Multiple sequence alignment - TraesCS4A01G249500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G249500 chr4A 100.000 3088 0 0 1 3088 560907845 560904758 0.000000e+00 5703.0
1 TraesCS4A01G249500 chr4D 88.941 1501 80 37 850 2315 39408370 39409819 0.000000e+00 1773.0
2 TraesCS4A01G249500 chr4D 97.444 626 11 3 2467 3088 39409821 39410445 0.000000e+00 1062.0
3 TraesCS4A01G249500 chr4D 87.879 330 26 6 1 327 39407236 39407554 2.910000e-100 375.0
4 TraesCS4A01G249500 chr4B 90.275 1347 71 23 864 2195 57863404 57864705 0.000000e+00 1707.0
5 TraesCS4A01G249500 chr4B 88.201 695 51 18 2413 3088 57865001 57865683 0.000000e+00 800.0
6 TraesCS4A01G249500 chr4B 84.940 332 34 8 1 327 57862290 57862610 3.840000e-84 322.0
7 TraesCS4A01G249500 chr4B 93.373 166 10 1 2234 2398 57864693 57864858 8.550000e-61 244.0
8 TraesCS4A01G249500 chr1A 81.904 956 95 40 1077 2008 95832862 95833763 0.000000e+00 736.0
9 TraesCS4A01G249500 chr1D 80.241 911 96 47 1111 2010 100232918 100233755 2.630000e-170 608.0
10 TraesCS4A01G249500 chr7A 89.431 123 12 1 2315 2437 7072630 7072509 1.480000e-33 154.0
11 TraesCS4A01G249500 chr7B 94.737 38 2 0 615 652 446666923 446666886 3.330000e-05 60.2
12 TraesCS4A01G249500 chr5B 94.737 38 2 0 631 668 56553218 56553181 3.330000e-05 60.2
13 TraesCS4A01G249500 chr3D 100.000 29 0 0 640 668 482830141 482830113 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G249500 chr4A 560904758 560907845 3087 True 5703.00 5703 100.000000 1 3088 1 chr4A.!!$R1 3087
1 TraesCS4A01G249500 chr4D 39407236 39410445 3209 False 1070.00 1773 91.421333 1 3088 3 chr4D.!!$F1 3087
2 TraesCS4A01G249500 chr4B 57862290 57865683 3393 False 768.25 1707 89.197250 1 3088 4 chr4B.!!$F1 3087
3 TraesCS4A01G249500 chr1A 95832862 95833763 901 False 736.00 736 81.904000 1077 2008 1 chr1A.!!$F1 931
4 TraesCS4A01G249500 chr1D 100232918 100233755 837 False 608.00 608 80.241000 1111 2010 1 chr1D.!!$F1 899

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
508 824 0.030638 AATGTTGCAACGTGTGAGGC 59.969 50.0 24.41 0.0 0.0 4.70 F
556 872 0.109179 TCGAGCCAATGTTGCAATGC 60.109 50.0 0.59 0.0 0.0 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2034 2820 0.249322 CCTTCACGAACCACACGAGT 60.249 55.0 0.0 0.0 34.7 4.18 R
2343 3139 0.820074 TGAAAATGGTTCACGCCGGT 60.820 50.0 1.9 0.0 0.0 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 0.817654 TCACCACACTATCCGAGCTG 59.182 55.000 0.00 0.00 0.00 4.24
105 106 3.057736 CACATTTCCCAGTTCAGCTCTTG 60.058 47.826 0.00 0.00 0.00 3.02
181 182 8.980143 AAAACTCATTTTCTTTTTCTTCACGA 57.020 26.923 0.00 0.00 32.29 4.35
182 183 8.980143 AAACTCATTTTCTTTTTCTTCACGAA 57.020 26.923 0.00 0.00 0.00 3.85
183 184 8.620533 AACTCATTTTCTTTTTCTTCACGAAG 57.379 30.769 0.08 0.08 39.71 3.79
184 185 7.196331 ACTCATTTTCTTTTTCTTCACGAAGG 58.804 34.615 6.94 0.00 38.88 3.46
185 186 7.067008 ACTCATTTTCTTTTTCTTCACGAAGGA 59.933 33.333 6.94 0.00 38.88 3.36
186 187 7.767261 TCATTTTCTTTTTCTTCACGAAGGAA 58.233 30.769 6.94 1.65 38.88 3.36
187 188 8.413229 TCATTTTCTTTTTCTTCACGAAGGAAT 58.587 29.630 6.94 0.00 35.94 3.01
197 198 4.736126 TCACGAAGGAATAGCTCATTGA 57.264 40.909 0.00 0.00 0.00 2.57
214 215 6.127925 GCTCATTGATTCATGTTGTCCAGTTA 60.128 38.462 0.00 0.00 0.00 2.24
228 229 6.403866 TGTCCAGTTAAATGCTTGTTGAAT 57.596 33.333 0.00 0.00 0.00 2.57
233 234 9.461312 TCCAGTTAAATGCTTGTTGAATATAGT 57.539 29.630 0.00 0.00 0.00 2.12
242 245 5.727791 GCTTGTTGAATATAGTGCTGGTTCG 60.728 44.000 0.00 0.00 0.00 3.95
243 246 3.621268 TGTTGAATATAGTGCTGGTTCGC 59.379 43.478 0.00 0.00 0.00 4.70
245 248 3.717707 TGAATATAGTGCTGGTTCGCTC 58.282 45.455 0.00 0.00 0.00 5.03
269 272 2.096657 TGGTTCAACGTGTGATTGTGTG 59.903 45.455 0.00 0.00 35.70 3.82
282 285 9.393249 CGTGTGATTGTGTGAGTTAATTTTTAT 57.607 29.630 0.00 0.00 0.00 1.40
298 301 3.926821 TTTATGGAAACGCTTGGGTTC 57.073 42.857 3.62 0.00 0.00 3.62
299 302 2.570415 TATGGAAACGCTTGGGTTCA 57.430 45.000 3.62 0.00 0.00 3.18
336 342 7.255555 TTCAGTAAGAAATCTGCAAATTCTGCA 60.256 33.333 12.59 12.59 45.72 4.41
351 667 1.577328 CTGCACACGACCACCCAATC 61.577 60.000 0.00 0.00 0.00 2.67
353 669 2.032634 CACACGACCACCCAATCCG 61.033 63.158 0.00 0.00 0.00 4.18
371 687 1.529226 CGTAGGTGTTGGAATTGGCA 58.471 50.000 0.00 0.00 0.00 4.92
372 688 1.883275 CGTAGGTGTTGGAATTGGCAA 59.117 47.619 0.68 0.68 0.00 4.52
373 689 2.095263 CGTAGGTGTTGGAATTGGCAAG 60.095 50.000 5.96 0.00 0.00 4.01
374 690 0.681175 AGGTGTTGGAATTGGCAAGC 59.319 50.000 5.96 0.00 0.00 4.01
375 691 0.320683 GGTGTTGGAATTGGCAAGCC 60.321 55.000 5.96 10.40 0.00 4.35
376 692 0.392336 GTGTTGGAATTGGCAAGCCA 59.608 50.000 17.60 17.60 45.63 4.75
385 701 3.682766 TGGCAAGCCAATGTTGTTG 57.317 47.368 12.11 0.00 44.12 3.33
386 702 0.829333 TGGCAAGCCAATGTTGTTGT 59.171 45.000 12.11 0.00 44.12 3.32
387 703 1.219646 GGCAAGCCAATGTTGTTGTG 58.780 50.000 6.14 0.00 35.81 3.33
388 704 1.202510 GGCAAGCCAATGTTGTTGTGA 60.203 47.619 6.14 0.00 35.81 3.58
389 705 2.129607 GCAAGCCAATGTTGTTGTGAG 58.870 47.619 0.00 0.00 0.00 3.51
390 706 2.746269 CAAGCCAATGTTGTTGTGAGG 58.254 47.619 0.00 0.00 0.00 3.86
391 707 0.675633 AGCCAATGTTGTTGTGAGGC 59.324 50.000 0.00 0.00 40.85 4.70
392 708 0.664166 GCCAATGTTGTTGTGAGGCG 60.664 55.000 0.00 0.00 0.00 5.52
393 709 0.664166 CCAATGTTGTTGTGAGGCGC 60.664 55.000 0.00 0.00 0.00 6.53
394 710 0.998226 CAATGTTGTTGTGAGGCGCG 60.998 55.000 0.00 0.00 0.00 6.86
395 711 2.128853 AATGTTGTTGTGAGGCGCGG 62.129 55.000 8.83 0.00 0.00 6.46
396 712 4.683334 GTTGTTGTGAGGCGCGGC 62.683 66.667 27.06 27.06 0.00 6.53
399 715 4.683334 GTTGTGAGGCGCGGCAAC 62.683 66.667 34.94 29.36 35.20 4.17
400 716 4.927782 TTGTGAGGCGCGGCAACT 62.928 61.111 34.94 14.86 0.00 3.16
401 717 4.927782 TGTGAGGCGCGGCAACTT 62.928 61.111 34.94 14.43 0.00 2.66
402 718 4.090057 GTGAGGCGCGGCAACTTC 62.090 66.667 34.94 22.80 0.00 3.01
403 719 4.314440 TGAGGCGCGGCAACTTCT 62.314 61.111 34.94 13.12 0.00 2.85
404 720 2.125673 GAGGCGCGGCAACTTCTA 60.126 61.111 34.94 0.00 0.00 2.10
405 721 1.740296 GAGGCGCGGCAACTTCTAA 60.740 57.895 34.94 0.00 0.00 2.10
406 722 1.696832 GAGGCGCGGCAACTTCTAAG 61.697 60.000 34.94 0.00 0.00 2.18
407 723 1.740296 GGCGCGGCAACTTCTAAGA 60.740 57.895 29.32 0.00 0.00 2.10
408 724 1.696832 GGCGCGGCAACTTCTAAGAG 61.697 60.000 29.32 0.00 0.00 2.85
409 725 0.736325 GCGCGGCAACTTCTAAGAGA 60.736 55.000 8.83 0.00 0.00 3.10
410 726 1.272781 CGCGGCAACTTCTAAGAGAG 58.727 55.000 0.00 0.00 0.00 3.20
411 727 1.003108 GCGGCAACTTCTAAGAGAGC 58.997 55.000 0.00 0.00 0.00 4.09
412 728 1.272781 CGGCAACTTCTAAGAGAGCG 58.727 55.000 0.00 0.00 0.00 5.03
413 729 1.135373 CGGCAACTTCTAAGAGAGCGA 60.135 52.381 0.00 0.00 0.00 4.93
414 730 2.263945 GGCAACTTCTAAGAGAGCGAC 58.736 52.381 0.00 0.00 0.00 5.19
415 731 1.914700 GCAACTTCTAAGAGAGCGACG 59.085 52.381 0.00 0.00 0.00 5.12
416 732 2.414293 GCAACTTCTAAGAGAGCGACGA 60.414 50.000 0.00 0.00 0.00 4.20
417 733 3.165124 CAACTTCTAAGAGAGCGACGAC 58.835 50.000 0.00 0.00 0.00 4.34
418 734 1.738908 ACTTCTAAGAGAGCGACGACC 59.261 52.381 0.00 0.00 0.00 4.79
419 735 1.738350 CTTCTAAGAGAGCGACGACCA 59.262 52.381 0.00 0.00 0.00 4.02
420 736 1.085091 TCTAAGAGAGCGACGACCAC 58.915 55.000 0.00 0.00 0.00 4.16
421 737 0.099082 CTAAGAGAGCGACGACCACC 59.901 60.000 0.00 0.00 0.00 4.61
422 738 0.607217 TAAGAGAGCGACGACCACCA 60.607 55.000 0.00 0.00 0.00 4.17
423 739 1.867919 AAGAGAGCGACGACCACCAG 61.868 60.000 0.00 0.00 0.00 4.00
424 740 2.282251 AGAGCGACGACCACCAGA 60.282 61.111 0.00 0.00 0.00 3.86
425 741 1.658686 GAGAGCGACGACCACCAGAT 61.659 60.000 0.00 0.00 0.00 2.90
426 742 1.226717 GAGCGACGACCACCAGATC 60.227 63.158 0.00 0.00 0.00 2.75
427 743 1.658686 GAGCGACGACCACCAGATCT 61.659 60.000 0.00 0.00 0.00 2.75
428 744 1.517257 GCGACGACCACCAGATCTG 60.517 63.158 16.24 16.24 0.00 2.90
429 745 1.883732 CGACGACCACCAGATCTGT 59.116 57.895 21.11 6.95 0.00 3.41
430 746 1.092348 CGACGACCACCAGATCTGTA 58.908 55.000 21.11 0.00 0.00 2.74
431 747 1.064208 CGACGACCACCAGATCTGTAG 59.936 57.143 21.11 12.52 0.00 2.74
432 748 1.405821 GACGACCACCAGATCTGTAGG 59.594 57.143 21.11 21.88 0.00 3.18
433 749 1.272536 ACGACCACCAGATCTGTAGGT 60.273 52.381 27.22 27.22 38.15 3.08
438 754 2.350522 CACCAGATCTGTAGGTGTTGC 58.649 52.381 21.11 0.00 45.95 4.17
439 755 1.977854 ACCAGATCTGTAGGTGTTGCA 59.022 47.619 21.11 0.00 33.57 4.08
440 756 2.371841 ACCAGATCTGTAGGTGTTGCAA 59.628 45.455 21.11 0.00 33.57 4.08
441 757 3.009473 ACCAGATCTGTAGGTGTTGCAAT 59.991 43.478 21.11 0.00 33.57 3.56
442 758 4.012374 CCAGATCTGTAGGTGTTGCAATT 58.988 43.478 21.11 0.00 0.00 2.32
443 759 4.142534 CCAGATCTGTAGGTGTTGCAATTG 60.143 45.833 21.11 0.00 0.00 2.32
455 771 2.679336 GTTGCAATTGGGATTTGATGGC 59.321 45.455 0.59 0.00 0.00 4.40
462 778 1.275856 TGGGATTTGATGGCTTGCAAC 59.724 47.619 0.00 0.00 0.00 4.17
473 789 0.443869 GCTTGCAACGTCGATGATGT 59.556 50.000 12.58 0.00 32.68 3.06
495 811 7.522901 TGTTTCTGAAACACAATCAATGTTG 57.477 32.000 27.14 0.00 45.79 3.33
496 812 6.035866 TGTTTCTGAAACACAATCAATGTTGC 59.964 34.615 27.14 1.41 45.79 4.17
497 813 5.259832 TCTGAAACACAATCAATGTTGCA 57.740 34.783 0.00 0.00 42.25 4.08
498 814 5.658468 TCTGAAACACAATCAATGTTGCAA 58.342 33.333 0.00 0.00 43.52 4.08
499 815 5.519566 TCTGAAACACAATCAATGTTGCAAC 59.480 36.000 22.83 22.83 43.52 4.17
500 816 4.267214 TGAAACACAATCAATGTTGCAACG 59.733 37.500 23.79 10.60 41.67 4.10
501 817 3.435105 ACACAATCAATGTTGCAACGT 57.565 38.095 23.79 21.32 41.46 3.99
502 818 3.114809 ACACAATCAATGTTGCAACGTG 58.885 40.909 24.41 22.99 41.46 4.49
503 819 3.114809 CACAATCAATGTTGCAACGTGT 58.885 40.909 24.41 14.47 41.46 4.49
504 820 3.061073 CACAATCAATGTTGCAACGTGTG 60.061 43.478 24.41 21.20 41.46 3.82
505 821 3.181492 ACAATCAATGTTGCAACGTGTGA 60.181 39.130 24.41 24.93 40.06 3.58
506 822 2.753989 TCAATGTTGCAACGTGTGAG 57.246 45.000 24.41 14.48 0.00 3.51
507 823 1.333308 TCAATGTTGCAACGTGTGAGG 59.667 47.619 24.41 11.96 0.00 3.86
508 824 0.030638 AATGTTGCAACGTGTGAGGC 59.969 50.000 24.41 0.00 0.00 4.70
509 825 2.052237 GTTGCAACGTGTGAGGCG 60.052 61.111 14.90 0.00 0.00 5.52
510 826 2.202946 TTGCAACGTGTGAGGCGA 60.203 55.556 0.00 0.00 0.00 5.54
511 827 2.243957 TTGCAACGTGTGAGGCGAG 61.244 57.895 0.00 0.00 0.00 5.03
512 828 3.414700 GCAACGTGTGAGGCGAGG 61.415 66.667 0.00 0.00 0.00 4.63
513 829 2.738521 CAACGTGTGAGGCGAGGG 60.739 66.667 0.00 0.00 0.00 4.30
514 830 4.003788 AACGTGTGAGGCGAGGGG 62.004 66.667 0.00 0.00 0.00 4.79
515 831 4.988716 ACGTGTGAGGCGAGGGGA 62.989 66.667 0.00 0.00 0.00 4.81
516 832 4.135153 CGTGTGAGGCGAGGGGAG 62.135 72.222 0.00 0.00 0.00 4.30
517 833 4.459089 GTGTGAGGCGAGGGGAGC 62.459 72.222 0.00 0.00 0.00 4.70
518 834 4.704103 TGTGAGGCGAGGGGAGCT 62.704 66.667 0.00 0.00 34.52 4.09
519 835 4.154347 GTGAGGCGAGGGGAGCTG 62.154 72.222 0.00 0.00 34.52 4.24
523 839 3.470888 GGCGAGGGGAGCTGCTTA 61.471 66.667 2.53 0.00 34.52 3.09
524 840 2.584608 GCGAGGGGAGCTGCTTAA 59.415 61.111 2.53 0.00 0.00 1.85
525 841 1.147153 GCGAGGGGAGCTGCTTAAT 59.853 57.895 2.53 0.00 0.00 1.40
526 842 1.162800 GCGAGGGGAGCTGCTTAATG 61.163 60.000 2.53 0.00 0.00 1.90
527 843 0.533755 CGAGGGGAGCTGCTTAATGG 60.534 60.000 2.53 0.00 0.00 3.16
528 844 0.839946 GAGGGGAGCTGCTTAATGGA 59.160 55.000 2.53 0.00 0.00 3.41
529 845 1.423161 GAGGGGAGCTGCTTAATGGAT 59.577 52.381 2.53 0.00 0.00 3.41
530 846 1.855599 AGGGGAGCTGCTTAATGGATT 59.144 47.619 2.53 0.00 0.00 3.01
531 847 1.959282 GGGGAGCTGCTTAATGGATTG 59.041 52.381 2.53 0.00 0.00 2.67
532 848 1.339291 GGGAGCTGCTTAATGGATTGC 59.661 52.381 2.53 0.00 0.00 3.56
533 849 2.026641 GGAGCTGCTTAATGGATTGCA 58.973 47.619 2.53 0.00 0.00 4.08
534 850 2.428171 GGAGCTGCTTAATGGATTGCAA 59.572 45.455 2.53 0.00 34.90 4.08
535 851 3.490419 GGAGCTGCTTAATGGATTGCAAG 60.490 47.826 2.53 0.00 34.90 4.01
536 852 2.429610 AGCTGCTTAATGGATTGCAAGG 59.570 45.455 4.94 0.00 34.90 3.61
537 853 2.167075 GCTGCTTAATGGATTGCAAGGT 59.833 45.455 4.94 0.00 34.90 3.50
538 854 3.736126 GCTGCTTAATGGATTGCAAGGTC 60.736 47.826 4.94 0.00 34.90 3.85
539 855 2.423185 TGCTTAATGGATTGCAAGGTCG 59.577 45.455 4.94 0.00 32.12 4.79
540 856 2.682856 GCTTAATGGATTGCAAGGTCGA 59.317 45.455 4.94 0.00 0.00 4.20
541 857 3.242870 GCTTAATGGATTGCAAGGTCGAG 60.243 47.826 4.94 0.00 0.00 4.04
542 858 1.098050 AATGGATTGCAAGGTCGAGC 58.902 50.000 6.48 6.48 0.00 5.03
543 859 0.749454 ATGGATTGCAAGGTCGAGCC 60.749 55.000 11.73 3.31 37.58 4.70
544 860 1.377202 GGATTGCAAGGTCGAGCCA 60.377 57.895 11.73 0.00 40.61 4.75
545 861 0.960364 GGATTGCAAGGTCGAGCCAA 60.960 55.000 11.73 9.05 40.61 4.52
556 872 0.109179 TCGAGCCAATGTTGCAATGC 60.109 50.000 0.59 0.00 0.00 3.56
557 873 1.407721 CGAGCCAATGTTGCAATGCG 61.408 55.000 0.59 0.00 0.00 4.73
562 878 1.468565 CCAATGTTGCAATGCGAGAGG 60.469 52.381 0.59 0.00 0.00 3.69
563 879 1.200716 CAATGTTGCAATGCGAGAGGT 59.799 47.619 0.59 0.00 0.00 3.85
569 885 1.153289 CAATGCGAGAGGTGAGGGG 60.153 63.158 0.00 0.00 0.00 4.79
573 889 2.885861 CGAGAGGTGAGGGGAACG 59.114 66.667 0.00 0.00 0.00 3.95
586 902 2.125673 GAACGCTGGAGCCGCTTA 60.126 61.111 0.00 0.00 37.91 3.09
587 903 1.740296 GAACGCTGGAGCCGCTTAA 60.740 57.895 0.00 0.00 37.91 1.85
588 904 1.696832 GAACGCTGGAGCCGCTTAAG 61.697 60.000 0.00 0.00 37.91 1.85
589 905 2.892425 CGCTGGAGCCGCTTAAGG 60.892 66.667 4.29 0.00 37.91 2.69
598 914 3.543884 CCGCTTAAGGCCTTGTACA 57.456 52.632 28.77 4.66 37.74 2.90
599 915 1.816074 CCGCTTAAGGCCTTGTACAA 58.184 50.000 28.77 13.14 37.74 2.41
600 916 2.365582 CCGCTTAAGGCCTTGTACAAT 58.634 47.619 28.77 1.45 37.74 2.71
601 917 2.097466 CCGCTTAAGGCCTTGTACAATG 59.903 50.000 28.77 10.71 37.74 2.82
602 918 2.477863 CGCTTAAGGCCTTGTACAATGC 60.478 50.000 28.77 23.06 37.74 3.56
603 919 2.477863 GCTTAAGGCCTTGTACAATGCG 60.478 50.000 28.77 13.90 33.58 4.73
604 920 2.772077 TAAGGCCTTGTACAATGCGA 57.228 45.000 28.77 12.62 33.58 5.10
605 921 1.453155 AAGGCCTTGTACAATGCGAG 58.547 50.000 19.73 7.09 33.58 5.03
606 922 0.392998 AGGCCTTGTACAATGCGAGG 60.393 55.000 23.81 15.83 39.86 4.63
607 923 0.392461 GGCCTTGTACAATGCGAGGA 60.392 55.000 23.81 0.00 39.36 3.71
608 924 1.009829 GCCTTGTACAATGCGAGGAG 58.990 55.000 18.19 0.39 39.36 3.69
619 935 3.253416 GCGAGGAGCGGTACTTAAG 57.747 57.895 0.00 0.00 41.29 1.85
620 936 0.248949 GCGAGGAGCGGTACTTAAGG 60.249 60.000 0.00 0.00 41.29 2.69
621 937 1.386533 CGAGGAGCGGTACTTAAGGA 58.613 55.000 0.00 0.00 36.03 3.36
622 938 1.747355 CGAGGAGCGGTACTTAAGGAA 59.253 52.381 0.00 0.00 36.03 3.36
623 939 2.165030 CGAGGAGCGGTACTTAAGGAAA 59.835 50.000 0.00 0.00 36.03 3.13
624 940 3.734293 CGAGGAGCGGTACTTAAGGAAAG 60.734 52.174 0.00 0.00 37.52 2.62
625 941 6.170302 CGAGGAGCGGTACTTAAGGAAAGT 62.170 50.000 0.00 0.00 43.05 2.66
626 942 3.581770 AGGAGCGGTACTTAAGGAAAGTT 59.418 43.478 7.53 0.00 46.61 2.66
627 943 4.041321 AGGAGCGGTACTTAAGGAAAGTTT 59.959 41.667 7.53 0.00 46.61 2.66
628 944 4.153655 GGAGCGGTACTTAAGGAAAGTTTG 59.846 45.833 7.53 0.00 46.61 2.93
629 945 4.964593 AGCGGTACTTAAGGAAAGTTTGA 58.035 39.130 7.53 0.00 46.61 2.69
630 946 5.557866 AGCGGTACTTAAGGAAAGTTTGAT 58.442 37.500 7.53 0.00 46.61 2.57
631 947 6.002082 AGCGGTACTTAAGGAAAGTTTGATT 58.998 36.000 7.53 0.00 46.61 2.57
632 948 6.489022 AGCGGTACTTAAGGAAAGTTTGATTT 59.511 34.615 7.53 0.00 46.61 2.17
633 949 7.662669 AGCGGTACTTAAGGAAAGTTTGATTTA 59.337 33.333 7.53 0.00 46.61 1.40
634 950 8.456471 GCGGTACTTAAGGAAAGTTTGATTTAT 58.544 33.333 7.53 0.00 46.61 1.40
652 968 9.685276 TTGATTTATTTCTCTAAGCATCTTCCA 57.315 29.630 0.00 0.00 0.00 3.53
653 969 9.857656 TGATTTATTTCTCTAAGCATCTTCCAT 57.142 29.630 0.00 0.00 0.00 3.41
661 977 9.770097 TTCTCTAAGCATCTTCCATTATACAAG 57.230 33.333 0.00 0.00 0.00 3.16
662 978 8.370940 TCTCTAAGCATCTTCCATTATACAAGG 58.629 37.037 0.00 0.00 0.00 3.61
663 979 6.936900 TCTAAGCATCTTCCATTATACAAGGC 59.063 38.462 0.00 0.00 0.00 4.35
664 980 4.401925 AGCATCTTCCATTATACAAGGCC 58.598 43.478 0.00 0.00 0.00 5.19
665 981 4.105377 AGCATCTTCCATTATACAAGGCCT 59.895 41.667 0.00 0.00 0.00 5.19
666 982 5.310594 AGCATCTTCCATTATACAAGGCCTA 59.689 40.000 5.16 0.00 0.00 3.93
678 994 3.377573 ACAAGGCCTAATGGATTGCAAT 58.622 40.909 12.83 12.83 35.96 3.56
682 998 2.287788 GGCCTAATGGATTGCAATGTCG 60.288 50.000 18.59 0.00 34.57 4.35
685 1001 4.677779 GCCTAATGGATTGCAATGTCGTTT 60.678 41.667 18.59 9.04 34.57 3.60
694 1010 7.094592 TGGATTGCAATGTCGTTTATGTTTCTA 60.095 33.333 18.59 0.00 0.00 2.10
705 1022 7.424452 GTCGTTTATGTTTCTAAAACATAGGCG 59.576 37.037 24.76 24.76 42.14 5.52
716 1033 7.481642 TCTAAAACATAGGCGTTGTTTCAAAA 58.518 30.769 17.21 6.78 44.32 2.44
718 1035 4.237349 ACATAGGCGTTGTTTCAAAAGG 57.763 40.909 0.00 0.00 0.00 3.11
719 1036 3.886505 ACATAGGCGTTGTTTCAAAAGGA 59.113 39.130 0.00 0.00 0.00 3.36
720 1037 4.339814 ACATAGGCGTTGTTTCAAAAGGAA 59.660 37.500 0.00 0.00 0.00 3.36
753 1073 2.118294 GGGAGGGCAACAAGGCTT 59.882 61.111 0.00 0.00 43.56 4.35
766 1086 0.536260 AAGGCTTGTGTTGCAAAGCA 59.464 45.000 19.56 10.85 36.53 3.91
770 1090 1.563111 CTTGTGTTGCAAAGCACCAG 58.437 50.000 15.33 11.01 38.71 4.00
802 1122 1.667722 CTTGTTGCAAAGGAGGGCC 59.332 57.895 0.00 0.00 0.00 5.80
820 1143 1.511887 CCTGCCGTGCGAAAAATCG 60.512 57.895 0.00 0.00 0.00 3.34
835 1158 4.758251 TCGGACCCGACGCGTAGA 62.758 66.667 21.43 5.15 44.01 2.59
853 1177 3.413105 AGAGCTCCCCTAATTCTGAGT 57.587 47.619 10.93 0.00 0.00 3.41
854 1178 3.730269 AGAGCTCCCCTAATTCTGAGTT 58.270 45.455 10.93 0.00 0.00 3.01
865 1569 5.900123 CCTAATTCTGAGTTCCTCTCCCTTA 59.100 44.000 0.00 0.00 42.12 2.69
896 1600 5.402568 CGGACTACAATTCTGATTCGGTATG 59.597 44.000 0.00 0.00 0.00 2.39
897 1601 5.696724 GGACTACAATTCTGATTCGGTATGG 59.303 44.000 0.00 0.00 0.00 2.74
898 1602 5.057149 ACTACAATTCTGATTCGGTATGGC 58.943 41.667 0.00 0.00 0.00 4.40
899 1603 3.214328 ACAATTCTGATTCGGTATGGCC 58.786 45.455 0.00 0.00 0.00 5.36
927 1631 1.404315 GGCTTCACTTCCGAATCGAGT 60.404 52.381 3.36 0.00 0.00 4.18
981 1685 2.807108 GCTATAAAAGGAGCCCCAGACG 60.807 54.545 0.00 0.00 32.25 4.18
1508 2240 2.197324 CCGAGGAGGAGGAGGAGG 59.803 72.222 0.00 0.00 45.00 4.30
1618 2353 1.256635 GGCTACGACTACGACTACGAC 59.743 57.143 0.00 0.00 42.66 4.34
2023 2809 3.189285 CGATTGGATTGGATTGCAAACC 58.811 45.455 18.32 18.32 30.43 3.27
2024 2810 3.119029 CGATTGGATTGGATTGCAAACCT 60.119 43.478 24.33 7.23 30.43 3.50
2025 2811 3.959535 TTGGATTGGATTGCAAACCTC 57.040 42.857 24.33 15.15 0.00 3.85
2026 2812 3.173953 TGGATTGGATTGCAAACCTCT 57.826 42.857 24.33 12.75 0.00 3.69
2027 2813 3.091545 TGGATTGGATTGCAAACCTCTC 58.908 45.455 24.33 19.18 0.00 3.20
2028 2814 2.098117 GGATTGGATTGCAAACCTCTCG 59.902 50.000 24.33 0.00 0.00 4.04
2029 2815 2.559698 TTGGATTGCAAACCTCTCGA 57.440 45.000 24.33 3.08 0.00 4.04
2030 2816 1.808411 TGGATTGCAAACCTCTCGAC 58.192 50.000 24.33 0.00 0.00 4.20
2031 2817 0.721718 GGATTGCAAACCTCTCGACG 59.278 55.000 17.92 0.00 0.00 5.12
2032 2818 1.429463 GATTGCAAACCTCTCGACGT 58.571 50.000 1.71 0.00 0.00 4.34
2033 2819 1.798813 GATTGCAAACCTCTCGACGTT 59.201 47.619 1.71 0.00 0.00 3.99
2034 2820 2.512485 TTGCAAACCTCTCGACGTTA 57.488 45.000 0.00 0.00 0.00 3.18
2037 2823 1.984297 GCAAACCTCTCGACGTTACTC 59.016 52.381 0.00 0.00 0.00 2.59
2064 2850 0.321298 TCGTGAAGGGCTAAACCTGC 60.321 55.000 0.00 0.00 40.87 4.85
2084 2870 4.441792 TGCTGCGATTTGTATGTCTGTAT 58.558 39.130 0.00 0.00 0.00 2.29
2085 2871 5.596845 TGCTGCGATTTGTATGTCTGTATA 58.403 37.500 0.00 0.00 0.00 1.47
2146 2932 9.294030 CATTTCTTCTTGGTAGAAAATATGCAC 57.706 33.333 0.00 0.00 42.86 4.57
2172 2958 3.985019 TCTTACCATGGCCGAAGTAAA 57.015 42.857 13.04 0.00 0.00 2.01
2173 2959 4.497291 TCTTACCATGGCCGAAGTAAAT 57.503 40.909 13.04 0.00 0.00 1.40
2174 2960 4.448210 TCTTACCATGGCCGAAGTAAATC 58.552 43.478 13.04 0.00 0.00 2.17
2175 2961 2.799126 ACCATGGCCGAAGTAAATCA 57.201 45.000 13.04 0.00 0.00 2.57
2176 2962 2.643551 ACCATGGCCGAAGTAAATCAG 58.356 47.619 13.04 0.00 0.00 2.90
2177 2963 1.949525 CCATGGCCGAAGTAAATCAGG 59.050 52.381 0.00 0.00 0.00 3.86
2178 2964 2.421388 CCATGGCCGAAGTAAATCAGGA 60.421 50.000 0.00 0.00 0.00 3.86
2179 2965 3.278574 CATGGCCGAAGTAAATCAGGAA 58.721 45.455 0.00 0.00 0.00 3.36
2180 2966 2.706890 TGGCCGAAGTAAATCAGGAAC 58.293 47.619 0.00 0.00 0.00 3.62
2181 2967 1.664151 GGCCGAAGTAAATCAGGAACG 59.336 52.381 0.00 0.00 0.00 3.95
2182 2968 2.613691 GCCGAAGTAAATCAGGAACGA 58.386 47.619 0.00 0.00 0.00 3.85
2183 2969 3.195661 GCCGAAGTAAATCAGGAACGAT 58.804 45.455 0.00 0.00 0.00 3.73
2198 2984 8.459911 TCAGGAACGATATGTTAGTCAAGATA 57.540 34.615 0.00 0.00 42.09 1.98
2213 2999 6.647229 AGTCAAGATATGTTGATCTCTTGCA 58.353 36.000 17.37 0.00 40.31 4.08
2215 3001 7.065563 AGTCAAGATATGTTGATCTCTTGCAAC 59.934 37.037 17.37 8.60 40.31 4.17
2276 3063 4.835056 AGAATTTGTTTCCCCTTTCTCTGG 59.165 41.667 0.00 0.00 34.67 3.86
2311 3107 4.096833 GCATACATCTGGCAAGAATGTGAA 59.903 41.667 15.97 2.59 35.59 3.18
2335 3131 0.584396 TTTTTGACAGTGCTACGGCG 59.416 50.000 4.80 4.80 42.25 6.46
2343 3139 3.383681 TGCTACGGCGGGCTTACA 61.384 61.111 22.80 6.05 42.25 2.41
2416 3318 4.160252 GGTACAAAAGATGGCATCCAACAT 59.840 41.667 23.33 9.74 36.95 2.71
2434 3357 2.371841 ACATACACAAGAAGGCACCAGA 59.628 45.455 0.00 0.00 0.00 3.86
2441 3364 3.217626 CAAGAAGGCACCAGAAAAGAGT 58.782 45.455 0.00 0.00 0.00 3.24
2495 3419 5.113383 TGGATTGATTGCATTGCTGAATTC 58.887 37.500 10.49 0.00 0.00 2.17
2741 3665 3.095912 TCTTGTTCCGGACTCCTGATA 57.904 47.619 1.83 0.00 0.00 2.15
2820 3750 7.907214 ATACATAGTTGGTGTTTTGAGAGAC 57.093 36.000 0.00 0.00 0.00 3.36
3005 3953 2.815503 TGCTTTGTCATCATCCACACTG 59.184 45.455 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.665145 TGGTGAATGAACAGATTCTGTATTTGA 59.335 33.333 19.27 5.72 44.62 2.69
105 106 7.863877 ACTAAATCCCGTTTGTGTTAAATGAAC 59.136 33.333 0.00 0.00 38.65 3.18
160 161 7.417612 TCCTTCGTGAAGAAAAAGAAAATGAG 58.582 34.615 11.11 0.00 40.79 2.90
170 171 5.547465 TGAGCTATTCCTTCGTGAAGAAAA 58.453 37.500 11.11 5.69 40.79 2.29
171 172 5.147330 TGAGCTATTCCTTCGTGAAGAAA 57.853 39.130 11.11 0.00 40.79 2.52
172 173 4.801330 TGAGCTATTCCTTCGTGAAGAA 57.199 40.909 11.11 4.49 40.79 2.52
173 174 5.105351 TCAATGAGCTATTCCTTCGTGAAGA 60.105 40.000 11.11 0.00 40.79 2.87
174 175 5.111989 TCAATGAGCTATTCCTTCGTGAAG 58.888 41.667 2.57 2.57 38.14 3.02
175 176 5.084818 TCAATGAGCTATTCCTTCGTGAA 57.915 39.130 0.00 0.00 0.00 3.18
176 177 4.736126 TCAATGAGCTATTCCTTCGTGA 57.264 40.909 0.00 0.00 0.00 4.35
177 178 5.525012 TGAATCAATGAGCTATTCCTTCGTG 59.475 40.000 4.17 0.00 0.00 4.35
178 179 5.674525 TGAATCAATGAGCTATTCCTTCGT 58.325 37.500 4.17 0.00 0.00 3.85
179 180 6.204301 ACATGAATCAATGAGCTATTCCTTCG 59.796 38.462 0.00 0.00 0.00 3.79
180 181 7.507733 ACATGAATCAATGAGCTATTCCTTC 57.492 36.000 0.00 0.00 0.00 3.46
181 182 7.341256 ACAACATGAATCAATGAGCTATTCCTT 59.659 33.333 0.00 0.00 0.00 3.36
182 183 6.832384 ACAACATGAATCAATGAGCTATTCCT 59.168 34.615 0.00 0.00 0.00 3.36
183 184 7.035840 ACAACATGAATCAATGAGCTATTCC 57.964 36.000 0.00 0.00 0.00 3.01
184 185 7.137426 GGACAACATGAATCAATGAGCTATTC 58.863 38.462 0.00 0.00 0.00 1.75
185 186 6.604396 TGGACAACATGAATCAATGAGCTATT 59.396 34.615 0.00 0.00 0.00 1.73
186 187 6.124340 TGGACAACATGAATCAATGAGCTAT 58.876 36.000 0.00 0.00 0.00 2.97
187 188 5.499313 TGGACAACATGAATCAATGAGCTA 58.501 37.500 0.00 0.00 0.00 3.32
197 198 6.594788 AGCATTTAACTGGACAACATGAAT 57.405 33.333 0.00 0.00 0.00 2.57
214 215 6.153340 ACCAGCACTATATTCAACAAGCATTT 59.847 34.615 0.00 0.00 0.00 2.32
228 229 2.100197 ACAGAGCGAACCAGCACTATA 58.900 47.619 0.00 0.00 36.34 1.31
233 234 2.031012 CCACAGAGCGAACCAGCA 59.969 61.111 0.00 0.00 40.15 4.41
242 245 0.304705 CACACGTTGAACCACAGAGC 59.695 55.000 0.00 0.00 0.00 4.09
243 246 1.934589 TCACACGTTGAACCACAGAG 58.065 50.000 0.00 0.00 0.00 3.35
245 248 2.354510 ACAATCACACGTTGAACCACAG 59.645 45.455 4.87 0.00 37.92 3.66
269 272 7.062956 CCCAAGCGTTTCCATAAAAATTAACTC 59.937 37.037 0.00 0.00 0.00 3.01
282 285 1.104577 GGTGAACCCAAGCGTTTCCA 61.105 55.000 0.00 0.00 0.00 3.53
302 308 5.389935 GCAGATTTCTTACTGAAACCAGTCG 60.390 44.000 0.92 0.00 46.08 4.18
304 310 5.376625 TGCAGATTTCTTACTGAAACCAGT 58.623 37.500 3.47 3.47 46.08 4.00
308 314 8.909671 CAGAATTTGCAGATTTCTTACTGAAAC 58.090 33.333 3.69 0.00 46.08 2.78
327 333 0.951558 GGTGGTCGTGTGCAGAATTT 59.048 50.000 0.00 0.00 0.00 1.82
328 334 0.889186 GGGTGGTCGTGTGCAGAATT 60.889 55.000 0.00 0.00 0.00 2.17
329 335 1.302511 GGGTGGTCGTGTGCAGAAT 60.303 57.895 0.00 0.00 0.00 2.40
330 336 2.110213 GGGTGGTCGTGTGCAGAA 59.890 61.111 0.00 0.00 0.00 3.02
331 337 2.050836 ATTGGGTGGTCGTGTGCAGA 62.051 55.000 0.00 0.00 0.00 4.26
333 339 1.599518 GATTGGGTGGTCGTGTGCA 60.600 57.895 0.00 0.00 0.00 4.57
334 340 2.332654 GGATTGGGTGGTCGTGTGC 61.333 63.158 0.00 0.00 0.00 4.57
336 342 1.186917 TACGGATTGGGTGGTCGTGT 61.187 55.000 0.00 0.00 35.60 4.49
341 657 1.988015 CACCTACGGATTGGGTGGT 59.012 57.895 0.00 0.00 44.63 4.16
351 667 0.808755 GCCAATTCCAACACCTACGG 59.191 55.000 0.00 0.00 0.00 4.02
353 669 2.352715 GCTTGCCAATTCCAACACCTAC 60.353 50.000 0.00 0.00 0.00 3.18
363 679 2.769893 ACAACATTGGCTTGCCAATTC 58.230 42.857 30.44 0.00 38.21 2.17
369 685 2.129607 CTCACAACAACATTGGCTTGC 58.870 47.619 0.00 0.00 0.00 4.01
370 686 2.746269 CCTCACAACAACATTGGCTTG 58.254 47.619 0.00 0.00 0.00 4.01
371 687 1.069049 GCCTCACAACAACATTGGCTT 59.931 47.619 0.00 0.00 36.32 4.35
372 688 0.675633 GCCTCACAACAACATTGGCT 59.324 50.000 0.00 0.00 36.32 4.75
373 689 0.664166 CGCCTCACAACAACATTGGC 60.664 55.000 0.00 0.00 35.94 4.52
374 690 0.664166 GCGCCTCACAACAACATTGG 60.664 55.000 0.00 0.00 0.00 3.16
375 691 0.998226 CGCGCCTCACAACAACATTG 60.998 55.000 0.00 0.00 0.00 2.82
376 692 1.282570 CGCGCCTCACAACAACATT 59.717 52.632 0.00 0.00 0.00 2.71
377 693 2.616330 CCGCGCCTCACAACAACAT 61.616 57.895 0.00 0.00 0.00 2.71
378 694 3.276091 CCGCGCCTCACAACAACA 61.276 61.111 0.00 0.00 0.00 3.33
379 695 4.683334 GCCGCGCCTCACAACAAC 62.683 66.667 0.00 0.00 0.00 3.32
382 698 4.683334 GTTGCCGCGCCTCACAAC 62.683 66.667 0.00 7.77 36.03 3.32
383 699 4.927782 AGTTGCCGCGCCTCACAA 62.928 61.111 0.00 0.00 0.00 3.33
384 700 4.927782 AAGTTGCCGCGCCTCACA 62.928 61.111 0.00 0.00 0.00 3.58
385 701 4.090057 GAAGTTGCCGCGCCTCAC 62.090 66.667 0.00 0.00 0.00 3.51
386 702 2.443260 TTAGAAGTTGCCGCGCCTCA 62.443 55.000 0.00 0.00 0.00 3.86
387 703 1.696832 CTTAGAAGTTGCCGCGCCTC 61.697 60.000 0.00 0.00 0.00 4.70
388 704 1.741770 CTTAGAAGTTGCCGCGCCT 60.742 57.895 0.00 0.00 0.00 5.52
389 705 1.696832 CTCTTAGAAGTTGCCGCGCC 61.697 60.000 0.00 0.00 0.00 6.53
390 706 0.736325 TCTCTTAGAAGTTGCCGCGC 60.736 55.000 0.00 0.00 0.00 6.86
391 707 1.272781 CTCTCTTAGAAGTTGCCGCG 58.727 55.000 0.00 0.00 0.00 6.46
392 708 1.003108 GCTCTCTTAGAAGTTGCCGC 58.997 55.000 0.00 0.00 0.00 6.53
393 709 1.135373 TCGCTCTCTTAGAAGTTGCCG 60.135 52.381 0.00 0.00 0.00 5.69
394 710 2.263945 GTCGCTCTCTTAGAAGTTGCC 58.736 52.381 0.00 0.00 0.00 4.52
395 711 1.914700 CGTCGCTCTCTTAGAAGTTGC 59.085 52.381 0.00 0.00 0.00 4.17
396 712 3.165124 GTCGTCGCTCTCTTAGAAGTTG 58.835 50.000 0.00 0.00 0.00 3.16
397 713 2.162008 GGTCGTCGCTCTCTTAGAAGTT 59.838 50.000 0.00 0.00 0.00 2.66
398 714 1.738908 GGTCGTCGCTCTCTTAGAAGT 59.261 52.381 0.00 0.00 0.00 3.01
399 715 1.738350 TGGTCGTCGCTCTCTTAGAAG 59.262 52.381 0.00 0.00 0.00 2.85
400 716 1.467734 GTGGTCGTCGCTCTCTTAGAA 59.532 52.381 0.00 0.00 0.00 2.10
401 717 1.085091 GTGGTCGTCGCTCTCTTAGA 58.915 55.000 0.00 0.00 0.00 2.10
402 718 0.099082 GGTGGTCGTCGCTCTCTTAG 59.901 60.000 0.00 0.00 0.00 2.18
403 719 0.607217 TGGTGGTCGTCGCTCTCTTA 60.607 55.000 0.00 0.00 0.00 2.10
404 720 1.867919 CTGGTGGTCGTCGCTCTCTT 61.868 60.000 0.00 0.00 0.00 2.85
405 721 2.282251 TGGTGGTCGTCGCTCTCT 60.282 61.111 0.00 0.00 0.00 3.10
406 722 1.658686 ATCTGGTGGTCGTCGCTCTC 61.659 60.000 0.00 0.00 0.00 3.20
407 723 1.658686 GATCTGGTGGTCGTCGCTCT 61.659 60.000 0.00 0.00 0.00 4.09
408 724 1.226717 GATCTGGTGGTCGTCGCTC 60.227 63.158 0.00 0.00 0.00 5.03
409 725 1.679305 AGATCTGGTGGTCGTCGCT 60.679 57.895 0.00 0.00 0.00 4.93
410 726 1.517257 CAGATCTGGTGGTCGTCGC 60.517 63.158 15.38 0.00 0.00 5.19
411 727 1.064208 CTACAGATCTGGTGGTCGTCG 59.936 57.143 26.08 0.00 34.19 5.12
412 728 1.405821 CCTACAGATCTGGTGGTCGTC 59.594 57.143 26.08 0.00 34.19 4.20
413 729 1.272536 ACCTACAGATCTGGTGGTCGT 60.273 52.381 26.30 12.79 36.19 4.34
414 730 1.135139 CACCTACAGATCTGGTGGTCG 59.865 57.143 28.04 21.49 45.29 4.79
415 731 2.969628 CACCTACAGATCTGGTGGTC 57.030 55.000 28.04 0.00 45.29 4.02
419 735 1.977854 TGCAACACCTACAGATCTGGT 59.022 47.619 26.08 12.34 34.19 4.00
420 736 2.768253 TGCAACACCTACAGATCTGG 57.232 50.000 26.08 11.66 34.19 3.86
421 737 4.142534 CCAATTGCAACACCTACAGATCTG 60.143 45.833 21.37 21.37 0.00 2.90
422 738 4.012374 CCAATTGCAACACCTACAGATCT 58.988 43.478 0.00 0.00 0.00 2.75
423 739 3.129287 CCCAATTGCAACACCTACAGATC 59.871 47.826 0.00 0.00 0.00 2.75
424 740 3.091545 CCCAATTGCAACACCTACAGAT 58.908 45.455 0.00 0.00 0.00 2.90
425 741 2.107378 TCCCAATTGCAACACCTACAGA 59.893 45.455 0.00 0.00 0.00 3.41
426 742 2.513753 TCCCAATTGCAACACCTACAG 58.486 47.619 0.00 0.00 0.00 2.74
427 743 2.666272 TCCCAATTGCAACACCTACA 57.334 45.000 0.00 0.00 0.00 2.74
428 744 4.021544 TCAAATCCCAATTGCAACACCTAC 60.022 41.667 0.00 0.00 0.00 3.18
429 745 4.155709 TCAAATCCCAATTGCAACACCTA 58.844 39.130 0.00 0.00 0.00 3.08
430 746 2.971330 TCAAATCCCAATTGCAACACCT 59.029 40.909 0.00 0.00 0.00 4.00
431 747 3.399440 TCAAATCCCAATTGCAACACC 57.601 42.857 0.00 0.00 0.00 4.16
432 748 3.685756 CCATCAAATCCCAATTGCAACAC 59.314 43.478 0.00 0.00 0.00 3.32
433 749 3.869140 GCCATCAAATCCCAATTGCAACA 60.869 43.478 0.00 0.00 0.00 3.33
434 750 2.679336 GCCATCAAATCCCAATTGCAAC 59.321 45.455 0.00 0.00 0.00 4.17
435 751 2.572556 AGCCATCAAATCCCAATTGCAA 59.427 40.909 0.00 0.00 0.00 4.08
436 752 2.189676 AGCCATCAAATCCCAATTGCA 58.810 42.857 0.00 0.00 0.00 4.08
437 753 2.940410 CAAGCCATCAAATCCCAATTGC 59.060 45.455 0.00 0.00 0.00 3.56
438 754 2.940410 GCAAGCCATCAAATCCCAATTG 59.060 45.455 0.00 0.00 0.00 2.32
439 755 2.572556 TGCAAGCCATCAAATCCCAATT 59.427 40.909 0.00 0.00 0.00 2.32
440 756 2.189676 TGCAAGCCATCAAATCCCAAT 58.810 42.857 0.00 0.00 0.00 3.16
441 757 1.642112 TGCAAGCCATCAAATCCCAA 58.358 45.000 0.00 0.00 0.00 4.12
442 758 1.275856 GTTGCAAGCCATCAAATCCCA 59.724 47.619 0.00 0.00 0.00 4.37
443 759 1.736696 CGTTGCAAGCCATCAAATCCC 60.737 52.381 0.00 0.00 0.00 3.85
455 771 2.880822 AACATCATCGACGTTGCAAG 57.119 45.000 0.00 0.00 0.00 4.01
462 778 4.645667 TGTTTCAGAAACATCATCGACG 57.354 40.909 22.53 0.00 45.79 5.12
473 789 6.104665 TGCAACATTGATTGTGTTTCAGAAA 58.895 32.000 0.00 0.00 38.99 2.52
484 800 3.370276 TCACACGTTGCAACATTGATTG 58.630 40.909 28.01 17.74 0.00 2.67
485 801 3.550639 CCTCACACGTTGCAACATTGATT 60.551 43.478 28.01 7.76 0.00 2.57
486 802 2.030893 CCTCACACGTTGCAACATTGAT 60.031 45.455 28.01 12.25 0.00 2.57
490 806 1.654220 GCCTCACACGTTGCAACAT 59.346 52.632 28.01 11.97 0.00 2.71
491 807 2.818487 CGCCTCACACGTTGCAACA 61.818 57.895 28.01 8.32 0.00 3.33
492 808 2.052237 CGCCTCACACGTTGCAAC 60.052 61.111 19.89 19.89 0.00 4.17
493 809 2.202946 TCGCCTCACACGTTGCAA 60.203 55.556 0.00 0.00 0.00 4.08
494 810 2.661537 CTCGCCTCACACGTTGCA 60.662 61.111 0.00 0.00 0.00 4.08
495 811 3.414700 CCTCGCCTCACACGTTGC 61.415 66.667 0.00 0.00 0.00 4.17
496 812 2.738521 CCCTCGCCTCACACGTTG 60.739 66.667 0.00 0.00 0.00 4.10
497 813 4.003788 CCCCTCGCCTCACACGTT 62.004 66.667 0.00 0.00 0.00 3.99
498 814 4.988716 TCCCCTCGCCTCACACGT 62.989 66.667 0.00 0.00 0.00 4.49
499 815 4.135153 CTCCCCTCGCCTCACACG 62.135 72.222 0.00 0.00 0.00 4.49
500 816 4.459089 GCTCCCCTCGCCTCACAC 62.459 72.222 0.00 0.00 0.00 3.82
501 817 4.704103 AGCTCCCCTCGCCTCACA 62.704 66.667 0.00 0.00 0.00 3.58
502 818 4.154347 CAGCTCCCCTCGCCTCAC 62.154 72.222 0.00 0.00 0.00 3.51
505 821 3.984186 TAAGCAGCTCCCCTCGCCT 62.984 63.158 0.00 0.00 0.00 5.52
506 822 2.330924 ATTAAGCAGCTCCCCTCGCC 62.331 60.000 0.00 0.00 0.00 5.54
507 823 1.147153 ATTAAGCAGCTCCCCTCGC 59.853 57.895 0.00 0.00 0.00 5.03
508 824 0.533755 CCATTAAGCAGCTCCCCTCG 60.534 60.000 0.00 0.00 0.00 4.63
509 825 0.839946 TCCATTAAGCAGCTCCCCTC 59.160 55.000 0.00 0.00 0.00 4.30
510 826 1.527457 ATCCATTAAGCAGCTCCCCT 58.473 50.000 0.00 0.00 0.00 4.79
511 827 1.959282 CAATCCATTAAGCAGCTCCCC 59.041 52.381 0.00 0.00 0.00 4.81
512 828 1.339291 GCAATCCATTAAGCAGCTCCC 59.661 52.381 0.00 0.00 0.00 4.30
513 829 2.026641 TGCAATCCATTAAGCAGCTCC 58.973 47.619 0.00 0.00 32.48 4.70
514 830 3.490419 CCTTGCAATCCATTAAGCAGCTC 60.490 47.826 0.00 0.00 38.35 4.09
515 831 2.429610 CCTTGCAATCCATTAAGCAGCT 59.570 45.455 0.00 0.00 38.35 4.24
516 832 2.167075 ACCTTGCAATCCATTAAGCAGC 59.833 45.455 0.00 0.00 38.35 5.25
517 833 3.488047 CGACCTTGCAATCCATTAAGCAG 60.488 47.826 0.00 0.00 38.35 4.24
518 834 2.423185 CGACCTTGCAATCCATTAAGCA 59.577 45.455 0.00 0.00 34.79 3.91
519 835 2.682856 TCGACCTTGCAATCCATTAAGC 59.317 45.455 0.00 0.00 0.00 3.09
520 836 3.242870 GCTCGACCTTGCAATCCATTAAG 60.243 47.826 0.00 0.00 0.00 1.85
521 837 2.682856 GCTCGACCTTGCAATCCATTAA 59.317 45.455 0.00 0.00 0.00 1.40
522 838 2.288666 GCTCGACCTTGCAATCCATTA 58.711 47.619 0.00 0.00 0.00 1.90
523 839 1.098050 GCTCGACCTTGCAATCCATT 58.902 50.000 0.00 0.00 0.00 3.16
524 840 0.749454 GGCTCGACCTTGCAATCCAT 60.749 55.000 0.00 0.00 34.51 3.41
525 841 1.377202 GGCTCGACCTTGCAATCCA 60.377 57.895 0.00 0.00 34.51 3.41
526 842 0.960364 TTGGCTCGACCTTGCAATCC 60.960 55.000 0.00 0.00 40.22 3.01
527 843 1.098050 ATTGGCTCGACCTTGCAATC 58.902 50.000 0.00 0.00 40.22 2.67
528 844 0.813184 CATTGGCTCGACCTTGCAAT 59.187 50.000 0.00 0.00 40.22 3.56
529 845 0.537143 ACATTGGCTCGACCTTGCAA 60.537 50.000 0.00 0.00 40.22 4.08
530 846 0.537143 AACATTGGCTCGACCTTGCA 60.537 50.000 5.77 0.00 40.22 4.08
531 847 0.109597 CAACATTGGCTCGACCTTGC 60.110 55.000 5.77 0.00 40.22 4.01
532 848 0.109597 GCAACATTGGCTCGACCTTG 60.110 55.000 5.77 6.04 40.22 3.61
533 849 0.537143 TGCAACATTGGCTCGACCTT 60.537 50.000 5.77 0.00 40.22 3.50
534 850 0.537143 TTGCAACATTGGCTCGACCT 60.537 50.000 0.00 0.00 40.22 3.85
535 851 0.527565 ATTGCAACATTGGCTCGACC 59.472 50.000 0.00 0.00 39.84 4.79
536 852 1.621107 CATTGCAACATTGGCTCGAC 58.379 50.000 0.00 0.00 0.00 4.20
537 853 0.109179 GCATTGCAACATTGGCTCGA 60.109 50.000 0.00 0.00 0.00 4.04
538 854 1.407721 CGCATTGCAACATTGGCTCG 61.408 55.000 0.00 0.00 0.00 5.03
539 855 0.109179 TCGCATTGCAACATTGGCTC 60.109 50.000 0.00 0.00 0.00 4.70
540 856 0.108992 CTCGCATTGCAACATTGGCT 60.109 50.000 0.00 0.00 0.00 4.75
541 857 0.109179 TCTCGCATTGCAACATTGGC 60.109 50.000 0.00 0.00 0.00 4.52
542 858 1.468565 CCTCTCGCATTGCAACATTGG 60.469 52.381 0.00 0.00 0.00 3.16
543 859 1.200716 ACCTCTCGCATTGCAACATTG 59.799 47.619 0.00 0.00 0.00 2.82
544 860 1.200716 CACCTCTCGCATTGCAACATT 59.799 47.619 0.00 0.00 0.00 2.71
545 861 0.806868 CACCTCTCGCATTGCAACAT 59.193 50.000 0.00 0.00 0.00 2.71
556 872 2.885861 CGTTCCCCTCACCTCTCG 59.114 66.667 0.00 0.00 0.00 4.04
557 873 1.985116 AGCGTTCCCCTCACCTCTC 60.985 63.158 0.00 0.00 0.00 3.20
562 878 2.266055 CTCCAGCGTTCCCCTCAC 59.734 66.667 0.00 0.00 0.00 3.51
563 879 3.706373 GCTCCAGCGTTCCCCTCA 61.706 66.667 0.00 0.00 0.00 3.86
569 885 1.696832 CTTAAGCGGCTCCAGCGTTC 61.697 60.000 1.45 0.00 43.26 3.95
573 889 3.205536 GCCTTAAGCGGCTCCAGC 61.206 66.667 1.45 0.33 46.63 4.85
586 902 1.453155 CTCGCATTGTACAAGGCCTT 58.547 50.000 32.47 13.78 44.32 4.35
587 903 0.392998 CCTCGCATTGTACAAGGCCT 60.393 55.000 32.47 0.00 44.32 5.19
588 904 0.392461 TCCTCGCATTGTACAAGGCC 60.392 55.000 32.47 18.54 44.32 5.19
589 905 1.009829 CTCCTCGCATTGTACAAGGC 58.990 55.000 30.11 30.11 43.80 4.35
590 906 1.009829 GCTCCTCGCATTGTACAAGG 58.990 55.000 15.70 15.70 38.92 3.61
591 907 0.647410 CGCTCCTCGCATTGTACAAG 59.353 55.000 14.65 7.46 39.08 3.16
592 908 0.739462 CCGCTCCTCGCATTGTACAA 60.739 55.000 11.41 11.41 39.08 2.41
593 909 1.153647 CCGCTCCTCGCATTGTACA 60.154 57.895 0.00 0.00 39.08 2.90
594 910 0.101759 TACCGCTCCTCGCATTGTAC 59.898 55.000 0.00 0.00 39.08 2.90
595 911 0.101759 GTACCGCTCCTCGCATTGTA 59.898 55.000 0.00 0.00 39.08 2.41
596 912 1.153628 GTACCGCTCCTCGCATTGT 60.154 57.895 0.00 0.00 39.08 2.71
597 913 0.460284 AAGTACCGCTCCTCGCATTG 60.460 55.000 0.00 0.00 39.08 2.82
598 914 1.108776 TAAGTACCGCTCCTCGCATT 58.891 50.000 0.00 0.00 39.08 3.56
599 915 1.067212 CTTAAGTACCGCTCCTCGCAT 59.933 52.381 0.00 0.00 39.08 4.73
600 916 0.454600 CTTAAGTACCGCTCCTCGCA 59.545 55.000 0.00 0.00 39.08 5.10
601 917 0.248949 CCTTAAGTACCGCTCCTCGC 60.249 60.000 0.97 0.00 36.73 5.03
602 918 1.386533 TCCTTAAGTACCGCTCCTCG 58.613 55.000 0.97 0.00 38.08 4.63
603 919 3.195182 ACTTTCCTTAAGTACCGCTCCTC 59.805 47.826 0.97 0.00 45.22 3.71
604 920 3.171528 ACTTTCCTTAAGTACCGCTCCT 58.828 45.455 0.97 0.00 45.22 3.69
605 921 3.606595 ACTTTCCTTAAGTACCGCTCC 57.393 47.619 0.97 0.00 45.22 4.70
606 922 4.992951 TCAAACTTTCCTTAAGTACCGCTC 59.007 41.667 0.97 0.00 46.34 5.03
607 923 4.964593 TCAAACTTTCCTTAAGTACCGCT 58.035 39.130 0.97 0.00 46.34 5.52
608 924 5.874895 ATCAAACTTTCCTTAAGTACCGC 57.125 39.130 0.97 0.00 46.34 5.68
626 942 9.685276 TGGAAGATGCTTAGAGAAATAAATCAA 57.315 29.630 0.00 0.00 0.00 2.57
627 943 9.857656 ATGGAAGATGCTTAGAGAAATAAATCA 57.142 29.630 0.00 0.00 0.00 2.57
635 951 9.770097 CTTGTATAATGGAAGATGCTTAGAGAA 57.230 33.333 0.00 0.00 0.00 2.87
636 952 8.370940 CCTTGTATAATGGAAGATGCTTAGAGA 58.629 37.037 0.00 0.00 0.00 3.10
637 953 7.118971 GCCTTGTATAATGGAAGATGCTTAGAG 59.881 40.741 0.00 0.00 0.00 2.43
638 954 6.936900 GCCTTGTATAATGGAAGATGCTTAGA 59.063 38.462 0.00 0.00 0.00 2.10
639 955 6.150140 GGCCTTGTATAATGGAAGATGCTTAG 59.850 42.308 0.00 0.00 0.00 2.18
640 956 6.003950 GGCCTTGTATAATGGAAGATGCTTA 58.996 40.000 0.00 0.00 0.00 3.09
641 957 4.829492 GGCCTTGTATAATGGAAGATGCTT 59.171 41.667 0.00 0.00 0.00 3.91
642 958 4.105377 AGGCCTTGTATAATGGAAGATGCT 59.895 41.667 0.00 0.00 0.00 3.79
643 959 4.401925 AGGCCTTGTATAATGGAAGATGC 58.598 43.478 0.00 0.00 0.00 3.91
644 960 8.048534 CATTAGGCCTTGTATAATGGAAGATG 57.951 38.462 12.58 0.00 34.64 2.90
651 967 6.209192 TGCAATCCATTAGGCCTTGTATAATG 59.791 38.462 12.58 14.55 36.89 1.90
652 968 6.314120 TGCAATCCATTAGGCCTTGTATAAT 58.686 36.000 12.58 0.00 32.81 1.28
653 969 5.700183 TGCAATCCATTAGGCCTTGTATAA 58.300 37.500 12.58 0.00 32.81 0.98
654 970 5.317600 TGCAATCCATTAGGCCTTGTATA 57.682 39.130 12.58 0.00 32.81 1.47
655 971 4.183223 TGCAATCCATTAGGCCTTGTAT 57.817 40.909 12.58 0.00 32.81 2.29
656 972 3.660970 TGCAATCCATTAGGCCTTGTA 57.339 42.857 12.58 0.00 32.81 2.41
657 973 2.530460 TGCAATCCATTAGGCCTTGT 57.470 45.000 12.58 0.00 32.81 3.16
658 974 3.133362 ACATTGCAATCCATTAGGCCTTG 59.867 43.478 12.58 3.33 33.15 3.61
659 975 3.377573 ACATTGCAATCCATTAGGCCTT 58.622 40.909 12.58 0.00 33.74 4.35
660 976 2.961062 GACATTGCAATCCATTAGGCCT 59.039 45.455 11.78 11.78 33.74 5.19
661 977 2.287788 CGACATTGCAATCCATTAGGCC 60.288 50.000 9.53 0.00 33.74 5.19
662 978 2.358898 ACGACATTGCAATCCATTAGGC 59.641 45.455 9.53 0.00 33.74 3.93
663 979 4.637483 AACGACATTGCAATCCATTAGG 57.363 40.909 9.53 0.00 0.00 2.69
664 980 7.195646 ACATAAACGACATTGCAATCCATTAG 58.804 34.615 9.53 0.00 0.00 1.73
665 981 7.094508 ACATAAACGACATTGCAATCCATTA 57.905 32.000 9.53 5.68 0.00 1.90
666 982 5.964758 ACATAAACGACATTGCAATCCATT 58.035 33.333 9.53 3.62 0.00 3.16
674 990 8.276060 TGTTTTAGAAACATAAACGACATTGC 57.724 30.769 2.34 0.00 35.16 3.56
678 994 8.231837 GCCTATGTTTTAGAAACATAAACGACA 58.768 33.333 20.40 5.64 41.10 4.35
682 998 8.846607 CAACGCCTATGTTTTAGAAACATAAAC 58.153 33.333 20.40 15.68 41.10 2.01
685 1001 7.675962 ACAACGCCTATGTTTTAGAAACATA 57.324 32.000 19.41 19.41 40.87 2.29
727 1047 2.758207 TTGCCCTCCCGTCAAACCA 61.758 57.895 0.00 0.00 0.00 3.67
732 1052 2.429930 CTTGTTGCCCTCCCGTCA 59.570 61.111 0.00 0.00 0.00 4.35
776 1096 0.594796 CTTTGCAACAAGGCACGTCC 60.595 55.000 0.00 0.00 44.86 4.79
777 1097 0.594796 CCTTTGCAACAAGGCACGTC 60.595 55.000 0.00 0.00 44.86 4.34
781 1101 1.114722 CCCTCCTTTGCAACAAGGCA 61.115 55.000 11.71 1.85 43.19 4.75
782 1102 1.667722 CCCTCCTTTGCAACAAGGC 59.332 57.895 11.71 0.00 36.15 4.35
802 1122 1.511887 CGATTTTTCGCACGGCAGG 60.512 57.895 0.00 0.00 0.00 4.85
820 1143 4.549516 GCTCTACGCGTCGGGTCC 62.550 72.222 18.63 0.00 0.00 4.46
825 1148 4.253257 GGGGAGCTCTACGCGTCG 62.253 72.222 18.63 10.61 45.59 5.12
835 1158 2.774809 GGAACTCAGAATTAGGGGAGCT 59.225 50.000 0.00 0.00 0.00 4.09
853 1177 1.867363 GGCAGAGTAAGGGAGAGGAA 58.133 55.000 0.00 0.00 0.00 3.36
854 1178 0.395862 CGGCAGAGTAAGGGAGAGGA 60.396 60.000 0.00 0.00 0.00 3.71
865 1569 2.093973 CAGAATTGTAGTCCGGCAGAGT 60.094 50.000 0.00 0.00 0.00 3.24
898 1602 0.463833 GAAGTGAAGCCCCCATACGG 60.464 60.000 0.00 0.00 0.00 4.02
899 1603 0.463833 GGAAGTGAAGCCCCCATACG 60.464 60.000 0.00 0.00 0.00 3.06
900 1604 0.463833 CGGAAGTGAAGCCCCCATAC 60.464 60.000 0.00 0.00 0.00 2.39
901 1605 0.619255 TCGGAAGTGAAGCCCCCATA 60.619 55.000 0.00 0.00 0.00 2.74
902 1606 1.497309 TTCGGAAGTGAAGCCCCCAT 61.497 55.000 0.00 0.00 0.00 4.00
903 1607 1.497309 ATTCGGAAGTGAAGCCCCCA 61.497 55.000 0.00 0.00 0.00 4.96
904 1608 0.748367 GATTCGGAAGTGAAGCCCCC 60.748 60.000 0.00 0.00 0.00 5.40
927 1631 1.153329 GAGACGAGAGAGAGCCGGA 60.153 63.158 5.05 0.00 0.00 5.14
981 1685 2.703409 CTCGGTATGTGCTTGCGC 59.297 61.111 0.00 0.00 0.00 6.09
1032 1736 1.962321 GCGGAGAAGGGAAGGGTCTC 61.962 65.000 0.00 0.00 37.63 3.36
1074 1778 3.012560 GCCATGGCCATGTCTAGTC 57.987 57.895 37.30 18.50 37.11 2.59
1605 2340 1.634702 GTCCTCGTCGTAGTCGTAGT 58.365 55.000 0.00 0.00 40.43 2.73
1618 2353 2.800581 CTCGTCCTCGTCGTCCTCG 61.801 68.421 0.00 0.00 38.33 4.63
1706 2456 4.778415 CAGCAGGGACGACGACGG 62.778 72.222 12.58 0.00 44.46 4.79
1709 2459 4.056125 CAGCAGCAGGGACGACGA 62.056 66.667 0.00 0.00 0.00 4.20
2031 2817 2.124011 TCACGAACCACACGAGTAAC 57.876 50.000 0.00 0.00 34.70 2.50
2032 2818 2.544277 CCTTCACGAACCACACGAGTAA 60.544 50.000 0.00 0.00 34.70 2.24
2033 2819 1.001048 CCTTCACGAACCACACGAGTA 60.001 52.381 0.00 0.00 34.70 2.59
2034 2820 0.249322 CCTTCACGAACCACACGAGT 60.249 55.000 0.00 0.00 34.70 4.18
2037 2823 2.604174 GCCCTTCACGAACCACACG 61.604 63.158 0.00 0.00 0.00 4.49
2042 2828 1.162698 GGTTTAGCCCTTCACGAACC 58.837 55.000 0.00 0.00 0.00 3.62
2064 2850 7.224753 AGGTTTATACAGACATACAAATCGCAG 59.775 37.037 0.00 0.00 0.00 5.18
2084 2870 7.836685 TCAATGGATGGCTACAAAATAGGTTTA 59.163 33.333 0.00 0.00 0.00 2.01
2085 2871 6.667414 TCAATGGATGGCTACAAAATAGGTTT 59.333 34.615 0.00 0.00 0.00 3.27
2146 2932 1.168407 CGGCCATGGTAAGATGCAGG 61.168 60.000 14.67 0.00 0.00 4.85
2161 2947 1.664151 CGTTCCTGATTTACTTCGGCC 59.336 52.381 0.00 0.00 0.00 6.13
2172 2958 7.348080 TCTTGACTAACATATCGTTCCTGAT 57.652 36.000 0.00 0.00 39.14 2.90
2173 2959 6.769134 TCTTGACTAACATATCGTTCCTGA 57.231 37.500 0.00 0.00 39.14 3.86
2174 2960 9.133627 CATATCTTGACTAACATATCGTTCCTG 57.866 37.037 0.00 0.00 39.14 3.86
2175 2961 8.861086 ACATATCTTGACTAACATATCGTTCCT 58.139 33.333 0.00 0.00 39.14 3.36
2176 2962 9.477484 AACATATCTTGACTAACATATCGTTCC 57.523 33.333 0.00 0.00 39.14 3.62
2213 2999 5.359860 AGATCAACATCATCACATGCATGTT 59.640 36.000 29.48 14.02 39.39 2.71
2215 3001 5.215160 CAGATCAACATCATCACATGCATG 58.785 41.667 25.09 25.09 0.00 4.06
2217 3003 4.266714 ACAGATCAACATCATCACATGCA 58.733 39.130 0.00 0.00 0.00 3.96
2276 3063 4.987285 CCAGATGTATGCTAGTGTCATCAC 59.013 45.833 15.70 0.00 44.15 3.06
2335 3131 3.887335 TTCACGCCGGTGTAAGCCC 62.887 63.158 22.46 0.00 44.68 5.19
2343 3139 0.820074 TGAAAATGGTTCACGCCGGT 60.820 50.000 1.90 0.00 0.00 5.28
2385 3182 3.758554 GCCATCTTTTGTACCTGATGTGT 59.241 43.478 0.00 0.00 35.76 3.72
2416 3318 3.569194 TTTCTGGTGCCTTCTTGTGTA 57.431 42.857 0.00 0.00 0.00 2.90
2434 3357 2.548480 GGCTGCTTGTCGTAACTCTTTT 59.452 45.455 0.00 0.00 0.00 2.27
2441 3364 0.941542 GTGTTGGCTGCTTGTCGTAA 59.058 50.000 0.00 0.00 0.00 3.18
2741 3665 5.070685 GTGTGTGGGGATTCTACTTTCTTT 58.929 41.667 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.