTGAGATTAAGGTTTAAACTGA 57.245 30.769 17.50 1.29 0.00 3.41
184 185 9.981114 ATTGGTTTGAGATTAAGGTTTAAACTG 57.019 29.630 17.50 0.00 0.00 3.16
186 187 9.974980 TGATTGGTTTGAGATTAAGGTTTAAAC 57.025 29.630 9.98 9.98 0.00 2.01
187 188 9.974980 GTGATTGGTTTGAGATTAAGGTTTAAA 57.025 29.630 0.00 0.00 0.00 1.52
188 189 9.362151 AGTGATTGGTTTGAGATTAAGGTTTAA 57.638 29.630 0.00 0.00 0.00 1.52
189 190 8.934023 AGTGATTGGTTTGAGATTAAGGTTTA 57.066 30.769 0.00 0.00 0.00 2.01
190 191 7.839680 AGTGATTGGTTTGAGATTAAGGTTT 57.160 32.000 0.00 0.00 0.00 3.27
191 192 8.934023 TTAGTGATTGGTTTGAGATTAAGGTT 57.066 30.769 0.00 0.00 0.00 3.50
192 193 8.934023 TTTAGTGATTGGTTTGAGATTAAGGT 57.066 30.769 0.00 0.00 0.00 3.50
195 196 9.691362 GCTTTTTAGTGATTGGTTTGAGATTAA 57.309 29.630 0.00 0.00 0.00 1.40
196 197 9.077885 AGCTTTTTAGTGATTGGTTTGAGATTA 57.922 29.630 0.00 0.00 0.00 1.75
197 198 7.955918 AGCTTTTTAGTGATTGGTTTGAGATT 58.044 30.769 0.00 0.00 0.00 2.40
198 199 7.231317 TGAGCTTTTTAGTGATTGGTTTGAGAT 59.769 33.333 0.00 0.00 0.00 2.75
199 200 6.545666 TGAGCTTTTTAGTGATTGGTTTGAGA 59.454 34.615 0.00 0.00 0.00 3.27
200 201 6.738114 TGAGCTTTTTAGTGATTGGTTTGAG 58.262 36.000 0.00 0.00 0.00 3.02
206 207 7.554118 TCCTATTCTGAGCTTTTTAGTGATTGG 59.446 37.037 0.00 0.00 0.00 3.16
217 218 5.022787 AGAGTGACTCCTATTCTGAGCTTT 58.977 41.667 9.33 0.00 32.98 3.51
220 221 3.699038 ACAGAGTGACTCCTATTCTGAGC 59.301 47.826 9.33 0.00 38.81 4.26
221 222 4.439974 GCACAGAGTGACTCCTATTCTGAG 60.440 50.000 9.33 0.00 38.81 3.35
222 223 3.445450 GCACAGAGTGACTCCTATTCTGA 59.555 47.826 9.33 0.00 38.81 3.27
230 231 2.246719 AAAGTGCACAGAGTGACTCC 57.753 50.000 21.04 0.00 35.23 3.85
231 232 4.446051 GTCTTAAAGTGCACAGAGTGACTC 59.554 45.833 21.04 3.98 35.23 3.36
236 237 3.388024 TCCAGTCTTAAAGTGCACAGAGT 59.612 43.478 21.04 12.72 0.00 3.24
237 238 3.995199 TCCAGTCTTAAAGTGCACAGAG 58.005 45.455 21.04 10.68 0.00 3.35
243 244 3.625764 TGTGTGTTCCAGTCTTAAAGTGC 59.374 43.478 0.00 0.00 0.00 4.40
257 258 5.971763 AGGATATCAGTTCTCTGTGTGTTC 58.028 41.667 4.83 0.00 41.91 3.18
262 263 5.362143 TCCTCAAGGATATCAGTTCTCTGTG 59.638 44.000 4.83 0.00 39.78 3.66
268 275 4.759183 GGCATTCCTCAAGGATATCAGTTC 59.241 45.833 4.83 0.00 44.98 3.01
387 394 6.065374 TGAGCCTTTTGTTGGTCTACAAATA 58.935 36.000 10.43 3.57 44.76 1.40
392 399 6.569179 TTTATGAGCCTTTTGTTGGTCTAC 57.431 37.500 0.00 0.00 0.00 2.59
477 492 7.255277 GGATTTGTTTCATCTATGGGCTAGAAC 60.255 40.741 0.00 0.00 39.88 3.01
530 545 6.431198 TGCCTTTTGTCGGTCTATAAATTC 57.569 37.500 0.00 0.00 0.00 2.17
537 552 3.695830 AGAATGCCTTTTGTCGGTCTA 57.304 42.857 0.00 0.00 0.00 2.59
573 588 8.877864 TTTGTTAGTATCCTCAACATGGATTT 57.122 30.769 0.00 0.00 41.13 2.17
630 646 3.823304 GACTTTCTTCTTGGATGCCACTT 59.177 43.478 0.00 0.00 30.78 3.16
710 736 9.206870 AGTAATTTGAACATGGTTGCTTATTTG 57.793 29.630 0.00 0.00 0.00 2.32
737 763 3.199880 ACTGGGAGAACAAGTGTTGAG 57.800 47.619 0.42 0.00 38.56 3.02
1103 1143 0.246635 CGTCTTCCTGTAGGGTGTGG 59.753 60.000 0.00 0.00 36.25 4.17
1114 1154 4.070552 GCCGTGAGCCGTCTTCCT 62.071 66.667 0.00 0.00 34.35 3.36
1260 1300 2.028130 GTGTTGTCATTGTGGAACCCA 58.972 47.619 0.00 0.00 34.36 4.51
1286 1326 2.305095 CTCAAGGAGAGCACCCCAT 58.695 57.895 0.00 0.00 37.59 4.00
1344 1384 2.224159 GGAGAACCTCCCACTGGCA 61.224 63.158 1.60 0.00 44.36 4.92
1375 1415 2.981560 GATTGTGCACGGTGGGCAG 61.982 63.158 13.13 0.00 42.85 4.85
1400 1440 2.202810 CGCCGAGAAAGAGGGAGC 60.203 66.667 0.00 0.00 0.00 4.70
1401 1441 2.202810 GCGCCGAGAAAGAGGGAG 60.203 66.667 0.00 0.00 0.00 4.30
1402 1442 3.771160 GGCGCCGAGAAAGAGGGA 61.771 66.667 12.58 0.00 0.00 4.20
1403 1443 3.605749 TTGGCGCCGAGAAAGAGGG 62.606 63.158 23.90 0.00 0.00 4.30
1404 1444 2.047274 TTGGCGCCGAGAAAGAGG 60.047 61.111 23.90 0.00 0.00 3.69
1405 1445 2.730672 CGTTGGCGCCGAGAAAGAG 61.731 63.158 23.90 3.67 0.00 2.85
1406 1446 2.736995 CGTTGGCGCCGAGAAAGA 60.737 61.111 23.90 0.00 0.00 2.52
1407 1447 3.011760 GACGTTGGCGCCGAGAAAG 62.012 63.158 23.90 15.33 42.83 2.62
1408 1448 3.039588 GACGTTGGCGCCGAGAAA 61.040 61.111 23.90 7.51 42.83 2.52
1417 1457 4.660938 AGGGCTTGGGACGTTGGC 62.661 66.667 0.00 0.00 0.00 4.52
1418 1458 2.359975 GAGGGCTTGGGACGTTGG 60.360 66.667 0.00 0.00 0.00 3.77
1419 1459 2.359975 GGAGGGCTTGGGACGTTG 60.360 66.667 0.00 0.00 0.00 4.10
1420 1460 4.016706 CGGAGGGCTTGGGACGTT 62.017 66.667 0.00 0.00 0.00 3.99
1440 1480 2.983030 TTGGTCGTGTGGGCATGC 60.983 61.111 9.90 9.90 0.00 4.06
1441 1481 2.625823 GGTTGGTCGTGTGGGCATG 61.626 63.158 0.00 0.00 0.00 4.06
1442 1482 2.282180 GGTTGGTCGTGTGGGCAT 60.282 61.111 0.00 0.00 0.00 4.40
1443 1483 3.469863 GAGGTTGGTCGTGTGGGCA 62.470 63.158 0.00 0.00 0.00 5.36
1444 1484 2.668550 GAGGTTGGTCGTGTGGGC 60.669 66.667 0.00 0.00 0.00 5.36
1445 1485 2.357034 CGAGGTTGGTCGTGTGGG 60.357 66.667 0.00 0.00 35.14 4.61
1451 1491 0.169672 ACGTATGACGAGGTTGGTCG 59.830 55.000 5.94 0.00 46.05 4.79
1452 1492 1.468736 GGACGTATGACGAGGTTGGTC 60.469 57.143 5.94 0.00 46.05 4.02
1453 1493 0.529378 GGACGTATGACGAGGTTGGT 59.471 55.000 5.94 0.00 46.05 3.67
1454 1494 0.179119 GGGACGTATGACGAGGTTGG 60.179 60.000 5.94 0.00 46.05 3.77
1455 1495 3.340727 GGGACGTATGACGAGGTTG 57.659 57.895 5.94 0.00 46.05 3.77
1474 1514 4.509737 GTGGTAGCCCGAGACGCC 62.510 72.222 0.00 0.00 0.00 5.68
1475 1515 4.509737 GGTGGTAGCCCGAGACGC 62.510 72.222 0.00 0.00 0.00 5.19
1476 1516 2.754658 AGGTGGTAGCCCGAGACG 60.755 66.667 0.00 0.00 0.00 4.18
1477 1517 1.255667 TTGAGGTGGTAGCCCGAGAC 61.256 60.000 0.00 0.00 0.00 3.36
1478 1518 1.077805 TTGAGGTGGTAGCCCGAGA 59.922 57.895 0.00 0.00 0.00 4.04
1479 1519 1.218316 GTTGAGGTGGTAGCCCGAG 59.782 63.158 0.00 0.00 0.00 4.63
1480 1520 2.288025 GGTTGAGGTGGTAGCCCGA 61.288 63.158 0.00 0.00 0.00 5.14
1481 1521 2.240162 GAGGTTGAGGTGGTAGCCCG 62.240 65.000 0.00 0.00 0.00 6.13
1482 1522 1.602771 GAGGTTGAGGTGGTAGCCC 59.397 63.158 0.00 0.00 0.00 5.19
1483 1523 1.218316 CGAGGTTGAGGTGGTAGCC 59.782 63.158 0.00 0.00 0.00 3.93
1484 1524 0.108756 GACGAGGTTGAGGTGGTAGC 60.109 60.000 0.00 0.00 0.00 3.58
1485 1525 0.170561 CGACGAGGTTGAGGTGGTAG 59.829 60.000 0.00 0.00 0.00 3.18
1486 1526 1.246056 CCGACGAGGTTGAGGTGGTA 61.246 60.000 0.00 0.00 34.51 3.25
1487 1527 2.571216 CCGACGAGGTTGAGGTGGT 61.571 63.158 0.00 0.00 34.51 4.16
1488 1528 2.261671 CCGACGAGGTTGAGGTGG 59.738 66.667 0.00 0.00 34.51 4.61
1489 1529 2.432628 GCCGACGAGGTTGAGGTG 60.433 66.667 0.00 0.00 43.70 4.00
1490 1530 2.227089 GATGCCGACGAGGTTGAGGT 62.227 60.000 0.00 0.00 43.70 3.85
1491 1531 1.519455 GATGCCGACGAGGTTGAGG 60.519 63.158 0.00 0.00 43.70 3.86
1492 1532 1.078759 GTGATGCCGACGAGGTTGAG 61.079 60.000 0.00 0.00 43.70 3.02
1493 1533 1.080093 GTGATGCCGACGAGGTTGA 60.080 57.895 0.00 0.00 43.70 3.18
1494 1534 2.100631 GGTGATGCCGACGAGGTTG 61.101 63.158 0.00 0.00 43.70 3.77
1495 1535 2.264794 GGTGATGCCGACGAGGTT 59.735 61.111 0.00 0.00 43.70 3.50
1496 1536 2.849096 TAGGGTGATGCCGACGAGGT 62.849 60.000 0.00 0.00 43.70 3.85
1497 1537 2.076622 CTAGGGTGATGCCGACGAGG 62.077 65.000 0.00 0.00 44.97 4.63
1498 1538 1.360551 CTAGGGTGATGCCGACGAG 59.639 63.158 0.00 0.00 38.44 4.18
1499 1539 2.125326 CCTAGGGTGATGCCGACGA 61.125 63.158 0.00 0.00 38.44 4.20
1500 1540 2.417516 CCTAGGGTGATGCCGACG 59.582 66.667 0.00 0.00 38.44 5.12
1501 1541 2.822399 CCCTAGGGTGATGCCGAC 59.178 66.667 20.88 0.00 38.44 4.79
1511 1551 0.745468 GAGACGCTTGTACCCTAGGG 59.255 60.000 27.36 27.36 42.03 3.53
1512 1552 1.471119 TGAGACGCTTGTACCCTAGG 58.529 55.000 0.06 0.06 0.00 3.02
1513 1553 2.753452 TCTTGAGACGCTTGTACCCTAG 59.247 50.000 0.00 0.00 0.00 3.02
1514 1554 2.799017 TCTTGAGACGCTTGTACCCTA 58.201 47.619 0.00 0.00 0.00 3.53
1515 1555 1.629043 TCTTGAGACGCTTGTACCCT 58.371 50.000 0.00 0.00 0.00 4.34
1516 1556 2.541556 GATCTTGAGACGCTTGTACCC 58.458 52.381 0.00 0.00 0.00 3.69
1517 1557 2.159421 TCGATCTTGAGACGCTTGTACC 60.159 50.000 0.00 0.00 0.00 3.34
1518 1558 2.847133 GTCGATCTTGAGACGCTTGTAC 59.153 50.000 0.00 0.00 0.00 2.90
1519 1559 2.486592 TGTCGATCTTGAGACGCTTGTA 59.513 45.455 0.00 0.00 40.05 2.41
1520 1560 1.269723 TGTCGATCTTGAGACGCTTGT 59.730 47.619 0.00 0.00 40.05 3.16
1521 1561 1.982612 TGTCGATCTTGAGACGCTTG 58.017 50.000 0.00 0.00 40.05 4.01
1522 1562 2.600731 CTTGTCGATCTTGAGACGCTT 58.399 47.619 0.00 0.00 40.05 4.68
1523 1563 1.734047 GCTTGTCGATCTTGAGACGCT 60.734 52.381 0.00 0.00 40.05 5.07
1524 1564 0.642800 GCTTGTCGATCTTGAGACGC 59.357 55.000 0.00 0.00 40.05 5.19
1525 1565 0.910513 CGCTTGTCGATCTTGAGACG 59.089 55.000 0.00 0.00 41.67 4.18
1526 1566 0.642800 GCGCTTGTCGATCTTGAGAC 59.357 55.000 0.00 0.00 41.67 3.36
1527 1567 0.798389 CGCGCTTGTCGATCTTGAGA 60.798 55.000 5.56 0.00 41.67 3.27
1528 1568 1.073216 ACGCGCTTGTCGATCTTGAG 61.073 55.000 5.73 0.00 41.67 3.02
1529 1569 1.071019 GACGCGCTTGTCGATCTTGA 61.071 55.000 5.73 0.00 41.67 3.02
1530 1570 1.073216 AGACGCGCTTGTCGATCTTG 61.073 55.000 5.73 0.00 43.70 3.02
1531 1571 0.388649 AAGACGCGCTTGTCGATCTT 60.389 50.000 5.73 1.66 43.70 2.40
1532 1572 0.798771 GAAGACGCGCTTGTCGATCT 60.799 55.000 18.16 3.31 43.70 2.75
1533 1573 1.626388 GAAGACGCGCTTGTCGATC 59.374 57.895 18.16 7.13 43.70 3.69
1534 1574 2.152699 CGAAGACGCGCTTGTCGAT 61.153 57.895 18.16 1.08 43.70 3.59
1535 1575 2.799502 CGAAGACGCGCTTGTCGA 60.800 61.111 18.16 0.00 43.70 4.20
1536 1576 2.799502 TCGAAGACGCGCTTGTCG 60.800 61.111 18.16 15.89 43.70 4.35
1547 1587 1.300620 CAACTGTGGCCGTCGAAGA 60.301 57.895 0.00 0.00 0.00 2.87
1548 1588 2.954753 GCAACTGTGGCCGTCGAAG 61.955 63.158 0.00 0.00 0.00 3.79
1549 1589 2.970324 GCAACTGTGGCCGTCGAA 60.970 61.111 0.00 0.00 0.00 3.71
1550 1590 4.228567 TGCAACTGTGGCCGTCGA 62.229 61.111 4.41 0.00 0.00 4.20
1551 1591 3.716006 CTGCAACTGTGGCCGTCG 61.716 66.667 4.41 0.00 0.00 5.12
1552 1592 4.030452 GCTGCAACTGTGGCCGTC 62.030 66.667 4.41 0.00 0.00 4.79
1553 1593 4.873810 TGCTGCAACTGTGGCCGT 62.874 61.111 4.41 0.00 0.00 5.68
1554 1594 3.332493 GATGCTGCAACTGTGGCCG 62.332 63.158 6.36 0.00 0.00 6.13
1555 1595 1.808531 TTGATGCTGCAACTGTGGCC 61.809 55.000 6.36 0.00 0.00 5.36
1556 1596 0.665369 GTTGATGCTGCAACTGTGGC 60.665 55.000 6.36 0.00 43.60 5.01
1557 1597 0.038892 GGTTGATGCTGCAACTGTGG 60.039 55.000 6.36 0.00 45.64 4.17
1558 1598 0.038892 GGGTTGATGCTGCAACTGTG 60.039 55.000 6.36 0.00 45.64 3.66
1559 1599 0.467844 TGGGTTGATGCTGCAACTGT 60.468 50.000 6.36 0.00 45.64 3.55
1560 1600 0.242825 CTGGGTTGATGCTGCAACTG 59.757 55.000 6.36 8.26 45.64 3.16
1561 1601 1.530013 GCTGGGTTGATGCTGCAACT 61.530 55.000 6.36 0.00 45.64 3.16
1562 1602 1.080298 GCTGGGTTGATGCTGCAAC 60.080 57.895 6.36 4.29 45.62 4.17
1563 1603 2.628696 CGCTGGGTTGATGCTGCAA 61.629 57.895 6.36 0.00 0.00 4.08
1564 1604 3.057548 CGCTGGGTTGATGCTGCA 61.058 61.111 4.13 4.13 0.00 4.41
1565 1605 3.818787 CCGCTGGGTTGATGCTGC 61.819 66.667 0.00 0.00 0.00 5.25
1566 1606 2.046023 TCCGCTGGGTTGATGCTG 60.046 61.111 0.00 0.00 33.83 4.41
1567 1607 2.270205 CTCCGCTGGGTTGATGCT 59.730 61.111 0.00 0.00 33.83 3.79
1568 1608 2.109126 GTCTCCGCTGGGTTGATGC 61.109 63.158 0.00 0.00 33.83 3.91
1569 1609 1.450312 GGTCTCCGCTGGGTTGATG 60.450 63.158 0.00 0.00 33.83 3.07
1570 1610 1.274703 ATGGTCTCCGCTGGGTTGAT 61.275 55.000 0.00 0.00 33.83 2.57
1571 1611 1.899437 GATGGTCTCCGCTGGGTTGA 61.899 60.000 0.00 0.00 33.83 3.18
1572 1612 1.450312 GATGGTCTCCGCTGGGTTG 60.450 63.158 0.00 0.00 33.83 3.77
1573 1613 1.918293 TGATGGTCTCCGCTGGGTT 60.918 57.895 0.00 0.00 33.83 4.11
1574 1614 2.284625 TGATGGTCTCCGCTGGGT 60.285 61.111 0.00 0.00 33.83 4.51
1575 1615 2.187946 GTGATGGTCTCCGCTGGG 59.812 66.667 0.00 0.00 0.00 4.45
1576 1616 1.448540 GTGTGATGGTCTCCGCTGG 60.449 63.158 0.00 0.00 0.00 4.85
1577 1617 0.107993 ATGTGTGATGGTCTCCGCTG 60.108 55.000 0.00 0.00 0.00 5.18
1578 1618 0.615331 AATGTGTGATGGTCTCCGCT 59.385 50.000 0.00 0.00 0.00 5.52
1579 1619 1.398390 GAAATGTGTGATGGTCTCCGC 59.602 52.381 0.00 0.00 0.00 5.54
1580 1620 1.660607 CGAAATGTGTGATGGTCTCCG 59.339 52.381 0.00 0.00 0.00 4.63
1581 1621 1.398390 GCGAAATGTGTGATGGTCTCC 59.602 52.381 0.00 0.00 0.00 3.71
1582 1622 1.061131 CGCGAAATGTGTGATGGTCTC 59.939 52.381 0.00 0.00 0.00 3.36
1583 1623 1.078709 CGCGAAATGTGTGATGGTCT 58.921 50.000 0.00 0.00 0.00 3.85
1584 1624 0.096976 CCGCGAAATGTGTGATGGTC 59.903 55.000 8.23 0.00 0.00 4.02
1585 1625 0.321210 TCCGCGAAATGTGTGATGGT 60.321 50.000 8.23 0.00 0.00 3.55
1586 1626 0.374758 CTCCGCGAAATGTGTGATGG 59.625 55.000 8.23 0.00 0.00 3.51
1587 1627 0.247814 GCTCCGCGAAATGTGTGATG 60.248 55.000 8.23 0.00 0.00 3.07
1588 1628 1.369091 GGCTCCGCGAAATGTGTGAT 61.369 55.000 8.23 0.00 0.00 3.06
1589 1629 2.032634 GGCTCCGCGAAATGTGTGA 61.033 57.895 8.23 0.00 0.00 3.58
1590 1630 2.480555 GGCTCCGCGAAATGTGTG 59.519 61.111 8.23 0.00 0.00 3.82
1591 1631 2.852495 ATCGGCTCCGCGAAATGTGT 62.852 55.000 8.23 0.00 39.59 3.72
1592 1632 0.874175 TATCGGCTCCGCGAAATGTG 60.874 55.000 8.23 0.00 39.59 3.21
1593 1633 0.033504 ATATCGGCTCCGCGAAATGT 59.966 50.000 8.23 0.00 39.59 2.71
1594 1634 1.654105 GTATATCGGCTCCGCGAAATG 59.346 52.381 8.23 0.00 39.59 2.32
1595 1635 1.403780 GGTATATCGGCTCCGCGAAAT 60.404 52.381 8.23 0.00 39.59 2.17
1596 1636 0.038892 GGTATATCGGCTCCGCGAAA 60.039 55.000 8.23 0.00 39.59 3.46
1597 1637 0.892358 AGGTATATCGGCTCCGCGAA 60.892 55.000 8.23 0.00 39.59 4.70
1598 1638 0.892358 AAGGTATATCGGCTCCGCGA 60.892 55.000 8.23 0.00 39.59 5.87
1599 1639 0.732880 CAAGGTATATCGGCTCCGCG 60.733 60.000 0.00 0.00 39.59 6.46
1600 1640 0.317479 ACAAGGTATATCGGCTCCGC 59.683 55.000 2.96 0.00 39.59 5.54
1601 1641 1.401148 CGACAAGGTATATCGGCTCCG 60.401 57.143 1.14 1.14 41.35 4.63
1602 1642 1.612463 ACGACAAGGTATATCGGCTCC 59.388 52.381 0.00 0.00 40.16 4.70
1603 1643 2.607282 CCACGACAAGGTATATCGGCTC 60.607 54.545 0.00 0.00 40.16 4.70
1604 1644 1.340248 CCACGACAAGGTATATCGGCT 59.660 52.381 0.00 0.00 40.16 5.52
1605 1645 1.338973 TCCACGACAAGGTATATCGGC 59.661 52.381 0.00 0.00 40.16 5.54
1606 1646 3.720949 TTCCACGACAAGGTATATCGG 57.279 47.619 0.00 0.00 40.16 4.18
1607 1647 5.501897 GCTTTTTCCACGACAAGGTATATCG 60.502 44.000 0.00 0.00 41.60 2.92
1608 1648 5.353123 TGCTTTTTCCACGACAAGGTATATC 59.647 40.000 0.00 0.00 0.00 1.63
1609 1649 5.250200 TGCTTTTTCCACGACAAGGTATAT 58.750 37.500 0.00 0.00 0.00 0.86
1610 1650 4.643463 TGCTTTTTCCACGACAAGGTATA 58.357 39.130 0.00 0.00 0.00 1.47
1611 1651 3.482436 TGCTTTTTCCACGACAAGGTAT 58.518 40.909 0.00 0.00 0.00 2.73
1612 1652 2.920524 TGCTTTTTCCACGACAAGGTA 58.079 42.857 0.00 0.00 0.00 3.08
1613 1653 1.757682 TGCTTTTTCCACGACAAGGT 58.242 45.000 0.00 0.00 0.00 3.50
1614 1654 3.052036 CAATGCTTTTTCCACGACAAGG 58.948 45.455 0.00 0.00 0.00 3.61
1615 1655 3.052036 CCAATGCTTTTTCCACGACAAG 58.948 45.455 0.00 0.00 0.00 3.16
1616 1656 2.428890 ACCAATGCTTTTTCCACGACAA 59.571 40.909 0.00 0.00 0.00 3.18
1617 1657 2.028130 ACCAATGCTTTTTCCACGACA 58.972 42.857 0.00 0.00 0.00 4.35
1618 1658 2.393764 CACCAATGCTTTTTCCACGAC 58.606 47.619 0.00 0.00 0.00 4.34
1619 1659 1.339610 CCACCAATGCTTTTTCCACGA 59.660 47.619 0.00 0.00 0.00 4.35
1620 1660 1.782044 CCACCAATGCTTTTTCCACG 58.218 50.000 0.00 0.00 0.00 4.94
1621 1661 1.511850 GCCACCAATGCTTTTTCCAC 58.488 50.000 0.00 0.00 0.00 4.02
1622 1662 0.033228 CGCCACCAATGCTTTTTCCA 59.967 50.000 0.00 0.00 0.00 3.53
1623 1663 1.291184 GCGCCACCAATGCTTTTTCC 61.291 55.000 0.00 0.00 0.00 3.13
1624 1664 1.616872 CGCGCCACCAATGCTTTTTC 61.617 55.000 0.00 0.00 0.00 2.29
1625 1665 1.664333 CGCGCCACCAATGCTTTTT 60.664 52.632 0.00 0.00 0.00 1.94
1626 1666 2.049248 CGCGCCACCAATGCTTTT 60.049 55.556 0.00 0.00 0.00 2.27
1627 1667 4.722855 GCGCGCCACCAATGCTTT 62.723 61.111 23.24 0.00 0.00 3.51
1631 1671 3.339539 TTCATGCGCGCCACCAATG 62.340 57.895 30.77 24.02 0.00 2.82
1632 1672 3.055080 CTTCATGCGCGCCACCAAT 62.055 57.895 30.77 12.41 0.00 3.16
1633 1673 3.736100 CTTCATGCGCGCCACCAA 61.736 61.111 30.77 14.73 0.00 3.67
1636 1676 3.869272 CTCCTTCATGCGCGCCAC 61.869 66.667 30.77 0.92 0.00 5.01
1639 1679 2.586079 TAGCTCCTTCATGCGCGC 60.586 61.111 27.26 27.26 0.00 6.86
1640 1680 1.953138 CCTAGCTCCTTCATGCGCG 60.953 63.158 0.00 0.00 0.00 6.86
1641 1681 1.596477 CCCTAGCTCCTTCATGCGC 60.596 63.158 0.00 0.00 0.00 6.09
1642 1682 0.249657 GACCCTAGCTCCTTCATGCG 60.250 60.000 0.00 0.00 0.00 4.73
1643 1683 0.249657 CGACCCTAGCTCCTTCATGC 60.250 60.000 0.00 0.00 0.00 4.06
1644 1684 0.390860 CCGACCCTAGCTCCTTCATG 59.609 60.000 0.00 0.00 0.00 3.07
1645 1685 0.261991 TCCGACCCTAGCTCCTTCAT 59.738 55.000 0.00 0.00 0.00 2.57
1646 1686 0.683504 GTCCGACCCTAGCTCCTTCA 60.684 60.000 0.00 0.00 0.00 3.02
1647 1687 1.393487 GGTCCGACCCTAGCTCCTTC 61.393 65.000 6.25 0.00 30.04 3.46
1648 1688 1.381463 GGTCCGACCCTAGCTCCTT 60.381 63.158 6.25 0.00 30.04 3.36
1649 1689 2.279408 GGTCCGACCCTAGCTCCT 59.721 66.667 6.25 0.00 30.04 3.69
1658 1698 4.078516 CCTTCACCGGGTCCGACC 62.079 72.222 9.30 9.30 42.83 4.79
1659 1699 4.078516 CCCTTCACCGGGTCCGAC 62.079 72.222 11.39 0.00 42.83 4.79
1695 1735 2.932855 TGTACATCCGGTCAAACCAA 57.067 45.000 0.00 0.00 38.47 3.67
1815 1855 2.480555 GCGACCATGAACCTTGCG 59.519 61.111 0.00 0.00 0.00 4.85
1819 1859 4.778143 GCCGGCGACCATGAACCT 62.778 66.667 12.58 0.00 0.00 3.50
1869 1909 1.447838 CCGCGTATTCACCTGCTGT 60.448 57.895 4.92 0.00 0.00 4.40
1953 1993 0.695347 AGAACAAAGCTAGGCTGCCT 59.305 50.000 26.52 26.52 39.62 4.75
1986 2031 6.586868 TGAATGCAAATTGGCGATTATTTC 57.413 33.333 0.00 3.23 36.28 2.17
1994 2039 9.524106 AATATGATATATGAATGCAAATTGGCG 57.476 29.630 0.00 0.00 36.28 5.69
2051 2096 6.030548 TGGAAATGACACTGTGTTCAAAAA 57.969 33.333 15.54 0.00 0.00 1.94
2052 2097 5.651387 TGGAAATGACACTGTGTTCAAAA 57.349 34.783 15.54 0.00 0.00 2.44
2053 2098 5.184864 AGTTGGAAATGACACTGTGTTCAAA 59.815 36.000 15.54 5.53 0.00 2.69
2054 2099 4.704540 AGTTGGAAATGACACTGTGTTCAA 59.295 37.500 15.54 9.88 0.00 2.69
2055 2100 4.269183 AGTTGGAAATGACACTGTGTTCA 58.731 39.130 15.54 13.97 0.00 3.18
2056 2101 4.900635 AGTTGGAAATGACACTGTGTTC 57.099 40.909 15.54 8.27 0.00 3.18
2057 2102 4.704540 TCAAGTTGGAAATGACACTGTGTT 59.295 37.500 15.54 0.00 0.00 3.32
2058 2103 4.269183 TCAAGTTGGAAATGACACTGTGT 58.731 39.130 14.23 14.23 0.00 3.72
2059 2104 4.898829 TCAAGTTGGAAATGACACTGTG 57.101 40.909 6.19 6.19 0.00 3.66
2060 2105 4.202050 GCTTCAAGTTGGAAATGACACTGT 60.202 41.667 2.34 0.00 0.00 3.55
2067 2112 3.354089 ACGTGCTTCAAGTTGGAAATG 57.646 42.857 2.34 0.00 0.00 2.32
2161 2628 8.796458 CGCTAGTGCCAATTTGACGATCAAAT 62.796 42.308 15.64 15.64 45.67 2.32
2162 2629 7.588305 CGCTAGTGCCAATTTGACGATCAAA 62.588 44.000 13.12 13.12 42.19 2.69
2163 2630 3.126858 GCTAGTGCCAATTTGACGATCAA 59.873 43.478 0.00 0.00 34.03 2.57
2164 2631 2.677836 GCTAGTGCCAATTTGACGATCA 59.322 45.455 0.00 0.00 0.00 2.92
2165 2632 2.285834 CGCTAGTGCCAATTTGACGATC 60.286 50.000 0.00 0.00 35.36 3.69
2166 2633 1.665679 CGCTAGTGCCAATTTGACGAT 59.334 47.619 0.00 0.00 35.36 3.73
2167 2634 1.075542 CGCTAGTGCCAATTTGACGA 58.924 50.000 0.00 0.00 35.36 4.20
2168 2635 0.096976 CCGCTAGTGCCAATTTGACG 59.903 55.000 0.00 0.00 35.36 4.35
2169 2636 1.448985 TCCGCTAGTGCCAATTTGAC 58.551 50.000 0.00 0.00 35.36 3.18
2170 2637 2.192664 TTCCGCTAGTGCCAATTTGA 57.807 45.000 0.00 0.00 35.36 2.69
2171 2638 2.164219 ACATTCCGCTAGTGCCAATTTG 59.836 45.455 0.00 0.00 35.36 2.32
2172 2639 2.423538 GACATTCCGCTAGTGCCAATTT 59.576 45.455 0.00 0.00 35.36 1.82
2173 2640 2.017049 GACATTCCGCTAGTGCCAATT 58.983 47.619 0.00 0.00 35.36 2.32
2174 2641 1.210478 AGACATTCCGCTAGTGCCAAT 59.790 47.619 0.00 0.00 35.36 3.16
2175 2642 0.613260 AGACATTCCGCTAGTGCCAA 59.387 50.000 0.00 0.00 35.36 4.52
2176 2643 0.175760 GAGACATTCCGCTAGTGCCA 59.824 55.000 0.00 0.00 35.36 4.92
2177 2644 0.530870 GGAGACATTCCGCTAGTGCC 60.531 60.000 0.00 0.00 35.91 5.01
2178 2645 2.979130 GGAGACATTCCGCTAGTGC 58.021 57.895 0.00 0.00 35.91 4.40
2338 2836 3.649023 TCCACTAGGCCAACTCTTACAAA 59.351 43.478 5.01 0.00 33.74 2.83
2340 2838 2.832129 CTCCACTAGGCCAACTCTTACA 59.168 50.000 5.01 0.00 33.74 2.41
2341 2839 2.832733 ACTCCACTAGGCCAACTCTTAC 59.167 50.000 5.01 0.00 33.74 2.34
2342 2840 3.185880 ACTCCACTAGGCCAACTCTTA 57.814 47.619 5.01 0.00 33.74 2.10
2343 2841 2.031495 ACTCCACTAGGCCAACTCTT 57.969 50.000 5.01 0.00 33.74 2.85
2346 2844 1.196012 GCTACTCCACTAGGCCAACT 58.804 55.000 5.01 0.00 33.74 3.16
2358 2856 0.250727 TTGCACAACCCAGCTACTCC 60.251 55.000 0.00 0.00 0.00 3.85
2363 2861 1.708341 AAGATTTGCACAACCCAGCT 58.292 45.000 0.00 0.00 0.00 4.24
2416 2914 0.847373 TGCAACCACCACTTTCCCTA 59.153 50.000 0.00 0.00 0.00 3.53
2431 2951 1.408340 CTGTTCATTGTGTGGGTGCAA 59.592 47.619 0.00 0.00 0.00 4.08
2481 3001 6.672147 CATCCACGAAGTTTCAGAATCTTTT 58.328 36.000 7.73 0.00 41.61 2.27
2482 3002 5.335191 GCATCCACGAAGTTTCAGAATCTTT 60.335 40.000 7.73 0.00 41.61 2.52
2483 3003 4.154918 GCATCCACGAAGTTTCAGAATCTT 59.845 41.667 6.22 6.22 41.61 2.40
2485 3005 3.484229 CGCATCCACGAAGTTTCAGAATC 60.484 47.826 0.00 0.00 41.61 2.52
2487 3007 1.798223 CGCATCCACGAAGTTTCAGAA 59.202 47.619 0.00 0.00 41.61 3.02
2488 3008 1.000394 TCGCATCCACGAAGTTTCAGA 60.000 47.619 0.00 0.00 41.61 3.27
2489 3009 1.428448 TCGCATCCACGAAGTTTCAG 58.572 50.000 0.00 0.00 41.61 3.02
2490 3010 1.999735 GATCGCATCCACGAAGTTTCA 59.000 47.619 0.00 0.00 46.59 2.69
2492 3012 2.093306 TGATCGCATCCACGAAGTTT 57.907 45.000 0.00 0.00 46.59 2.66
2493 3013 1.935873 CATGATCGCATCCACGAAGTT 59.064 47.619 0.00 0.00 46.59 2.66
2494 3014 1.136891 TCATGATCGCATCCACGAAGT 59.863 47.619 0.00 0.00 46.59 3.01
2495 3015 1.524355 GTCATGATCGCATCCACGAAG 59.476 52.381 0.00 0.00 46.59 3.79
2498 3018 0.530431 TGGTCATGATCGCATCCACG 60.530 55.000 0.00 0.00 30.68 4.94
2499 3019 1.667236 TTGGTCATGATCGCATCCAC 58.333 50.000 0.00 0.00 30.55 4.02
2500 3020 2.416680 TTTGGTCATGATCGCATCCA 57.583 45.000 0.00 0.00 30.68 3.41
2501 3021 2.620115 ACATTTGGTCATGATCGCATCC 59.380 45.455 0.00 0.00 30.68 3.51
2503 3023 4.724074 AAACATTTGGTCATGATCGCAT 57.276 36.364 0.00 0.00 34.29 4.73
2504 3024 5.392919 CCTTAAACATTTGGTCATGATCGCA 60.393 40.000 0.00 0.00 0.00 5.10
2505 3025 5.036737 CCTTAAACATTTGGTCATGATCGC 58.963 41.667 0.00 0.00 0.00 4.58
2506 3026 6.435430 TCCTTAAACATTTGGTCATGATCG 57.565 37.500 0.00 0.00 0.00 3.69
2507 3027 6.096001 AGCTCCTTAAACATTTGGTCATGATC 59.904 38.462 0.00 0.00 0.00 2.92
2508 3028 5.954150 AGCTCCTTAAACATTTGGTCATGAT 59.046 36.000 0.00 0.00 0.00 2.45
2509 3029 5.324409 AGCTCCTTAAACATTTGGTCATGA 58.676 37.500 0.00 0.00 0.00 3.07
2510 3030 5.649782 AGCTCCTTAAACATTTGGTCATG 57.350 39.130 0.00 0.00 0.00 3.07
2511 3031 5.567423 GCAAGCTCCTTAAACATTTGGTCAT 60.567 40.000 0.00 0.00 0.00 3.06
2512 3032 4.261994 GCAAGCTCCTTAAACATTTGGTCA 60.262 41.667 0.00 0.00 0.00 4.02
2513 3033 4.237724 GCAAGCTCCTTAAACATTTGGTC 58.762 43.478 0.00 0.00 0.00 4.02
2514 3034 3.640967 TGCAAGCTCCTTAAACATTTGGT 59.359 39.130 0.00 0.00 0.00 3.67
2515 3035 4.255833 TGCAAGCTCCTTAAACATTTGG 57.744 40.909 0.00 0.00 0.00 3.28
2525 3045 2.101415 GACCAAACTTTGCAAGCTCCTT 59.899 45.455 0.00 0.00 0.00 3.36
2556 3076 7.336679 TCATTTGTATGGAGAACATTCGATGTT 59.663 33.333 11.40 11.40 42.71 2.71
2557 3077 6.823182 TCATTTGTATGGAGAACATTCGATGT 59.177 34.615 0.00 0.00 41.03 3.06
2560 3080 5.290885 CGTCATTTGTATGGAGAACATTCGA 59.709 40.000 0.00 0.00 41.03 3.71
2561 3081 5.492854 CGTCATTTGTATGGAGAACATTCG 58.507 41.667 0.00 0.00 41.03 3.34
2563 3083 4.943705 AGCGTCATTTGTATGGAGAACATT 59.056 37.500 0.00 0.00 41.03 2.71
2564 3084 4.517285 AGCGTCATTTGTATGGAGAACAT 58.483 39.130 0.00 0.00 43.68 2.71
2566 3086 4.033358 CAGAGCGTCATTTGTATGGAGAAC 59.967 45.833 0.00 0.00 32.40 3.01
2567 3087 4.183865 CAGAGCGTCATTTGTATGGAGAA 58.816 43.478 0.00 0.00 32.40 2.87
2568 3088 3.785486 CAGAGCGTCATTTGTATGGAGA 58.215 45.455 0.00 0.00 32.40 3.71
2569 3089 2.286294 GCAGAGCGTCATTTGTATGGAG 59.714 50.000 0.00 0.00 32.40 3.86
2570 3090 2.279741 GCAGAGCGTCATTTGTATGGA 58.720 47.619 0.00 0.00 32.40 3.41
2571 3091 2.009051 TGCAGAGCGTCATTTGTATGG 58.991 47.619 0.00 0.00 32.40 2.74
2572 3092 2.223112 GGTGCAGAGCGTCATTTGTATG 60.223 50.000 0.00 0.00 0.00 2.39
2573 3093 2.009774 GGTGCAGAGCGTCATTTGTAT 58.990 47.619 0.00 0.00 0.00 2.29
2574 3094 1.438651 GGTGCAGAGCGTCATTTGTA 58.561 50.000 0.00 0.00 0.00 2.41
2575 3095 1.237285 GGGTGCAGAGCGTCATTTGT 61.237 55.000 0.00 0.00 0.00 2.83
2576 3096 1.236616 TGGGTGCAGAGCGTCATTTG 61.237 55.000 0.00 0.00 0.00 2.32
2577 3097 0.537143 TTGGGTGCAGAGCGTCATTT 60.537 50.000 0.00 0.00 0.00 2.32
2578 3098 0.957395 CTTGGGTGCAGAGCGTCATT 60.957 55.000 0.00 0.00 0.00 2.57
2579 3099 1.376424 CTTGGGTGCAGAGCGTCAT 60.376 57.895 0.00 0.00 0.00 3.06
2580 3100 2.031012 CTTGGGTGCAGAGCGTCA 59.969 61.111 0.00 0.00 0.00 4.35
2581 3101 0.320421 TAACTTGGGTGCAGAGCGTC 60.320 55.000 0.00 0.00 0.00 5.19
2582 3102 0.324943 ATAACTTGGGTGCAGAGCGT 59.675 50.000 0.00 0.00 0.00 5.07
2583 3103 1.131126 CAATAACTTGGGTGCAGAGCG 59.869 52.381 0.00 0.00 0.00 5.03
2594 3114 7.222417 TGCTGAAAACATGTGAACAATAACTTG 59.778 33.333 0.00 0.00 38.39 3.16
2601 3121 7.264221 AGTTTATGCTGAAAACATGTGAACAA 58.736 30.769 0.00 0.00 38.92 2.83
2624 3144 7.602753 AGCTCTGTACAAAAAGAAAACAAAGT 58.397 30.769 0.00 0.00 0.00 2.66
2625 3145 7.220875 GGAGCTCTGTACAAAAAGAAAACAAAG 59.779 37.037 14.64 0.00 0.00 2.77
2627 3147 6.405397 GGGAGCTCTGTACAAAAAGAAAACAA 60.405 38.462 14.64 0.00 0.00 2.83
2628 3148 5.067283 GGGAGCTCTGTACAAAAAGAAAACA 59.933 40.000 14.64 0.00 0.00 2.83
2629 3149 5.507482 GGGGAGCTCTGTACAAAAAGAAAAC 60.507 44.000 14.64 0.00 0.00 2.43
2630 3150 4.583073 GGGGAGCTCTGTACAAAAAGAAAA 59.417 41.667 14.64 0.00 0.00 2.29
2631 3151 4.142038 GGGGAGCTCTGTACAAAAAGAAA 58.858 43.478 14.64 0.00 0.00 2.52
2632 3152 3.751518 GGGGAGCTCTGTACAAAAAGAA 58.248 45.455 14.64 0.00 0.00 2.52
2633 3153 2.289444 CGGGGAGCTCTGTACAAAAAGA 60.289 50.000 14.64 0.00 0.00 2.52
2634 3154 2.076863 CGGGGAGCTCTGTACAAAAAG 58.923 52.381 14.64 0.00 0.00 2.27
2640 3160 0.468400 AGATCCGGGGAGCTCTGTAC 60.468 60.000 14.64 1.76 35.87 2.90
2654 3174 2.024941 ACTTGGTGGGGAAATGAGATCC 60.025 50.000 0.00 0.00 36.16 3.36
2659 3179 2.103941 GCAAAACTTGGTGGGGAAATGA 59.896 45.455 0.00 0.00 0.00 2.57
2674 3194 5.733226 AATGTTTTAGGTGCTTGCAAAAC 57.267 34.783 0.00 11.46 39.93 2.43
2731 3251 9.853921 GATCAAAACTTAGCAAAACATTTTCAG 57.146 29.630 0.00 0.00 0.00 3.02
2771 3291 2.751436 CCCAGGGACATTGCACCG 60.751 66.667 0.00 0.00 0.00 4.94
2786 3306 2.093711 AGAGTTTGGTTTTTGTGCACCC 60.094 45.455 15.69 8.33 31.24 4.61
2815 3335 5.303078 ACAGAGAGATCAGCGGTGTATTTAT 59.697 40.000 15.22 0.00 0.00 1.40
2835 3355 2.401583 ACTTGTGTGCTGTGAACAGA 57.598 45.000 14.58 0.00 46.59 3.41
2846 3366 2.687935 AGCTGGGTTGTTTACTTGTGTG 59.312 45.455 0.00 0.00 0.00 3.82
2857 3377 2.086869 CATTGATCGAAGCTGGGTTGT 58.913 47.619 0.00 0.00 0.00 3.32
2860 3380 1.278985 TGTCATTGATCGAAGCTGGGT 59.721 47.619 0.00 0.00 0.00 4.51
2861 3381 1.938577 CTGTCATTGATCGAAGCTGGG 59.061 52.381 0.00 0.00 0.00 4.45
2870 3390 5.122869 TGCTGTTTTAGAGCTGTCATTGATC 59.877 40.000 0.00 0.00 37.35 2.92
2878 3398 3.330267 GCTACTGCTGTTTTAGAGCTGT 58.670 45.455 0.09 11.79 46.58 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.