>input_sequence_71661
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---------------------------------------------------------------------ATGAGCA----
--------GCGTCACTGCCACCGGCATCTCGCAGTCCACCGGCCCGTGCCTCCTGCTTCGCCAACACCACCGCCGGCGAG
TGGTGCCGCGGTCCCTATTCCGGCGGCAGCCGCGCGGGCACACGA------------CTGCCCGGTGGGCGTGCGGCGCC
AGGAGGCGGGTGAGGTACGAGGAA---GAGGAGGACGAGGAGGAGTACGGGCACAACGAGGAGATGGCGCGGCTGGAGAC
CTACAGCGAGGGGGCGCGCGACGTGGCCCTCCTCGTCACGGCCGCCGTCGACGGCGAGCTTGAGTCCGTGCTCGTCTTCA
AGGTACTCCCTCCGTCTGGAAATACTTGTCATTAAACTGGATAAAAAGAAATGTATCTAGATGTATTTTAGTTCTAGATA
CGTCTATTTTTATCCATTTTGATGACAAATATTTCTGGACGGAGGGAGTACTCCGATACCGATCGACCAGCGCACACTGA
TGCGCGTTGCTTCTTCTACACTGATGCGCGTTGC----------------TGTTGTGCGTGGTGGCAGGGCTTCTCGTCG
AGCCTGAGCGGGAGGACGGCGCCGGACCCGGCCATGAGCGTGCTCCCGGAGAGGGCCGTCATACAGTCCGTCGACGTGGT
CAAGGGGCCGTTCGACCCCGACAACATCGAGTACCTCGAGAAGGATTTGTCATGGGAAGAATTCAAGAGCCGACTCCAAT
AG------------------------------------------------------------------------------
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--
>chr4A_1_TraesCS4A01G266500
TTCCGAGGTTGCCGGGGCGCCACTGCCCTACGACAGCGTCGCAGCTGTGAGGAGCCGGATTAGTATGGTGGCCCCAAATC
TTGTGCGCGTTGACGAGAGGGAGCCTTCGGTGATCTCTGCCGAGGTGAAGCCTCCGGTGAAGCAGCAAGTGAGCCCGGCT
CCATTCAAAGCTGCCGTGGAGAACTTCTACATGACCGACGCGATCACACGGGCTTCCAAGATCATGGCTCAGTGCAGCGC
AACC---TTGAAGAAGTGAGGTCCTACTCTATGTTACGCCCCCTTGAAGAAGTTAAATCATCGGCATACGAGATTTTAGT
TGCTTTTTCCATTTCACTCACCAGTTGTTGCTTGGGAGTAT------------AAATTTGGACTGCCTCTACCCTAGCTA
GATCCGAGGAGCAGCGAAACTTGAAAGCAGTGCATTTTTCTGTAACGTGTGAGAAGCGGAGCATACTTAATAAGCTTGTT
TTGTCCTTTTGAATTAGACGGCAGCCGCAAGCAAATAATTTTGTTGTATTT-GGGTTTTCGCCTGCTCGTTTCACGGTTC
CAGGGTGCAGGCGAATGTAGCTGTATGTGCAAATTAAGGTATACCCC-ATTTTATCATTCACTGGTGTGTTGAATGGCAC
ATAGTTTTGGATCTCCCGTTCTCTTCCTTGGATCATTAGCTTGCATGTTTTGCCGTGGTGCTTGTTTGGCTGATTGGTTT
TCATTGGTACGTACTCCCTACTTGTCTCGGATATGGATGTATCTAGAACTAAAATACATCTAGATGCATCCATTTCTGCG
ACAAGTAATTTCGAAGCATTTCTGCGACAAGTAATTTCGAACGGAGGGAGTAGCAGCTAACAAAAATTCTGATCTGCGTA
ATGATGATACATCTCGTCCATGGCAGCAGAAAGCCAAGGTGAAGCTCCTTGTGCTAATAATACTGCGAACGAATGCGACC
AAACAAA-------ACCGCGCCTTATCCTCCCAACCAAG-----GCTCATCGCGCCGCGCCCCAGCATCATGAGCA----
--------GCGTCACTGCCACCGGCATCTCGCAGTCCACCGGCCCGTGCCTCCTGCTTCGCCAACACCACCGCCGGCGAG
TGGTGCCGCGGTCCCTATTCCGGCGGCAGCCGCGCGGGCACACGA------------CTGCCCGGTGGGCGTGCGGCGCC
AGGAGGCGGGTGAGGTACGAGGAA---GAGGAGGACGAGGAGGAGTACGGGCACAACGAGGAGATGGCGCGGCTGGAGAC
CTACAGCGAGGGGGCGCGCGACGTGGCCCTCCTCGTCACGGCCGCCGTCGACGGCGAGCTTGAGTCCGTGCTCGTCTTCA
AGGTACTCCCTCCGTCTGGAAATACTTGTCATTAAACTGGATAAAAAGAAATGTATCTAGATGTATTTTAGTTCTAGATA
CGTCTATTTTTATCCATTTTGATGACAAATATTTCTGGACGGAGGGAGTACTCCGATACCGATCGACCAGCGCACACTGA
TGCGCGTTGCTTCTTCTACACTGATGCGCGTTGC----------------TGTTGTGCGTGGTGGCAGGGCTTCTCGTCG
AGCCTGAGCGGGAGGACGGCGCCGGACCCGGCCATGAGCGTGCTCCCGGAGAGGGCCGTCATACAGTCCGTCGACGTGGT
CAAGGGGCCGTTCGACCCCGACAACATCGAGTACCTCGAGAAGGATTTGTCATGGGAAGAATTCAAGAGCCGACTCCAAT
AGCCAAACAT---------------------------GTATCACCTCTGTTTTGAATCACAAGACGTTTTTGGATATGTC
AATATGGACTACATGCGAACTAAAATGAGTGCACAGACACACAAATGCGTCTATATACATCTGATTCATAAGGAAGTTAG
AACATCTTATATTTCGGATCGGATGGAGTAGAACAAACACACAAATTTGTCTCAC-------------------------
------------------------------------------------TGGAGGATCATGGGGAGG---CAT-----CAA
CTGAACAAAGAATACATCATCTGTATTAAT---ATCGATACGAATCATACAGGAGGCCAAAGGATGGCC-----AAAGAA
GCAACGGTGTCTGTCCATGTCTCGGTGGTAGCCACAAAACAACACTCGGCAACAAAGCCCGTGTACAAAGCATATGCAAA
ACGAATGGAGCATCTCTACTACACATGTTCTATCTGTTCCAGCCGCAAACGCTCTATCGGATCAGATCAGATCATTTCCA
TGCAACCGAGTCGATCTCGTTCCTCGCGGACTTGTACAGCTCCAGCTTCTTCACGAGGGAATCCCTCTTCTCCATCAACG
CGGGATCCTCGTCCAGCATCGCGCTCAGCTGTTTCTTCTGTGTTGTGGAAACAAGGACAAATGGAGGGAAAATGAGAATG
ATGCTTTAGTACAACGCCCAGGAGGTTGCTATAATACT---TATGCAAATGCAAATCAACACAAGGTTACAAAATACACA
AAATTAAAGTCTGGTGAAATTTTTCAATTTACCCACTGACTGGTGCGTGGGTAAACAGAAGTGGAAGATCAAATGCATCT
CTGTATTTATGTGCG-AAAATAGTAGATTCAGTAAGTAGTCAGCAAAAACATACCTCTTTGCTTCCTACATGCGCATAGA
AACGGTTGAGCAAGTTTCTTTTTGCCTCCTTCACTTGGCAATGCACAACGGCTTTCGGAATTGTGTTCCTCAATGTATCG
CAAACCATGTTGATGTAAGATGATACATTCGATCCTGAAATTAAGGGACGGCGTCATTAATACTGCTATATTGTAAACTG
CT
>chr4D_1
TTCCGAGGTTGCCGGGGCTCCACTGCCTTACGACAGCGTCGCAGCTGTGAGGAGCCGGATCAGCATGGTGGCCCCAAATC
TTGTGCGCGTCGACGAGAGGGAGCCATCGGTGATCTCTGCCGAGGTGAAGCCTCCAGTAAAGCAGCAAGTGAGCCCGGCG
CCATTCAAAGCTGCCGTGGAGAACTTCTACATGACCGACGCGATCACACGGGCTTCCAAGATCATGGCTCAGTGCAGCGC
AACCTTGTTGAAGAAGTGAGACCCTGCTCTATGT-ACGTCCCCTTGAAGAAGTTAAATCATCGGCATACGAGATTTTAGT
TGC-TTTTCCATTTCACTCACCAGTTGTTGTTGCTTGGTTGGTTGGGAGCATAAAATTTGGACTGCCTCTACCCTAGCTA
GATCCGAGGAGCAGCGAAACTTGAAAGCAGTGCATTTTTCTGTAACGTGTGAGAAGCGGAGCATACTTAATAAGCTTGTT
TTGTCCTTTTGAATTAGACGGCAGCCGCAAGCAAATAATTTTGTTGTATTTTGGGTTTTCGCCTGCTCGTTTCCCGGTTC
CAGGATGCAGGCAAATGTAGCTGTATGTGCAAATTAAGGTATACCCCCATTTTATCATTCACTGGTGTGTTGAATGGCAC
ATAGCTTTGGACC------------------------------------TTCCTCTCGTTGTTCTTTCTTTGAATGGTTT
ATCCGGATGCTCTGTCAATGCTGCATGCTTGTGCTGGCAAAGATGAGCGTGAGACCATTGCACATTGG------------
-CAAATAATTTCTT------------------------------------------------------------------
--------------------------------GTCAGGGAGATCCTTGCTGTGCTGCTACCCTTGCGAGTACCACCAAGC
AAAACAAGGCTCGTACCGCGCCTTATCCTCCCAACACAACCTACGCTCATCGCGCCGCGCTCCAGCACCGTGAGCATGGC
GTTGCACTGCGCTGCCGCCGTCAGCGTCTCGCCGTCCACCGGCCAGTGCCTCCTGCATCGTCAACACCACCGCCGGTGTG
CTGTGCCAAGGCCACGGTTCCGGCCGCAGCCACGCGGCCTGACAACCACCGGTGGCCCTGCCCGGTGGGCGTGCGGCGCC
AGGAGGCGGGTGAGGTACGAGGAAGAGGATGAGGACGAGGAGGAGTACGGGCACAACGAGGAGATGGCGCGGCTGGAGGC
CTACAGCGAGGGAGCGCGCGACGTGGCCCTCCTGGTCACGGCCGCCGTCGACGGCGAGCTCGAGCCCGTGCTCGTCTTCA
AGGTACTCC-----------------------------------------------------------------------
------------------------------------------------------GATACCGATCCACCAGCGCACACGGA
TGCACGTTGCTTCTTCTACATGTAGCCCATTTGGTTACGGATGGATGCCTTGTTGTGCGTGGTGGCAGGGCTTCTCGTCG
AGCCTGAGCGGGAGGACGGCGCCGGACCCGGCCATGAGCGTGCTCCCGGAGAGGGCCGTCATACAGCGCGTCGACGTGGT
CAAGGGGCCGTTCGACCCCAGCAACATCGAATACCTCGAGAAGGATCTGCCATGGGAAGAATTCAAGAGCCGCCTCCAAT
AGCAAAACATGTAATAGAATTGTACTGTAGACAGGTTGTGAATCTTCTGCTGTTTGTGACCAATCAGTTCAATTGGAGAT
C-------------------------------------------------------------------------------
----------------------AAGGCATGAAAAAGATGATGAATACGCATGGAACT-----------------------
-----------------------------------------------TTGGAGGATCGTGAGAAAGCATCAT-----CAA
TTGAACAAAGAATACATCATCTGCATTAACATAATCGATACGAATCATACAGGAGGCCAAAGGATGGTTGGCCAAAAGAA
GCAACGGTGTCTGTCCATGTCCCGGTGGTAGCCACAAGACAACACTCGGCAAGAAAGCCCGTGTACAAAGCATATGCAAA
ACGAATGGAGCATCTCTACTACACACGTTCTATCTGTTCCAGCCGCGAACGCTCTATCGGATCAGATCAGATCATTTCCA
TGCAACCGAGTCGATCTCGTTCCTAGCGGACTTGTACAGCTCCAGCTTCTTCACGAGGGAATCCCTCTTCTCCATCAACG
CGGGATCCTCGTCCAGCATCGCGCTCAGCTGTTTCTTCTGTGTTGCGGAAGCAAAAACAAATGGAGAGCAAGGAGA---G
ATGCTTTAGTACAATGCCCAGGAGGTTGCTATAATACTACTTATGCAAATGCAAATCAACGCAAGGTTAAAAAATACGCA
AAATTGAAGTCTGGTGAAAATTTTCAATTTGCCCACTGACTGGTGCATGGGTAAATTGAAGTGGAAGATCAAATGCATCT
CTGTATTTATGTGCG-AAAATAGTAGATTCAGCAAGTAGTTAGCAAAAACATACCTCTTTGCTTCCTACATGCGCATAGA
AACGGTTGAGCAAGTTTCTTTTTGCCTCCTTCACTTGACAATGCACAACGGCTTTCGGAATTGTGTTCCTCAATGTATCG
CAAACCATGTTGATGTAAGATGATACATTTGATCCTGAAACAATGGGACGGCGTCATTAATACTGGTATATTGTAAACTG
--
>chr4B_1
TTCCGAGGTTGCCGGGGCTCCACTGCCTTACGACAGCGTCACAGCTGTGAGGAGCCGGATCAGCATGGTGGCCCCAAACC
TTGTGCGCGTCGATGAGAGGGAGCCGTCGGTGATCTCTGCCGAGGTGAAGCCTCCGGTGAAGCAGCAAGTGAGCCCTGCC
CCATTCAAAGCTGCCGTGGAGAACTTCTACATGACCGACGCGATCACGCGGGCTTCCAAGATCATGGCTCAGTGCAGCGC
AACCTTGTTGAAGAAGTGAGGCCCTACTCTATGTTACGCCCCCTTGAAGAAGTTAAATTGTCGGCATACGAGATTTTAGT
TGC-TTTTCCATTTCACTCACCA---GTTGTTGCTTGGTTGGTTGGGAGCATAAAATTTGGACTGCCTCTACCCTAGCTA
GATCCGAGGAGCAGCGAAACTTGAAAGCAGTGCATTTTTCTGTAACGTGTGAGAAGCGGAGCATACTTAATAAGCTTGTT
TTGTCCTTTCGAATTAGACGGCAGCCGCAAGCAAATAATTTTGTTGTATT-TGGGTTTTCGCCTGCTCGTTTCCCGGTTC
CAGGAAGCAGGCAAATGTAGCTGTATGTGCAAATTAAGGTATACCCCCATTTTATCATTCACTGGTGTGCTGAATGCCAC
ATAGCTTTGGA---------------------------------------------------------------------
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>chr4B_1125
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---------------------------------------------------------CTGCCCGGTTGGCGTGCGGCGCC
AGGAGGCGGGTGAGGCACGAGGAAGAGGAGGAGGACGAGGAGGAGTACGGGCACAACGAGGAGATGGCGCGGCTGGAGGC
CTACAGCGAGGGGGCGCGCGACCTGGCCCTCCTCGTCACGGCCGCCGTCGACGGCGACCTCGAGTCCGTGCTCGTCTTCA
AGGTACCTTTTGAGCTTTGACGACG-------------------------------------------------------
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------------CTTCTCCTCGTGGTGCATTTGGTTACGGAT--ATGCCTTGCTGTGCGTTGTGGCAGGGCTTCTCGTCG
AGCCTGAGCGGGAGGACGGCGCCGGACCCGGCCATGAGCGTGCTCCCGGAGCGGGCCGTCATACAGTCCGTCGACGTGGT
GAAGGGCCCGTTCGACCCCAACAACATCGAGTACCTCGAGAAGGATCTGCCATGGGAAGAATTCAAGAGCCGCCTCCAAT
AGCTAAACAATGTAATGACAGAATTGTGGACAGATTTGTAACTCTTCTGCTGTTCGTGACCAATCGGTTTAATTGGGGAT
C-------------------------------------------------------------------------------
----------------------AAGGCGTGAAACAACCATACAAGAGCAATTGCAGACAGATTGTGACTCCTCTGTAAGT
CACCAATCGGTTCATCTGGGGGTCAAGGCATGAAACGACCATATGAGTTTGAGGATCGTGAGGACTGAGGAAGGCGCCAC
TTGAACAAAGAATACATCATCTGAATTAATATCGAT-ATACGAATCATACAGGAGGCCAAAGGATGGCC-----AAAGAA
GCAACGGTGTCTGTCCGTGTTTC---GGTAGCCACAAAACAACACTCGGCAAGAAAGCCCGTGTACAAAGCATATGCAAA
ACGAATGGAGCATCTCTACTACACACGTTCTATCTGTTCCAGCCGCGACGCTTGATA------AGATCAGATCATTTCCA
TGCAACCGAGTCGATCTCGTTCCTCGCGGACTTGTACAGCTCCAGCTTCTTCACGAGGGAATCCCTCTTCTCCATCAACG
CGGGATCCTCGTCCAGCATCGCGCTCAGCTGTTTCTTCTGTGTTGCGGAAGCAAAAACAAACGGAGAGCAAGGAGA---G
ATGCTTTAGTACAATGCCCAGGAGGTTGCTATAATACTACTTGTGCAAATGCAAATCAACACAAGGTTAAAAAATACACA
AGACTAAAGTCTGGTGAAAATTTTCAATTTACCCACTGACTGGCGCGTGGGTAAATTGAAGTGGAAGATCAAATGCATCT
CTGCATTTATGTGCGAAAAATAGTAGATTCAGTAAGTAGTTGGCAAAAACATACCTCTTTGCTTCCTACATGCGCATAGA
AACGGTTGAGCAAGTTTCTTTTTGCCTCCTTCACCTGACAATGCACAACGGCTTTCGGAATTGTGTTCCTCAATGTATCG
CAAACCATGTTGATGTAAGATGATACATTCGATCCTGAAATAAAGGGACGGCATCATTAATACTGGTATATTGTAAACTG
--
>SNPs
------------------S--------S--------------------------------S--S----------------
----------S--------------S-----------------------------------------------------S
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---------------------S----------------------------------------------------------
---S--------------------------S-SSSSS--SS---------------------------------------
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-------------------------------------------------------------------------S------
----S-------S-------------------------------------------------------------------
----S------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-SS-S--SS--S---SSS---S------
SSSSS-S-S-SSSS--SS-S--SSSSS-SSS-SSS-SSSS-SS-SSSSS-S-S-SSSS-SS-S--SSSSSSSSSSSSSSS
S---S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-S--S--S--SS--SSS------SS--SSSS-----SSSSSSS-S-S-
---SS------------------------------SS-S---------------------S------S-S----------
-----------SSS-S---SS-S--S------S-----------S-----------S---S---------------S-S-
SS-----SS--S-S-SS-------S------S-----S-SS--S------------------------------------
------------------------------------------------------------------------------S-
------------------------------------------------------------S-------------------
---------S-SS-SS-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S------------S--
---S-----------------SS-SS-SSS---S----------------------------------------------
--------------------------------------------------------------------------------
-------------------S--------------------------S--S----------------------S-------
---S------------------------------------S-S-S----S-S-SSS-S--S-SS--S---SSSSSSS-SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS-S--S--SS--------S----SSSSSSS-S-S-------------------------
---------------------------------------------------------S--S---S---------------
S----------------------S--------------------------------------------------------
----------------------------------------------------S---------------------------
-------------------------S--------------------S---------------------------------
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---------------------------------------------S----S---SS----------S-S--SSSSSSSS-
--------------S------------------------------------------------------S----------
-------------------S-----------------------------------SS-----------------------
----------------------------------------S---------------------------------------
-------------------------------------S------------------------------------------
-----------------------------------------S-----------------------S--------------
SS
>forward_859
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---------------------------------------AACGGAGGGAGTAGCAGCTA---------------------
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>reverse_1870
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-----------------------------TGCACAGACACACAAATGCG-------------------------------
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--
