Multiple sequence alignment - TraesCS4A01G266500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G266500 chr4A 100.000 2690 0 0 1 2690 578538799 578541488 0.000000e+00 4968.0
1 TraesCS4A01G266500 chr4D 94.161 805 33 7 1895 2688 23419136 23418335 0.000000e+00 1214.0
2 TraesCS4A01G266500 chr4D 94.064 657 20 9 1 640 23420760 23420106 0.000000e+00 979.0
3 TraesCS4A01G266500 chr4D 89.161 286 15 10 1432 1701 23419547 23419262 2.560000e-90 342.0
4 TraesCS4A01G266500 chr4B 93.695 793 32 11 1902 2688 35515140 35514360 0.000000e+00 1171.0
5 TraesCS4A01G266500 chr4B 94.127 647 24 6 1 634 35520865 35520220 0.000000e+00 972.0
6 TraesCS4A01G266500 chr4B 95.025 201 9 1 1502 1701 35515547 35515347 5.590000e-82 315.0
7 TraesCS4A01G266500 chr4B 95.238 189 6 1 1125 1310 35515794 35515606 2.020000e-76 296.0
8 TraesCS4A01G266500 chr1D 90.411 146 12 2 1307 1451 17613566 17613710 9.830000e-45 191.0
9 TraesCS4A01G266500 chr6B 92.481 133 9 1 1307 1439 101745914 101745783 3.540000e-44 189.0
10 TraesCS4A01G266500 chr6A 92.969 128 9 0 1307 1434 557948079 557947952 1.270000e-43 187.0
11 TraesCS4A01G266500 chr6A 97.403 77 2 0 722 798 1888666 1888742 6.040000e-27 132.0
12 TraesCS4A01G266500 chr6A 97.403 77 2 0 722 798 108945401 108945325 6.040000e-27 132.0
13 TraesCS4A01G266500 chr6A 77.953 127 19 7 722 841 511613973 511613849 1.340000e-08 71.3
14 TraesCS4A01G266500 chr5B 92.969 128 9 0 1307 1434 299604515 299604642 1.270000e-43 187.0
15 TraesCS4A01G266500 chr5B 92.366 131 8 2 1307 1436 660144711 660144582 4.570000e-43 185.0
16 TraesCS4A01G266500 chr5B 85.217 115 14 2 722 836 685636931 685637042 6.090000e-22 115.0
17 TraesCS4A01G266500 chr5B 97.727 44 0 1 800 842 57426954 57426997 1.030000e-09 75.0
18 TraesCS4A01G266500 chr5B 97.368 38 1 0 800 837 208257049 208257086 6.220000e-07 65.8
19 TraesCS4A01G266500 chr3A 92.308 130 10 0 1307 1436 16815487 16815358 4.570000e-43 185.0
20 TraesCS4A01G266500 chr3A 97.403 77 2 0 722 798 308676007 308675931 6.040000e-27 132.0
21 TraesCS4A01G266500 chr3A 97.403 77 2 0 722 798 574336676 574336600 6.040000e-27 132.0
22 TraesCS4A01G266500 chr3A 97.403 77 2 0 722 798 672302808 672302884 6.040000e-27 132.0
23 TraesCS4A01G266500 chr3A 97.674 43 0 1 801 842 742448338 742448380 3.710000e-09 73.1
24 TraesCS4A01G266500 chr1B 91.241 137 10 2 1300 1434 566686906 566687042 4.570000e-43 185.0
25 TraesCS4A01G266500 chr1A 92.913 127 9 0 1308 1434 115669393 115669267 4.570000e-43 185.0
26 TraesCS4A01G266500 chr1A 95.455 44 1 1 800 843 573325727 573325769 4.810000e-08 69.4
27 TraesCS4A01G266500 chr1A 97.500 40 1 0 801 840 578926217 578926178 4.810000e-08 69.4
28 TraesCS4A01G266500 chr7B 89.362 141 14 1 1308 1448 682710418 682710279 2.750000e-40 176.0
29 TraesCS4A01G266500 chr5A 97.403 77 2 0 722 798 368169400 368169324 6.040000e-27 132.0
30 TraesCS4A01G266500 chr5A 97.403 77 2 0 722 798 402092655 402092731 6.040000e-27 132.0
31 TraesCS4A01G266500 chr5A 95.556 45 0 2 800 843 665469655 665469612 1.340000e-08 71.3
32 TraesCS4A01G266500 chr2D 97.403 77 2 0 722 798 30303003 30302927 6.040000e-27 132.0
33 TraesCS4A01G266500 chr2D 80.952 126 22 2 1728 1851 633849076 633849201 6.130000e-17 99.0
34 TraesCS4A01G266500 chr2B 100.000 42 0 0 800 841 596932118 596932159 7.980000e-11 78.7
35 TraesCS4A01G266500 chr6D 97.674 43 1 0 800 842 37662260 37662302 1.030000e-09 75.0
36 TraesCS4A01G266500 chr3B 100.000 38 0 0 800 837 22830554 22830517 1.340000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G266500 chr4A 578538799 578541488 2689 False 4968 4968 100.000000 1 2690 1 chr4A.!!$F1 2689
1 TraesCS4A01G266500 chr4D 23418335 23420760 2425 True 845 1214 92.462000 1 2688 3 chr4D.!!$R1 2687
2 TraesCS4A01G266500 chr4B 35520220 35520865 645 True 972 972 94.127000 1 634 1 chr4B.!!$R1 633
3 TraesCS4A01G266500 chr4B 35514360 35515794 1434 True 594 1171 94.652667 1125 2688 3 chr4B.!!$R2 1563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
841 859 0.033405 AACGGAGGGAGTAGCAGCTA 60.033 55.0 0.0 0.0 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1770 1870 0.029167 CGCATTTGTGTGTCTGTGCA 59.971 50.0 0.0 0.0 33.09 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 1.992277 AGCTGTGAGGAGCCGGATT 60.992 57.895 5.05 0.00 40.08 3.01
63 64 1.115467 CTGTGAGGAGCCGGATTAGT 58.885 55.000 5.05 0.00 0.00 2.24
90 91 1.285641 CCCAAATCTTGTGCGCGTT 59.714 52.632 8.43 0.00 0.00 4.84
105 106 2.344203 CGTTGACGAGAGGGAGCCT 61.344 63.158 0.00 0.00 43.02 4.58
159 160 4.711949 CAGCAAGTGAGCCCGGCT 62.712 66.667 13.16 13.16 43.88 5.52
258 262 2.576615 GCAACCTTGAAGAAGTGAGGT 58.423 47.619 0.00 0.00 44.11 3.85
347 351 3.374745 CATTTCACTCACCAGTTGTTGC 58.625 45.455 0.00 0.00 0.00 4.17
349 353 2.418368 TCACTCACCAGTTGTTGCTT 57.582 45.000 0.00 0.00 0.00 3.91
350 354 2.016318 TCACTCACCAGTTGTTGCTTG 58.984 47.619 0.00 0.00 0.00 4.01
351 355 1.066002 CACTCACCAGTTGTTGCTTGG 59.934 52.381 0.00 0.00 0.00 3.61
352 356 0.670162 CTCACCAGTTGTTGCTTGGG 59.330 55.000 0.00 0.00 0.00 4.12
353 357 0.257328 TCACCAGTTGTTGCTTGGGA 59.743 50.000 0.00 0.00 0.00 4.37
356 360 1.493022 ACCAGTTGTTGCTTGGGAGTA 59.507 47.619 0.00 0.00 0.00 2.59
357 361 2.108250 ACCAGTTGTTGCTTGGGAGTAT 59.892 45.455 0.00 0.00 0.00 2.12
537 554 0.306533 GTTTTCGCCTGCTCGTTTCA 59.693 50.000 0.00 0.00 0.00 2.69
548 565 0.949105 CTCGTTTCACGGTTCCAGGG 60.949 60.000 0.00 0.00 42.81 4.45
638 656 3.620488 TGGCACATAGTTTTGGATCTCC 58.380 45.455 0.00 0.00 0.00 3.71
639 657 2.952310 GGCACATAGTTTTGGATCTCCC 59.048 50.000 0.00 0.00 34.29 4.30
640 658 2.614057 GCACATAGTTTTGGATCTCCCG 59.386 50.000 0.00 0.00 37.93 5.14
641 659 3.873910 CACATAGTTTTGGATCTCCCGT 58.126 45.455 0.00 0.00 37.93 5.28
642 660 4.261801 CACATAGTTTTGGATCTCCCGTT 58.738 43.478 0.00 0.00 37.93 4.44
643 661 4.332819 CACATAGTTTTGGATCTCCCGTTC 59.667 45.833 0.00 0.00 37.93 3.95
644 662 4.225267 ACATAGTTTTGGATCTCCCGTTCT 59.775 41.667 0.00 0.00 37.93 3.01
645 663 3.336138 AGTTTTGGATCTCCCGTTCTC 57.664 47.619 0.00 0.00 37.93 2.87
646 664 2.907042 AGTTTTGGATCTCCCGTTCTCT 59.093 45.455 0.00 0.00 37.93 3.10
647 665 3.328050 AGTTTTGGATCTCCCGTTCTCTT 59.672 43.478 0.00 0.00 37.93 2.85
648 666 3.611766 TTTGGATCTCCCGTTCTCTTC 57.388 47.619 0.00 0.00 37.93 2.87
649 667 1.486211 TGGATCTCCCGTTCTCTTCC 58.514 55.000 0.00 0.00 37.93 3.46
650 668 1.007238 TGGATCTCCCGTTCTCTTCCT 59.993 52.381 0.00 0.00 37.93 3.36
651 669 2.112190 GGATCTCCCGTTCTCTTCCTT 58.888 52.381 0.00 0.00 0.00 3.36
652 670 2.159028 GGATCTCCCGTTCTCTTCCTTG 60.159 54.545 0.00 0.00 0.00 3.61
653 671 1.267121 TCTCCCGTTCTCTTCCTTGG 58.733 55.000 0.00 0.00 0.00 3.61
654 672 1.203137 TCTCCCGTTCTCTTCCTTGGA 60.203 52.381 0.00 0.00 0.00 3.53
655 673 1.834263 CTCCCGTTCTCTTCCTTGGAT 59.166 52.381 0.00 0.00 0.00 3.41
656 674 1.831736 TCCCGTTCTCTTCCTTGGATC 59.168 52.381 0.00 0.00 0.00 3.36
657 675 1.555075 CCCGTTCTCTTCCTTGGATCA 59.445 52.381 0.00 0.00 0.00 2.92
658 676 2.171448 CCCGTTCTCTTCCTTGGATCAT 59.829 50.000 0.00 0.00 0.00 2.45
659 677 3.370953 CCCGTTCTCTTCCTTGGATCATT 60.371 47.826 0.00 0.00 0.00 2.57
660 678 4.141711 CCCGTTCTCTTCCTTGGATCATTA 60.142 45.833 0.00 0.00 0.00 1.90
661 679 5.053145 CCGTTCTCTTCCTTGGATCATTAG 58.947 45.833 0.00 0.00 0.00 1.73
662 680 4.509600 CGTTCTCTTCCTTGGATCATTAGC 59.490 45.833 0.00 0.00 0.00 3.09
663 681 5.679601 GTTCTCTTCCTTGGATCATTAGCT 58.320 41.667 0.00 0.00 0.00 3.32
664 682 5.965033 TCTCTTCCTTGGATCATTAGCTT 57.035 39.130 0.00 0.00 0.00 3.74
665 683 5.678583 TCTCTTCCTTGGATCATTAGCTTG 58.321 41.667 0.00 0.00 0.00 4.01
666 684 4.202441 TCTTCCTTGGATCATTAGCTTGC 58.798 43.478 0.00 0.00 0.00 4.01
667 685 3.650281 TCCTTGGATCATTAGCTTGCA 57.350 42.857 0.00 0.00 0.00 4.08
668 686 4.174704 TCCTTGGATCATTAGCTTGCAT 57.825 40.909 0.00 0.00 0.00 3.96
669 687 3.887110 TCCTTGGATCATTAGCTTGCATG 59.113 43.478 0.00 0.00 0.00 4.06
670 688 3.635373 CCTTGGATCATTAGCTTGCATGT 59.365 43.478 0.00 0.00 0.00 3.21
671 689 4.098960 CCTTGGATCATTAGCTTGCATGTT 59.901 41.667 0.00 0.00 0.00 2.71
674 692 5.412640 TGGATCATTAGCTTGCATGTTTTG 58.587 37.500 0.00 0.00 0.00 2.44
682 700 3.935196 GCATGTTTTGCCGTGGTG 58.065 55.556 0.00 0.00 46.15 4.17
683 701 2.309501 GCATGTTTTGCCGTGGTGC 61.310 57.895 0.00 0.00 46.15 5.01
686 704 0.249405 ATGTTTTGCCGTGGTGCTTG 60.249 50.000 0.00 0.00 0.00 4.01
690 708 0.459237 TTTGCCGTGGTGCTTGTTTG 60.459 50.000 0.00 0.00 0.00 2.93
691 709 2.027460 GCCGTGGTGCTTGTTTGG 59.973 61.111 0.00 0.00 0.00 3.28
692 710 2.027460 CCGTGGTGCTTGTTTGGC 59.973 61.111 0.00 0.00 0.00 4.52
696 714 0.675633 GTGGTGCTTGTTTGGCTGAT 59.324 50.000 0.00 0.00 0.00 2.90
703 721 3.205338 GCTTGTTTGGCTGATTGGTTTT 58.795 40.909 0.00 0.00 0.00 2.43
704 722 3.248363 GCTTGTTTGGCTGATTGGTTTTC 59.752 43.478 0.00 0.00 0.00 2.29
705 723 4.440880 CTTGTTTGGCTGATTGGTTTTCA 58.559 39.130 0.00 0.00 0.00 2.69
706 724 4.686191 TGTTTGGCTGATTGGTTTTCAT 57.314 36.364 0.00 0.00 0.00 2.57
707 725 5.033589 TGTTTGGCTGATTGGTTTTCATT 57.966 34.783 0.00 0.00 0.00 2.57
709 727 3.681593 TGGCTGATTGGTTTTCATTGG 57.318 42.857 0.00 0.00 0.00 3.16
711 729 4.155709 TGGCTGATTGGTTTTCATTGGTA 58.844 39.130 0.00 0.00 0.00 3.25
713 731 4.165779 GCTGATTGGTTTTCATTGGTACG 58.834 43.478 0.00 0.00 0.00 3.67
714 732 4.320935 GCTGATTGGTTTTCATTGGTACGT 60.321 41.667 0.00 0.00 0.00 3.57
715 733 5.106475 GCTGATTGGTTTTCATTGGTACGTA 60.106 40.000 0.00 0.00 0.00 3.57
716 734 6.243811 TGATTGGTTTTCATTGGTACGTAC 57.756 37.500 17.56 17.56 0.00 3.67
719 737 4.317488 TGGTTTTCATTGGTACGTACTCC 58.683 43.478 24.07 10.32 0.00 3.85
720 738 3.686241 GGTTTTCATTGGTACGTACTCCC 59.314 47.826 24.07 9.58 0.00 4.30
722 740 5.337491 GGTTTTCATTGGTACGTACTCCCTA 60.337 44.000 24.07 6.50 0.00 3.53
725 743 4.603131 TCATTGGTACGTACTCCCTACTT 58.397 43.478 24.07 0.13 0.00 2.24
726 744 4.400251 TCATTGGTACGTACTCCCTACTTG 59.600 45.833 24.07 11.15 0.00 3.16
727 745 3.439857 TGGTACGTACTCCCTACTTGT 57.560 47.619 24.07 0.00 0.00 3.16
728 746 3.347216 TGGTACGTACTCCCTACTTGTC 58.653 50.000 24.07 4.66 0.00 3.18
729 747 3.009473 TGGTACGTACTCCCTACTTGTCT 59.991 47.826 24.07 0.00 0.00 3.41
731 749 2.354259 ACGTACTCCCTACTTGTCTCG 58.646 52.381 0.00 0.00 0.00 4.04
732 750 1.669779 CGTACTCCCTACTTGTCTCGG 59.330 57.143 0.00 0.00 0.00 4.63
733 751 2.679059 CGTACTCCCTACTTGTCTCGGA 60.679 54.545 0.00 0.00 0.00 4.55
735 753 3.947612 ACTCCCTACTTGTCTCGGATA 57.052 47.619 0.00 0.00 0.00 2.59
736 754 4.456662 ACTCCCTACTTGTCTCGGATAT 57.543 45.455 0.00 0.00 0.00 1.63
737 755 4.145807 ACTCCCTACTTGTCTCGGATATG 58.854 47.826 0.00 0.00 0.00 1.78
739 757 3.139584 TCCCTACTTGTCTCGGATATGGA 59.860 47.826 0.00 0.00 0.00 3.41
740 758 4.090090 CCCTACTTGTCTCGGATATGGAT 58.910 47.826 0.00 0.00 0.00 3.41
741 759 4.081972 CCCTACTTGTCTCGGATATGGATG 60.082 50.000 0.00 0.00 0.00 3.51
742 760 4.524714 CCTACTTGTCTCGGATATGGATGT 59.475 45.833 0.00 0.00 0.00 3.06
744 762 6.378564 CCTACTTGTCTCGGATATGGATGTAT 59.621 42.308 0.00 0.00 0.00 2.29
745 763 6.274157 ACTTGTCTCGGATATGGATGTATC 57.726 41.667 0.00 0.00 0.00 2.24
747 765 7.175797 ACTTGTCTCGGATATGGATGTATCTA 58.824 38.462 0.00 0.00 32.78 1.98
748 766 7.338196 ACTTGTCTCGGATATGGATGTATCTAG 59.662 40.741 0.00 0.00 32.78 2.43
749 767 6.958767 TGTCTCGGATATGGATGTATCTAGA 58.041 40.000 0.00 0.00 32.78 2.43
750 768 7.402862 TGTCTCGGATATGGATGTATCTAGAA 58.597 38.462 0.00 0.00 31.35 2.10
751 769 7.337184 TGTCTCGGATATGGATGTATCTAGAAC 59.663 40.741 0.00 0.00 31.35 3.01
753 771 8.769359 TCTCGGATATGGATGTATCTAGAACTA 58.231 37.037 0.00 0.00 32.78 2.24
755 773 9.749340 TCGGATATGGATGTATCTAGAACTAAA 57.251 33.333 0.00 0.00 32.78 1.85
773 791 9.717942 AGAACTAAAATACATCTAGATGCATCC 57.282 33.333 28.86 5.58 42.39 3.51
774 792 9.494271 GAACTAAAATACATCTAGATGCATCCA 57.506 33.333 28.86 9.05 42.39 3.41
779 797 9.584008 AAAATACATCTAGATGCATCCATTTCT 57.416 29.630 28.86 10.75 42.39 2.52
780 798 8.563123 AATACATCTAGATGCATCCATTTCTG 57.437 34.615 28.86 14.70 42.39 3.02
781 799 4.760715 ACATCTAGATGCATCCATTTCTGC 59.239 41.667 28.86 0.00 42.39 4.26
782 800 3.396560 TCTAGATGCATCCATTTCTGCG 58.603 45.455 23.06 0.92 41.32 5.18
783 801 2.336945 AGATGCATCCATTTCTGCGA 57.663 45.000 23.06 0.00 41.32 5.10
787 805 1.469703 TGCATCCATTTCTGCGACAAG 59.530 47.619 0.00 0.00 41.32 3.16
795 813 4.788100 CCATTTCTGCGACAAGTAATTTCG 59.212 41.667 0.00 4.05 35.82 3.46
796 814 5.390461 CCATTTCTGCGACAAGTAATTTCGA 60.390 40.000 10.25 0.00 34.62 3.71
797 815 5.660629 TTTCTGCGACAAGTAATTTCGAA 57.339 34.783 0.00 0.00 34.62 3.71
798 816 4.903638 TCTGCGACAAGTAATTTCGAAG 57.096 40.909 0.00 9.27 39.43 3.79
799 817 3.122948 TCTGCGACAAGTAATTTCGAAGC 59.877 43.478 0.00 0.00 38.17 3.86
800 818 2.803386 TGCGACAAGTAATTTCGAAGCA 59.197 40.909 0.00 0.00 34.62 3.91
801 819 3.435327 TGCGACAAGTAATTTCGAAGCAT 59.565 39.130 0.00 0.00 34.62 3.79
802 820 4.083537 TGCGACAAGTAATTTCGAAGCATT 60.084 37.500 0.00 0.00 34.62 3.56
803 821 4.851558 GCGACAAGTAATTTCGAAGCATTT 59.148 37.500 0.00 0.00 34.62 2.32
804 822 5.002561 GCGACAAGTAATTTCGAAGCATTTC 59.997 40.000 0.00 0.00 34.62 2.17
805 823 6.307155 CGACAAGTAATTTCGAAGCATTTCT 58.693 36.000 0.00 0.00 34.62 2.52
806 824 6.247165 CGACAAGTAATTTCGAAGCATTTCTG 59.753 38.462 0.00 0.00 34.62 3.02
807 825 9.011406 CGACAAGTAATTTCGAAGCATTTCTGC 62.011 40.741 0.00 0.00 40.79 4.26
820 838 5.671093 GCATTTCTGCGACAAGTAATTTC 57.329 39.130 0.00 0.00 38.92 2.17
821 839 4.260656 GCATTTCTGCGACAAGTAATTTCG 59.739 41.667 0.00 4.05 38.92 3.46
822 840 5.617609 CATTTCTGCGACAAGTAATTTCGA 58.382 37.500 10.25 0.00 34.62 3.71
823 841 5.660629 TTTCTGCGACAAGTAATTTCGAA 57.339 34.783 0.00 0.00 34.62 3.71
824 842 4.640805 TCTGCGACAAGTAATTTCGAAC 57.359 40.909 0.00 0.00 34.62 3.95
825 843 3.120616 TCTGCGACAAGTAATTTCGAACG 59.879 43.478 0.00 0.00 34.62 3.95
826 844 2.156117 TGCGACAAGTAATTTCGAACGG 59.844 45.455 0.00 0.00 34.62 4.44
827 845 2.409378 GCGACAAGTAATTTCGAACGGA 59.591 45.455 0.00 0.00 34.62 4.69
828 846 3.481467 GCGACAAGTAATTTCGAACGGAG 60.481 47.826 0.00 0.00 34.62 4.63
829 847 3.060363 CGACAAGTAATTTCGAACGGAGG 59.940 47.826 0.00 0.00 34.62 4.30
830 848 3.332034 ACAAGTAATTTCGAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
831 849 3.007182 ACAAGTAATTTCGAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
832 850 3.521947 AGTAATTTCGAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
833 851 2.830321 AGTAATTTCGAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
834 852 4.019174 AGTAATTTCGAACGGAGGGAGTA 58.981 43.478 0.00 0.00 0.00 2.59
835 853 3.521947 AATTTCGAACGGAGGGAGTAG 57.478 47.619 0.00 0.00 0.00 2.57
836 854 0.529378 TTTCGAACGGAGGGAGTAGC 59.471 55.000 0.00 0.00 0.00 3.58
837 855 0.609957 TTCGAACGGAGGGAGTAGCA 60.610 55.000 0.00 0.00 0.00 3.49
838 856 1.030488 TCGAACGGAGGGAGTAGCAG 61.030 60.000 0.00 0.00 0.00 4.24
839 857 1.142097 GAACGGAGGGAGTAGCAGC 59.858 63.158 0.00 0.00 0.00 5.25
840 858 1.305381 AACGGAGGGAGTAGCAGCT 60.305 57.895 0.00 0.00 0.00 4.24
841 859 0.033405 AACGGAGGGAGTAGCAGCTA 60.033 55.000 0.00 0.00 0.00 3.32
842 860 0.033405 ACGGAGGGAGTAGCAGCTAA 60.033 55.000 2.87 0.00 0.00 3.09
843 861 0.386113 CGGAGGGAGTAGCAGCTAAC 59.614 60.000 2.87 1.51 0.00 2.34
844 862 1.486211 GGAGGGAGTAGCAGCTAACA 58.514 55.000 2.87 0.00 0.00 2.41
845 863 1.831736 GGAGGGAGTAGCAGCTAACAA 59.168 52.381 2.87 0.00 0.00 2.83
846 864 2.236395 GGAGGGAGTAGCAGCTAACAAA 59.764 50.000 2.87 0.00 0.00 2.83
847 865 3.307480 GGAGGGAGTAGCAGCTAACAAAA 60.307 47.826 2.87 0.00 0.00 2.44
848 866 4.324267 GAGGGAGTAGCAGCTAACAAAAA 58.676 43.478 2.87 0.00 0.00 1.94
849 867 4.923415 AGGGAGTAGCAGCTAACAAAAAT 58.077 39.130 2.87 0.00 0.00 1.82
850 868 5.325239 AGGGAGTAGCAGCTAACAAAAATT 58.675 37.500 2.87 0.00 0.00 1.82
851 869 5.416013 AGGGAGTAGCAGCTAACAAAAATTC 59.584 40.000 2.87 0.00 0.00 2.17
852 870 5.416013 GGGAGTAGCAGCTAACAAAAATTCT 59.584 40.000 2.87 0.00 0.00 2.40
853 871 6.317857 GGAGTAGCAGCTAACAAAAATTCTG 58.682 40.000 2.87 0.00 0.00 3.02
854 872 6.149474 GGAGTAGCAGCTAACAAAAATTCTGA 59.851 38.462 2.87 0.00 0.00 3.27
855 873 7.148171 GGAGTAGCAGCTAACAAAAATTCTGAT 60.148 37.037 2.87 0.00 0.00 2.90
856 874 7.756558 AGTAGCAGCTAACAAAAATTCTGATC 58.243 34.615 2.87 0.00 0.00 2.92
857 875 6.830873 AGCAGCTAACAAAAATTCTGATCT 57.169 33.333 0.00 0.00 0.00 2.75
858 876 6.618811 AGCAGCTAACAAAAATTCTGATCTG 58.381 36.000 0.00 0.00 0.00 2.90
859 877 5.287992 GCAGCTAACAAAAATTCTGATCTGC 59.712 40.000 0.00 0.00 35.89 4.26
860 878 5.510674 CAGCTAACAAAAATTCTGATCTGCG 59.489 40.000 0.00 0.00 0.00 5.18
861 879 5.182001 AGCTAACAAAAATTCTGATCTGCGT 59.818 36.000 0.00 0.00 0.00 5.24
862 880 6.371548 AGCTAACAAAAATTCTGATCTGCGTA 59.628 34.615 0.00 0.00 0.00 4.42
863 881 7.021196 GCTAACAAAAATTCTGATCTGCGTAA 58.979 34.615 0.00 0.00 0.00 3.18
864 882 7.698130 GCTAACAAAAATTCTGATCTGCGTAAT 59.302 33.333 0.00 0.00 0.00 1.89
865 883 7.801547 AACAAAAATTCTGATCTGCGTAATG 57.198 32.000 0.00 0.00 0.00 1.90
866 884 7.144722 ACAAAAATTCTGATCTGCGTAATGA 57.855 32.000 0.00 0.00 0.00 2.57
867 885 7.765307 ACAAAAATTCTGATCTGCGTAATGAT 58.235 30.769 0.00 0.00 0.00 2.45
868 886 7.699391 ACAAAAATTCTGATCTGCGTAATGATG 59.301 33.333 0.00 0.00 0.00 3.07
869 887 7.558161 AAAATTCTGATCTGCGTAATGATGA 57.442 32.000 0.00 0.00 0.00 2.92
870 888 7.741027 AAATTCTGATCTGCGTAATGATGAT 57.259 32.000 0.00 0.00 0.00 2.45
871 889 8.837788 AAATTCTGATCTGCGTAATGATGATA 57.162 30.769 0.00 0.00 0.00 2.15
872 890 7.824704 ATTCTGATCTGCGTAATGATGATAC 57.175 36.000 0.00 0.00 0.00 2.24
873 891 6.331369 TCTGATCTGCGTAATGATGATACA 57.669 37.500 0.00 0.00 0.00 2.29
874 892 6.928520 TCTGATCTGCGTAATGATGATACAT 58.071 36.000 0.00 0.00 0.00 2.29
875 893 7.031975 TCTGATCTGCGTAATGATGATACATC 58.968 38.462 4.98 4.98 0.00 3.06
876 894 6.928520 TGATCTGCGTAATGATGATACATCT 58.071 36.000 11.98 0.00 0.00 2.90
877 895 7.031975 TGATCTGCGTAATGATGATACATCTC 58.968 38.462 11.98 0.29 0.00 2.75
878 896 5.393962 TCTGCGTAATGATGATACATCTCG 58.606 41.667 11.98 11.48 33.38 4.04
879 897 5.048713 TCTGCGTAATGATGATACATCTCGT 60.049 40.000 11.98 1.99 33.09 4.18
880 898 5.154222 TGCGTAATGATGATACATCTCGTC 58.846 41.667 11.98 0.00 33.09 4.20
881 899 4.559251 GCGTAATGATGATACATCTCGTCC 59.441 45.833 11.98 0.00 33.09 4.79
882 900 5.699839 CGTAATGATGATACATCTCGTCCA 58.300 41.667 11.98 0.00 31.38 4.02
883 901 6.325596 CGTAATGATGATACATCTCGTCCAT 58.674 40.000 11.98 0.00 31.38 3.41
884 902 6.252228 CGTAATGATGATACATCTCGTCCATG 59.748 42.308 11.98 0.00 31.38 3.66
885 903 4.525912 TGATGATACATCTCGTCCATGG 57.474 45.455 4.97 4.97 31.38 3.66
886 904 2.820059 TGATACATCTCGTCCATGGC 57.180 50.000 6.96 0.96 0.00 4.40
887 905 2.038659 TGATACATCTCGTCCATGGCA 58.961 47.619 6.96 0.00 0.00 4.92
888 906 2.036346 TGATACATCTCGTCCATGGCAG 59.964 50.000 6.96 3.12 0.00 4.85
889 907 0.104855 TACATCTCGTCCATGGCAGC 59.895 55.000 6.96 0.00 0.00 5.25
890 908 1.153309 CATCTCGTCCATGGCAGCA 60.153 57.895 6.96 0.00 0.00 4.41
891 909 1.145598 ATCTCGTCCATGGCAGCAG 59.854 57.895 6.96 0.00 0.00 4.24
892 910 1.332889 ATCTCGTCCATGGCAGCAGA 61.333 55.000 6.96 5.94 0.00 4.26
893 911 1.078918 CTCGTCCATGGCAGCAGAA 60.079 57.895 6.96 0.00 0.00 3.02
894 912 0.674581 CTCGTCCATGGCAGCAGAAA 60.675 55.000 6.96 0.00 0.00 2.52
896 914 1.509923 GTCCATGGCAGCAGAAAGC 59.490 57.895 6.96 0.00 46.19 3.51
909 927 1.538950 CAGAAAGCCAAGGTGAAGCTC 59.461 52.381 0.00 0.00 35.30 4.09
910 928 0.884514 GAAAGCCAAGGTGAAGCTCC 59.115 55.000 0.00 0.00 35.30 4.70
911 929 0.480252 AAAGCCAAGGTGAAGCTCCT 59.520 50.000 0.00 0.00 35.30 3.69
918 936 1.352083 AGGTGAAGCTCCTTGTGCTA 58.648 50.000 0.00 0.00 40.22 3.49
919 937 1.699634 AGGTGAAGCTCCTTGTGCTAA 59.300 47.619 0.00 0.00 40.22 3.09
922 940 4.019321 AGGTGAAGCTCCTTGTGCTAATAA 60.019 41.667 0.00 0.00 40.22 1.40
923 941 4.884164 GGTGAAGCTCCTTGTGCTAATAAT 59.116 41.667 0.00 0.00 40.22 1.28
924 942 6.055588 GGTGAAGCTCCTTGTGCTAATAATA 58.944 40.000 0.00 0.00 40.22 0.98
925 943 6.017852 GGTGAAGCTCCTTGTGCTAATAATAC 60.018 42.308 0.00 0.00 40.22 1.89
931 949 5.666462 TCCTTGTGCTAATAATACTGCGAA 58.334 37.500 0.00 0.00 0.00 4.70
932 950 5.522460 TCCTTGTGCTAATAATACTGCGAAC 59.478 40.000 0.00 0.00 0.00 3.95
933 951 5.383984 TTGTGCTAATAATACTGCGAACG 57.616 39.130 0.00 0.00 0.00 3.95
934 952 4.674475 TGTGCTAATAATACTGCGAACGA 58.326 39.130 0.00 0.00 0.00 3.85
935 953 5.103687 TGTGCTAATAATACTGCGAACGAA 58.896 37.500 0.00 0.00 0.00 3.85
936 954 5.751509 TGTGCTAATAATACTGCGAACGAAT 59.248 36.000 0.00 0.00 0.00 3.34
937 955 6.065153 GTGCTAATAATACTGCGAACGAATG 58.935 40.000 0.00 0.00 0.00 2.67
939 957 3.770765 ATAATACTGCGAACGAATGCG 57.229 42.857 0.00 0.00 44.79 4.73
941 959 0.921347 ATACTGCGAACGAATGCGAC 59.079 50.000 0.00 0.00 41.64 5.19
946 964 1.058057 GCGAACGAATGCGACCAAAC 61.058 55.000 0.00 0.00 41.64 2.93
947 965 0.233590 CGAACGAATGCGACCAAACA 59.766 50.000 0.00 0.00 41.64 2.83
971 996 1.526225 GCGCCTTATCCTCCCAACC 60.526 63.158 0.00 0.00 0.00 3.77
972 997 1.912220 CGCCTTATCCTCCCAACCA 59.088 57.895 0.00 0.00 0.00 3.67
974 999 1.747206 CGCCTTATCCTCCCAACCAAG 60.747 57.143 0.00 0.00 0.00 3.61
1010 1052 1.818363 CCAGCATCATGAGCAGCGT 60.818 57.895 16.20 3.13 0.00 5.07
1011 1053 1.642215 CAGCATCATGAGCAGCGTC 59.358 57.895 16.20 0.00 0.00 5.19
1012 1054 1.087771 CAGCATCATGAGCAGCGTCA 61.088 55.000 16.20 0.00 0.00 4.35
1014 1056 1.088340 GCATCATGAGCAGCGTCACT 61.088 55.000 0.09 0.00 0.00 3.41
1103 1145 4.963428 GCGGTCCCTATTCCGGCG 62.963 72.222 0.00 0.00 45.85 6.46
1313 1370 1.135053 GCTCGTCTTCAAGGTACTCCC 60.135 57.143 0.00 0.00 38.49 4.30
1315 1372 2.424246 CTCGTCTTCAAGGTACTCCCTC 59.576 54.545 0.00 0.00 45.47 4.30
1316 1373 1.477295 CGTCTTCAAGGTACTCCCTCC 59.523 57.143 0.00 0.00 45.47 4.30
1318 1375 1.076677 TCTTCAAGGTACTCCCTCCGT 59.923 52.381 0.00 0.00 45.47 4.69
1319 1376 1.477295 CTTCAAGGTACTCCCTCCGTC 59.523 57.143 0.00 0.00 45.47 4.79
1321 1378 0.818296 CAAGGTACTCCCTCCGTCTG 59.182 60.000 0.00 0.00 45.47 3.51
1324 1381 0.324091 GGTACTCCCTCCGTCTGGAA 60.324 60.000 0.00 0.00 45.87 3.53
1325 1382 1.553706 GTACTCCCTCCGTCTGGAAA 58.446 55.000 0.00 0.00 45.87 3.13
1326 1383 2.108970 GTACTCCCTCCGTCTGGAAAT 58.891 52.381 0.00 0.00 45.87 2.17
1327 1384 2.544844 ACTCCCTCCGTCTGGAAATA 57.455 50.000 0.00 0.00 45.87 1.40
1328 1385 2.108970 ACTCCCTCCGTCTGGAAATAC 58.891 52.381 0.00 0.00 45.87 1.89
1329 1386 2.292323 ACTCCCTCCGTCTGGAAATACT 60.292 50.000 0.00 0.00 45.87 2.12
1330 1387 2.766828 CTCCCTCCGTCTGGAAATACTT 59.233 50.000 0.00 0.00 45.87 2.24
1331 1388 2.500098 TCCCTCCGTCTGGAAATACTTG 59.500 50.000 0.00 0.00 45.87 3.16
1332 1389 2.236395 CCCTCCGTCTGGAAATACTTGT 59.764 50.000 0.00 0.00 45.87 3.16
1333 1390 3.522553 CCTCCGTCTGGAAATACTTGTC 58.477 50.000 0.00 0.00 45.87 3.18
1334 1391 3.056107 CCTCCGTCTGGAAATACTTGTCA 60.056 47.826 0.00 0.00 45.87 3.58
1335 1392 4.383118 CCTCCGTCTGGAAATACTTGTCAT 60.383 45.833 0.00 0.00 45.87 3.06
1336 1393 5.160607 TCCGTCTGGAAATACTTGTCATT 57.839 39.130 0.00 0.00 42.85 2.57
1337 1394 6.288941 TCCGTCTGGAAATACTTGTCATTA 57.711 37.500 0.00 0.00 42.85 1.90
1338 1395 6.703319 TCCGTCTGGAAATACTTGTCATTAA 58.297 36.000 0.00 0.00 42.85 1.40
1339 1396 7.162761 TCCGTCTGGAAATACTTGTCATTAAA 58.837 34.615 0.00 0.00 42.85 1.52
1340 1397 7.118680 TCCGTCTGGAAATACTTGTCATTAAAC 59.881 37.037 0.00 0.00 42.85 2.01
1341 1398 7.119262 CCGTCTGGAAATACTTGTCATTAAACT 59.881 37.037 0.00 0.00 37.49 2.66
1342 1399 7.957484 CGTCTGGAAATACTTGTCATTAAACTG 59.043 37.037 0.00 0.00 0.00 3.16
1343 1400 8.237267 GTCTGGAAATACTTGTCATTAAACTGG 58.763 37.037 0.00 0.00 0.00 4.00
1344 1401 8.160765 TCTGGAAATACTTGTCATTAAACTGGA 58.839 33.333 0.00 0.00 0.00 3.86
1345 1402 8.877864 TGGAAATACTTGTCATTAAACTGGAT 57.122 30.769 0.00 0.00 0.00 3.41
1346 1403 9.967451 TGGAAATACTTGTCATTAAACTGGATA 57.033 29.630 0.00 0.00 0.00 2.59
1421 1478 9.826574 ATCCATTTTGATGACAAATATTTCTGG 57.173 29.630 0.00 0.00 43.99 3.86
1422 1479 9.033711 TCCATTTTGATGACAAATATTTCTGGA 57.966 29.630 0.00 0.00 43.99 3.86
1423 1480 9.090692 CCATTTTGATGACAAATATTTCTGGAC 57.909 33.333 0.00 0.00 43.99 4.02
1424 1481 8.800972 CATTTTGATGACAAATATTTCTGGACG 58.199 33.333 0.00 0.00 43.99 4.79
1425 1482 6.435430 TTGATGACAAATATTTCTGGACGG 57.565 37.500 0.00 0.00 32.73 4.79
1426 1483 5.739959 TGATGACAAATATTTCTGGACGGA 58.260 37.500 0.00 0.00 0.00 4.69
1427 1484 5.817296 TGATGACAAATATTTCTGGACGGAG 59.183 40.000 0.00 0.00 0.00 4.63
1428 1485 4.513442 TGACAAATATTTCTGGACGGAGG 58.487 43.478 0.00 0.00 0.00 4.30
1429 1486 3.877508 GACAAATATTTCTGGACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1430 1487 3.521937 ACAAATATTTCTGGACGGAGGGA 59.478 43.478 0.00 0.00 0.00 4.20
1431 1488 4.130118 CAAATATTTCTGGACGGAGGGAG 58.870 47.826 0.00 0.00 0.00 4.30
1432 1489 2.544844 TATTTCTGGACGGAGGGAGT 57.455 50.000 0.00 0.00 0.00 3.85
1433 1490 2.544844 ATTTCTGGACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
1434 1491 1.553706 TTTCTGGACGGAGGGAGTAC 58.446 55.000 0.00 0.00 0.00 2.73
1435 1492 0.702902 TTCTGGACGGAGGGAGTACT 59.297 55.000 0.00 0.00 0.00 2.73
1436 1493 0.255318 TCTGGACGGAGGGAGTACTC 59.745 60.000 14.87 14.87 36.76 2.59
1461 1518 2.125912 GATCGACCAGCGCACACT 60.126 61.111 11.47 0.00 40.61 3.55
1485 1542 1.419374 CGCGTTGCTTCTTCTACACT 58.581 50.000 0.00 0.00 0.00 3.55
1486 1543 1.125021 CGCGTTGCTTCTTCTACACTG 59.875 52.381 0.00 0.00 0.00 3.66
1488 1545 2.996621 GCGTTGCTTCTTCTACACTGAT 59.003 45.455 0.00 0.00 0.00 2.90
1489 1546 3.181526 GCGTTGCTTCTTCTACACTGATG 60.182 47.826 0.00 0.00 0.00 3.07
1491 1548 2.610433 TGCTTCTTCTACACTGATGCG 58.390 47.619 0.00 0.00 34.82 4.73
1492 1549 1.325943 GCTTCTTCTACACTGATGCGC 59.674 52.381 0.00 0.00 0.00 6.09
1493 1550 1.585668 CTTCTTCTACACTGATGCGCG 59.414 52.381 0.00 0.00 0.00 6.86
1497 1554 1.059369 CTACACTGATGCGCGTTGC 59.941 57.895 8.43 0.00 46.70 4.17
1691 1764 0.466124 AAGAGCCGACTCCAATAGCC 59.534 55.000 0.00 0.00 44.65 3.93
1701 1801 4.816385 CGACTCCAATAGCCAAACATGTAT 59.184 41.667 0.00 0.00 0.00 2.29
1703 1803 5.754782 ACTCCAATAGCCAAACATGTATCA 58.245 37.500 0.00 0.00 0.00 2.15
1705 1805 4.887071 TCCAATAGCCAAACATGTATCACC 59.113 41.667 0.00 0.00 0.00 4.02
1710 1810 3.009473 AGCCAAACATGTATCACCTCTGT 59.991 43.478 0.00 0.00 0.00 3.41
1712 1812 4.218417 GCCAAACATGTATCACCTCTGTTT 59.782 41.667 0.00 0.00 39.81 2.83
1714 1814 6.151691 CCAAACATGTATCACCTCTGTTTTG 58.848 40.000 0.00 0.00 37.80 2.44
1715 1815 6.016360 CCAAACATGTATCACCTCTGTTTTGA 60.016 38.462 0.00 0.00 37.80 2.69
1716 1816 7.424803 CAAACATGTATCACCTCTGTTTTGAA 58.575 34.615 0.00 0.00 37.80 2.69
1718 1818 7.383102 ACATGTATCACCTCTGTTTTGAATC 57.617 36.000 0.00 0.00 0.00 2.52
1721 1821 6.295249 TGTATCACCTCTGTTTTGAATCACA 58.705 36.000 0.00 0.00 0.00 3.58
1723 1823 5.756195 TCACCTCTGTTTTGAATCACAAG 57.244 39.130 0.00 0.00 39.77 3.16
1724 1824 5.436175 TCACCTCTGTTTTGAATCACAAGA 58.564 37.500 0.00 0.00 39.77 3.02
1727 1827 4.273480 CCTCTGTTTTGAATCACAAGACGT 59.727 41.667 0.00 0.00 43.58 4.34
1731 1831 7.087639 TCTGTTTTGAATCACAAGACGTTTTT 58.912 30.769 0.00 0.00 43.58 1.94
1732 1832 7.043454 TGTTTTGAATCACAAGACGTTTTTG 57.957 32.000 10.96 10.96 43.58 2.44
1733 1833 6.090088 TGTTTTGAATCACAAGACGTTTTTGG 59.910 34.615 15.36 7.08 43.58 3.28
1734 1834 5.568685 TTGAATCACAAGACGTTTTTGGA 57.431 34.783 15.36 10.89 34.20 3.53
1735 1835 5.766150 TGAATCACAAGACGTTTTTGGAT 57.234 34.783 15.36 12.18 0.00 3.41
1736 1836 6.869315 TGAATCACAAGACGTTTTTGGATA 57.131 33.333 15.36 4.06 0.00 2.59
1737 1837 7.447374 TGAATCACAAGACGTTTTTGGATAT 57.553 32.000 15.36 5.71 0.00 1.63
1739 1839 6.817765 ATCACAAGACGTTTTTGGATATGT 57.182 33.333 15.36 0.00 0.00 2.29
1740 1840 6.236017 TCACAAGACGTTTTTGGATATGTC 57.764 37.500 15.36 0.00 0.00 3.06
1741 1841 5.760743 TCACAAGACGTTTTTGGATATGTCA 59.239 36.000 15.36 0.00 33.68 3.58
1742 1842 6.261158 TCACAAGACGTTTTTGGATATGTCAA 59.739 34.615 15.36 0.00 33.68 3.18
1743 1843 7.040755 TCACAAGACGTTTTTGGATATGTCAAT 60.041 33.333 15.36 0.00 33.68 2.57
1744 1844 8.233868 CACAAGACGTTTTTGGATATGTCAATA 58.766 33.333 15.36 0.00 33.68 1.90
1745 1845 8.956426 ACAAGACGTTTTTGGATATGTCAATAT 58.044 29.630 15.36 0.00 33.68 1.28
1746 1846 9.225201 CAAGACGTTTTTGGATATGTCAATATG 57.775 33.333 0.00 0.00 33.68 1.78
1747 1847 7.930217 AGACGTTTTTGGATATGTCAATATGG 58.070 34.615 0.00 0.00 33.68 2.74
1748 1848 7.773224 AGACGTTTTTGGATATGTCAATATGGA 59.227 33.333 0.00 0.00 33.68 3.41
1749 1849 7.703328 ACGTTTTTGGATATGTCAATATGGAC 58.297 34.615 2.99 2.99 38.29 4.02
1750 1850 7.556275 ACGTTTTTGGATATGTCAATATGGACT 59.444 33.333 11.58 0.39 38.61 3.85
1751 1851 9.051679 CGTTTTTGGATATGTCAATATGGACTA 57.948 33.333 11.58 2.51 38.61 2.59
1753 1853 9.913310 TTTTTGGATATGTCAATATGGACTACA 57.087 29.630 11.58 0.00 38.61 2.74
1755 1855 9.506018 TTTGGATATGTCAATATGGACTACATG 57.494 33.333 11.58 0.00 40.82 3.21
1756 1856 7.105588 TGGATATGTCAATATGGACTACATGC 58.894 38.462 11.58 7.56 40.82 4.06
1757 1857 6.256539 GGATATGTCAATATGGACTACATGCG 59.743 42.308 11.58 0.00 40.82 4.73
1758 1858 4.664150 TGTCAATATGGACTACATGCGA 57.336 40.909 11.58 0.00 40.82 5.10
1759 1859 5.017294 TGTCAATATGGACTACATGCGAA 57.983 39.130 11.58 0.00 40.82 4.70
1760 1860 4.808895 TGTCAATATGGACTACATGCGAAC 59.191 41.667 11.58 0.00 40.82 3.95
1761 1861 5.050490 GTCAATATGGACTACATGCGAACT 58.950 41.667 2.71 0.00 40.82 3.01
1762 1862 6.183360 TGTCAATATGGACTACATGCGAACTA 60.183 38.462 11.58 0.00 40.82 2.24
1763 1863 6.700081 GTCAATATGGACTACATGCGAACTAA 59.300 38.462 2.71 0.00 40.82 2.24
1764 1864 7.223971 GTCAATATGGACTACATGCGAACTAAA 59.776 37.037 2.71 0.00 40.82 1.85
1765 1865 7.766738 TCAATATGGACTACATGCGAACTAAAA 59.233 33.333 0.00 0.00 40.82 1.52
1766 1866 8.559536 CAATATGGACTACATGCGAACTAAAAT 58.440 33.333 0.00 0.00 40.82 1.82
1767 1867 5.794687 TGGACTACATGCGAACTAAAATG 57.205 39.130 0.00 0.00 0.00 2.32
1768 1868 5.483811 TGGACTACATGCGAACTAAAATGA 58.516 37.500 0.00 0.00 0.00 2.57
1769 1869 5.580691 TGGACTACATGCGAACTAAAATGAG 59.419 40.000 0.00 0.00 0.00 2.90
1770 1870 5.581085 GGACTACATGCGAACTAAAATGAGT 59.419 40.000 0.00 0.00 0.00 3.41
1771 1871 6.408858 ACTACATGCGAACTAAAATGAGTG 57.591 37.500 0.00 0.00 0.00 3.51
1772 1872 4.083581 ACATGCGAACTAAAATGAGTGC 57.916 40.909 0.00 0.00 0.00 4.40
1773 1873 3.501828 ACATGCGAACTAAAATGAGTGCA 59.498 39.130 0.00 0.00 34.13 4.57
1774 1874 3.536158 TGCGAACTAAAATGAGTGCAC 57.464 42.857 9.40 9.40 0.00 4.57
1775 1875 2.875317 TGCGAACTAAAATGAGTGCACA 59.125 40.909 21.04 0.00 0.00 4.57
1776 1876 3.058983 TGCGAACTAAAATGAGTGCACAG 60.059 43.478 21.04 8.12 0.00 3.66
1777 1877 3.186409 GCGAACTAAAATGAGTGCACAGA 59.814 43.478 21.04 4.76 0.00 3.41
1778 1878 4.702392 CGAACTAAAATGAGTGCACAGAC 58.298 43.478 21.04 10.50 0.00 3.51
1779 1879 4.211164 CGAACTAAAATGAGTGCACAGACA 59.789 41.667 21.04 15.88 0.00 3.41
1780 1880 5.424121 AACTAAAATGAGTGCACAGACAC 57.576 39.130 21.04 5.42 41.02 3.67
1781 1881 4.450976 ACTAAAATGAGTGCACAGACACA 58.549 39.130 21.04 10.91 43.23 3.72
1782 1882 3.698029 AAAATGAGTGCACAGACACAC 57.302 42.857 21.04 1.90 43.23 3.82
1783 1883 2.330440 AATGAGTGCACAGACACACA 57.670 45.000 21.04 7.46 43.64 3.72
1784 1884 2.330440 ATGAGTGCACAGACACACAA 57.670 45.000 21.04 0.00 42.93 3.33
1785 1885 2.106477 TGAGTGCACAGACACACAAA 57.894 45.000 21.04 0.00 43.23 2.83
1786 1886 2.642427 TGAGTGCACAGACACACAAAT 58.358 42.857 21.04 0.00 43.23 2.32
1787 1887 2.355444 TGAGTGCACAGACACACAAATG 59.645 45.455 21.04 0.00 43.23 2.32
1788 1888 1.066002 AGTGCACAGACACACAAATGC 59.934 47.619 21.04 0.00 43.23 3.56
1789 1889 0.029167 TGCACAGACACACAAATGCG 59.971 50.000 0.00 0.00 35.83 4.73
1790 1890 0.029300 GCACAGACACACAAATGCGT 59.971 50.000 0.00 0.00 0.00 5.24
1791 1891 1.921573 GCACAGACACACAAATGCGTC 60.922 52.381 0.00 0.00 38.04 5.19
1792 1892 1.599071 CACAGACACACAAATGCGTCT 59.401 47.619 0.00 0.00 46.83 4.18
1793 1893 2.799978 CACAGACACACAAATGCGTCTA 59.200 45.455 0.00 0.00 44.63 2.59
1794 1894 3.433274 CACAGACACACAAATGCGTCTAT 59.567 43.478 0.00 0.00 44.63 1.98
1795 1895 4.625311 CACAGACACACAAATGCGTCTATA 59.375 41.667 0.00 0.00 44.63 1.31
1796 1896 5.291858 CACAGACACACAAATGCGTCTATAT 59.708 40.000 0.00 0.00 44.63 0.86
1797 1897 6.475402 CACAGACACACAAATGCGTCTATATA 59.525 38.462 0.00 0.00 44.63 0.86
1798 1898 6.475727 ACAGACACACAAATGCGTCTATATAC 59.524 38.462 0.00 0.00 44.63 1.47
1799 1899 6.475402 CAGACACACAAATGCGTCTATATACA 59.525 38.462 0.00 0.00 44.63 2.29
1800 1900 7.169813 CAGACACACAAATGCGTCTATATACAT 59.830 37.037 0.00 0.00 44.63 2.29
1801 1901 7.382488 AGACACACAAATGCGTCTATATACATC 59.618 37.037 0.00 0.00 44.60 3.06
1802 1902 7.210174 ACACACAAATGCGTCTATATACATCT 58.790 34.615 0.00 0.00 0.00 2.90
1803 1903 7.169813 ACACACAAATGCGTCTATATACATCTG 59.830 37.037 0.00 0.00 0.00 2.90
1804 1904 7.382218 CACACAAATGCGTCTATATACATCTGA 59.618 37.037 0.00 0.00 0.00 3.27
1805 1905 8.090831 ACACAAATGCGTCTATATACATCTGAT 58.909 33.333 0.00 0.00 0.00 2.90
1806 1906 8.929746 CACAAATGCGTCTATATACATCTGATT 58.070 33.333 0.00 0.00 0.00 2.57
1807 1907 9.144747 ACAAATGCGTCTATATACATCTGATTC 57.855 33.333 0.00 0.00 0.00 2.52
1808 1908 9.143631 CAAATGCGTCTATATACATCTGATTCA 57.856 33.333 0.00 0.00 0.00 2.57
1809 1909 9.881649 AAATGCGTCTATATACATCTGATTCAT 57.118 29.630 0.00 0.00 0.00 2.57
1813 1913 9.457110 GCGTCTATATACATCTGATTCATAAGG 57.543 37.037 0.00 0.00 0.00 2.69
1823 1923 9.606631 ACATCTGATTCATAAGGAAGTTAGAAC 57.393 33.333 0.00 0.00 39.30 3.01
1824 1924 9.605275 CATCTGATTCATAAGGAAGTTAGAACA 57.395 33.333 0.00 0.00 39.30 3.18
1826 1926 9.823647 TCTGATTCATAAGGAAGTTAGAACATC 57.176 33.333 0.00 0.00 39.30 3.06
1827 1927 9.829507 CTGATTCATAAGGAAGTTAGAACATCT 57.170 33.333 0.00 0.00 39.30 2.90
1837 1937 9.765795 AGGAAGTTAGAACATCTTATATTTCGG 57.234 33.333 0.00 0.00 0.00 4.30
1838 1938 9.760077 GGAAGTTAGAACATCTTATATTTCGGA 57.240 33.333 0.00 0.00 0.00 4.55
1841 1941 9.627395 AGTTAGAACATCTTATATTTCGGATCG 57.373 33.333 0.00 0.00 0.00 3.69
1842 1942 8.861101 GTTAGAACATCTTATATTTCGGATCGG 58.139 37.037 0.00 0.00 0.00 4.18
1844 1944 7.841956 AGAACATCTTATATTTCGGATCGGAT 58.158 34.615 3.55 0.00 0.00 4.18
1847 1947 6.154534 ACATCTTATATTTCGGATCGGATGGA 59.845 38.462 3.55 0.00 34.29 3.41
1850 1950 6.888088 TCTTATATTTCGGATCGGATGGAGTA 59.112 38.462 3.55 0.00 0.00 2.59
1851 1951 3.944055 ATTTCGGATCGGATGGAGTAG 57.056 47.619 3.55 0.00 0.00 2.57
1860 1960 3.921677 TCGGATGGAGTAGAACAAACAC 58.078 45.455 0.00 0.00 0.00 3.32
1865 1965 5.298276 GGATGGAGTAGAACAAACACACAAA 59.702 40.000 0.00 0.00 0.00 2.83
1866 1966 6.016276 GGATGGAGTAGAACAAACACACAAAT 60.016 38.462 0.00 0.00 0.00 2.32
1867 1967 6.767524 TGGAGTAGAACAAACACACAAATT 57.232 33.333 0.00 0.00 0.00 1.82
1868 1968 7.164230 TGGAGTAGAACAAACACACAAATTT 57.836 32.000 0.00 0.00 0.00 1.82
1869 1969 7.032580 TGGAGTAGAACAAACACACAAATTTG 58.967 34.615 16.67 16.67 40.83 2.32
1871 1971 7.220108 GGAGTAGAACAAACACACAAATTTGTC 59.780 37.037 20.85 6.79 45.86 3.18
1873 1973 7.968405 AGTAGAACAAACACACAAATTTGTCTC 59.032 33.333 20.85 7.67 45.86 3.36
1875 1975 6.586082 AGAACAAACACACAAATTTGTCTCAC 59.414 34.615 20.85 6.28 45.86 3.51
1885 2058 4.916041 AATTTGTCTCACTGGAGGATCA 57.084 40.909 0.00 0.00 41.69 2.92
1888 2061 2.113807 TGTCTCACTGGAGGATCATGG 58.886 52.381 0.00 0.00 41.69 3.66
1892 2065 0.763652 CACTGGAGGATCATGGGGAG 59.236 60.000 0.00 0.00 36.25 4.30
1900 2081 1.613836 GATCATGGGGAGGCATCAAC 58.386 55.000 0.00 0.00 0.00 3.18
1923 2104 8.509690 CAACTGAACAAAGAATACATCATCTGT 58.490 33.333 0.00 0.00 42.13 3.41
2024 2213 1.917303 CACAAAACAACACTCGGCAAC 59.083 47.619 0.00 0.00 0.00 4.17
2077 2266 5.278709 CGAATGGAGCATCTCTACTACACAT 60.279 44.000 0.00 0.00 33.73 3.21
2098 2287 0.901827 TTCTATCTGTTCCAGCCGCA 59.098 50.000 0.00 0.00 0.00 5.69
2257 2446 3.609853 TCAGCTGTTTCTTCTGTGTTGT 58.390 40.909 14.67 0.00 0.00 3.32
2262 2451 4.380444 GCTGTTTCTTCTGTGTTGTGGAAA 60.380 41.667 0.00 0.00 0.00 3.13
2266 2455 4.963276 TCTTCTGTGTTGTGGAAACAAG 57.037 40.909 0.00 0.00 46.06 3.16
2267 2456 3.694072 TCTTCTGTGTTGTGGAAACAAGG 59.306 43.478 0.00 0.00 46.06 3.61
2278 2467 3.005791 GTGGAAACAAGGACAAATGGAGG 59.994 47.826 0.00 0.00 46.06 4.30
2280 2469 3.496331 GAAACAAGGACAAATGGAGGGA 58.504 45.455 0.00 0.00 0.00 4.20
2283 2472 3.922375 ACAAGGACAAATGGAGGGAAAA 58.078 40.909 0.00 0.00 0.00 2.29
2284 2473 4.492646 ACAAGGACAAATGGAGGGAAAAT 58.507 39.130 0.00 0.00 0.00 1.82
2285 2474 4.284234 ACAAGGACAAATGGAGGGAAAATG 59.716 41.667 0.00 0.00 0.00 2.32
2286 2475 4.402616 AGGACAAATGGAGGGAAAATGA 57.597 40.909 0.00 0.00 0.00 2.57
2287 2476 4.347607 AGGACAAATGGAGGGAAAATGAG 58.652 43.478 0.00 0.00 0.00 2.90
2288 2477 4.044571 AGGACAAATGGAGGGAAAATGAGA 59.955 41.667 0.00 0.00 0.00 3.27
2289 2478 4.772100 GGACAAATGGAGGGAAAATGAGAA 59.228 41.667 0.00 0.00 0.00 2.87
2290 2479 5.423290 GGACAAATGGAGGGAAAATGAGAAT 59.577 40.000 0.00 0.00 0.00 2.40
2306 2495 9.846248 AAAATGAGAATGATGCTTTAGTACAAC 57.154 29.630 0.00 0.00 0.00 3.32
2358 2550 6.648502 CAAATGCAAATCAACACAAGGTTAC 58.351 36.000 0.00 0.00 37.72 2.50
2424 2616 0.533308 TGACTGGTGCGTGGGTAAAC 60.533 55.000 0.00 0.00 0.00 2.01
2425 2617 0.533308 GACTGGTGCGTGGGTAAACA 60.533 55.000 0.00 0.00 0.00 2.83
2565 2758 2.958355 TCTTTTTGCCTCCTTCACTTGG 59.042 45.455 0.00 0.00 0.00 3.61
2649 2842 8.915057 AAGATGATACATTCGATCCTGAAATT 57.085 30.769 0.00 0.00 0.00 1.82
2673 2866 1.525619 GGACGGCGTCATTAATACTGC 59.474 52.381 37.13 15.11 33.68 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.125512 CTGTCGTAGGGCAGTGGC 60.126 66.667 8.47 8.47 40.13 5.01
90 91 2.046864 CGAAGGCTCCCTCTCGTCA 61.047 63.158 0.00 0.00 33.19 4.35
159 160 1.243342 CCACGGCAGCTTTGAATGGA 61.243 55.000 0.00 0.00 0.00 3.41
258 262 2.590821 GGGGCGTAACATAGAGTAGGA 58.409 52.381 0.00 0.00 0.00 2.94
320 324 5.186797 ACAACTGGTGAGTGAAATGGAAAAA 59.813 36.000 0.00 0.00 30.61 1.94
347 351 5.067805 GGCAGTCCAAATTTATACTCCCAAG 59.932 44.000 7.04 0.00 0.00 3.61
349 353 4.229582 AGGCAGTCCAAATTTATACTCCCA 59.770 41.667 12.36 0.00 33.74 4.37
350 354 4.793201 AGGCAGTCCAAATTTATACTCCC 58.207 43.478 4.55 4.55 33.74 4.30
351 355 5.685728 AGAGGCAGTCCAAATTTATACTCC 58.314 41.667 0.00 2.37 33.74 3.85
352 356 6.706716 GGTAGAGGCAGTCCAAATTTATACTC 59.293 42.308 0.00 0.00 33.74 2.59
353 357 6.409349 GGGTAGAGGCAGTCCAAATTTATACT 60.409 42.308 0.00 0.00 33.74 2.12
356 360 4.478686 AGGGTAGAGGCAGTCCAAATTTAT 59.521 41.667 0.00 0.00 33.74 1.40
357 361 3.850173 AGGGTAGAGGCAGTCCAAATTTA 59.150 43.478 0.00 0.00 33.74 1.40
537 554 3.953775 CCTGCACCCTGGAACCGT 61.954 66.667 0.00 0.00 32.15 4.83
548 565 1.021390 ACAGCTACATTCGCCTGCAC 61.021 55.000 0.00 0.00 0.00 4.57
556 573 7.645340 CCTTAATTTGCACATACAGCTACATTC 59.355 37.037 0.00 0.00 0.00 2.67
627 645 3.307480 GGAAGAGAACGGGAGATCCAAAA 60.307 47.826 0.47 0.00 37.91 2.44
634 652 1.203137 TCCAAGGAAGAGAACGGGAGA 60.203 52.381 0.00 0.00 0.00 3.71
636 654 1.831736 GATCCAAGGAAGAGAACGGGA 59.168 52.381 0.00 0.00 0.00 5.14
637 655 1.555075 TGATCCAAGGAAGAGAACGGG 59.445 52.381 0.00 0.00 0.00 5.28
638 656 3.550437 ATGATCCAAGGAAGAGAACGG 57.450 47.619 0.00 0.00 0.00 4.44
639 657 4.509600 GCTAATGATCCAAGGAAGAGAACG 59.490 45.833 0.00 0.00 0.00 3.95
640 658 5.679601 AGCTAATGATCCAAGGAAGAGAAC 58.320 41.667 0.00 0.00 0.00 3.01
641 659 5.965033 AGCTAATGATCCAAGGAAGAGAA 57.035 39.130 0.00 0.00 0.00 2.87
642 660 5.678583 CAAGCTAATGATCCAAGGAAGAGA 58.321 41.667 0.00 0.00 0.00 3.10
643 661 4.275443 GCAAGCTAATGATCCAAGGAAGAG 59.725 45.833 0.00 0.00 0.00 2.85
644 662 4.202441 GCAAGCTAATGATCCAAGGAAGA 58.798 43.478 0.00 0.00 0.00 2.87
645 663 3.949754 TGCAAGCTAATGATCCAAGGAAG 59.050 43.478 0.00 0.00 0.00 3.46
646 664 3.966979 TGCAAGCTAATGATCCAAGGAA 58.033 40.909 0.00 0.00 0.00 3.36
647 665 3.650281 TGCAAGCTAATGATCCAAGGA 57.350 42.857 0.00 0.00 0.00 3.36
648 666 3.635373 ACATGCAAGCTAATGATCCAAGG 59.365 43.478 10.11 0.00 0.00 3.61
649 667 4.913335 ACATGCAAGCTAATGATCCAAG 57.087 40.909 10.11 0.00 0.00 3.61
650 668 5.664294 AAACATGCAAGCTAATGATCCAA 57.336 34.783 10.11 0.00 0.00 3.53
651 669 5.412640 CAAAACATGCAAGCTAATGATCCA 58.587 37.500 10.11 0.00 0.00 3.41
652 670 5.961395 CAAAACATGCAAGCTAATGATCC 57.039 39.130 10.11 0.00 0.00 3.36
666 684 0.249405 AAGCACCACGGCAAAACATG 60.249 50.000 0.00 0.00 35.83 3.21
667 685 0.249405 CAAGCACCACGGCAAAACAT 60.249 50.000 0.00 0.00 35.83 2.71
668 686 1.140589 CAAGCACCACGGCAAAACA 59.859 52.632 0.00 0.00 35.83 2.83
669 687 0.459411 AACAAGCACCACGGCAAAAC 60.459 50.000 0.00 0.00 35.83 2.43
670 688 0.247736 AAACAAGCACCACGGCAAAA 59.752 45.000 0.00 0.00 35.83 2.44
671 689 0.459237 CAAACAAGCACCACGGCAAA 60.459 50.000 0.00 0.00 35.83 3.68
674 692 2.027460 CCAAACAAGCACCACGGC 59.973 61.111 0.00 0.00 0.00 5.68
676 694 1.299316 CAGCCAAACAAGCACCACG 60.299 57.895 0.00 0.00 0.00 4.94
677 695 0.675633 ATCAGCCAAACAAGCACCAC 59.324 50.000 0.00 0.00 0.00 4.16
679 697 1.606224 CCAATCAGCCAAACAAGCACC 60.606 52.381 0.00 0.00 0.00 5.01
682 700 2.531522 AACCAATCAGCCAAACAAGC 57.468 45.000 0.00 0.00 0.00 4.01
683 701 4.440880 TGAAAACCAATCAGCCAAACAAG 58.559 39.130 0.00 0.00 0.00 3.16
686 704 4.213906 CCAATGAAAACCAATCAGCCAAAC 59.786 41.667 0.00 0.00 0.00 2.93
690 708 3.683365 ACCAATGAAAACCAATCAGCC 57.317 42.857 0.00 0.00 0.00 4.85
691 709 4.165779 CGTACCAATGAAAACCAATCAGC 58.834 43.478 0.00 0.00 0.00 4.26
692 710 5.371115 ACGTACCAATGAAAACCAATCAG 57.629 39.130 0.00 0.00 0.00 2.90
696 714 4.756135 GGAGTACGTACCAATGAAAACCAA 59.244 41.667 21.80 0.00 0.00 3.67
703 721 4.240881 AGTAGGGAGTACGTACCAATGA 57.759 45.455 21.80 2.74 40.44 2.57
704 722 4.159135 ACAAGTAGGGAGTACGTACCAATG 59.841 45.833 21.80 11.80 40.44 2.82
705 723 4.347607 ACAAGTAGGGAGTACGTACCAAT 58.652 43.478 21.80 3.70 40.44 3.16
706 724 3.758554 GACAAGTAGGGAGTACGTACCAA 59.241 47.826 21.80 0.81 40.44 3.67
707 725 3.009473 AGACAAGTAGGGAGTACGTACCA 59.991 47.826 21.80 0.09 40.44 3.25
709 727 3.308323 CGAGACAAGTAGGGAGTACGTAC 59.692 52.174 18.10 18.10 39.99 3.67
711 729 2.354259 CGAGACAAGTAGGGAGTACGT 58.646 52.381 0.00 0.00 36.66 3.57
713 731 2.996631 TCCGAGACAAGTAGGGAGTAC 58.003 52.381 0.00 0.00 0.00 2.73
714 732 3.947612 ATCCGAGACAAGTAGGGAGTA 57.052 47.619 0.00 0.00 0.00 2.59
715 733 2.830651 ATCCGAGACAAGTAGGGAGT 57.169 50.000 0.00 0.00 0.00 3.85
716 734 3.508012 CCATATCCGAGACAAGTAGGGAG 59.492 52.174 0.00 0.00 0.00 4.30
719 737 4.524714 ACATCCATATCCGAGACAAGTAGG 59.475 45.833 0.00 0.00 0.00 3.18
720 738 5.713792 ACATCCATATCCGAGACAAGTAG 57.286 43.478 0.00 0.00 0.00 2.57
722 740 6.013379 AGATACATCCATATCCGAGACAAGT 58.987 40.000 0.00 0.00 32.76 3.16
725 743 6.958767 TCTAGATACATCCATATCCGAGACA 58.041 40.000 0.00 0.00 32.76 3.41
726 744 7.554835 AGTTCTAGATACATCCATATCCGAGAC 59.445 40.741 0.00 0.00 32.76 3.36
727 745 7.634718 AGTTCTAGATACATCCATATCCGAGA 58.365 38.462 0.00 0.00 32.76 4.04
728 746 7.873719 AGTTCTAGATACATCCATATCCGAG 57.126 40.000 0.00 0.00 32.76 4.63
729 747 9.749340 TTTAGTTCTAGATACATCCATATCCGA 57.251 33.333 0.00 0.00 32.76 4.55
747 765 9.717942 GGATGCATCTAGATGTATTTTAGTTCT 57.282 33.333 29.66 11.50 42.77 3.01
748 766 9.494271 TGGATGCATCTAGATGTATTTTAGTTC 57.506 33.333 29.66 18.97 42.77 3.01
753 771 9.584008 AGAAATGGATGCATCTAGATGTATTTT 57.416 29.630 29.66 25.38 42.77 1.82
755 773 7.120873 GCAGAAATGGATGCATCTAGATGTATT 59.879 37.037 29.66 18.35 42.77 1.89
757 775 5.936372 GCAGAAATGGATGCATCTAGATGTA 59.064 40.000 28.92 26.27 42.11 2.29
758 776 4.760715 GCAGAAATGGATGCATCTAGATGT 59.239 41.667 28.92 14.10 42.11 3.06
759 777 4.142881 CGCAGAAATGGATGCATCTAGATG 60.143 45.833 25.64 25.64 42.68 2.90
760 778 4.001652 CGCAGAAATGGATGCATCTAGAT 58.998 43.478 25.28 12.78 42.68 1.98
762 780 3.186001 GTCGCAGAAATGGATGCATCTAG 59.814 47.826 25.28 9.06 42.68 2.43
763 781 3.133691 GTCGCAGAAATGGATGCATCTA 58.866 45.455 25.28 20.79 42.68 1.98
765 783 1.672363 TGTCGCAGAAATGGATGCATC 59.328 47.619 18.81 18.81 42.68 3.91
768 786 1.470098 ACTTGTCGCAGAAATGGATGC 59.530 47.619 0.00 0.00 39.69 3.91
769 787 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
770 788 6.515272 AAATTACTTGTCGCAGAAATGGAT 57.485 33.333 0.00 0.00 39.69 3.41
771 789 5.390461 CGAAATTACTTGTCGCAGAAATGGA 60.390 40.000 0.00 0.00 39.69 3.41
772 790 4.788100 CGAAATTACTTGTCGCAGAAATGG 59.212 41.667 0.00 0.00 39.69 3.16
773 791 5.617609 TCGAAATTACTTGTCGCAGAAATG 58.382 37.500 0.00 0.00 39.69 2.32
774 792 5.856126 TCGAAATTACTTGTCGCAGAAAT 57.144 34.783 0.00 0.00 39.69 2.17
775 793 5.660629 TTCGAAATTACTTGTCGCAGAAA 57.339 34.783 0.00 0.00 39.69 2.52
776 794 4.377022 GCTTCGAAATTACTTGTCGCAGAA 60.377 41.667 0.00 0.00 39.69 3.02
777 795 3.122948 GCTTCGAAATTACTTGTCGCAGA 59.877 43.478 0.00 0.00 30.99 4.26
778 796 3.120683 TGCTTCGAAATTACTTGTCGCAG 60.121 43.478 0.00 0.00 34.80 5.18
779 797 2.803386 TGCTTCGAAATTACTTGTCGCA 59.197 40.909 0.00 0.00 34.80 5.10
780 798 3.449322 TGCTTCGAAATTACTTGTCGC 57.551 42.857 0.00 0.00 34.80 5.19
781 799 6.247165 CAGAAATGCTTCGAAATTACTTGTCG 59.753 38.462 0.00 0.00 36.61 4.35
782 800 6.032880 GCAGAAATGCTTCGAAATTACTTGTC 59.967 38.462 0.00 0.00 36.61 3.18
783 801 5.858581 GCAGAAATGCTTCGAAATTACTTGT 59.141 36.000 0.00 0.00 36.61 3.16
787 805 4.492294 GTCGCAGAAATGCTTCGAAATTAC 59.508 41.667 0.00 0.00 43.55 1.89
795 813 2.977405 ACTTGTCGCAGAAATGCTTC 57.023 45.000 0.00 0.00 39.69 3.86
796 814 5.376854 AATTACTTGTCGCAGAAATGCTT 57.623 34.783 0.00 0.00 39.69 3.91
797 815 5.376854 AAATTACTTGTCGCAGAAATGCT 57.623 34.783 0.00 0.00 39.69 3.79
798 816 4.260656 CGAAATTACTTGTCGCAGAAATGC 59.739 41.667 0.00 0.00 39.69 3.56
799 817 5.617609 TCGAAATTACTTGTCGCAGAAATG 58.382 37.500 0.00 0.00 39.69 2.32
800 818 5.856126 TCGAAATTACTTGTCGCAGAAAT 57.144 34.783 0.00 0.00 39.69 2.17
801 819 5.437263 GTTCGAAATTACTTGTCGCAGAAA 58.563 37.500 0.00 0.00 39.69 2.52
802 820 4.375606 CGTTCGAAATTACTTGTCGCAGAA 60.376 41.667 0.00 0.00 39.69 3.02
803 821 3.120616 CGTTCGAAATTACTTGTCGCAGA 59.879 43.478 0.00 0.00 34.80 4.26
804 822 3.395671 CGTTCGAAATTACTTGTCGCAG 58.604 45.455 0.00 0.00 34.80 5.18
805 823 2.156117 CCGTTCGAAATTACTTGTCGCA 59.844 45.455 0.00 0.00 34.80 5.10
806 824 2.409378 TCCGTTCGAAATTACTTGTCGC 59.591 45.455 0.00 0.00 34.80 5.19
807 825 3.060363 CCTCCGTTCGAAATTACTTGTCG 59.940 47.826 0.00 0.00 36.12 4.35
808 826 3.370061 CCCTCCGTTCGAAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
809 827 3.007182 TCCCTCCGTTCGAAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
810 828 3.592059 TCCCTCCGTTCGAAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
811 829 3.260128 ACTCCCTCCGTTCGAAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
812 830 2.830321 ACTCCCTCCGTTCGAAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
813 831 3.242549 ACTCCCTCCGTTCGAAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
814 832 3.181483 GCTACTCCCTCCGTTCGAAATTA 60.181 47.826 0.00 0.00 0.00 1.40
815 833 2.418334 GCTACTCCCTCCGTTCGAAATT 60.418 50.000 0.00 0.00 0.00 1.82
816 834 1.136500 GCTACTCCCTCCGTTCGAAAT 59.864 52.381 0.00 0.00 0.00 2.17
817 835 0.529378 GCTACTCCCTCCGTTCGAAA 59.471 55.000 0.00 0.00 0.00 3.46
818 836 0.609957 TGCTACTCCCTCCGTTCGAA 60.610 55.000 0.00 0.00 0.00 3.71
819 837 1.001764 TGCTACTCCCTCCGTTCGA 60.002 57.895 0.00 0.00 0.00 3.71
820 838 1.433879 CTGCTACTCCCTCCGTTCG 59.566 63.158 0.00 0.00 0.00 3.95
821 839 1.142097 GCTGCTACTCCCTCCGTTC 59.858 63.158 0.00 0.00 0.00 3.95
822 840 0.033405 TAGCTGCTACTCCCTCCGTT 60.033 55.000 5.02 0.00 0.00 4.44
823 841 0.033405 TTAGCTGCTACTCCCTCCGT 60.033 55.000 9.27 0.00 0.00 4.69
824 842 0.386113 GTTAGCTGCTACTCCCTCCG 59.614 60.000 9.27 0.00 0.00 4.63
825 843 1.486211 TGTTAGCTGCTACTCCCTCC 58.514 55.000 9.27 0.00 0.00 4.30
826 844 3.611766 TTTGTTAGCTGCTACTCCCTC 57.388 47.619 9.27 0.00 0.00 4.30
827 845 4.367039 TTTTTGTTAGCTGCTACTCCCT 57.633 40.909 9.27 0.00 0.00 4.20
828 846 5.416013 AGAATTTTTGTTAGCTGCTACTCCC 59.584 40.000 9.27 0.00 0.00 4.30
829 847 6.149474 TCAGAATTTTTGTTAGCTGCTACTCC 59.851 38.462 9.27 1.23 0.00 3.85
830 848 7.133891 TCAGAATTTTTGTTAGCTGCTACTC 57.866 36.000 9.27 6.50 0.00 2.59
831 849 7.609532 AGATCAGAATTTTTGTTAGCTGCTACT 59.390 33.333 9.27 0.00 0.00 2.57
832 850 7.695618 CAGATCAGAATTTTTGTTAGCTGCTAC 59.304 37.037 9.27 5.67 0.00 3.58
833 851 7.627088 GCAGATCAGAATTTTTGTTAGCTGCTA 60.627 37.037 5.02 5.02 40.29 3.49
834 852 6.618811 CAGATCAGAATTTTTGTTAGCTGCT 58.381 36.000 7.57 7.57 0.00 4.24
835 853 5.287992 GCAGATCAGAATTTTTGTTAGCTGC 59.712 40.000 0.00 0.00 37.34 5.25
836 854 5.510674 CGCAGATCAGAATTTTTGTTAGCTG 59.489 40.000 0.00 0.00 0.00 4.24
837 855 5.182001 ACGCAGATCAGAATTTTTGTTAGCT 59.818 36.000 0.00 0.00 0.00 3.32
838 856 5.393962 ACGCAGATCAGAATTTTTGTTAGC 58.606 37.500 0.00 0.00 0.00 3.09
839 857 9.003112 CATTACGCAGATCAGAATTTTTGTTAG 57.997 33.333 0.00 0.00 0.00 2.34
840 858 8.726068 TCATTACGCAGATCAGAATTTTTGTTA 58.274 29.630 0.00 0.00 0.00 2.41
841 859 7.592938 TCATTACGCAGATCAGAATTTTTGTT 58.407 30.769 0.00 0.00 0.00 2.83
842 860 7.144722 TCATTACGCAGATCAGAATTTTTGT 57.855 32.000 0.00 0.00 0.00 2.83
843 861 7.911727 TCATCATTACGCAGATCAGAATTTTTG 59.088 33.333 0.00 0.00 0.00 2.44
844 862 7.988737 TCATCATTACGCAGATCAGAATTTTT 58.011 30.769 0.00 0.00 0.00 1.94
845 863 7.558161 TCATCATTACGCAGATCAGAATTTT 57.442 32.000 0.00 0.00 0.00 1.82
846 864 7.741027 ATCATCATTACGCAGATCAGAATTT 57.259 32.000 0.00 0.00 0.00 1.82
847 865 7.874528 TGTATCATCATTACGCAGATCAGAATT 59.125 33.333 0.00 0.00 0.00 2.17
848 866 7.381323 TGTATCATCATTACGCAGATCAGAAT 58.619 34.615 0.00 0.00 0.00 2.40
849 867 6.748132 TGTATCATCATTACGCAGATCAGAA 58.252 36.000 0.00 0.00 0.00 3.02
850 868 6.331369 TGTATCATCATTACGCAGATCAGA 57.669 37.500 0.00 0.00 0.00 3.27
851 869 7.034397 AGATGTATCATCATTACGCAGATCAG 58.966 38.462 11.47 0.00 0.00 2.90
852 870 6.928520 AGATGTATCATCATTACGCAGATCA 58.071 36.000 11.47 0.00 0.00 2.92
853 871 6.196168 CGAGATGTATCATCATTACGCAGATC 59.804 42.308 11.47 0.00 0.00 2.75
854 872 6.032717 CGAGATGTATCATCATTACGCAGAT 58.967 40.000 11.47 0.00 0.00 2.90
855 873 5.048713 ACGAGATGTATCATCATTACGCAGA 60.049 40.000 11.47 0.00 33.71 4.26
856 874 5.157067 ACGAGATGTATCATCATTACGCAG 58.843 41.667 11.47 0.00 33.71 5.18
857 875 5.121221 ACGAGATGTATCATCATTACGCA 57.879 39.130 11.47 0.00 33.71 5.24
858 876 4.559251 GGACGAGATGTATCATCATTACGC 59.441 45.833 11.47 7.77 33.71 4.42
859 877 5.699839 TGGACGAGATGTATCATCATTACG 58.300 41.667 11.47 12.06 35.12 3.18
860 878 6.533012 CCATGGACGAGATGTATCATCATTAC 59.467 42.308 5.56 2.10 0.00 1.89
861 879 6.633856 CCATGGACGAGATGTATCATCATTA 58.366 40.000 5.56 0.00 0.00 1.90
862 880 5.485620 CCATGGACGAGATGTATCATCATT 58.514 41.667 5.56 0.00 0.00 2.57
863 881 4.622457 GCCATGGACGAGATGTATCATCAT 60.622 45.833 18.40 0.00 0.00 2.45
864 882 3.306294 GCCATGGACGAGATGTATCATCA 60.306 47.826 18.40 0.00 0.00 3.07
865 883 3.257393 GCCATGGACGAGATGTATCATC 58.743 50.000 18.40 1.98 0.00 2.92
866 884 2.634453 TGCCATGGACGAGATGTATCAT 59.366 45.455 18.40 0.00 0.00 2.45
867 885 2.036346 CTGCCATGGACGAGATGTATCA 59.964 50.000 18.40 0.00 0.00 2.15
868 886 2.681706 CTGCCATGGACGAGATGTATC 58.318 52.381 18.40 0.00 0.00 2.24
869 887 1.270518 GCTGCCATGGACGAGATGTAT 60.271 52.381 18.40 0.00 0.00 2.29
870 888 0.104855 GCTGCCATGGACGAGATGTA 59.895 55.000 18.40 0.00 0.00 2.29
871 889 1.153289 GCTGCCATGGACGAGATGT 60.153 57.895 18.40 0.00 0.00 3.06
872 890 1.153309 TGCTGCCATGGACGAGATG 60.153 57.895 18.40 0.00 0.00 2.90
873 891 1.145598 CTGCTGCCATGGACGAGAT 59.854 57.895 18.40 0.00 0.00 2.75
874 892 1.543944 TTCTGCTGCCATGGACGAGA 61.544 55.000 18.40 7.51 0.00 4.04
875 893 0.674581 TTTCTGCTGCCATGGACGAG 60.675 55.000 18.40 8.74 0.00 4.18
876 894 0.674581 CTTTCTGCTGCCATGGACGA 60.675 55.000 18.40 0.04 0.00 4.20
877 895 1.798735 CTTTCTGCTGCCATGGACG 59.201 57.895 18.40 6.09 0.00 4.79
878 896 1.509923 GCTTTCTGCTGCCATGGAC 59.490 57.895 18.40 7.64 38.95 4.02
879 897 4.007457 GCTTTCTGCTGCCATGGA 57.993 55.556 18.40 0.00 38.95 3.41
885 903 1.174712 TCACCTTGGCTTTCTGCTGC 61.175 55.000 0.00 0.00 42.39 5.25
886 904 1.268899 CTTCACCTTGGCTTTCTGCTG 59.731 52.381 0.00 0.00 42.39 4.41
887 905 1.613836 CTTCACCTTGGCTTTCTGCT 58.386 50.000 0.00 0.00 42.39 4.24
888 906 0.038801 GCTTCACCTTGGCTTTCTGC 60.039 55.000 0.00 0.00 41.94 4.26
889 907 1.538950 GAGCTTCACCTTGGCTTTCTG 59.461 52.381 0.00 0.00 36.37 3.02
890 908 1.546548 GGAGCTTCACCTTGGCTTTCT 60.547 52.381 0.00 0.00 36.37 2.52
891 909 0.884514 GGAGCTTCACCTTGGCTTTC 59.115 55.000 0.00 0.00 36.37 2.62
892 910 0.480252 AGGAGCTTCACCTTGGCTTT 59.520 50.000 0.00 0.00 36.37 3.51
893 911 0.480252 AAGGAGCTTCACCTTGGCTT 59.520 50.000 4.44 0.00 44.73 4.35
894 912 2.158780 AAGGAGCTTCACCTTGGCT 58.841 52.632 4.44 0.00 44.73 4.75
899 917 1.352083 TAGCACAAGGAGCTTCACCT 58.648 50.000 0.00 0.00 43.25 4.00
902 920 6.763135 CAGTATTATTAGCACAAGGAGCTTCA 59.237 38.462 0.00 0.00 43.25 3.02
905 923 5.059833 GCAGTATTATTAGCACAAGGAGCT 58.940 41.667 0.00 0.00 45.77 4.09
906 924 4.084328 CGCAGTATTATTAGCACAAGGAGC 60.084 45.833 0.00 0.00 0.00 4.70
909 927 5.556382 CGTTCGCAGTATTATTAGCACAAGG 60.556 44.000 0.00 0.00 0.00 3.61
910 928 5.231357 TCGTTCGCAGTATTATTAGCACAAG 59.769 40.000 0.00 0.00 0.00 3.16
911 929 5.103687 TCGTTCGCAGTATTATTAGCACAA 58.896 37.500 0.00 0.00 0.00 3.33
918 936 3.799963 TCGCATTCGTTCGCAGTATTATT 59.200 39.130 0.00 0.00 36.96 1.40
919 937 3.181774 GTCGCATTCGTTCGCAGTATTAT 59.818 43.478 0.00 0.00 36.96 1.28
922 940 0.921347 GTCGCATTCGTTCGCAGTAT 59.079 50.000 0.00 0.00 36.96 2.12
923 941 1.074319 GGTCGCATTCGTTCGCAGTA 61.074 55.000 0.00 0.00 36.96 2.74
924 942 2.380410 GGTCGCATTCGTTCGCAGT 61.380 57.895 0.00 0.00 36.96 4.40
925 943 1.896339 TTGGTCGCATTCGTTCGCAG 61.896 55.000 0.00 0.00 36.96 5.18
931 949 2.456010 GTTTTGTTTGGTCGCATTCGT 58.544 42.857 0.00 0.00 36.96 3.85
932 950 1.784283 GGTTTTGTTTGGTCGCATTCG 59.216 47.619 0.00 0.00 0.00 3.34
933 951 1.784283 CGGTTTTGTTTGGTCGCATTC 59.216 47.619 0.00 0.00 0.00 2.67
934 952 1.846541 CGGTTTTGTTTGGTCGCATT 58.153 45.000 0.00 0.00 0.00 3.56
935 953 0.596341 GCGGTTTTGTTTGGTCGCAT 60.596 50.000 0.00 0.00 42.27 4.73
936 954 1.226717 GCGGTTTTGTTTGGTCGCA 60.227 52.632 0.00 0.00 42.27 5.10
937 955 2.290082 CGCGGTTTTGTTTGGTCGC 61.290 57.895 0.00 0.00 39.79 5.19
939 957 1.947146 GGCGCGGTTTTGTTTGGTC 60.947 57.895 8.83 0.00 0.00 4.02
941 959 0.030908 TAAGGCGCGGTTTTGTTTGG 59.969 50.000 8.83 0.00 0.00 3.28
946 964 0.377203 GAGGATAAGGCGCGGTTTTG 59.623 55.000 8.83 0.00 0.00 2.44
947 965 0.746923 GGAGGATAAGGCGCGGTTTT 60.747 55.000 8.83 0.00 0.00 2.43
991 1021 2.543802 CGCTGCTCATGATGCTGGG 61.544 63.158 18.39 18.39 36.43 4.45
998 1028 4.584688 CAGTGACGCTGCTCATGA 57.415 55.556 2.48 0.00 38.52 3.07
1018 1060 4.148825 GGACTGCGAGATGCCGGT 62.149 66.667 1.90 0.00 45.60 5.28
1019 1061 4.147449 TGGACTGCGAGATGCCGG 62.147 66.667 0.00 0.00 45.60 6.13
1021 1063 2.512515 GGTGGACTGCGAGATGCC 60.513 66.667 0.00 0.00 45.60 4.40
1024 1066 4.148825 GCCGGTGGACTGCGAGAT 62.149 66.667 1.90 0.00 0.00 2.75
1080 1122 4.171103 AATAGGGACCGCGGCACC 62.171 66.667 28.58 27.28 0.00 5.01
1086 1128 4.963428 CGCCGGAATAGGGACCGC 62.963 72.222 5.05 0.00 46.59 5.68
1090 1132 3.546543 CTGCCGCCGGAATAGGGA 61.547 66.667 7.68 2.23 0.00 4.20
1284 1341 1.170290 TGAAGACGAGCACGGACTCA 61.170 55.000 8.74 4.20 44.46 3.41
1313 1370 4.188247 TGACAAGTATTTCCAGACGGAG 57.812 45.455 0.00 0.00 44.10 4.63
1315 1372 6.978343 TTAATGACAAGTATTTCCAGACGG 57.022 37.500 0.00 0.00 0.00 4.79
1316 1373 7.957484 CAGTTTAATGACAAGTATTTCCAGACG 59.043 37.037 0.00 0.00 0.00 4.18
1318 1375 8.160765 TCCAGTTTAATGACAAGTATTTCCAGA 58.839 33.333 0.00 0.00 0.00 3.86
1319 1376 8.335532 TCCAGTTTAATGACAAGTATTTCCAG 57.664 34.615 0.00 0.00 0.00 3.86
1395 1452 9.826574 CCAGAAATATTTGTCATCAAAATGGAT 57.173 29.630 5.17 0.00 44.97 3.41
1396 1453 9.033711 TCCAGAAATATTTGTCATCAAAATGGA 57.966 29.630 5.17 0.00 44.97 3.41
1397 1454 9.090692 GTCCAGAAATATTTGTCATCAAAATGG 57.909 33.333 5.17 0.00 44.97 3.16
1398 1455 8.800972 CGTCCAGAAATATTTGTCATCAAAATG 58.199 33.333 5.17 0.00 44.97 2.32
1399 1456 7.975616 CCGTCCAGAAATATTTGTCATCAAAAT 59.024 33.333 5.17 0.00 44.97 1.82
1400 1457 7.175816 TCCGTCCAGAAATATTTGTCATCAAAA 59.824 33.333 5.17 0.00 44.97 2.44
1401 1458 6.657117 TCCGTCCAGAAATATTTGTCATCAAA 59.343 34.615 5.17 0.00 45.71 2.69
1402 1459 6.176896 TCCGTCCAGAAATATTTGTCATCAA 58.823 36.000 5.17 0.00 0.00 2.57
1403 1460 5.739959 TCCGTCCAGAAATATTTGTCATCA 58.260 37.500 5.17 0.00 0.00 3.07
1404 1461 5.237344 CCTCCGTCCAGAAATATTTGTCATC 59.763 44.000 5.17 0.00 0.00 2.92
1405 1462 5.126067 CCTCCGTCCAGAAATATTTGTCAT 58.874 41.667 5.17 0.00 0.00 3.06
1406 1463 4.513442 CCTCCGTCCAGAAATATTTGTCA 58.487 43.478 5.17 0.00 0.00 3.58
1407 1464 3.877508 CCCTCCGTCCAGAAATATTTGTC 59.122 47.826 5.17 0.00 0.00 3.18
1408 1465 3.521937 TCCCTCCGTCCAGAAATATTTGT 59.478 43.478 5.17 0.00 0.00 2.83
1409 1466 4.130118 CTCCCTCCGTCCAGAAATATTTG 58.870 47.826 5.17 0.00 0.00 2.32
1410 1467 3.780850 ACTCCCTCCGTCCAGAAATATTT 59.219 43.478 0.00 0.00 0.00 1.40
1411 1468 3.385115 ACTCCCTCCGTCCAGAAATATT 58.615 45.455 0.00 0.00 0.00 1.28
1412 1469 3.047695 ACTCCCTCCGTCCAGAAATAT 57.952 47.619 0.00 0.00 0.00 1.28
1413 1470 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
1414 1471 2.108970 GTACTCCCTCCGTCCAGAAAT 58.891 52.381 0.00 0.00 0.00 2.17
1415 1472 1.076677 AGTACTCCCTCCGTCCAGAAA 59.923 52.381 0.00 0.00 0.00 2.52
1416 1473 0.702902 AGTACTCCCTCCGTCCAGAA 59.297 55.000 0.00 0.00 0.00 3.02
1417 1474 0.255318 GAGTACTCCCTCCGTCCAGA 59.745 60.000 12.13 0.00 0.00 3.86
1418 1475 0.752376 GGAGTACTCCCTCCGTCCAG 60.752 65.000 28.87 0.00 43.94 3.86
1419 1476 1.305623 GGAGTACTCCCTCCGTCCA 59.694 63.158 28.87 0.00 43.94 4.02
1420 1477 4.256462 GGAGTACTCCCTCCGTCC 57.744 66.667 28.87 4.17 43.94 4.79
1424 1481 1.881498 CGGTATCGGAGTACTCCCTCC 60.881 61.905 31.78 25.06 46.96 4.30
1425 1482 1.071385 TCGGTATCGGAGTACTCCCTC 59.929 57.143 31.78 19.74 46.96 4.30
1426 1483 1.135094 TCGGTATCGGAGTACTCCCT 58.865 55.000 31.78 22.56 46.96 4.20
1427 1484 2.083002 GATCGGTATCGGAGTACTCCC 58.917 57.143 31.78 19.39 46.96 4.30
1448 1505 3.031964 GCATCAGTGTGCGCTGGTC 62.032 63.158 9.73 0.00 37.12 4.02
1461 1518 0.950555 AGAAGAAGCAACGCGCATCA 60.951 50.000 5.73 0.00 46.13 3.07
1467 1524 2.404215 TCAGTGTAGAAGAAGCAACGC 58.596 47.619 0.00 0.00 0.00 4.84
1485 1542 2.251963 CAACAGCAACGCGCATCA 59.748 55.556 5.73 0.00 46.13 3.07
1486 1543 2.076628 CACAACAGCAACGCGCATC 61.077 57.895 5.73 0.00 46.13 3.91
1488 1545 4.903355 GCACAACAGCAACGCGCA 62.903 61.111 5.73 0.00 46.13 6.09
1491 1548 3.018428 CACGCACAACAGCAACGC 61.018 61.111 0.00 0.00 0.00 4.84
1492 1549 2.352229 CCACGCACAACAGCAACG 60.352 61.111 0.00 0.00 0.00 4.10
1493 1550 1.586042 CACCACGCACAACAGCAAC 60.586 57.895 0.00 0.00 0.00 4.17
1497 1554 3.185082 CTGCCACCACGCACAACAG 62.185 63.158 0.00 0.00 34.35 3.16
1654 1727 4.460382 GCTCTTGAATTCTTCCCATGACAA 59.540 41.667 7.05 0.00 0.00 3.18
1657 1730 3.624777 GGCTCTTGAATTCTTCCCATGA 58.375 45.455 7.05 0.00 0.00 3.07
1680 1753 5.590259 GTGATACATGTTTGGCTATTGGAGT 59.410 40.000 2.30 0.00 0.00 3.85
1691 1764 6.969366 TCAAAACAGAGGTGATACATGTTTG 58.031 36.000 2.30 0.00 41.77 2.93
1701 1801 5.296780 GTCTTGTGATTCAAAACAGAGGTGA 59.703 40.000 0.00 0.00 35.48 4.02
1703 1803 4.273480 CGTCTTGTGATTCAAAACAGAGGT 59.727 41.667 0.00 0.00 35.48 3.85
1705 1805 5.409643 ACGTCTTGTGATTCAAAACAGAG 57.590 39.130 0.00 0.00 35.48 3.35
1710 1810 6.390721 TCCAAAAACGTCTTGTGATTCAAAA 58.609 32.000 8.91 0.00 35.48 2.44
1712 1812 5.568685 TCCAAAAACGTCTTGTGATTCAA 57.431 34.783 8.91 0.00 34.61 2.69
1714 1814 7.305474 ACATATCCAAAAACGTCTTGTGATTC 58.695 34.615 14.02 0.00 0.00 2.52
1715 1815 7.040755 TGACATATCCAAAAACGTCTTGTGATT 60.041 33.333 14.02 3.86 0.00 2.57
1716 1816 6.429692 TGACATATCCAAAAACGTCTTGTGAT 59.570 34.615 8.91 11.68 0.00 3.06
1718 1818 5.996219 TGACATATCCAAAAACGTCTTGTG 58.004 37.500 8.91 2.70 0.00 3.33
1721 1821 8.405531 CCATATTGACATATCCAAAAACGTCTT 58.594 33.333 0.00 0.00 0.00 3.01
1723 1823 7.855904 GTCCATATTGACATATCCAAAAACGTC 59.144 37.037 2.13 0.00 35.29 4.34
1724 1824 7.556275 AGTCCATATTGACATATCCAAAAACGT 59.444 33.333 9.43 0.00 37.73 3.99
1727 1827 9.913310 TGTAGTCCATATTGACATATCCAAAAA 57.087 29.630 9.43 0.00 37.73 1.94
1731 1831 7.105588 GCATGTAGTCCATATTGACATATCCA 58.894 38.462 9.43 0.00 37.73 3.41
1732 1832 6.256539 CGCATGTAGTCCATATTGACATATCC 59.743 42.308 9.43 0.00 37.73 2.59
1733 1833 7.035612 TCGCATGTAGTCCATATTGACATATC 58.964 38.462 9.43 0.00 37.73 1.63
1734 1834 6.935167 TCGCATGTAGTCCATATTGACATAT 58.065 36.000 9.43 0.00 37.73 1.78
1735 1835 6.339587 TCGCATGTAGTCCATATTGACATA 57.660 37.500 9.43 0.00 37.73 2.29
1736 1836 5.213891 TCGCATGTAGTCCATATTGACAT 57.786 39.130 9.43 0.00 37.73 3.06
1737 1837 4.664150 TCGCATGTAGTCCATATTGACA 57.336 40.909 9.43 0.00 37.73 3.58
1739 1839 5.276461 AGTTCGCATGTAGTCCATATTGA 57.724 39.130 0.00 0.00 30.71 2.57
1740 1840 7.477144 TTTAGTTCGCATGTAGTCCATATTG 57.523 36.000 0.00 0.00 30.71 1.90
1741 1841 8.559536 CATTTTAGTTCGCATGTAGTCCATATT 58.440 33.333 0.00 0.00 30.71 1.28
1742 1842 7.931407 TCATTTTAGTTCGCATGTAGTCCATAT 59.069 33.333 0.00 0.00 30.71 1.78
1743 1843 7.269316 TCATTTTAGTTCGCATGTAGTCCATA 58.731 34.615 0.00 0.00 30.71 2.74
1744 1844 6.112734 TCATTTTAGTTCGCATGTAGTCCAT 58.887 36.000 0.00 0.00 0.00 3.41
1745 1845 5.483811 TCATTTTAGTTCGCATGTAGTCCA 58.516 37.500 0.00 0.00 0.00 4.02
1746 1846 5.581085 ACTCATTTTAGTTCGCATGTAGTCC 59.419 40.000 0.00 0.00 0.00 3.85
1747 1847 6.470160 CACTCATTTTAGTTCGCATGTAGTC 58.530 40.000 0.00 0.00 0.00 2.59
1748 1848 5.163854 GCACTCATTTTAGTTCGCATGTAGT 60.164 40.000 0.00 0.00 0.00 2.73
1749 1849 5.163864 TGCACTCATTTTAGTTCGCATGTAG 60.164 40.000 0.00 0.00 0.00 2.74
1750 1850 4.693095 TGCACTCATTTTAGTTCGCATGTA 59.307 37.500 0.00 0.00 0.00 2.29
1751 1851 3.501828 TGCACTCATTTTAGTTCGCATGT 59.498 39.130 0.00 0.00 0.00 3.21
1752 1852 3.848019 GTGCACTCATTTTAGTTCGCATG 59.152 43.478 10.32 0.00 32.86 4.06
1753 1853 3.501828 TGTGCACTCATTTTAGTTCGCAT 59.498 39.130 19.41 0.00 32.86 4.73
1754 1854 2.875317 TGTGCACTCATTTTAGTTCGCA 59.125 40.909 19.41 0.00 32.05 5.10
1755 1855 3.186409 TCTGTGCACTCATTTTAGTTCGC 59.814 43.478 19.41 0.00 0.00 4.70
1756 1856 4.211164 TGTCTGTGCACTCATTTTAGTTCG 59.789 41.667 19.41 0.00 0.00 3.95
1757 1857 5.007626 TGTGTCTGTGCACTCATTTTAGTTC 59.992 40.000 19.41 4.23 39.89 3.01
1758 1858 4.881273 TGTGTCTGTGCACTCATTTTAGTT 59.119 37.500 19.41 0.00 39.89 2.24
1759 1859 4.273480 GTGTGTCTGTGCACTCATTTTAGT 59.727 41.667 19.41 0.00 39.89 2.24
1760 1860 4.273235 TGTGTGTCTGTGCACTCATTTTAG 59.727 41.667 19.41 5.02 37.76 1.85
1761 1861 4.195416 TGTGTGTCTGTGCACTCATTTTA 58.805 39.130 19.41 0.00 37.76 1.52
1762 1862 3.016031 TGTGTGTCTGTGCACTCATTTT 58.984 40.909 19.41 0.00 37.76 1.82
1763 1863 2.642427 TGTGTGTCTGTGCACTCATTT 58.358 42.857 19.41 0.00 37.76 2.32
1764 1864 2.330440 TGTGTGTCTGTGCACTCATT 57.670 45.000 19.41 0.00 37.76 2.57
1765 1865 2.330440 TTGTGTGTCTGTGCACTCAT 57.670 45.000 19.41 0.00 40.84 2.90
1766 1866 2.106477 TTTGTGTGTCTGTGCACTCA 57.894 45.000 19.41 11.67 39.92 3.41
1767 1867 2.855953 GCATTTGTGTGTCTGTGCACTC 60.856 50.000 19.41 9.15 39.89 3.51
1768 1868 1.066002 GCATTTGTGTGTCTGTGCACT 59.934 47.619 19.41 0.00 39.89 4.40
1769 1869 1.480205 GCATTTGTGTGTCTGTGCAC 58.520 50.000 10.75 10.75 39.65 4.57
1770 1870 0.029167 CGCATTTGTGTGTCTGTGCA 59.971 50.000 0.00 0.00 33.09 4.57
1771 1871 0.029300 ACGCATTTGTGTGTCTGTGC 59.971 50.000 0.00 0.00 37.39 4.57
1772 1872 2.022808 GACGCATTTGTGTGTCTGTG 57.977 50.000 13.22 0.00 43.64 3.66
1776 1876 6.822073 TGTATATAGACGCATTTGTGTGTC 57.178 37.500 12.74 12.74 46.35 3.67
1777 1877 7.169813 CAGATGTATATAGACGCATTTGTGTGT 59.830 37.037 0.74 0.07 39.12 3.72
1778 1878 7.382218 TCAGATGTATATAGACGCATTTGTGTG 59.618 37.037 0.74 0.00 39.12 3.82
1779 1879 7.433680 TCAGATGTATATAGACGCATTTGTGT 58.566 34.615 0.00 0.00 42.13 3.72
1780 1880 7.873739 TCAGATGTATATAGACGCATTTGTG 57.126 36.000 0.00 0.00 0.00 3.33
1781 1881 9.144747 GAATCAGATGTATATAGACGCATTTGT 57.855 33.333 0.00 0.00 0.00 2.83
1782 1882 9.143631 TGAATCAGATGTATATAGACGCATTTG 57.856 33.333 0.00 0.00 0.00 2.32
1783 1883 9.881649 ATGAATCAGATGTATATAGACGCATTT 57.118 29.630 0.00 0.00 0.00 2.32
1787 1887 9.457110 CCTTATGAATCAGATGTATATAGACGC 57.543 37.037 0.00 0.00 0.00 5.19
1797 1897 9.606631 GTTCTAACTTCCTTATGAATCAGATGT 57.393 33.333 0.00 0.00 31.06 3.06
1798 1898 9.605275 TGTTCTAACTTCCTTATGAATCAGATG 57.395 33.333 0.00 0.00 31.06 2.90
1800 1900 9.823647 GATGTTCTAACTTCCTTATGAATCAGA 57.176 33.333 0.00 0.00 31.06 3.27
1801 1901 9.829507 AGATGTTCTAACTTCCTTATGAATCAG 57.170 33.333 5.41 0.00 34.61 2.90
1811 1911 9.765795 CCGAAATATAAGATGTTCTAACTTCCT 57.234 33.333 5.41 0.00 34.61 3.36
1812 1912 9.760077 TCCGAAATATAAGATGTTCTAACTTCC 57.240 33.333 5.41 0.00 34.61 3.46
1815 1915 9.627395 CGATCCGAAATATAAGATGTTCTAACT 57.373 33.333 0.00 0.00 0.00 2.24
1816 1916 8.861101 CCGATCCGAAATATAAGATGTTCTAAC 58.139 37.037 0.00 0.00 0.00 2.34
1817 1917 8.799367 TCCGATCCGAAATATAAGATGTTCTAA 58.201 33.333 0.00 0.00 0.00 2.10
1818 1918 8.344446 TCCGATCCGAAATATAAGATGTTCTA 57.656 34.615 0.00 0.00 0.00 2.10
1819 1919 7.228314 TCCGATCCGAAATATAAGATGTTCT 57.772 36.000 0.00 0.00 0.00 3.01
1820 1920 7.010552 CCATCCGATCCGAAATATAAGATGTTC 59.989 40.741 0.00 0.00 0.00 3.18
1821 1921 6.818644 CCATCCGATCCGAAATATAAGATGTT 59.181 38.462 0.00 0.00 0.00 2.71
1822 1922 6.154534 TCCATCCGATCCGAAATATAAGATGT 59.845 38.462 0.00 0.00 0.00 3.06
1823 1923 6.573434 TCCATCCGATCCGAAATATAAGATG 58.427 40.000 0.00 0.00 0.00 2.90
1824 1924 6.381420 ACTCCATCCGATCCGAAATATAAGAT 59.619 38.462 0.00 0.00 0.00 2.40
1825 1925 5.715279 ACTCCATCCGATCCGAAATATAAGA 59.285 40.000 0.00 0.00 0.00 2.10
1826 1926 5.967088 ACTCCATCCGATCCGAAATATAAG 58.033 41.667 0.00 0.00 0.00 1.73
1827 1927 5.995565 ACTCCATCCGATCCGAAATATAA 57.004 39.130 0.00 0.00 0.00 0.98
1828 1928 6.420638 TCTACTCCATCCGATCCGAAATATA 58.579 40.000 0.00 0.00 0.00 0.86
1829 1929 5.262009 TCTACTCCATCCGATCCGAAATAT 58.738 41.667 0.00 0.00 0.00 1.28
1830 1930 4.659115 TCTACTCCATCCGATCCGAAATA 58.341 43.478 0.00 0.00 0.00 1.40
1831 1931 3.497332 TCTACTCCATCCGATCCGAAAT 58.503 45.455 0.00 0.00 0.00 2.17
1832 1932 2.940158 TCTACTCCATCCGATCCGAAA 58.060 47.619 0.00 0.00 0.00 3.46
1833 1933 2.621998 GTTCTACTCCATCCGATCCGAA 59.378 50.000 0.00 0.00 0.00 4.30
1834 1934 2.228059 GTTCTACTCCATCCGATCCGA 58.772 52.381 0.00 0.00 0.00 4.55
1835 1935 1.954382 TGTTCTACTCCATCCGATCCG 59.046 52.381 0.00 0.00 0.00 4.18
1836 1936 4.120589 GTTTGTTCTACTCCATCCGATCC 58.879 47.826 0.00 0.00 0.00 3.36
1837 1937 4.567159 GTGTTTGTTCTACTCCATCCGATC 59.433 45.833 0.00 0.00 0.00 3.69
1838 1938 4.020573 TGTGTTTGTTCTACTCCATCCGAT 60.021 41.667 0.00 0.00 0.00 4.18
1839 1939 3.322541 TGTGTTTGTTCTACTCCATCCGA 59.677 43.478 0.00 0.00 0.00 4.55
1840 1940 3.432252 GTGTGTTTGTTCTACTCCATCCG 59.568 47.826 0.00 0.00 0.00 4.18
1841 1941 4.385825 TGTGTGTTTGTTCTACTCCATCC 58.614 43.478 0.00 0.00 0.00 3.51
1842 1942 6.371809 TTTGTGTGTTTGTTCTACTCCATC 57.628 37.500 0.00 0.00 0.00 3.51
1844 1944 6.767524 AATTTGTGTGTTTGTTCTACTCCA 57.232 33.333 0.00 0.00 0.00 3.86
1847 1947 7.826690 AGACAAATTTGTGTGTTTGTTCTACT 58.173 30.769 27.85 10.93 45.59 2.57
1850 1950 6.586082 GTGAGACAAATTTGTGTGTTTGTTCT 59.414 34.615 27.85 14.70 45.59 3.01
1851 1951 6.586082 AGTGAGACAAATTTGTGTGTTTGTTC 59.414 34.615 27.85 10.72 45.59 3.18
1860 1960 4.136796 TCCTCCAGTGAGACAAATTTGTG 58.863 43.478 27.85 12.24 42.43 3.33
1865 1965 4.384978 CCATGATCCTCCAGTGAGACAAAT 60.385 45.833 0.00 0.00 41.42 2.32
1866 1966 3.054875 CCATGATCCTCCAGTGAGACAAA 60.055 47.826 0.00 0.00 41.42 2.83
1867 1967 2.502947 CCATGATCCTCCAGTGAGACAA 59.497 50.000 0.00 0.00 41.42 3.18
1868 1968 2.113807 CCATGATCCTCCAGTGAGACA 58.886 52.381 0.00 0.00 41.42 3.41
1869 1969 1.415659 CCCATGATCCTCCAGTGAGAC 59.584 57.143 0.00 0.00 41.42 3.36
1870 1970 1.693726 CCCCATGATCCTCCAGTGAGA 60.694 57.143 0.00 0.00 41.42 3.27
1871 1971 0.763652 CCCCATGATCCTCCAGTGAG 59.236 60.000 0.00 0.00 38.42 3.51
1873 1973 0.763652 CTCCCCATGATCCTCCAGTG 59.236 60.000 0.00 0.00 0.00 3.66
1875 1975 1.776975 GCCTCCCCATGATCCTCCAG 61.777 65.000 0.00 0.00 0.00 3.86
1885 2058 1.002069 TTCAGTTGATGCCTCCCCAT 58.998 50.000 0.00 0.00 0.00 4.00
1888 2061 1.909700 TTGTTCAGTTGATGCCTCCC 58.090 50.000 0.00 0.00 0.00 4.30
1892 2065 6.012658 TGTATTCTTTGTTCAGTTGATGCC 57.987 37.500 0.00 0.00 0.00 4.40
2024 2213 0.665835 TGCTTTGTACACGGGCTTTG 59.334 50.000 0.00 0.00 0.00 2.77
2098 2287 3.570125 TGATCTGATCCGATAGAGCGTTT 59.430 43.478 14.71 0.00 32.26 3.60
2257 2446 3.230134 CCTCCATTTGTCCTTGTTTCCA 58.770 45.455 0.00 0.00 0.00 3.53
2262 2451 3.611025 TTTCCCTCCATTTGTCCTTGT 57.389 42.857 0.00 0.00 0.00 3.16
2266 2455 4.344104 TCTCATTTTCCCTCCATTTGTCC 58.656 43.478 0.00 0.00 0.00 4.02
2267 2456 5.982890 TTCTCATTTTCCCTCCATTTGTC 57.017 39.130 0.00 0.00 0.00 3.18
2278 2467 8.677300 TGTACTAAAGCATCATTCTCATTTTCC 58.323 33.333 0.00 0.00 0.00 3.13
2280 2469 9.846248 GTTGTACTAAAGCATCATTCTCATTTT 57.154 29.630 0.00 0.00 0.00 1.82
2283 2472 6.238211 GCGTTGTACTAAAGCATCATTCTCAT 60.238 38.462 9.68 0.00 0.00 2.90
2284 2473 5.063438 GCGTTGTACTAAAGCATCATTCTCA 59.937 40.000 9.68 0.00 0.00 3.27
2285 2474 5.493735 GCGTTGTACTAAAGCATCATTCTC 58.506 41.667 9.68 0.00 0.00 2.87
2286 2475 4.332819 GGCGTTGTACTAAAGCATCATTCT 59.667 41.667 14.16 0.00 0.00 2.40
2287 2476 4.495844 GGGCGTTGTACTAAAGCATCATTC 60.496 45.833 14.16 1.43 0.00 2.67
2288 2477 3.377172 GGGCGTTGTACTAAAGCATCATT 59.623 43.478 14.16 0.00 0.00 2.57
2289 2478 2.943033 GGGCGTTGTACTAAAGCATCAT 59.057 45.455 14.16 0.00 0.00 2.45
2290 2479 2.289756 TGGGCGTTGTACTAAAGCATCA 60.290 45.455 14.16 10.29 0.00 3.07
2306 2495 0.468226 TTATAGCAACCTCCTGGGCG 59.532 55.000 0.00 0.00 39.10 6.13
2388 2580 6.155475 CCAGTCAGTGGGTAAATTGAAAAA 57.845 37.500 0.00 0.00 43.63 1.94
2424 2616 5.357314 AGATGCATTTGATCTTCCACTTCTG 59.643 40.000 0.00 0.00 0.00 3.02
2425 2617 5.507637 AGATGCATTTGATCTTCCACTTCT 58.492 37.500 0.00 0.00 0.00 2.85
2565 2758 1.608093 CGAAAGCCGTTGTGCATTGC 61.608 55.000 0.46 0.46 0.00 3.56
2649 2842 3.638160 AGTATTAATGACGCCGTCCCTTA 59.362 43.478 15.60 9.74 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.