>input_sequence_61106
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-----------------------AAACTCGTGAACGAACACCTCCACCGCGGCCCGAGACCCTTCCCTTCTCCGCAGTCC
GCCCGTGCAATCGCAGCGACTAGACATGGCCATGGCCATGGCCGCCGTGAAGGAGCACGTCCTGCTCAGCCAGCCCGACA
AGCAGGTCCTGCTCGCCGAGATCCCGGCCTCAGGCTCGCGCGAT---------CCGCAGCCGACGGTCACGCTCCGGCTG
CTCGTCGAGCTGTGCAGCGACTACGGCGCCGGCCCCGCGGACGTCGACACGATGGAGGACGTGGCCTGCCGCGTGCCGCT
CGCCGACCTGGGCCGCCAGGGAGCGGCCGACCGGGCGTTCAAGGCGCTGGTGG-------CCCGGATCGACAACCCGGCG
CTGCGCCCGGAGGTCGCGGCGGAGACCGCGGCGGCCGCGGCGCGCGTCCGGGCGAGGTGCGTGACCGACGACCGCGACGG
GCTCCGCGGCGTCGAGTTCCGCCTCCGCGTCGTGTTCGTCGACGAC---GCGTCC---------GAGGAGGAGGAGGAGG
C---GGACGACGACGAGTGCGGGAGCGACATGGAGTTCGGGGAGTTCGACCTGAGCGGCGCGCGGAGCCTACGCGGCCAG
CAGACCGACGCCGGCTACGACTACGACTACGACGAGGACGACGAGGAC------GAGGACGGCTGCGGCGCCCAGTTCAC
GGTGCGCCCGTACCGCGGCGCCCCCACGC---------GAGGGGGAGGAGGGGCGCCGTCGTCGTCCCTGCTGCTGTCTG
GCTTCGAGGCGCGCTCCGACGGGCCCGAGCTCACGGAGGAGCACGAGGTGACGTCGTACGACATACAGCGCGTCGTGCGC
ATGGCGCTG---------GGCGGCGGGAGCGTGGAGGACGACGAGGCCTACCGGCGCGCGCTGGACGGCGGCGCGCCCGT
GTCGCCGGCGTCGCGCGCCGCCATGGTCGGCCGGGCGCTGCAGTCCGCGAG------GCAGCAGCAGCAGCGGTCGAAGT
CGCCACGCCCAATCTTCCCGATGCGTACCGGATTCTGATGCGCGCCCGATTGGATTG---------------------GA
TTGCAAACCTCTCGACGTTACTCGTGTGGTTCGTGAAGGGCTAAACCTGCTGCGATTTGTATGTCTGTATAAA-------
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------------------------------------
>chr4A_1_TraesCS4A01G249500
GAAATAGGGAATATACTACTGTTCCATTCAAATACAGAATCTGTTCATTCACCACACTATCCGAGCTGAACGTGATGTTC
CATCACATTTCCCAGTTCAGCTCTTGTTCATTTAACACAAACGGGATTTAGTTTGGCAAACTTGTTTTTTGTAGAGAAAA
CTCATTTTCTTTTTCTTCACGAAGGAATAGCTCATTGATTCATGTTGTCCAGTTAAATGCTTGTTGAATATAGTG--CTG
GTTCGCTCTGTGGTTCAACGTGTGATTGTGTGAGTTAATTTTTATGGAAACGCTTGGGTTCA---CCCGACTGGTTTCAG
TAAGAAATCTGCAAATTCTGCAC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ACGACCACCCAATCCGTAGGTGTTGGAATTGGCAAGCCAATGTTGTTGTGAGGCGCGGCAACTTCTA
AGAGAGCGACGACCACCAGATCTGTAGGTGTTGCAATTGGGATTTGATGGCTTGCAACGTCGATGATGTTTCTGAAACAC
AATCAATGTTGCAACGTGTGAGGCGAGGGGAGCTGCTTAATGGATTGCAAGGTCGAGCCAATGTTGCAATGCGAGAGGTG
AGGGGAACGCTGGAGCCGCTTAAGGCCTTGTACAATGCGAGGAGCGGTACTTAAGGAAAGTTTGATTTATTTCTCTAAGC
ATCTTCCATTATACAAGGCCTAATGGATTGCAATGTCGTTTATGTTTCTAAA-ACATAGGCGTTGTTTCAAAAGGAAAAA
AAA---TGGTTTGACGGGAGGGCAACAAGGCTTGTGTTGCAAAGCACCAGGCGCAGGACGTGCCTTGTTGCAAAGGAGGG
CCCTGCCGTGCGAAAAAT---CGGACCCGACGCGTAGAGCTCCCCT-AATTCTGAGTTC---------------------
--------------------------------------------------------------------------------
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---------------------------------------CTCTCCCTTACTCTGCCGGACTACAATTCTGATTCGGTATG
GCCGTATGGGGGCTTCACTTCCGAATCGAGTCCGGCTCTCTCTCGTCTCAATCGCACCTTCCTGCTATAAAAGGAGCCCC
AGACGCGCAAGCACATACCGAGCAAACTCGTGAACGAACACCTCCACCGCGGCCCGAGACCCTTCCCTTCTCCGCAGTCC
GCCCGTGCAATCGCAGCGACTAGACATGGCCATGGCCATGGCCGCCGTGAAGGAGCACGTCCTGCTCAGCCAGCCCGACA
AGCAGGTCCTGCTCGCCGAGATCCCGGCCTCAGGCTCGCGCGAT---------CCGCAGCCGACGGTCACGCTCCGGCTG
CTCGTCGAGCTGTGCAGCGACTACGGCGCCGGCCCCGCGGACGTCGACACGATGGAGGACGTGGCCTGCCGCGTGCCGCT
CGCCGACCTGGGCCGCCAGGGAGCGGCCGACCGGGCGTTCAAGGCGCTGGTGG-------CCCGGATCGACAACCCGGCG
CTGCGCCCGGAGGTCGCGGCGGAGACCGCGGCGGCCGCGGCGCGCGTCCGGGCGAGGTGCGTGACCGACGACCGCGACGG
GCTCCGCGGCGTCGAGTTCCGCCTCCGCGTCGTGTTCGTCGACGAC---GCGTCC---------GAGGAGGAGGAGGAGG
C---GGACGACGACGAGTGCGGGAGCGACATGGAGTTCGGGGAGTTCGACCTGAGCGGCGCGCGGAGCCTACGCGGCCAG
CAGACCGACGCCGGCTACGACTACGACTACGACGAGGACGACGAGGAC------GAGGACGGCTGCGGCGCCCAGTTCAC
GGTGCGCCCGTACCGCGGCGCCCCCACGC---------GAGGGGGAGGAGGGGCGCCGTCGTCGTCCCTGCTGCTGTCTG
GCTTCGAGGCGCGCTCCGACGGGCCCGAGCTCACGGAGGAGCACGAGGTGACGTCGTACGACATACAGCGCGTCGTGCGC
ATGGCGCTG---------GGCGGCGGGAGCGTGGAGGACGACGAGGCCTACCGGCGCGCGCTGGACGGCGGCGCGCCCGT
GTCGCCGGCGTCGCGCGCCGCCATGGTCGGCCGGGCGCTGCAGTCCGCGAG------GCAGCAGCAGCAGCGGTCGAAGT
CGCCACGCCCAATCTTCCCGATGCGTACCGGATTCTGATGCGCGCCCGATTGGATTG---------------------GA
TTGCAAACCTCTCGACGTTACTCGTGTGGTTCGTGAAGGGCTAAACCTGCTGCGATTTGTATGTCTGTATAAACCTATTT
TGTAGCCATCCATTGAAGTTCGATTCATTTCTTCTTGGTAGAAAATATGCACCTGCATCTTACCATGGCCGAAGTAAATC
AGGAACGATATGTTAGTCAAGATATGTTGATCTCTTGCAACATGCATGTGATGATGTTGATCTGTTATCAAAATCATAAG
AATTTGTTTCCCC-TTTCTCTGGTGATGACACTAGCAT---------ACATCTGGCAAGAATGTGAAGATTTTTTTGACA
GTGCTACGGCGGGCTTACACCGGCGTGAACCATTTTCA-TTATAAATAAGAGTAAGATACAACACATCAG----------
--------------------------------------------------------------------------------
---------------GTACAAAAGATGGCATCCAACATACACAAGAAGGCAC---------------------CAGAAAA
GAGTTACGACAAGCAGCCAACACCAAGAATGTGATGGATTG-ATTGCATTGCTGAATTCCTCTGCATTGCAGAACTGTTG
GGTATACAATTTGTAATGTAATATAAATACATGGAGGGGATAAATGTGGCATGTCGATGCATGCTTTTGTTAGTTTTGTT
GCCTTATACATCATTTCTAAAGTCAGGAAATATCTGACAGAAACCTATGTCTCAATTTATATACACTTGTCAAGAATCAG
CCATGCTGTCGCCTTCGGTCGCTGGGCGCAGTTCTGGTTTCTGTTCTTGTTCCGGACTCCTGATAAAGAAAGTAGAATCC
CCACACAC---AAAAAGGGAAAAAGATCAAGAAAGTTAGATAAT---ACATAGTTGGTGTTTTGAGAGACCTCTCCTAAG
CCATGAGGTTTCCCATTTAAACCCTGACATGAGGAGCTTTTAAAATATAGCTGCT------------------AGACAGC
GATTTGAGATGCAGTAGAGTCTGCAAAGAAGGTGTGCTTACATCCCAGAGTCCATTTTGACCGTGGTATGATTAGGCTCA
GCACAAACAATTGCTTTGTCATCATCCACACTGTCCTGTGTAGGAAGAAACACAAATAAAGTAAACATGAAATGTT-CAA
TTAAATAAGTTATATCATAGAACTAACGCACCATTT
>chr4D_1
GAAATAGGAAAGATACTACTGTTCCATGCAAATACAGAATCTGTTCATTCACCACACTATCCGAGCTCAACGTGATGTTC
CATCACATTTCCCAGTTCAGCTCTTATTCATTTAACACAAACTGAATTTAGTTTGGCGAACTTGTTTTTTGTAGAGAAAA
TTCATTTTCTAAGAAAC-----------AGCTCATTGGTTCATGTTGTCCAGTTGAATGCTTGTTGAAGATAGGGCTCTG
GTTCTATGTGTGGTTCAACGTGTGATTGTGTCAGTTAATTTTTACGGAAACGCTTGGGGTTCACCC--GGCTGATTTCTG
GGAGAAATTTGCCGCCGTGACGCTTGCCGTGGGGCCCAGAAACATTGCATTGCCCTCCCTCTAG--------------AC
ACTCATCTCATTCGTCCCATTTCTCCTTCCTCCATTG---ACCACTGCTGCCATCGAGCTACAGCCTCGCTCGCGCGATG
CAAAGAGGGGGGAACCAT-------------GGACTCTTTGCCTCCCGCATCGGGGCAGCTTGTGATGCGGCGGCGACAG
CCGGTGGTGGCTACTTGAAAGGAGGGATGCGGAGATCTGTGAGCTTGGTGAGACAGTGTTGTTGCGAGGCACACAACGAC
TGCTACGAGGATGACGGCCACCCAATTCATAGGTGTTGCAATTG------------------------------------
---------------------------------------GGATTTGATGGATTGCAATGTCGATGATGCTTCTGAAACAT
GGTCAG-------------------------------------------------------TGTTGCAATGAAAGAGACG
AGGGAAACACTGGAGCCGCTTG----------------------------------------------------------
----------------------ATGGATTACAACGTCCTTAATGTTTCTGAA-ACATAGGCCTTGTTTCAAAGG---AAA
AAAAAACGGTCCGACGGAGAGCGCAACAGGCTCATGTTGCAAAGCGCCAAGCGCAACACGATCCTTGTTGCAAAGGAGGG
CGGTGCCGTGGAGAG-AT---CAGACCGGACGTGTAGCGCTTCCCT-AATTATGAGAACACGTTAATACAACCAACGACG
AACCAACCAGTGTTTGGATGGTTAGAGGGACTGTGGTATCCCCAACCCACCAGGGTTCAAGTCCTCTGTTCGTAAATACT
TGTTGGA----------------------AAAATGAATAAAAATGAACGTATCTATAACTAAAATACATCTAAACATATC
TATTTTTTTAACAAGTATTTTCGGACGAG---------------------------------------------------
--------------------------------------------------------------------------------
-----GGAAGTACAACCAATGATGAGCGGCTGGATGATTCTCTCCCTTCCTCTGCCGGACTGCAATTCTGATTCGGTATT
--------GGGGCTTCACTTCCGAATCGAGCTCAGCTCTCTCTCGTCTCAATCGCACCTTCCTGCTATAAAAGGAGCACC
AGACCCGCAAGTACGTACCGTGCAAACTCGTGAAGGAACACGTCCACCGCGGCCCTAGACCCTGTTCTTTTCCGCAGCCC
GCCCGTGCACCCGCAGGCAGA---------------CATGGCCGCCGTGAAGGAGCACGTCCTGCTCAGCCAGCCGGACA
AGCAGGTCCTGCTCGCCGAGATCCCGGCTTCAGGCGCGCGCGAT---------CCGCAGCCGACGGTCACGCTCCGGCTG
CTCGTCGAGCTGTGCAACGACTACGGCGCCGGCCCCGTGGACGTCGACACGATGGAGGACGTGGCCTGCCGCGTGCCGCT
CGCCGACCTGGGCCGCCAGGGGGCGGCCGACCGGGCGTTCAAGGAGCTGGTGG-------CCCGGATCGACAACCCGGCG
CTGCGCCCGGAGGTCGCCGCGGAGACCGCGGCGGCCGCGGCGCGCGTCCGGGCGAGGTGCGGGGCCGACGACCGCGACGG
GCTCCGCGGCGTGGAGTTCCGCCTCCGCGTCGTGTTCATCGACGAC---GCGTCC---------GAGGAGGCGGAGG---
---AGGACGACGACGAGTGCGGGAGCGACATGGAGTTCGGGGAGTTCGATCTGAGCGGCGCGCGGAGCCTGCGCGGCCAG
CAGACCGACGCCGGCTACGGCTACGACTACGAGGAGGACGACGACGAT------GAAGACGGCTGCGGCGCCCAGTTCAC
TGTGCGCCCGTACCGCGGCGCCCTCGCGCGAGCGGGAGGAGGGG------------CGCCGTCGTCCCTGCTGCTGTCAG
GCTTCGAGGCGCGCTCCGACGGGCCCGAGCTCACGGAGGAGCACGAGATGACGTCGTACGACATACAGCGCGTCGTGCGC
AAGGCGCTGGGCGGCGGCGGCGGCGGGAGCGTGGAGGACGACGAGGCCTACCGGCGCGCGCTGGACGGCGGCACGCCCGT
GTCGCCGACATCGCGCGCCGCCATGGTCGGCCAGGCGCTGCAGTCCGCGAGGCAGCAGCAGCAGCAGCAGCGGTCGAAGT
CGCCACGCCCAATCTTCCCGATGCGTACCGGATTCTGATGCGCGCCCGATTGGATTGCAAACCTGTGATGTAAATGATGA
TTGCAAACT-----------CTTGTGTAGTTCGTGAAGGG------CTGTTGCGATTTGTATGTCTGTA--AACCTATTT
TGTAGCCATCCATTGAAGTTCGATTCATTTCTTCTTGGTAGAAAATATGCAGCTGCATCTTACAATAGCCGAAGTAA---
---------ATGTTAGTGAAGATGTGTTGATCTCTTGCGAGACGCATGTGATGATCTTGATCTGTTATCGAAATCATAAG
AATTTGTTTACCGTTTTCTCTGATGATGAGGCAAATCACTAGAATACACAACTGGCAAGAATGTGATGATG---------
--------------------------------------------------------------------------------
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----------------------------ATGTGATGGATTGCATTGCATTGCTGAATT-CTCTGCATTGCAGAACTGTTG
GGTATACAATTTGTAATGTAATATAAATACATGGAGGGGATAAATGTGGCATGTCGATGCATGCTTTTGTTAGTTTTGTT
GCCTTATACATCATTTCTAAAGTCAGGAAATATCTGACAAAAACCTATGTCTCAATTTATATACACTTGTCATGAATCAG
CCATGCTGTCGCCTTCGGTCGCTGGGCGCAGTTCTGGTTTCTGTTCTTGTTCCGGACTCCTGATCAAGAAAGTAGAATCC
CCACAT---AAAAAAAGGGAAAAAGATCAAGAAAGTTAAATAATGGTACATAGTTGGTGTTTTGAGAGATCTCTCCTGAG
CCATGAGGTTTCCCATTTAAACCCTGACATGAGGAGCTTTTAAAATATAGCTGCT------------------AGACAGC
GATTTGAGATGCAGTAGAGTCTGCAAAGAAGGTGTGCTTACATCCCAGAGTCCATTTTGACCGTGGTATGATTAGGCTCA
GCACAAACAATTGCTTTGTCATCATCCACACTCTCCTGTGTAGGAAGAAACACAAATAAAGTAAACATGAAATGTT-CAA
GCAAATAAGTTATATCATAGAACTAACGCACCATTT
>chr4B_1
GAACTAGGAAAGACACTAATGTTCCGCGCAAATACAGAATCTGTTCATTCACCACACTATCCGAGCTCAACGTGATGTTC
CATCACATTTCCCAGTTCAGCTCTTATTGACTTAACAGAAACGGAATTTAGTTTGGCGAACTTGTTTTTTGTAGAGAAAA
TTCATTTTCTAAGAAAC-----------AGCTCATTGGTTCATGTTGTCCAGTTGAATGCTTGTTGAAGATAGAGCTCTG
GTTCTATGTGTGGTTCAACGTGTGATTGCGTCAGTTAATTTTTACGGAAACGCTTGGGTTTCACCCCGGGCTGATTCCTG
GGAGAAATCTGCCGCCGCGC-----GCCGTGGGGCCCAGCAACATTGCTTTCCCCTTCCCTAGCATTGTCCTTCCTCTAC
ACTCATCTCATTCGTCCCATTTCTCCTTCCTCCACTGACCACCACTGCTGTCATCGAGCTACAGCCTCGGTCGCGCGATG
CAAAGAGGGGAGAACCATCGATCTCGCCCGAGGACTCTTTGCCTCCCACATCAGGGCAGCCTGTGGTTCGGCGGCGACAG
CCGGTGGTGG----------------------------------------------------------------------
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--------------------------ATTACAACGCCCTTCATGTTACTGAACACATAGGCCTTGTTTTAAAGG---AAA
AAA---CGGTTCGGCGGGAGCGCAACAAGGCTCGTGTTGCGCGCTTT-----GCAACACGAACCTTGTTGCAAAGGAGGG
CGCTCCCGTGGAGAGATTGGACTGACCGGACACGTAGTGCTCCCCAAAATTCTGAGAACACGTTAAGGACATCAACAGTG
TGTAGAGGCTGGGCTGCCTCTATCCTGGGCCCCACGTTCTGCCTCTAGTCAGATCTAAAAACCACGTGGTGTGTAGCAGG
CTGTTGACTCTAAGGAATGGTCCCACAATAGAATAAACAATGAAGAATGTATTGATCCGTTTGCATGGCCTAGCCACAGC
CATACACTGACTAGTAGGACCATGTCGTTGTTTAATCCTTGGAGGCAGCCTCCAAGGCTAGCATCGATGCCAAGCTTAAA
AAACTTGGAGGCAATGTCTGCAGTGTGTAGAGGCGGGCTCCAAGCCTTTAGAGGCGGCTATAGAGGCTGAAAACCACTAC
CTTGTGGATGCTCAACCAATGATGAACGGGTGGATAA---------TTCCTCTGCCGGACTACAATTCCGATTCGGTATT
--------GGGGCTTCAGTTCCGAATCGAGCCCGGCTCTCTCTCGTCTCAATCGCACCTTCCTGCTATAAAAGGAGCCCC
AGACCCGCAGACACATACCAAGCAAACTCGTGAAGGAACACGTCCACCGCGGCCCTAGACCCTTCTCTTCTCCGCAGTCC
GCCCGTGTAATCGCAGCAGCTAAGA-----CATGGCCATGGCCACCGTGAGGGAGCACGTCCTGCTCAGCCAGCCCGGCA
AGCAGGTCCTGCTCGCCGAGATCCCGGCGTCAGCCTCGCGCGAC---------TCGCAGCCGGCGGTCACGCTCCGGCTG
CTCGTTGAGCAGTGCAGCGACTACGGTGCCGGCCCCGCGGACGTCGACACGGTGGAGGACGTGGCCTGCCGCGTGCCGCT
CGCCGACCTGGTTCGCCAGGGGGCGGCGGAGCGGGCGTTCAAGGAGCTGGTGG-------CCCGGATCGACAACCCGGCG
CTGCGCCCGGAGGTCGCGGCGGAGACCGCGGCGGCCGCGGTGCGCGTCCGGGCGAGGTGCGGGGCCGACGACCGCGACGG
GCTCCGCGGCGTGGAGTTCCGCCTCCGCGTCACGTTCATCGACGAC---GCGTCCAGGGAAGAGGAGGAGGCGGACC---
---ACGACGACGACGAGTGCGGGAGCGACATGGAGTTCGGGGAGTTCGATCTGAGCGGCGCGCGGAGCCTGCGCGGCCAG
CAGACCGACGCCAGCTA------CGACTACGAGGAGGAGGACGACGAC------GAGGACGGCTGCGGCGCCCAGTTCAC
GGTGCGCCCCTACCGCGGCGCCCTCGCGC---------GAGGGG------------CGCCGTCGTCCATGCTGCTGTCTG
GCTTCGAGGCGCGCTCCGACGGGCCCGAGCTCACGGAGGAGCACGAGGTGACGTCGTACGACATACAGCGCGTCGTGCGC
AAGGCGCTG------GGCGGCGGCGGGAGCGTGGAGGACGACGAGGCATACCTGCGCGCGCTGGACGGCGGCACGCCCGT
GTCGCCGGCGTCGCGCGCCGCCATGGTCGGCCAGGCGCTGCAGTCCGCGAGGCAGCAGCAGCAGCAGCAGCGGTCGAAGT
CGCCACGCCCAATCTTCCCGATGCGTACCGGATTCTGATGCGCGCCCGATTGGATTGCAAACTTGTGATGTTACTCTTCT
--------------------------------GTGAAGGGCTAAACCTGTTGCGATTTGTATGTCTGTA--AGCCGATTT
TGTAGCCATCCATTGAAGTCCGTTTCATTTCTTCTTGGTAGAAAATATGCAGCTGCATCTTACCACAGCCGAAGTAA---
---------ATCAGGAAC----------------------------------------GATATGCTATCAAAATCATAAG
AATTTGTTTCCCC-TTTCTCTGATGATGACACTAGCAT---------ACATCTGGCAAGAATGTGATGATTTTTTTGACA
GTGCTAGAGCAGGCTTACGCCGGCCTGAACCATTTTCATTTATAAATAAGAGTAAGATACACCACATCAGGTACTCCCTC
CGTTCGGAATTACTTGTCTCGGAAATGGATGTATCTAGAACTAAAATACATCTAGATACATCCATTTTCGAGACAAGTAA
TTCTGAACGGAGGGAGTACAAAAGATGGCATCCAACACACACAAGAAGGCACAAGGAACAACATAAGGAGAACCAGTAAA
GAGCTACGACAAGCAGCCAACACCAAGAATGTGATGGATTG-ATTGCATTCCTGAATT-CTCTGCATTGCAGAACTGTTG
GGTATACAATGTGTAAATAT-----AATACATGGAGGGGATAAATGTGGCATGTCGATGCATGCTTGTGTTAGTTTTGTT
GCCTTATACATCATTTCTAAAGTCAGGAAATATCTGACAAAAACCTATGTTTC-ATTTATATACACTTGTCATGAATCAG
CCATGGTGTCGCCTTCAGTCGCCGGGCGCAGTTCTGGTTTCTGTTCTTGTTCCGGACTCCTGGTCAAGAAAGTAGAATCC
CCACACACAAAAAAAGGGGCAAAGGATCAAGAAAGTTAGATAATGGCACATAGTTGGTGTTCTGAGAGATCTCTCATAAG
CCATGAGGTTTCCCATTTAAACCCTGACATGAGGAGTTGAGGACCTTGTAAAATAGTATACTCCTAGCTGCTAAGACAGT
GATCTGAGATGCAGTAAAGAAGGCT---------TGCTTACATCTCAGAATCCATTTTGACTGCGGTATGATTACGCTCA
GCACACACAATTGCTTTGTCATCATCCACACTCTCCTGTGTAGGAAGAAATGCAAATAAACTAAACATGAAATGTTCCAA
TCAAACAAGTTATATCACAGACCTAACGCACCATTT
>chr1A_1077
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-------------------CTAGACATGGCCATGGCCA---CCGCCGTGAACGAGCACGTCCTGCTCAGCCATCCCGACA
AGCTGGTCCTGCTCGCCGAGATCCCGGCCGCAGACTCGTGCGGCTCGTCCTCGTCGCAGCCCGACGTCACCTTCCGGCTG
GTCGTCGAGCAATGCAGCGACTACGGCGGCGGCCCCGTGGACGTCGACACGATGGAGGACGTCTCCTGCCGCGTGCCGCT
CCGCGACCTGGGCCGCCGGGCCGCCGCGGACCGGCCGTTCGCGGGCCTCGTGG-------CCAGGCTCGACAACCCGATG
ATACGCCCGGAGGTCGCGACGGAGGCCCGGAGGGCCGCGGAGCGCGTCGGGGCGAGGCGCGGCGCGGCCGG------CGG
GCTCGCCGGCGTGGAGTTCCGCCTCCGCGTGGTGTTCGTCGACGACGGCGCGTCC---------GAGGAGCCGGCGGCGT
CGGACGAGGACGACGAGAGCGGGAGCGACATGGAGTTCGGGGAATTCGACCTGAGCGGCGCGCGGAGCCTGCACGGCCAG
CGGGCCGTCGCCGCGTAC------------------GAGGACGACGAC------GAGGACGGCTGCGGCGCCCAGTTCAC
GGTGCGCCCGTACCGCGC----------------------GGGGGAGGGGGCGAG-----------CCTGCTGCTGTCGG
GCTTCGAGGCGCGCTCGGACGGCCCCGAGCTGACCGAGCAGCACGAGCTGACGTCGCATGACATGCGCCGCCTCGTGCAC
CTGGCGCTG------GAAGGGGGCGCGAGCATGGAGGAGGACGAGGCCTACCAGCGATCGCTGGCCGGCGGCACGACCGT
GTCCCGGGCGTCGCGCGACGCCATGGTCGACCAGGCGCTGCAGTCCGCGAGC---CAGCAGCAGCAGCAGCGGTCCAAGT
CACCGAGCCCGATCTTTCCGATGCGTTCCGGATTCTGATGCCGGCCGGATTG----------------------------
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>chr1D_1111
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-----------------------------------------------------AGCACGTCCTGCTCAGCAATCCCGACA
AGCTGGTCCTGCTCGCCGAGATCCCGGCCGCAGACTCGTGCGGCTCGTCA------CAGCCCGACGTCACGTTCCGGCTG
CTCGTCGAGCAATGCTGCGACTACGGCGGCGGCCCCGTGGACGTGGACACGATGTAGGACGTGTCCTGCCGCGTGCCGCT
CCGCGACCTGGGACGCCGGGGCGCCGCGGACCGGGCGTTCGCGGGCCTCGTGGGTCGTGGCCAGGCTCGACAACCCGACG
CTGCGCCCGGAGGTCGCGGCGGAGGCCAGGAGGGCGGCGGAGCGCGTCGGGGCGAGGTGCGGCGCGGTCGG------CGG
GCTCGCCGGCGTCGAGTTCCGCCTCCGCGTGGTGTTCGTCGACGATGACGCGTCC---------GAGGAGCCGGCG----
------------------------GCGACATGGAGTTCGGGGAATTCGACCTGAGCAGCGCGCGGAGCCTGCACGGCCAG
CGGGCCGTCGCCGCGTAC------------------GAGGACGACGACGAGGATGAGGACGGCTGCGGCGCCCAGTTCAC
GGTGCGCCCGTACCGCGC----------------------GGGGGAGGGGGCGAG-----------CCTGCTGCTGTCGG
GCTTCGAGGCGCGCTCGGACGGCCCCGAGCTGACCCAGCAGCACGAGCTGACGTCGCATGACATGCGCCGCC--------
---GCGCTG------GAAGGGGGCGCGAGCATGGAGGACGATGAGGCCTACCAGCGAGCGCTGGCCGGCGGCACGGCCGT
GTCCCCGGCGTCGCGCGCCGCCATGGTCGACCAGGCGCTGTAGTCCGCGAGC------CAGCAGCAGCAGCGGTCCAAGT
CACCGAGCCCGATCTTTCCGATGCGTTCCGGATTCTGATGCCTGGCGGATTGGA--------------------------
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>SNPs
--------S--S---------------S---------------------------------------S------------
-------------------------S------------------S------------S----------------------
S---------SSSSSSSSSSSSSSSSSS---------S----------------S-------------S----S------
----SS-S-----------------------S------------S---------------SS-----S-S---S----S-
SS----------SSSSS-SS-S----------------------------------------------------------
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----------------S---------S-S---------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S------S----------S----------S
SS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------SS----SS-
----S---S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS-------S---S---S--S--------S-----------S----------S-SSS---
------S----S--------------------S------------S---S-----SS---SS------------------
-S--------SSS-S-------S----S---------S------------------SS----------------------
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------------------------------------------------S------------------------------S
SSSSSSSS----------------------S-------------------------------------------------
----S-----------------------------S------S-------------S---------S--------------
-----------------S--------------------------------------------------------------
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---------------------S----------------------S-----------------------------------
-------------------------------------------------------------S-S----------------
-----------------------------------------------------------------------S-----S-S
----------------------------------------------------------------------S---------
-------------------S------------S-----------S-----------------------------------
-----------------------S-S----------------------S--S-S-S--S---------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------SSSSSSSSSSSS--S----S---------------------S-------------------SS---------
---------------------------------------------------S--------------S----------SSS
SSSSSSSSS--------------S--------------S-S-S------------S------------------------
----------------------S-------------------------------------------S-------------
------SS--S-------S-----S------------------------------------S------------------
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-------------------------------------S--------------------------------------S---
---S------------------------------------------------------S---------------------
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---------------------------------------S--------------------------------S-------
----------------------------------------------------------------S---------------
---------------------------------------------------------------------S----------
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--------------------------------S-----------------------------------------------
-S----------------------------------
>forward_824
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----AATGTTGCAACGTGTGAGGC--------------------------------------------------------
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>reverse_2820
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-------------------ACTCGTGTGGTTCGTGAAGG-----------------------------------------
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>forward_872
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----------------------------------------------------TCGAGCCAATGTTGCAATGC--------
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>reverse_3139
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------------------ACCGGCGTGAACCATTTTCA------------------------------------------
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