Multiple sequence alignment - TraesCS4A01G235600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G235600 chr4A 100.000 5119 0 0 1 5119 544196932 544202050 0.000000e+00 9454.0
1 TraesCS4A01G235600 chr4A 97.600 125 2 1 2390 2514 658949231 658949108 4.010000e-51 213.0
2 TraesCS4A01G235600 chr4A 98.765 81 1 0 4807 4887 544201660 544201740 1.490000e-30 145.0
3 TraesCS4A01G235600 chr4A 98.765 81 1 0 4729 4809 544201738 544201818 1.490000e-30 145.0
4 TraesCS4A01G235600 chr4B 87.852 1951 96 65 529 2392 76820241 76818345 0.000000e+00 2159.0
5 TraesCS4A01G235600 chr4B 87.978 1805 124 40 2504 4249 76818348 76816578 0.000000e+00 2045.0
6 TraesCS4A01G235600 chr4B 89.960 498 46 4 1 497 76820801 76820307 1.550000e-179 640.0
7 TraesCS4A01G235600 chr4B 96.053 304 9 3 4817 5119 76815935 76815634 4.610000e-135 492.0
8 TraesCS4A01G235600 chr4B 86.275 255 13 2 4245 4498 76816538 76816305 1.830000e-64 257.0
9 TraesCS4A01G235600 chr4B 93.478 138 6 3 2381 2517 457415575 457415440 8.690000e-48 202.0
10 TraesCS4A01G235600 chr4B 87.597 129 9 3 4614 4737 76816188 76816062 5.340000e-30 143.0
11 TraesCS4A01G235600 chr4B 95.161 62 3 0 4565 4626 76816270 76816209 1.170000e-16 99.0
12 TraesCS4A01G235600 chr4D 90.387 1550 59 44 914 2392 52473687 52472157 0.000000e+00 1954.0
13 TraesCS4A01G235600 chr4D 87.601 1484 105 35 2504 3933 52472160 52470702 0.000000e+00 1648.0
14 TraesCS4A01G235600 chr4D 92.955 511 19 4 3984 4493 52470702 52470208 0.000000e+00 728.0
15 TraesCS4A01G235600 chr4D 89.225 529 41 6 1 527 52475074 52474560 0.000000e+00 647.0
16 TraesCS4A01G235600 chr4D 94.276 297 14 2 4823 5119 52469997 52469704 7.820000e-123 451.0
17 TraesCS4A01G235600 chr4D 87.172 343 23 10 579 919 52474315 52473992 2.250000e-98 370.0
18 TraesCS4A01G235600 chr2B 89.444 180 19 0 1867 2046 801162567 801162746 1.430000e-55 228.0
19 TraesCS4A01G235600 chr2B 94.074 135 6 2 2390 2523 751838723 751838590 2.420000e-48 204.0
20 TraesCS4A01G235600 chr2B 92.199 141 10 1 2382 2522 611059117 611059256 1.120000e-46 198.0
21 TraesCS4A01G235600 chr5B 89.444 180 15 3 1598 1775 582578443 582578620 1.850000e-54 224.0
22 TraesCS4A01G235600 chr5B 89.623 106 11 0 1942 2047 90507905 90508010 8.940000e-28 135.0
23 TraesCS4A01G235600 chr5B 93.827 81 5 0 1865 1945 90507723 90507803 6.960000e-24 122.0
24 TraesCS4A01G235600 chr5B 94.444 54 2 1 4138 4190 222724783 222724836 1.180000e-11 82.4
25 TraesCS4A01G235600 chr2D 88.889 180 20 0 1867 2046 640298895 640298716 6.670000e-54 222.0
26 TraesCS4A01G235600 chr5A 88.889 180 16 3 1598 1775 594571046 594571223 8.630000e-53 219.0
27 TraesCS4A01G235600 chr5A 89.623 106 11 0 1942 2047 78158178 78158283 8.940000e-28 135.0
28 TraesCS4A01G235600 chr5A 93.827 81 5 0 1865 1945 78157975 78158055 6.960000e-24 122.0
29 TraesCS4A01G235600 chrUn 99.160 119 1 0 2390 2508 87827393 87827511 1.120000e-51 215.0
30 TraesCS4A01G235600 chrUn 99.160 119 1 0 2390 2508 309972438 309972556 1.120000e-51 215.0
31 TraesCS4A01G235600 chr6B 97.600 125 3 0 2386 2510 36133877 36133753 1.120000e-51 215.0
32 TraesCS4A01G235600 chr5D 87.778 180 18 3 1598 1775 475302630 475302807 1.870000e-49 207.0
33 TraesCS4A01G235600 chr5D 89.623 106 11 0 1942 2047 82187575 82187680 8.940000e-28 135.0
34 TraesCS4A01G235600 chr5D 81.169 154 29 0 1 154 439750423 439750270 1.940000e-24 124.0
35 TraesCS4A01G235600 chr3B 95.420 131 5 1 2390 2520 454651972 454651843 1.870000e-49 207.0
36 TraesCS4A01G235600 chr3B 96.094 128 3 2 2390 2517 796312770 796312645 1.870000e-49 207.0
37 TraesCS4A01G235600 chr3B 92.593 81 6 0 1865 1945 650797563 650797643 3.240000e-22 117.0
38 TraesCS4A01G235600 chr1B 86.076 158 22 0 4 161 414082626 414082783 2.450000e-38 171.0
39 TraesCS4A01G235600 chr1A 85.714 161 23 0 1 161 385349454 385349614 2.450000e-38 171.0
40 TraesCS4A01G235600 chr7D 76.510 298 60 8 4820 5117 124301243 124300956 2.470000e-33 154.0
41 TraesCS4A01G235600 chr7D 81.169 154 29 0 1 154 59883101 59883254 1.940000e-24 124.0
42 TraesCS4A01G235600 chr7D 81.169 154 29 0 1 154 174177024 174176871 1.940000e-24 124.0
43 TraesCS4A01G235600 chr7D 80.519 154 30 0 1 154 174135472 174135319 9.000000e-23 119.0
44 TraesCS4A01G235600 chr7D 78.378 185 32 6 1864 2047 620992163 620991986 4.190000e-21 113.0
45 TraesCS4A01G235600 chr7A 76.510 298 60 8 4820 5117 126867716 126867429 2.470000e-33 154.0
46 TraesCS4A01G235600 chr7A 75.649 308 60 12 3254 3547 716240289 716240595 6.910000e-29 139.0
47 TraesCS4A01G235600 chr7A 79.891 184 31 4 1864 2047 716239289 716239466 4.160000e-26 130.0
48 TraesCS4A01G235600 chr7B 77.826 230 46 5 4888 5117 86142032 86141808 2.490000e-28 137.0
49 TraesCS4A01G235600 chr7B 74.441 313 61 13 3253 3547 719085800 719085489 3.240000e-22 117.0
50 TraesCS4A01G235600 chr1D 82.609 161 21 2 1 161 306666484 306666637 8.940000e-28 135.0
51 TraesCS4A01G235600 chr3D 92.593 81 6 0 1865 1945 487807613 487807693 3.240000e-22 117.0
52 TraesCS4A01G235600 chr3A 92.593 81 6 0 1865 1945 631575995 631576075 3.240000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G235600 chr4A 544196932 544202050 5118 False 3248.000000 9454 99.176667 1 5119 3 chr4A.!!$F1 5118
1 TraesCS4A01G235600 chr4B 76815634 76820801 5167 True 833.571429 2159 90.125143 1 5119 7 chr4B.!!$R2 5118
2 TraesCS4A01G235600 chr4D 52469704 52475074 5370 True 966.333333 1954 90.269333 1 5119 6 chr4D.!!$R1 5118

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
796 1037 0.250727 ACACACCCACAGCGCTAAAT 60.251 50.0 10.99 0.0 0.00 1.40 F
2408 3062 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.0 5.23 0.0 44.66 2.17 F
2411 3065 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.0 44.66 2.12 F
2505 3159 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.0 13.64 0.0 46.06 2.59 F
2509 3163 0.179009 CCGGACGGAGGGAGTACATA 60.179 60.0 4.40 0.0 37.50 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2392 3046 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 R
3426 4148 0.039326 ATCCTCTGGCAAAGCAAGCT 59.961 50.000 0.00 0.00 28.00 3.74 R
3793 4532 0.246635 ACTGGTTGATCCGAGAACCG 59.753 55.000 7.87 5.88 44.04 4.44 R
3982 4721 2.158505 CGGTACCCTATCCCTTCTGAGA 60.159 54.545 6.25 0.00 0.00 3.27 R
4330 5123 3.118482 AGTGCATATCTCAACACCTGGAG 60.118 47.826 0.00 0.00 33.46 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 5.382618 AGAGAAAACAAGGCAAGCAATAG 57.617 39.130 0.00 0.00 0.00 1.73
96 97 7.890127 AGAGGTGAATATTCCAACAAGAAATCA 59.110 33.333 12.90 0.00 0.00 2.57
154 155 2.430694 GCCCCTGTCCCATTAAATTCAC 59.569 50.000 0.00 0.00 0.00 3.18
177 178 5.758784 ACACTCATCATCAATACATGAGCTG 59.241 40.000 0.00 8.03 45.10 4.24
184 185 6.888105 TCATCAATACATGAGCTGGTCTTAA 58.112 36.000 8.47 0.00 42.53 1.85
193 194 4.517285 TGAGCTGGTCTTAAAGGCATTAG 58.483 43.478 8.47 0.00 0.00 1.73
203 204 3.386932 AAAGGCATTAGCAGGGATCAA 57.613 42.857 0.00 0.00 44.61 2.57
204 205 3.607490 AAGGCATTAGCAGGGATCAAT 57.393 42.857 0.00 0.00 44.61 2.57
271 272 4.033990 TCTTGGAATTGTCGATCTCTCG 57.966 45.455 0.00 0.00 46.41 4.04
280 281 3.017442 TGTCGATCTCTCGGAACAAGAT 58.983 45.455 0.00 0.00 45.10 2.40
285 286 1.751351 TCTCTCGGAACAAGATGCGAT 59.249 47.619 0.00 0.00 42.31 4.58
286 287 1.857217 CTCTCGGAACAAGATGCGATG 59.143 52.381 0.00 0.00 42.31 3.84
293 294 3.938963 GGAACAAGATGCGATGGAGTTTA 59.061 43.478 0.00 0.00 0.00 2.01
299 300 6.375455 ACAAGATGCGATGGAGTTTAAGATTT 59.625 34.615 0.00 0.00 0.00 2.17
333 335 2.032799 TCACACGCAACTTCCAAATGAC 59.967 45.455 0.00 0.00 0.00 3.06
376 378 9.846248 AGTGTTTCATTAAAATCAATAGAGCAC 57.154 29.630 0.00 0.00 0.00 4.40
393 395 5.724328 AGAGCACGAGTCTGAATAAATTGA 58.276 37.500 0.00 0.00 0.00 2.57
400 402 9.746711 CACGAGTCTGAATAAATTGAAGTTTAG 57.253 33.333 0.00 0.00 0.00 1.85
548 595 6.737720 AAAGAAAAGAAAAAGGAGGCTGAT 57.262 33.333 0.00 0.00 0.00 2.90
551 598 7.459795 AGAAAAGAAAAAGGAGGCTGATAAG 57.540 36.000 0.00 0.00 0.00 1.73
552 599 5.651387 AAAGAAAAAGGAGGCTGATAAGC 57.349 39.130 0.00 0.00 0.00 3.09
557 604 1.059006 AGGAGGCTGATAAGCAGGGG 61.059 60.000 3.95 0.00 45.03 4.79
558 605 1.056700 GGAGGCTGATAAGCAGGGGA 61.057 60.000 3.95 0.00 45.03 4.81
559 606 1.063183 GAGGCTGATAAGCAGGGGAT 58.937 55.000 3.95 0.00 45.03 3.85
560 607 1.423161 GAGGCTGATAAGCAGGGGATT 59.577 52.381 3.95 0.00 45.03 3.01
622 862 2.420628 TTACGAACACGTCCGAACAT 57.579 45.000 8.27 0.00 40.72 2.71
623 863 3.550950 TTACGAACACGTCCGAACATA 57.449 42.857 8.27 0.00 40.72 2.29
632 872 6.542574 ACACGTCCGAACATAAACATTTTA 57.457 33.333 0.00 0.00 0.00 1.52
633 873 7.136289 ACACGTCCGAACATAAACATTTTAT 57.864 32.000 0.00 0.00 0.00 1.40
634 874 8.254178 ACACGTCCGAACATAAACATTTTATA 57.746 30.769 0.00 0.00 0.00 0.98
635 875 8.719648 ACACGTCCGAACATAAACATTTTATAA 58.280 29.630 0.00 0.00 0.00 0.98
684 925 3.582998 TTTGGATTGGAGATGCCCTAG 57.417 47.619 0.00 0.00 34.97 3.02
718 959 1.816224 CCAAACCGACCCAACCTAATG 59.184 52.381 0.00 0.00 0.00 1.90
763 1004 1.880340 GATCAACTCGAGCCGCTGG 60.880 63.158 13.61 0.00 0.00 4.85
781 1022 1.234821 GGTGCCGAAATGAGAACACA 58.765 50.000 0.00 0.00 0.00 3.72
788 1029 2.224079 CGAAATGAGAACACACCCACAG 59.776 50.000 0.00 0.00 0.00 3.66
789 1030 1.609208 AATGAGAACACACCCACAGC 58.391 50.000 0.00 0.00 0.00 4.40
793 1034 1.301401 GAACACACCCACAGCGCTA 60.301 57.895 10.99 0.00 0.00 4.26
796 1037 0.250727 ACACACCCACAGCGCTAAAT 60.251 50.000 10.99 0.00 0.00 1.40
815 1056 4.814294 AATCGGAGCCGTCCACGC 62.814 66.667 8.96 0.00 44.18 5.34
886 1127 2.029290 GCTCAACTAACCGACCTGAAGA 60.029 50.000 0.00 0.00 0.00 2.87
890 1133 4.100498 TCAACTAACCGACCTGAAGAAGTT 59.900 41.667 0.00 0.00 0.00 2.66
978 1542 4.217159 CACCCTACGCCTACGCCC 62.217 72.222 0.00 0.00 45.53 6.13
979 1543 4.764771 ACCCTACGCCTACGCCCA 62.765 66.667 0.00 0.00 45.53 5.36
980 1544 4.217159 CCCTACGCCTACGCCCAC 62.217 72.222 0.00 0.00 45.53 4.61
981 1545 4.564116 CCTACGCCTACGCCCACG 62.564 72.222 0.00 0.00 45.53 4.94
1106 1670 4.760047 CGCCCTCCCGTGACAAGG 62.760 72.222 0.00 0.00 0.00 3.61
1173 1741 3.541713 GGCTGGGCTAGGAGGACG 61.542 72.222 0.00 0.00 0.00 4.79
1245 1816 3.191836 CGAAGCAGAGCGGAGAGA 58.808 61.111 0.00 0.00 0.00 3.10
1246 1817 1.508545 CGAAGCAGAGCGGAGAGAA 59.491 57.895 0.00 0.00 0.00 2.87
1250 1821 2.777832 AGCAGAGCGGAGAGAAAAAT 57.222 45.000 0.00 0.00 0.00 1.82
1253 1824 4.775236 AGCAGAGCGGAGAGAAAAATATT 58.225 39.130 0.00 0.00 0.00 1.28
1324 1901 3.991773 AGCGCGGCGATTTTATTAATAGA 59.008 39.130 28.54 0.00 0.00 1.98
1344 1924 2.336400 GAAATAAAGGCTGCCGGCGG 62.336 60.000 31.57 31.57 42.94 6.13
1431 2027 1.000896 CAATCCAGTCCACCACCCC 60.001 63.158 0.00 0.00 0.00 4.95
1432 2028 2.602676 AATCCAGTCCACCACCCCG 61.603 63.158 0.00 0.00 0.00 5.73
1473 2076 6.650120 TCATCAGCTAACTAAACTAAAGGGG 58.350 40.000 0.00 0.00 0.00 4.79
1485 2088 1.636003 CTAAAGGGGAGAAGGCAAGGT 59.364 52.381 0.00 0.00 0.00 3.50
1486 2089 0.113190 AAAGGGGAGAAGGCAAGGTG 59.887 55.000 0.00 0.00 0.00 4.00
1488 2091 1.303643 GGGGAGAAGGCAAGGTGTG 60.304 63.158 0.00 0.00 0.00 3.82
1490 2093 0.890996 GGGAGAAGGCAAGGTGTGTG 60.891 60.000 0.00 0.00 0.00 3.82
1491 2094 0.179018 GGAGAAGGCAAGGTGTGTGT 60.179 55.000 0.00 0.00 0.00 3.72
1492 2095 0.947244 GAGAAGGCAAGGTGTGTGTG 59.053 55.000 0.00 0.00 0.00 3.82
1499 2102 1.202580 GCAAGGTGTGTGTGTCTCTCT 60.203 52.381 0.00 0.00 0.00 3.10
1777 2395 0.396001 AGCGAGGGGAGAAGGTACTC 60.396 60.000 0.00 0.00 38.49 2.59
1794 2415 7.373617 AGGTACTCCTACTACTTCTACTACC 57.626 44.000 0.00 0.00 43.12 3.18
1803 2424 4.817464 ACTACTTCTACTACCAGAGCATCG 59.183 45.833 0.00 0.00 42.67 3.84
1814 2435 2.115595 CAGAGCATCGCTAGTTCTTCG 58.884 52.381 0.00 0.00 39.88 3.79
1818 2439 2.113289 GCATCGCTAGTTCTTCGTCTC 58.887 52.381 0.00 0.00 0.00 3.36
1824 2445 0.809385 TAGTTCTTCGTCTCCCTGCG 59.191 55.000 0.00 0.00 0.00 5.18
2056 2677 3.458163 GACGAGGTCCGCCCATCA 61.458 66.667 0.00 0.00 43.32 3.07
2057 2678 3.718210 GACGAGGTCCGCCCATCAC 62.718 68.421 0.00 0.00 43.32 3.06
2062 2687 4.176752 GTCCGCCCATCACCCTCC 62.177 72.222 0.00 0.00 0.00 4.30
2072 2697 0.624795 ATCACCCTCCCCCTTCCTTC 60.625 60.000 0.00 0.00 0.00 3.46
2114 2764 5.499935 CGTTTCTCATACGTGGACTACTAG 58.500 45.833 0.00 0.00 34.47 2.57
2120 2770 4.748600 TCATACGTGGACTACTAGTGATCG 59.251 45.833 5.39 4.66 0.00 3.69
2121 2771 3.257469 ACGTGGACTACTAGTGATCGA 57.743 47.619 5.39 0.00 0.00 3.59
2123 2773 3.808726 ACGTGGACTACTAGTGATCGATC 59.191 47.826 18.72 18.72 0.00 3.69
2231 2884 2.082231 GGTACTCTTTCCTTTTCGGGC 58.918 52.381 0.00 0.00 0.00 6.13
2244 2897 0.250553 TTCGGGCGATTCCACAGTTT 60.251 50.000 0.00 0.00 36.21 2.66
2271 2924 2.790468 GCTGTTACGGTAGCTACGACTG 60.790 54.545 17.48 15.79 36.99 3.51
2330 2984 1.795286 GACTTGAAGCTGGAGAACACG 59.205 52.381 0.00 0.00 0.00 4.49
2395 3049 2.124411 TGGCTATTCCAAGGTACTCCC 58.876 52.381 0.00 0.00 43.21 4.30
2397 3051 2.369203 GGCTATTCCAAGGTACTCCCTC 59.631 54.545 0.00 0.00 45.47 4.30
2398 3052 2.369203 GCTATTCCAAGGTACTCCCTCC 59.631 54.545 0.00 0.00 45.47 4.30
2399 3053 1.497161 ATTCCAAGGTACTCCCTCCG 58.503 55.000 0.00 0.00 45.47 4.63
2400 3054 0.115745 TTCCAAGGTACTCCCTCCGT 59.884 55.000 0.00 0.00 45.47 4.69
2401 3055 0.324091 TCCAAGGTACTCCCTCCGTC 60.324 60.000 0.00 0.00 45.47 4.79
2402 3056 1.328430 CCAAGGTACTCCCTCCGTCC 61.328 65.000 0.00 0.00 45.47 4.79
2403 3057 1.379576 AAGGTACTCCCTCCGTCCG 60.380 63.158 0.00 0.00 45.47 4.79
2404 3058 2.832201 GGTACTCCCTCCGTCCGG 60.832 72.222 0.00 0.00 0.00 5.14
2405 3059 2.273449 GTACTCCCTCCGTCCGGA 59.727 66.667 0.00 0.00 42.90 5.14
2406 3060 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
2407 3061 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
2408 3062 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2409 3063 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2410 3064 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2411 3065 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2412 3066 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2413 3067 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2414 3068 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2415 3069 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2416 3070 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
2417 3071 1.135315 CCGTCCGGAAATACTTGTCGA 60.135 52.381 5.23 0.00 37.50 4.20
2418 3072 2.598589 CGTCCGGAAATACTTGTCGAA 58.401 47.619 5.23 0.00 0.00 3.71
2419 3073 2.597305 CGTCCGGAAATACTTGTCGAAG 59.403 50.000 5.23 0.00 35.07 3.79
2420 3074 3.671433 CGTCCGGAAATACTTGTCGAAGA 60.671 47.826 5.23 0.00 32.98 2.87
2421 3075 4.240096 GTCCGGAAATACTTGTCGAAGAA 58.760 43.478 5.23 0.00 39.69 2.52
2422 3076 4.687483 GTCCGGAAATACTTGTCGAAGAAA 59.313 41.667 5.23 0.00 39.69 2.52
2423 3077 5.350640 GTCCGGAAATACTTGTCGAAGAAAT 59.649 40.000 5.23 0.00 39.69 2.17
2424 3078 5.350365 TCCGGAAATACTTGTCGAAGAAATG 59.650 40.000 0.00 0.00 39.69 2.32
2425 3079 5.022021 CGGAAATACTTGTCGAAGAAATGC 58.978 41.667 0.00 0.00 39.69 3.56
2426 3080 5.390461 CGGAAATACTTGTCGAAGAAATGCA 60.390 40.000 0.00 0.00 39.69 3.96
2427 3081 6.555315 GGAAATACTTGTCGAAGAAATGCAT 58.445 36.000 0.00 0.00 39.69 3.96
2428 3082 7.465379 CGGAAATACTTGTCGAAGAAATGCATA 60.465 37.037 0.00 0.00 39.69 3.14
2429 3083 8.181573 GGAAATACTTGTCGAAGAAATGCATAA 58.818 33.333 0.00 0.00 39.69 1.90
2430 3084 9.554724 GAAATACTTGTCGAAGAAATGCATAAA 57.445 29.630 0.00 0.00 39.69 1.40
2431 3085 9.906660 AAATACTTGTCGAAGAAATGCATAAAA 57.093 25.926 0.00 0.00 39.69 1.52
2432 3086 9.906660 AATACTTGTCGAAGAAATGCATAAAAA 57.093 25.926 0.00 0.00 39.69 1.94
2434 3088 8.231304 ACTTGTCGAAGAAATGCATAAAAATG 57.769 30.769 0.00 0.00 39.69 2.32
2435 3089 7.329226 ACTTGTCGAAGAAATGCATAAAAATGG 59.671 33.333 0.00 0.00 39.69 3.16
2436 3090 6.918626 TGTCGAAGAAATGCATAAAAATGGA 58.081 32.000 0.00 0.00 39.69 3.41
2437 3091 7.546358 TGTCGAAGAAATGCATAAAAATGGAT 58.454 30.769 0.00 0.00 39.69 3.41
2438 3092 7.488792 TGTCGAAGAAATGCATAAAAATGGATG 59.511 33.333 0.00 0.00 39.69 3.51
2439 3093 7.489113 GTCGAAGAAATGCATAAAAATGGATGT 59.511 33.333 0.00 0.00 39.69 3.06
2440 3094 8.681806 TCGAAGAAATGCATAAAAATGGATGTA 58.318 29.630 0.00 0.00 32.82 2.29
2441 3095 9.467258 CGAAGAAATGCATAAAAATGGATGTAT 57.533 29.630 0.00 0.00 32.82 2.29
2476 3130 8.423906 AAATACGTCTAGATACATCCATTCCT 57.576 34.615 0.00 0.00 0.00 3.36
2477 3131 5.968528 ACGTCTAGATACATCCATTCCTC 57.031 43.478 0.00 0.00 0.00 3.71
2478 3132 4.767928 ACGTCTAGATACATCCATTCCTCC 59.232 45.833 0.00 0.00 0.00 4.30
2479 3133 4.142578 CGTCTAGATACATCCATTCCTCCG 60.143 50.000 0.00 0.00 0.00 4.63
2480 3134 5.010933 GTCTAGATACATCCATTCCTCCGA 58.989 45.833 0.00 0.00 0.00 4.55
2481 3135 5.010933 TCTAGATACATCCATTCCTCCGAC 58.989 45.833 0.00 0.00 0.00 4.79
2482 3136 3.576861 AGATACATCCATTCCTCCGACA 58.423 45.455 0.00 0.00 0.00 4.35
2483 3137 3.967326 AGATACATCCATTCCTCCGACAA 59.033 43.478 0.00 0.00 0.00 3.18
2484 3138 2.698855 ACATCCATTCCTCCGACAAG 57.301 50.000 0.00 0.00 0.00 3.16
2485 3139 1.909302 ACATCCATTCCTCCGACAAGT 59.091 47.619 0.00 0.00 0.00 3.16
2486 3140 3.104512 ACATCCATTCCTCCGACAAGTA 58.895 45.455 0.00 0.00 0.00 2.24
2487 3141 3.711704 ACATCCATTCCTCCGACAAGTAT 59.288 43.478 0.00 0.00 0.00 2.12
2488 3142 4.164221 ACATCCATTCCTCCGACAAGTATT 59.836 41.667 0.00 0.00 0.00 1.89
2489 3143 4.837093 TCCATTCCTCCGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
2490 3144 4.766375 TCCATTCCTCCGACAAGTATTTC 58.234 43.478 0.00 0.00 0.00 2.17
2491 3145 3.877508 CCATTCCTCCGACAAGTATTTCC 59.122 47.826 0.00 0.00 0.00 3.13
2492 3146 2.953466 TCCTCCGACAAGTATTTCCG 57.047 50.000 0.00 0.00 0.00 4.30
2493 3147 1.479323 TCCTCCGACAAGTATTTCCGG 59.521 52.381 0.00 0.00 41.36 5.14
2494 3148 1.479323 CCTCCGACAAGTATTTCCGGA 59.521 52.381 0.00 0.00 45.74 5.14
2495 3149 2.537401 CTCCGACAAGTATTTCCGGAC 58.463 52.381 1.83 0.00 43.47 4.79
2496 3150 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
2497 3151 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
2498 3152 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
2499 3153 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
2500 3154 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2501 3155 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2502 3156 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2503 3157 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2504 3158 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
2505 3159 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2506 3160 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
2507 3161 2.044650 CCGGACGGAGGGAGTACA 60.045 66.667 4.40 0.00 37.50 2.90
2508 3162 1.455217 CCGGACGGAGGGAGTACAT 60.455 63.158 4.40 0.00 37.50 2.29
2509 3163 0.179009 CCGGACGGAGGGAGTACATA 60.179 60.000 4.40 0.00 37.50 2.29
2544 3201 1.321743 GATACTTGCTTCACTGTCGCG 59.678 52.381 0.00 0.00 0.00 5.87
2545 3202 1.282248 TACTTGCTTCACTGTCGCGC 61.282 55.000 0.00 0.00 0.00 6.86
2566 3223 3.801293 GCAGGCTTTCAGTTTTCAGCAAT 60.801 43.478 0.00 0.00 33.64 3.56
2574 3231 7.148853 GCTTTCAGTTTTCAGCAATCAACATAG 60.149 37.037 0.00 0.00 32.17 2.23
2576 3233 7.977789 TCAGTTTTCAGCAATCAACATAGTA 57.022 32.000 0.00 0.00 0.00 1.82
2578 3235 9.013229 TCAGTTTTCAGCAATCAACATAGTATT 57.987 29.630 0.00 0.00 0.00 1.89
2579 3236 9.630098 CAGTTTTCAGCAATCAACATAGTATTT 57.370 29.630 0.00 0.00 0.00 1.40
2597 3254 7.849804 AGTATTTACTCTGTTTACATGCCAG 57.150 36.000 0.00 0.00 0.00 4.85
2599 3256 8.100791 AGTATTTACTCTGTTTACATGCCAGAA 58.899 33.333 0.00 0.00 34.99 3.02
2620 3277 1.387295 GGGGGTTATGCTCTGCTTGC 61.387 60.000 0.00 0.00 0.00 4.01
2629 3286 0.179936 GCTCTGCTTGCCATCCTAGT 59.820 55.000 0.00 0.00 0.00 2.57
2630 3287 1.414181 GCTCTGCTTGCCATCCTAGTA 59.586 52.381 0.00 0.00 0.00 1.82
2631 3288 2.547642 GCTCTGCTTGCCATCCTAGTAG 60.548 54.545 0.00 0.00 32.15 2.57
2632 3289 2.697751 CTCTGCTTGCCATCCTAGTAGT 59.302 50.000 0.00 0.00 32.59 2.73
2666 3323 7.443575 GTCCTAGTGTATCGACCTGTTATTCTA 59.556 40.741 0.00 0.00 0.00 2.10
2673 3330 8.350722 TGTATCGACCTGTTATTCTACTCATTC 58.649 37.037 0.00 0.00 0.00 2.67
2674 3331 6.145338 TCGACCTGTTATTCTACTCATTCC 57.855 41.667 0.00 0.00 0.00 3.01
2676 3333 6.039493 TCGACCTGTTATTCTACTCATTCCTC 59.961 42.308 0.00 0.00 0.00 3.71
2677 3334 6.183360 CGACCTGTTATTCTACTCATTCCTCA 60.183 42.308 0.00 0.00 0.00 3.86
2680 3337 8.207545 ACCTGTTATTCTACTCATTCCTCATTC 58.792 37.037 0.00 0.00 0.00 2.67
2681 3338 7.659390 CCTGTTATTCTACTCATTCCTCATTCC 59.341 40.741 0.00 0.00 0.00 3.01
2682 3339 8.324191 TGTTATTCTACTCATTCCTCATTCCT 57.676 34.615 0.00 0.00 0.00 3.36
2683 3340 8.206867 TGTTATTCTACTCATTCCTCATTCCTG 58.793 37.037 0.00 0.00 0.00 3.86
2685 3342 6.627087 TTCTACTCATTCCTCATTCCTGTT 57.373 37.500 0.00 0.00 0.00 3.16
2687 3344 6.644347 TCTACTCATTCCTCATTCCTGTTTC 58.356 40.000 0.00 0.00 0.00 2.78
2688 3345 4.256920 ACTCATTCCTCATTCCTGTTTCG 58.743 43.478 0.00 0.00 0.00 3.46
2720 3377 0.787787 CGTCGGTTCTTCATTCGCAA 59.212 50.000 0.00 0.00 0.00 4.85
2732 3389 4.335082 TCATTCGCAACCAAAATCTACG 57.665 40.909 0.00 0.00 0.00 3.51
2853 3510 5.694674 TTGAAAATTTCGCATATTTCGGC 57.305 34.783 0.97 0.00 35.15 5.54
2859 3516 4.783667 GCATATTTCGGCGGGGTA 57.216 55.556 7.21 0.00 0.00 3.69
2860 3517 3.243128 GCATATTTCGGCGGGGTAT 57.757 52.632 7.21 0.00 0.00 2.73
2889 3546 5.990668 ACTTATAGCCCTGAAATTTCGAGT 58.009 37.500 13.34 3.91 0.00 4.18
2893 3550 1.740025 GCCCTGAAATTTCGAGTCCAG 59.260 52.381 13.34 4.74 0.00 3.86
2903 3560 8.625651 TGAAATTTCGAGTCCAGTTCAAATTAA 58.374 29.630 13.34 0.00 0.00 1.40
2973 3660 5.173131 GCCAAATAATTTCTGAAATACGCGG 59.827 40.000 15.45 12.93 0.00 6.46
2979 3666 8.782533 ATAATTTCTGAAATACGCGGAATTTC 57.217 30.769 28.24 28.24 41.60 2.17
2987 3674 6.309251 TGAAATACGCGGAATTTCCAAAATTC 59.691 34.615 30.07 14.04 40.89 2.17
3041 3733 5.654650 TGTTTCTGAAACTAAAGGCCTTGAA 59.345 36.000 27.75 12.52 41.90 2.69
3054 3746 3.571401 AGGCCTTGAAGCATACATATTGC 59.429 43.478 0.00 0.00 40.45 3.56
3065 3764 4.696877 GCATACATATTGCTGCTCCATGTA 59.303 41.667 16.94 16.94 36.73 2.29
3160 3868 7.605410 ATTTGCATTGTGAAGATTTCCATTC 57.395 32.000 0.00 0.00 0.00 2.67
3180 3888 6.369615 CCATTCGTGAGATGCATGATGTATAA 59.630 38.462 2.46 0.00 41.91 0.98
3210 3931 4.024725 GGTACTACTAGACTCTGCGATGTG 60.025 50.000 0.00 0.00 0.00 3.21
3221 3942 1.326852 CTGCGATGTGTCATCTCAAGC 59.673 52.381 7.89 4.84 0.00 4.01
3227 3948 3.599730 TGTGTCATCTCAAGCTACCTG 57.400 47.619 0.00 0.00 0.00 4.00
3245 3966 2.359900 CTGCCGCTAATCCTTTGTTCT 58.640 47.619 0.00 0.00 0.00 3.01
3289 4010 1.006102 GTGGTCCTGTGGAGTGACG 60.006 63.158 0.00 0.00 29.39 4.35
3292 4013 1.080434 GTCCTGTGGAGTGACGCTC 60.080 63.158 7.52 7.52 43.39 5.03
3376 4097 5.003096 AGACAATTCAGGTTCCCATTCTT 57.997 39.130 0.00 0.00 0.00 2.52
3377 4098 6.139679 AGACAATTCAGGTTCCCATTCTTA 57.860 37.500 0.00 0.00 0.00 2.10
3378 4099 6.735556 AGACAATTCAGGTTCCCATTCTTAT 58.264 36.000 0.00 0.00 0.00 1.73
3382 4103 5.975988 TTCAGGTTCCCATTCTTATAGCT 57.024 39.130 0.00 0.00 0.00 3.32
3411 4133 4.797800 TCTCTTGACCATCTCTGTTCTG 57.202 45.455 0.00 0.00 0.00 3.02
3412 4134 4.411013 TCTCTTGACCATCTCTGTTCTGA 58.589 43.478 0.00 0.00 0.00 3.27
3414 4136 5.126869 TCTCTTGACCATCTCTGTTCTGATC 59.873 44.000 0.00 0.00 0.00 2.92
3415 4137 4.774200 TCTTGACCATCTCTGTTCTGATCA 59.226 41.667 0.00 0.00 0.00 2.92
3416 4138 4.462508 TGACCATCTCTGTTCTGATCAC 57.537 45.455 0.00 0.00 0.00 3.06
3417 4139 3.834231 TGACCATCTCTGTTCTGATCACA 59.166 43.478 0.00 0.00 0.00 3.58
3421 4143 5.221803 ACCATCTCTGTTCTGATCACAAACT 60.222 40.000 14.28 0.00 0.00 2.66
3422 4144 6.014242 ACCATCTCTGTTCTGATCACAAACTA 60.014 38.462 14.28 5.36 0.00 2.24
3424 4146 7.551974 CCATCTCTGTTCTGATCACAAACTAAT 59.448 37.037 14.28 4.04 0.00 1.73
3425 4147 7.895975 TCTCTGTTCTGATCACAAACTAATG 57.104 36.000 14.28 5.77 0.00 1.90
3426 4148 7.670364 TCTCTGTTCTGATCACAAACTAATGA 58.330 34.615 14.28 8.46 0.00 2.57
3432 4161 5.122869 TCTGATCACAAACTAATGAGCTTGC 59.877 40.000 0.00 0.00 32.43 4.01
3470 4199 1.893137 AGTGTGCAGTACTCGATTCCA 59.107 47.619 0.00 0.00 0.00 3.53
3579 4308 6.904463 TCTACTAACCATGTAGTGTTGTCA 57.096 37.500 6.31 0.00 38.67 3.58
3580 4309 6.684686 TCTACTAACCATGTAGTGTTGTCAC 58.315 40.000 6.31 0.00 44.15 3.67
3592 4321 3.799035 GTGTTGTCACTAGATTGTTGCG 58.201 45.455 0.00 0.00 40.98 4.85
3593 4322 3.247648 GTGTTGTCACTAGATTGTTGCGT 59.752 43.478 0.00 0.00 40.98 5.24
3594 4323 3.247411 TGTTGTCACTAGATTGTTGCGTG 59.753 43.478 0.00 0.00 0.00 5.34
3595 4324 1.798223 TGTCACTAGATTGTTGCGTGC 59.202 47.619 0.00 0.00 0.00 5.34
3596 4325 1.798223 GTCACTAGATTGTTGCGTGCA 59.202 47.619 0.00 0.00 0.00 4.57
3597 4326 2.068519 TCACTAGATTGTTGCGTGCAG 58.931 47.619 0.00 0.00 0.00 4.41
3598 4327 1.800586 CACTAGATTGTTGCGTGCAGT 59.199 47.619 0.00 0.00 0.00 4.40
3599 4328 2.224079 CACTAGATTGTTGCGTGCAGTT 59.776 45.455 0.00 0.00 0.00 3.16
3600 4329 2.878406 ACTAGATTGTTGCGTGCAGTTT 59.122 40.909 0.00 0.00 0.00 2.66
3601 4330 4.062293 ACTAGATTGTTGCGTGCAGTTTA 58.938 39.130 0.00 0.00 0.00 2.01
3606 4335 6.442952 AGATTGTTGCGTGCAGTTTATTTTA 58.557 32.000 0.00 0.00 0.00 1.52
3616 4345 7.539366 GCGTGCAGTTTATTTTAAGGTTGATAA 59.461 33.333 0.00 0.00 0.00 1.75
3640 4379 3.726557 TTGCAGAGAATCACAATCCCT 57.273 42.857 0.00 0.00 37.82 4.20
3940 4679 0.674534 AAACCTCTCGACGAAGCAGT 59.325 50.000 0.00 0.00 0.00 4.40
3942 4681 0.241481 ACCTCTCGACGAAGCAGTTC 59.759 55.000 0.00 0.00 0.00 3.01
3971 4710 1.130561 GTTGACCGTAAGATGCCAAGC 59.869 52.381 0.00 0.00 43.02 4.01
3982 4721 1.407258 GATGCCAAGCTACTCGAGACT 59.593 52.381 21.68 10.46 0.00 3.24
4042 4788 4.438148 GCCCACAAATGTTACTTTGTTGT 58.562 39.130 9.14 0.00 44.76 3.32
4043 4789 5.593010 GCCCACAAATGTTACTTTGTTGTA 58.407 37.500 9.14 0.00 44.76 2.41
4044 4790 5.460748 GCCCACAAATGTTACTTTGTTGTAC 59.539 40.000 9.14 0.00 44.76 2.90
4186 4935 2.315925 ACCCGTGTCATCACATCATC 57.684 50.000 0.00 0.00 44.02 2.92
4232 4981 4.508662 AGGCAAATAAGAGACACTACAGC 58.491 43.478 0.00 0.00 0.00 4.40
4301 5094 2.813754 TCTGCATTGTGGTTCTTGCTAC 59.186 45.455 0.00 0.00 36.10 3.58
4330 5123 1.602377 GTATCCATTTACGTGCAGGGC 59.398 52.381 11.67 0.00 0.00 5.19
4354 5147 2.862536 CAGGTGTTGAGATATGCACTCG 59.137 50.000 0.00 0.00 37.22 4.18
4364 5157 5.301805 TGAGATATGCACTCGGTTCAGATAA 59.698 40.000 0.00 0.00 37.22 1.75
4365 5158 5.777802 AGATATGCACTCGGTTCAGATAAG 58.222 41.667 0.00 0.00 0.00 1.73
4369 5162 3.119459 TGCACTCGGTTCAGATAAGAGAC 60.119 47.826 0.00 0.00 33.53 3.36
4370 5163 3.129638 GCACTCGGTTCAGATAAGAGACT 59.870 47.826 0.00 0.00 33.53 3.24
4461 5255 5.669164 ACCTATTGAGAAGTTCAGGAGTC 57.331 43.478 12.00 0.00 37.07 3.36
4493 5287 5.710513 TGAACCATTGTGGAATCTTTCTG 57.289 39.130 2.45 0.00 40.96 3.02
4499 5293 5.335426 CCATTGTGGAATCTTTCTGTCTGTG 60.335 44.000 0.00 0.00 40.96 3.66
4500 5294 4.687901 TGTGGAATCTTTCTGTCTGTGA 57.312 40.909 0.00 0.00 0.00 3.58
4501 5295 5.034852 TGTGGAATCTTTCTGTCTGTGAA 57.965 39.130 0.00 0.00 0.00 3.18
4502 5296 5.436175 TGTGGAATCTTTCTGTCTGTGAAA 58.564 37.500 0.00 0.00 33.15 2.69
4503 5297 6.064060 TGTGGAATCTTTCTGTCTGTGAAAT 58.936 36.000 0.00 0.00 33.65 2.17
4507 5301 7.040892 TGGAATCTTTCTGTCTGTGAAATTCAG 60.041 37.037 0.00 0.00 33.65 3.02
4508 5302 6.814506 ATCTTTCTGTCTGTGAAATTCAGG 57.185 37.500 0.00 0.00 33.65 3.86
4509 5303 5.928976 TCTTTCTGTCTGTGAAATTCAGGA 58.071 37.500 0.00 0.00 33.65 3.86
4510 5304 5.994054 TCTTTCTGTCTGTGAAATTCAGGAG 59.006 40.000 0.00 0.00 33.65 3.69
4511 5305 4.963318 TCTGTCTGTGAAATTCAGGAGT 57.037 40.909 0.00 0.00 34.15 3.85
4513 5307 4.344968 TCTGTCTGTGAAATTCAGGAGTCA 59.655 41.667 0.00 0.00 34.15 3.41
4514 5308 5.034852 TGTCTGTGAAATTCAGGAGTCAA 57.965 39.130 0.00 0.00 34.15 3.18
4515 5309 5.624159 TGTCTGTGAAATTCAGGAGTCAAT 58.376 37.500 0.00 0.00 34.15 2.57
4516 5310 6.768483 TGTCTGTGAAATTCAGGAGTCAATA 58.232 36.000 0.00 0.00 34.15 1.90
4517 5311 6.650807 TGTCTGTGAAATTCAGGAGTCAATAC 59.349 38.462 0.00 0.00 34.15 1.89
4518 5312 6.876257 GTCTGTGAAATTCAGGAGTCAATACT 59.124 38.462 0.00 0.00 39.21 2.12
4529 5323 4.948608 GAGTCAATACTCGAGACACTCA 57.051 45.455 21.68 0.00 42.66 3.41
4530 5324 4.904116 GAGTCAATACTCGAGACACTCAG 58.096 47.826 21.68 2.17 42.66 3.35
4531 5325 4.580868 AGTCAATACTCGAGACACTCAGA 58.419 43.478 21.68 4.60 34.80 3.27
4532 5326 5.004448 AGTCAATACTCGAGACACTCAGAA 58.996 41.667 21.68 0.00 34.80 3.02
4533 5327 5.123186 AGTCAATACTCGAGACACTCAGAAG 59.877 44.000 21.68 0.00 34.80 2.85
4534 5328 4.396478 TCAATACTCGAGACACTCAGAAGG 59.604 45.833 21.68 0.00 0.00 3.46
4535 5329 1.540267 ACTCGAGACACTCAGAAGGG 58.460 55.000 21.68 0.00 0.00 3.95
4536 5330 1.074084 ACTCGAGACACTCAGAAGGGA 59.926 52.381 21.68 0.00 0.00 4.20
4537 5331 1.470890 CTCGAGACACTCAGAAGGGAC 59.529 57.143 6.58 0.00 0.00 4.46
4538 5332 1.202891 TCGAGACACTCAGAAGGGACA 60.203 52.381 0.00 0.00 0.00 4.02
4539 5333 1.201181 CGAGACACTCAGAAGGGACAG 59.799 57.143 0.00 0.00 0.00 3.51
4540 5334 1.548269 GAGACACTCAGAAGGGACAGG 59.452 57.143 0.00 0.00 0.00 4.00
4541 5335 0.610687 GACACTCAGAAGGGACAGGG 59.389 60.000 0.00 0.00 0.00 4.45
4542 5336 0.104934 ACACTCAGAAGGGACAGGGT 60.105 55.000 0.00 0.00 0.00 4.34
4543 5337 1.059913 CACTCAGAAGGGACAGGGTT 58.940 55.000 0.00 0.00 0.00 4.11
4544 5338 1.421646 CACTCAGAAGGGACAGGGTTT 59.578 52.381 0.00 0.00 0.00 3.27
4545 5339 2.637872 CACTCAGAAGGGACAGGGTTTA 59.362 50.000 0.00 0.00 0.00 2.01
4546 5340 3.072476 CACTCAGAAGGGACAGGGTTTAA 59.928 47.826 0.00 0.00 0.00 1.52
4547 5341 3.720002 ACTCAGAAGGGACAGGGTTTAAA 59.280 43.478 0.00 0.00 0.00 1.52
4548 5342 4.167307 ACTCAGAAGGGACAGGGTTTAAAA 59.833 41.667 0.00 0.00 0.00 1.52
4549 5343 5.162980 ACTCAGAAGGGACAGGGTTTAAAAT 60.163 40.000 0.00 0.00 0.00 1.82
4550 5344 5.711698 TCAGAAGGGACAGGGTTTAAAATT 58.288 37.500 0.00 0.00 0.00 1.82
4551 5345 6.140377 TCAGAAGGGACAGGGTTTAAAATTT 58.860 36.000 0.00 0.00 0.00 1.82
4552 5346 6.266786 TCAGAAGGGACAGGGTTTAAAATTTC 59.733 38.462 0.00 0.00 0.00 2.17
4553 5347 6.041523 CAGAAGGGACAGGGTTTAAAATTTCA 59.958 38.462 0.00 0.00 0.00 2.69
4554 5348 6.267699 AGAAGGGACAGGGTTTAAAATTTCAG 59.732 38.462 0.00 0.00 0.00 3.02
4555 5349 4.283467 AGGGACAGGGTTTAAAATTTCAGC 59.717 41.667 0.00 0.00 0.00 4.26
4556 5350 4.039852 GGGACAGGGTTTAAAATTTCAGCA 59.960 41.667 0.00 0.00 0.00 4.41
4557 5351 5.279960 GGGACAGGGTTTAAAATTTCAGCAT 60.280 40.000 0.00 0.00 0.00 3.79
4558 5352 6.071051 GGGACAGGGTTTAAAATTTCAGCATA 60.071 38.462 0.00 0.00 0.00 3.14
4559 5353 7.364673 GGGACAGGGTTTAAAATTTCAGCATAT 60.365 37.037 0.00 0.00 0.00 1.78
4560 5354 7.706607 GGACAGGGTTTAAAATTTCAGCATATC 59.293 37.037 0.00 0.00 0.00 1.63
4561 5355 7.257722 ACAGGGTTTAAAATTTCAGCATATCG 58.742 34.615 0.00 0.00 0.00 2.92
4562 5356 7.093945 ACAGGGTTTAAAATTTCAGCATATCGT 60.094 33.333 0.00 0.00 0.00 3.73
4563 5357 7.220683 CAGGGTTTAAAATTTCAGCATATCGTG 59.779 37.037 0.00 0.00 0.00 4.35
4570 5364 2.871182 TCAGCATATCGTGGACTGAC 57.129 50.000 0.00 0.00 32.65 3.51
4626 5420 0.603065 GCCTGATCAACCAAACCCAC 59.397 55.000 0.00 0.00 0.00 4.61
4627 5421 1.823250 GCCTGATCAACCAAACCCACT 60.823 52.381 0.00 0.00 0.00 4.00
4628 5422 2.162681 CCTGATCAACCAAACCCACTC 58.837 52.381 0.00 0.00 0.00 3.51
4629 5423 1.806542 CTGATCAACCAAACCCACTCG 59.193 52.381 0.00 0.00 0.00 4.18
4630 5424 1.142060 TGATCAACCAAACCCACTCGT 59.858 47.619 0.00 0.00 0.00 4.18
4631 5425 1.804748 GATCAACCAAACCCACTCGTC 59.195 52.381 0.00 0.00 0.00 4.20
4632 5426 0.834612 TCAACCAAACCCACTCGTCT 59.165 50.000 0.00 0.00 0.00 4.18
4754 5584 3.302968 GCATCGAGCAACTGAAAGC 57.697 52.632 0.00 0.00 44.79 3.51
4756 5586 1.727213 GCATCGAGCAACTGAAAGCAC 60.727 52.381 0.00 0.00 44.79 4.40
4757 5587 1.532437 CATCGAGCAACTGAAAGCACA 59.468 47.619 0.00 0.00 37.60 4.57
4758 5588 1.662517 TCGAGCAACTGAAAGCACAA 58.337 45.000 0.00 0.00 37.60 3.33
4759 5589 2.013400 TCGAGCAACTGAAAGCACAAA 58.987 42.857 0.00 0.00 37.60 2.83
4760 5590 2.421775 TCGAGCAACTGAAAGCACAAAA 59.578 40.909 0.00 0.00 37.60 2.44
4761 5591 2.531508 CGAGCAACTGAAAGCACAAAAC 59.468 45.455 0.00 0.00 37.60 2.43
4764 5594 2.860136 GCAACTGAAAGCACAAAACTCC 59.140 45.455 0.00 0.00 37.60 3.85
4765 5595 3.675775 GCAACTGAAAGCACAAAACTCCA 60.676 43.478 0.00 0.00 37.60 3.86
4766 5596 3.782889 ACTGAAAGCACAAAACTCCAC 57.217 42.857 0.00 0.00 37.60 4.02
4767 5597 3.088532 ACTGAAAGCACAAAACTCCACA 58.911 40.909 0.00 0.00 37.60 4.17
4768 5598 3.129287 ACTGAAAGCACAAAACTCCACAG 59.871 43.478 0.00 0.00 37.60 3.66
4769 5599 2.159254 TGAAAGCACAAAACTCCACAGC 60.159 45.455 0.00 0.00 0.00 4.40
4770 5600 1.473258 AAGCACAAAACTCCACAGCA 58.527 45.000 0.00 0.00 0.00 4.41
4771 5601 1.473258 AGCACAAAACTCCACAGCAA 58.527 45.000 0.00 0.00 0.00 3.91
4772 5602 2.034124 AGCACAAAACTCCACAGCAAT 58.966 42.857 0.00 0.00 0.00 3.56
4773 5603 2.035066 AGCACAAAACTCCACAGCAATC 59.965 45.455 0.00 0.00 0.00 2.67
4777 5607 1.915141 AAACTCCACAGCAATCCTGG 58.085 50.000 0.00 0.00 46.14 4.45
4780 5610 1.637553 ACTCCACAGCAATCCTGGATT 59.362 47.619 16.15 16.15 46.14 3.01
4781 5611 2.846206 ACTCCACAGCAATCCTGGATTA 59.154 45.455 20.95 3.82 46.14 1.75
4782 5612 3.461085 ACTCCACAGCAATCCTGGATTAT 59.539 43.478 20.95 10.57 46.14 1.28
4783 5613 4.079558 ACTCCACAGCAATCCTGGATTATT 60.080 41.667 20.95 9.88 46.14 1.40
4784 5614 4.209538 TCCACAGCAATCCTGGATTATTG 58.790 43.478 20.95 21.28 46.14 1.90
4786 5616 4.037208 CCACAGCAATCCTGGATTATTGTC 59.963 45.833 24.05 12.01 46.14 3.18
4787 5617 4.641541 CACAGCAATCCTGGATTATTGTCA 59.358 41.667 24.05 0.00 46.14 3.58
4788 5618 4.641989 ACAGCAATCCTGGATTATTGTCAC 59.358 41.667 20.95 5.89 46.14 3.67
4790 5620 6.057533 CAGCAATCCTGGATTATTGTCACTA 58.942 40.000 20.95 0.00 37.93 2.74
4791 5621 6.543465 CAGCAATCCTGGATTATTGTCACTAA 59.457 38.462 20.95 0.00 37.93 2.24
4792 5622 6.543831 AGCAATCCTGGATTATTGTCACTAAC 59.456 38.462 20.95 0.00 35.86 2.34
4793 5623 6.543831 GCAATCCTGGATTATTGTCACTAACT 59.456 38.462 20.95 0.00 35.86 2.24
4794 5624 7.254932 GCAATCCTGGATTATTGTCACTAACTC 60.255 40.741 20.95 0.00 35.86 3.01
4795 5625 6.867519 TCCTGGATTATTGTCACTAACTCA 57.132 37.500 0.00 0.00 0.00 3.41
4796 5626 6.640518 TCCTGGATTATTGTCACTAACTCAC 58.359 40.000 0.00 0.00 0.00 3.51
4799 5629 6.170506 TGGATTATTGTCACTAACTCACCAC 58.829 40.000 0.00 0.00 0.00 4.16
4800 5630 6.170506 GGATTATTGTCACTAACTCACCACA 58.829 40.000 0.00 0.00 0.00 4.17
4801 5631 6.653320 GGATTATTGTCACTAACTCACCACAA 59.347 38.462 0.00 0.00 0.00 3.33
4802 5632 6.854496 TTATTGTCACTAACTCACCACAAC 57.146 37.500 0.00 0.00 0.00 3.32
4803 5633 3.188159 TGTCACTAACTCACCACAACC 57.812 47.619 0.00 0.00 0.00 3.77
4804 5634 2.769663 TGTCACTAACTCACCACAACCT 59.230 45.455 0.00 0.00 0.00 3.50
4805 5635 3.181469 TGTCACTAACTCACCACAACCTC 60.181 47.826 0.00 0.00 0.00 3.85
4806 5636 2.367567 TCACTAACTCACCACAACCTCC 59.632 50.000 0.00 0.00 0.00 4.30
4807 5637 2.104111 CACTAACTCACCACAACCTCCA 59.896 50.000 0.00 0.00 0.00 3.86
4809 5639 2.568623 AACTCACCACAACCTCCATC 57.431 50.000 0.00 0.00 0.00 3.51
4810 5640 1.734655 ACTCACCACAACCTCCATCT 58.265 50.000 0.00 0.00 0.00 2.90
4811 5641 1.625818 ACTCACCACAACCTCCATCTC 59.374 52.381 0.00 0.00 0.00 2.75
4812 5642 1.625315 CTCACCACAACCTCCATCTCA 59.375 52.381 0.00 0.00 0.00 3.27
4813 5643 2.238144 CTCACCACAACCTCCATCTCAT 59.762 50.000 0.00 0.00 0.00 2.90
4814 5644 2.026915 TCACCACAACCTCCATCTCATG 60.027 50.000 0.00 0.00 0.00 3.07
4815 5645 1.340405 ACCACAACCTCCATCTCATGC 60.340 52.381 0.00 0.00 0.00 4.06
4965 5843 5.098211 GGCAGCATGATCTAAAGTTGAAAC 58.902 41.667 0.00 0.00 39.69 2.78
4985 5863 0.914644 CCCCTCCACTCACATGTGAT 59.085 55.000 28.00 15.52 40.12 3.06
5004 5882 3.264193 TGATAGTTGAGGTCACTGCCAAT 59.736 43.478 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 4.141287 TCTTTTCGAAGAAGCCAATTGGA 58.859 39.130 29.02 0.86 45.90 3.53
57 58 2.783135 TCACCTCTCACAAATCTTGCC 58.217 47.619 0.00 0.00 0.00 4.52
69 70 7.687941 TTTCTTGTTGGAATATTCACCTCTC 57.312 36.000 17.07 0.00 0.00 3.20
154 155 5.179555 CCAGCTCATGTATTGATGATGAGTG 59.820 44.000 0.00 0.00 43.38 3.51
177 178 2.952310 CCCTGCTAATGCCTTTAAGACC 59.048 50.000 0.00 0.00 38.71 3.85
184 185 3.607490 ATTGATCCCTGCTAATGCCTT 57.393 42.857 0.00 0.00 38.71 4.35
193 194 4.899352 ACATCCTAGTATTGATCCCTGC 57.101 45.455 0.00 0.00 0.00 4.85
203 204 4.362677 ACACCCTCACAACATCCTAGTAT 58.637 43.478 0.00 0.00 0.00 2.12
204 205 3.786553 ACACCCTCACAACATCCTAGTA 58.213 45.455 0.00 0.00 0.00 1.82
248 249 5.278512 CCGAGAGATCGACAATTCCAAGATA 60.279 44.000 0.00 0.00 34.64 1.98
271 272 2.029838 ACTCCATCGCATCTTGTTCC 57.970 50.000 0.00 0.00 0.00 3.62
280 281 7.335673 TGATTACAAATCTTAAACTCCATCGCA 59.664 33.333 1.70 0.00 0.00 5.10
293 294 7.576236 CGTGTGAGTTTCTGATTACAAATCTT 58.424 34.615 1.70 0.00 0.00 2.40
299 300 3.723260 TGCGTGTGAGTTTCTGATTACA 58.277 40.909 0.00 0.00 0.00 2.41
315 317 1.335872 GGGTCATTTGGAAGTTGCGTG 60.336 52.381 0.00 0.00 0.00 5.34
333 335 3.091545 ACACTAGCAATGTTCCATTGGG 58.908 45.455 16.29 0.00 0.00 4.12
350 352 9.846248 GTGCTCTATTGATTTTAATGAAACACT 57.154 29.630 0.00 0.00 0.00 3.55
514 561 9.135843 CCTTTTTCTTTTCTTTTTGTAAGTCGT 57.864 29.630 0.00 0.00 0.00 4.34
527 574 6.071672 GCTTATCAGCCTCCTTTTTCTTTTCT 60.072 38.462 0.00 0.00 40.61 2.52
529 576 5.539955 TGCTTATCAGCCTCCTTTTTCTTTT 59.460 36.000 0.00 0.00 46.74 2.27
533 580 3.379688 CCTGCTTATCAGCCTCCTTTTTC 59.620 47.826 0.00 0.00 46.74 2.29
534 581 3.359950 CCTGCTTATCAGCCTCCTTTTT 58.640 45.455 0.00 0.00 46.74 1.94
538 585 1.059006 CCCCTGCTTATCAGCCTCCT 61.059 60.000 0.00 0.00 46.74 3.69
560 607 4.581409 AGACCTAACGCAAGGCTTTAAAAA 59.419 37.500 0.00 0.00 40.62 1.94
569 616 1.078759 CGCAGAGACCTAACGCAAGG 61.079 60.000 2.17 2.17 46.39 3.61
632 872 4.202111 GGGCAACATTATTTGTCCGCTTAT 60.202 41.667 0.00 0.00 41.31 1.73
633 873 3.129638 GGGCAACATTATTTGTCCGCTTA 59.870 43.478 0.00 0.00 41.31 3.09
634 874 2.094234 GGGCAACATTATTTGTCCGCTT 60.094 45.455 0.00 0.00 41.31 4.68
635 875 1.476488 GGGCAACATTATTTGTCCGCT 59.524 47.619 0.00 0.00 41.31 5.52
684 925 1.535226 GGTTTGGTTTGCCGTCTTGAC 60.535 52.381 0.00 0.00 37.67 3.18
718 959 2.123342 CTCGCTGTAGCTAATGACTGC 58.877 52.381 0.00 0.12 39.32 4.40
755 996 4.722700 ATTTCGGCACCAGCGGCT 62.723 61.111 0.00 0.00 43.41 5.52
758 999 1.298157 TTCTCATTTCGGCACCAGCG 61.298 55.000 0.00 0.00 43.41 5.18
763 1004 1.069227 GGTGTGTTCTCATTTCGGCAC 60.069 52.381 0.00 0.00 0.00 5.01
781 1022 2.017049 GATTGATTTAGCGCTGTGGGT 58.983 47.619 22.90 0.65 0.00 4.51
788 1029 0.235926 GGCTCCGATTGATTTAGCGC 59.764 55.000 0.00 0.00 33.96 5.92
789 1030 0.508641 CGGCTCCGATTGATTTAGCG 59.491 55.000 1.35 0.00 42.83 4.26
793 1034 0.251916 TGGACGGCTCCGATTGATTT 59.748 50.000 15.95 0.00 39.88 2.17
796 1037 2.577059 GTGGACGGCTCCGATTGA 59.423 61.111 15.95 0.00 39.88 2.57
815 1056 3.995669 CGGGTGACGTGTTGTGCG 61.996 66.667 0.00 0.00 37.93 5.34
820 1061 1.005394 GGTGATCGGGTGACGTGTT 60.005 57.895 0.00 0.00 44.69 3.32
862 1103 0.896940 AGGTCGGTTAGTTGAGCGGA 60.897 55.000 0.00 0.00 40.63 5.54
863 1104 0.736325 CAGGTCGGTTAGTTGAGCGG 60.736 60.000 0.00 0.00 40.63 5.52
864 1105 0.242825 TCAGGTCGGTTAGTTGAGCG 59.757 55.000 0.00 0.00 41.53 5.03
873 1114 3.113260 CTGAACTTCTTCAGGTCGGTT 57.887 47.619 2.98 0.00 46.87 4.44
924 1477 1.897037 TATCTGGAGGGGTGGCTGGA 61.897 60.000 0.00 0.00 0.00 3.86
982 1546 4.446413 GTAGGACGGTGGCGTGGG 62.446 72.222 0.00 0.00 0.00 4.61
983 1547 3.229156 TTGTAGGACGGTGGCGTGG 62.229 63.158 0.00 0.00 0.00 4.94
984 1548 2.025418 GTTGTAGGACGGTGGCGTG 61.025 63.158 0.00 0.00 0.00 5.34
985 1549 2.341176 GTTGTAGGACGGTGGCGT 59.659 61.111 0.00 0.00 0.00 5.68
986 1550 1.736645 CTGTTGTAGGACGGTGGCG 60.737 63.158 0.00 0.00 0.00 5.69
987 1551 0.669625 GTCTGTTGTAGGACGGTGGC 60.670 60.000 0.00 0.00 0.00 5.01
988 1552 0.677288 TGTCTGTTGTAGGACGGTGG 59.323 55.000 0.00 0.00 35.45 4.61
989 1553 1.604693 GGTGTCTGTTGTAGGACGGTG 60.605 57.143 0.00 0.00 35.45 4.94
1040 1604 4.760047 ATGACGTGCAGACCCGGC 62.760 66.667 0.00 0.00 0.00 6.13
1232 1803 5.491635 AAATATTTTTCTCTCCGCTCTGC 57.508 39.130 0.00 0.00 0.00 4.26
1276 1847 0.681564 TCTTCTCCTCCCTGTCGCTC 60.682 60.000 0.00 0.00 0.00 5.03
1277 1848 0.251832 TTCTTCTCCTCCCTGTCGCT 60.252 55.000 0.00 0.00 0.00 4.93
1278 1849 0.608640 TTTCTTCTCCTCCCTGTCGC 59.391 55.000 0.00 0.00 0.00 5.19
1279 1850 1.066787 GGTTTCTTCTCCTCCCTGTCG 60.067 57.143 0.00 0.00 0.00 4.35
1324 1901 1.376609 CGCCGGCAGCCTTTATTTCT 61.377 55.000 28.98 0.00 38.78 2.52
1436 2032 2.037902 AGCTGATGATGATGAGCTCCAG 59.962 50.000 12.15 9.46 45.06 3.86
1473 2076 0.947244 CACACACACCTTGCCTTCTC 59.053 55.000 0.00 0.00 0.00 2.87
1485 2088 2.625314 CCAAGAGAGAGAGACACACACA 59.375 50.000 0.00 0.00 0.00 3.72
1486 2089 2.887783 TCCAAGAGAGAGAGACACACAC 59.112 50.000 0.00 0.00 0.00 3.82
1488 2091 3.181501 CGATCCAAGAGAGAGAGACACAC 60.182 52.174 0.00 0.00 0.00 3.82
1490 2093 2.223479 GCGATCCAAGAGAGAGAGACAC 60.223 54.545 0.00 0.00 0.00 3.67
1491 2094 2.020720 GCGATCCAAGAGAGAGAGACA 58.979 52.381 0.00 0.00 0.00 3.41
1492 2095 1.002900 CGCGATCCAAGAGAGAGAGAC 60.003 57.143 0.00 0.00 0.00 3.36
1499 2102 2.363795 ACCCCGCGATCCAAGAGA 60.364 61.111 8.23 0.00 0.00 3.10
1526 2129 2.031163 AAAGCAACCGAGCTCGCT 59.969 55.556 30.49 18.73 45.89 4.93
1565 2181 1.082954 CCTCTCCCCTTCCCTTCCA 59.917 63.158 0.00 0.00 0.00 3.53
1777 2395 5.682659 TGCTCTGGTAGTAGAAGTAGTAGG 58.317 45.833 0.00 0.00 0.00 3.18
1786 2404 2.350057 AGCGATGCTCTGGTAGTAGA 57.650 50.000 0.00 0.00 30.62 2.59
1794 2415 2.115595 CGAAGAACTAGCGATGCTCTG 58.884 52.381 0.00 0.00 40.44 3.35
1803 2424 1.470112 GCAGGGAGACGAAGAACTAGC 60.470 57.143 0.00 0.00 0.00 3.42
1824 2445 2.586357 GCTCTGATTCCGTCCCGC 60.586 66.667 0.00 0.00 0.00 6.13
2056 2677 2.075278 AAGGAAGGAAGGGGGAGGGT 62.075 60.000 0.00 0.00 0.00 4.34
2057 2678 1.230314 AAGGAAGGAAGGGGGAGGG 60.230 63.158 0.00 0.00 0.00 4.30
2062 2687 1.926426 ATGGCGAAGGAAGGAAGGGG 61.926 60.000 0.00 0.00 0.00 4.79
2072 2697 1.084370 GGAGAACGTCATGGCGAAGG 61.084 60.000 28.94 0.00 35.59 3.46
2098 2747 4.748600 TCGATCACTAGTAGTCCACGTATG 59.251 45.833 0.00 0.00 0.00 2.39
2099 2748 4.953667 TCGATCACTAGTAGTCCACGTAT 58.046 43.478 0.00 0.00 0.00 3.06
2120 2770 1.479323 TGGGCGGTTAGTACAGTGATC 59.521 52.381 0.00 0.00 0.00 2.92
2121 2771 1.563924 TGGGCGGTTAGTACAGTGAT 58.436 50.000 0.00 0.00 0.00 3.06
2123 2773 1.722011 CTTGGGCGGTTAGTACAGTG 58.278 55.000 0.00 0.00 0.00 3.66
2127 2780 0.461516 GAGGCTTGGGCGGTTAGTAC 60.462 60.000 0.00 0.00 39.81 2.73
2231 2884 3.074412 AGCCTAACAAACTGTGGAATCG 58.926 45.455 0.00 0.00 0.00 3.34
2244 2897 2.173519 AGCTACCGTAACAGCCTAACA 58.826 47.619 0.00 0.00 38.61 2.41
2271 2924 6.474102 TGCTTAACAAAAGACGAAACCATTTC 59.526 34.615 0.00 0.00 36.32 2.17
2392 3046 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2393 3047 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2394 3048 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2395 3049 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
2396 3050 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
2397 3051 1.135315 TCGACAAGTATTTCCGGACGG 60.135 52.381 1.83 3.96 0.00 4.79
2398 3052 2.267188 TCGACAAGTATTTCCGGACG 57.733 50.000 1.83 0.27 0.00 4.79
2399 3053 3.841643 TCTTCGACAAGTATTTCCGGAC 58.158 45.455 1.83 0.00 0.00 4.79
2400 3054 4.524316 TTCTTCGACAAGTATTTCCGGA 57.476 40.909 0.00 0.00 0.00 5.14
2401 3055 5.560148 CATTTCTTCGACAAGTATTTCCGG 58.440 41.667 0.00 0.00 0.00 5.14
2402 3056 5.022021 GCATTTCTTCGACAAGTATTTCCG 58.978 41.667 0.00 0.00 0.00 4.30
2403 3057 5.938322 TGCATTTCTTCGACAAGTATTTCC 58.062 37.500 0.00 0.00 0.00 3.13
2404 3058 9.554724 TTTATGCATTTCTTCGACAAGTATTTC 57.445 29.630 3.54 0.00 0.00 2.17
2405 3059 9.906660 TTTTATGCATTTCTTCGACAAGTATTT 57.093 25.926 3.54 0.00 0.00 1.40
2406 3060 9.906660 TTTTTATGCATTTCTTCGACAAGTATT 57.093 25.926 3.54 0.00 0.00 1.89
2408 3062 9.340695 CATTTTTATGCATTTCTTCGACAAGTA 57.659 29.630 3.54 0.00 0.00 2.24
2409 3063 7.329226 CCATTTTTATGCATTTCTTCGACAAGT 59.671 33.333 3.54 0.00 0.00 3.16
2410 3064 7.541783 TCCATTTTTATGCATTTCTTCGACAAG 59.458 33.333 3.54 0.00 0.00 3.16
2411 3065 7.374272 TCCATTTTTATGCATTTCTTCGACAA 58.626 30.769 3.54 0.00 0.00 3.18
2412 3066 6.918626 TCCATTTTTATGCATTTCTTCGACA 58.081 32.000 3.54 0.00 0.00 4.35
2413 3067 7.489113 ACATCCATTTTTATGCATTTCTTCGAC 59.511 33.333 3.54 0.00 0.00 4.20
2414 3068 7.546358 ACATCCATTTTTATGCATTTCTTCGA 58.454 30.769 3.54 0.00 0.00 3.71
2415 3069 7.760131 ACATCCATTTTTATGCATTTCTTCG 57.240 32.000 3.54 0.00 0.00 3.79
2450 3104 8.871125 AGGAATGGATGTATCTAGACGTATTTT 58.129 33.333 0.00 0.00 0.00 1.82
2451 3105 8.423906 AGGAATGGATGTATCTAGACGTATTT 57.576 34.615 0.00 0.00 0.00 1.40
2452 3106 7.122948 GGAGGAATGGATGTATCTAGACGTATT 59.877 40.741 0.00 0.00 0.00 1.89
2453 3107 6.603997 GGAGGAATGGATGTATCTAGACGTAT 59.396 42.308 0.00 0.00 0.00 3.06
2454 3108 5.944599 GGAGGAATGGATGTATCTAGACGTA 59.055 44.000 0.00 0.00 0.00 3.57
2455 3109 4.767928 GGAGGAATGGATGTATCTAGACGT 59.232 45.833 0.00 0.00 0.00 4.34
2456 3110 4.142578 CGGAGGAATGGATGTATCTAGACG 60.143 50.000 0.00 0.00 0.00 4.18
2457 3111 5.010933 TCGGAGGAATGGATGTATCTAGAC 58.989 45.833 0.00 0.00 0.00 2.59
2458 3112 5.010933 GTCGGAGGAATGGATGTATCTAGA 58.989 45.833 0.00 0.00 0.00 2.43
2459 3113 4.767409 TGTCGGAGGAATGGATGTATCTAG 59.233 45.833 0.00 0.00 0.00 2.43
2460 3114 4.736473 TGTCGGAGGAATGGATGTATCTA 58.264 43.478 0.00 0.00 0.00 1.98
2461 3115 3.576861 TGTCGGAGGAATGGATGTATCT 58.423 45.455 0.00 0.00 0.00 1.98
2462 3116 4.202264 ACTTGTCGGAGGAATGGATGTATC 60.202 45.833 0.00 0.00 0.00 2.24
2463 3117 3.711704 ACTTGTCGGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 0.00 2.29
2464 3118 3.104512 ACTTGTCGGAGGAATGGATGTA 58.895 45.455 0.00 0.00 0.00 2.29
2465 3119 1.909302 ACTTGTCGGAGGAATGGATGT 59.091 47.619 0.00 0.00 0.00 3.06
2466 3120 2.698855 ACTTGTCGGAGGAATGGATG 57.301 50.000 0.00 0.00 0.00 3.51
2467 3121 5.368989 GAAATACTTGTCGGAGGAATGGAT 58.631 41.667 0.00 0.00 0.00 3.41
2468 3122 4.383770 GGAAATACTTGTCGGAGGAATGGA 60.384 45.833 0.00 0.00 0.00 3.41
2469 3123 3.877508 GGAAATACTTGTCGGAGGAATGG 59.122 47.826 0.00 0.00 0.00 3.16
2470 3124 3.555956 CGGAAATACTTGTCGGAGGAATG 59.444 47.826 0.00 0.00 0.00 2.67
2471 3125 3.431766 CCGGAAATACTTGTCGGAGGAAT 60.432 47.826 0.00 0.00 42.94 3.01
2472 3126 2.093869 CCGGAAATACTTGTCGGAGGAA 60.094 50.000 0.00 0.00 42.94 3.36
2473 3127 1.479323 CCGGAAATACTTGTCGGAGGA 59.521 52.381 0.00 0.00 42.94 3.71
2474 3128 1.479323 TCCGGAAATACTTGTCGGAGG 59.521 52.381 0.00 0.00 43.84 4.30
2475 3129 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
2476 3130 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
2477 3131 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
2478 3132 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
2479 3133 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2480 3134 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2481 3135 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2482 3136 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2483 3137 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2484 3138 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2485 3139 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2486 3140 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2487 3141 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
2488 3142 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
2489 3143 1.929860 ATGTACTCCCTCCGTCCGGA 61.930 60.000 0.00 0.00 42.90 5.14
2490 3144 0.179009 TATGTACTCCCTCCGTCCGG 60.179 60.000 0.00 0.00 0.00 5.14
2491 3145 1.336125 GTTATGTACTCCCTCCGTCCG 59.664 57.143 0.00 0.00 0.00 4.79
2492 3146 2.664015 AGTTATGTACTCCCTCCGTCC 58.336 52.381 0.00 0.00 28.23 4.79
2493 3147 4.886489 AGTAAGTTATGTACTCCCTCCGTC 59.114 45.833 0.00 0.00 35.54 4.79
2494 3148 4.864726 AGTAAGTTATGTACTCCCTCCGT 58.135 43.478 0.00 0.00 35.54 4.69
2495 3149 6.949352 TTAGTAAGTTATGTACTCCCTCCG 57.051 41.667 0.00 0.00 35.54 4.63
2496 3150 8.534496 TGTTTTAGTAAGTTATGTACTCCCTCC 58.466 37.037 0.00 0.00 35.54 4.30
2497 3151 9.933723 TTGTTTTAGTAAGTTATGTACTCCCTC 57.066 33.333 0.00 0.00 35.54 4.30
2498 3152 9.939802 CTTGTTTTAGTAAGTTATGTACTCCCT 57.060 33.333 0.00 0.00 35.54 4.20
2499 3153 9.933723 TCTTGTTTTAGTAAGTTATGTACTCCC 57.066 33.333 0.00 0.00 35.54 4.30
2544 3201 1.067516 TGCTGAAAACTGAAAGCCTGC 59.932 47.619 0.00 0.00 37.60 4.85
2545 3202 3.441496 TTGCTGAAAACTGAAAGCCTG 57.559 42.857 0.00 0.00 37.60 4.85
2552 3209 6.882610 ACTATGTTGATTGCTGAAAACTGA 57.117 33.333 0.00 0.00 0.00 3.41
2574 3231 7.843490 TCTGGCATGTAAACAGAGTAAATAC 57.157 36.000 0.00 0.00 36.41 1.89
2576 3233 7.148018 CCATTCTGGCATGTAAACAGAGTAAAT 60.148 37.037 10.04 2.03 41.71 1.40
2578 3235 5.647658 CCATTCTGGCATGTAAACAGAGTAA 59.352 40.000 10.04 0.53 41.71 2.24
2579 3236 5.185454 CCATTCTGGCATGTAAACAGAGTA 58.815 41.667 10.04 1.05 41.71 2.59
2597 3254 1.133668 AGCAGAGCATAACCCCCATTC 60.134 52.381 0.00 0.00 0.00 2.67
2599 3256 0.929244 AAGCAGAGCATAACCCCCAT 59.071 50.000 0.00 0.00 0.00 4.00
2666 3323 4.256920 CGAAACAGGAATGAGGAATGAGT 58.743 43.478 0.00 0.00 0.00 3.41
2673 3330 5.631026 CAAATACACGAAACAGGAATGAGG 58.369 41.667 0.00 0.00 0.00 3.86
2674 3331 5.088739 GCAAATACACGAAACAGGAATGAG 58.911 41.667 0.00 0.00 0.00 2.90
2676 3333 4.793071 TGCAAATACACGAAACAGGAATG 58.207 39.130 0.00 0.00 0.00 2.67
2677 3334 4.518970 ACTGCAAATACACGAAACAGGAAT 59.481 37.500 0.00 0.00 0.00 3.01
2680 3337 3.664276 CGACTGCAAATACACGAAACAGG 60.664 47.826 0.00 0.00 0.00 4.00
2681 3338 3.059868 ACGACTGCAAATACACGAAACAG 60.060 43.478 0.00 0.00 0.00 3.16
2682 3339 2.867368 ACGACTGCAAATACACGAAACA 59.133 40.909 0.00 0.00 0.00 2.83
2683 3340 3.466836 GACGACTGCAAATACACGAAAC 58.533 45.455 0.00 0.00 0.00 2.78
2685 3342 1.717113 CGACGACTGCAAATACACGAA 59.283 47.619 0.00 0.00 0.00 3.85
2687 3344 0.365523 CCGACGACTGCAAATACACG 59.634 55.000 0.00 0.00 0.00 4.49
2688 3345 1.425412 ACCGACGACTGCAAATACAC 58.575 50.000 0.00 0.00 0.00 2.90
2720 3377 3.566742 GTGTTCCAACCGTAGATTTTGGT 59.433 43.478 0.00 0.00 37.68 3.67
2732 3389 2.030862 TACGCCGGTGTTCCAACC 59.969 61.111 28.19 0.00 36.82 3.77
2747 3404 1.207329 AGAACCTCCGGAGCAATGTAC 59.793 52.381 26.87 11.58 0.00 2.90
2771 3428 8.790718 CATACCTTTCCATCATATTCCTTCTTG 58.209 37.037 0.00 0.00 0.00 3.02
2853 3510 5.189145 AGGGCTATAAGTATTTCATACCCCG 59.811 44.000 0.00 0.00 35.89 5.73
2860 3517 8.836413 CGAAATTTCAGGGCTATAAGTATTTCA 58.164 33.333 17.99 0.00 32.05 2.69
2951 3638 7.962934 TTCCGCGTATTTCAGAAATTATTTG 57.037 32.000 13.71 1.73 32.38 2.32
2968 3655 2.954316 GGAATTTTGGAAATTCCGCGT 58.046 42.857 22.33 0.00 44.15 6.01
2973 3660 6.360681 CGAGATATGCGGAATTTTGGAAATTC 59.639 38.462 14.63 14.63 36.25 2.17
3033 3725 3.905784 GCAATATGTATGCTTCAAGGCC 58.094 45.455 0.00 0.00 40.64 5.19
3160 3868 5.292834 GGGATTATACATCATGCATCTCACG 59.707 44.000 0.00 0.00 0.00 4.35
3180 3888 5.636123 CAGAGTCTAGTAGTACCATGGGAT 58.364 45.833 18.09 3.62 0.00 3.85
3210 3931 1.804372 CGGCAGGTAGCTTGAGATGAC 60.804 57.143 0.00 0.00 44.79 3.06
3221 3942 2.213499 CAAAGGATTAGCGGCAGGTAG 58.787 52.381 1.45 0.00 0.00 3.18
3227 3948 2.223044 CGAAGAACAAAGGATTAGCGGC 60.223 50.000 0.00 0.00 0.00 6.53
3245 3966 3.938334 TCCGCAATCTTCATTTCATCGAA 59.062 39.130 0.00 0.00 0.00 3.71
3289 4010 4.212214 GCACCAACTAGCATAACATAGAGC 59.788 45.833 0.00 0.00 0.00 4.09
3377 4098 9.545928 AGATGGTCAAGAGATTAAGATAGCTAT 57.454 33.333 5.76 5.76 0.00 2.97
3378 4099 8.948401 AGATGGTCAAGAGATTAAGATAGCTA 57.052 34.615 0.00 0.00 0.00 3.32
3382 4103 8.774546 ACAGAGATGGTCAAGAGATTAAGATA 57.225 34.615 0.00 0.00 0.00 1.98
3391 4113 4.797800 TCAGAACAGAGATGGTCAAGAG 57.202 45.455 0.00 0.00 0.00 2.85
3411 4133 5.557891 AGCAAGCTCATTAGTTTGTGATC 57.442 39.130 5.53 0.00 43.63 2.92
3412 4134 5.972107 AAGCAAGCTCATTAGTTTGTGAT 57.028 34.783 5.53 0.00 43.63 3.06
3414 4136 4.149396 GCAAAGCAAGCTCATTAGTTTGTG 59.851 41.667 5.53 0.00 43.63 3.33
3415 4137 4.301628 GCAAAGCAAGCTCATTAGTTTGT 58.698 39.130 5.53 0.00 43.63 2.83
3416 4138 3.676646 GGCAAAGCAAGCTCATTAGTTTG 59.323 43.478 0.00 0.00 44.32 2.93
3417 4139 3.321682 TGGCAAAGCAAGCTCATTAGTTT 59.678 39.130 0.00 0.00 0.00 2.66
3421 4143 2.751259 CTCTGGCAAAGCAAGCTCATTA 59.249 45.455 0.00 0.00 28.00 1.90
3422 4144 1.544691 CTCTGGCAAAGCAAGCTCATT 59.455 47.619 0.00 0.00 28.00 2.57
3424 4146 0.892358 CCTCTGGCAAAGCAAGCTCA 60.892 55.000 0.00 0.00 28.00 4.26
3425 4147 0.607489 TCCTCTGGCAAAGCAAGCTC 60.607 55.000 0.00 0.00 28.00 4.09
3426 4148 0.039326 ATCCTCTGGCAAAGCAAGCT 59.961 50.000 0.00 0.00 28.00 3.74
3432 4161 4.334759 CACACTCAATATCCTCTGGCAAAG 59.665 45.833 0.00 0.00 0.00 2.77
3470 4199 4.037565 TCGGAAGATATGTGCACGTAATCT 59.962 41.667 22.04 19.60 33.31 2.40
3554 4283 8.464404 GTGACAACACTACATGGTTAGTAGATA 58.536 37.037 7.30 0.00 41.07 1.98
3555 4284 7.321153 GTGACAACACTACATGGTTAGTAGAT 58.679 38.462 7.30 0.00 41.07 1.98
3556 4285 6.684686 GTGACAACACTACATGGTTAGTAGA 58.315 40.000 7.30 0.00 41.07 2.59
3557 4286 6.946229 GTGACAACACTACATGGTTAGTAG 57.054 41.667 0.00 0.00 43.51 2.57
3571 4300 3.247648 ACGCAACAATCTAGTGACAACAC 59.752 43.478 0.00 0.00 46.24 3.32
3573 4302 3.799035 CACGCAACAATCTAGTGACAAC 58.201 45.455 0.00 0.00 35.03 3.32
3575 4304 1.798223 GCACGCAACAATCTAGTGACA 59.202 47.619 0.00 0.00 35.03 3.58
3576 4305 1.798223 TGCACGCAACAATCTAGTGAC 59.202 47.619 0.00 0.00 35.03 3.67
3577 4306 2.068519 CTGCACGCAACAATCTAGTGA 58.931 47.619 0.00 0.00 35.03 3.41
3578 4307 1.800586 ACTGCACGCAACAATCTAGTG 59.199 47.619 0.00 0.00 36.05 2.74
3579 4308 2.169832 ACTGCACGCAACAATCTAGT 57.830 45.000 0.00 0.00 0.00 2.57
3580 4309 3.542712 AAACTGCACGCAACAATCTAG 57.457 42.857 0.00 0.00 0.00 2.43
3581 4310 5.621197 AATAAACTGCACGCAACAATCTA 57.379 34.783 0.00 0.00 0.00 1.98
3583 4312 5.574815 AAAATAAACTGCACGCAACAATC 57.425 34.783 0.00 0.00 0.00 2.67
3585 4314 5.460419 CCTTAAAATAAACTGCACGCAACAA 59.540 36.000 0.00 0.00 0.00 2.83
3586 4315 4.979197 CCTTAAAATAAACTGCACGCAACA 59.021 37.500 0.00 0.00 0.00 3.33
3588 4317 5.189659 ACCTTAAAATAAACTGCACGCAA 57.810 34.783 0.00 0.00 0.00 4.85
3590 4319 5.216648 TCAACCTTAAAATAAACTGCACGC 58.783 37.500 0.00 0.00 0.00 5.34
3592 4321 9.908152 AGTTATCAACCTTAAAATAAACTGCAC 57.092 29.630 0.00 0.00 0.00 4.57
3601 4330 9.696917 CTCTGCAAAAGTTATCAACCTTAAAAT 57.303 29.630 0.00 0.00 0.00 1.82
3606 4335 6.959639 TTCTCTGCAAAAGTTATCAACCTT 57.040 33.333 0.00 0.00 0.00 3.50
3616 4345 4.219288 GGGATTGTGATTCTCTGCAAAAGT 59.781 41.667 0.00 0.00 0.00 2.66
3640 4379 4.137116 CCACGGATGGTTTCTTATCTCA 57.863 45.455 0.00 0.00 41.64 3.27
3793 4532 0.246635 ACTGGTTGATCCGAGAACCG 59.753 55.000 7.87 5.88 44.04 4.44
3940 4679 7.705325 GCATCTTACGGTCAACTTATAGAAGAA 59.295 37.037 3.65 0.00 36.45 2.52
3942 4681 6.421202 GGCATCTTACGGTCAACTTATAGAAG 59.579 42.308 0.00 0.00 38.76 2.85
3971 4710 3.118555 TCCCTTCTGAGAGTCTCGAGTAG 60.119 52.174 15.34 14.53 32.35 2.57
3982 4721 2.158505 CGGTACCCTATCCCTTCTGAGA 60.159 54.545 6.25 0.00 0.00 3.27
4042 4788 5.884322 TGGAAGTACAGAGACCAACTAGTA 58.116 41.667 0.00 0.00 0.00 1.82
4043 4789 4.737578 TGGAAGTACAGAGACCAACTAGT 58.262 43.478 0.00 0.00 0.00 2.57
4044 4790 5.723672 TTGGAAGTACAGAGACCAACTAG 57.276 43.478 0.00 0.00 36.00 2.57
4232 4981 3.741344 AGGTCGAAACGAAACTGATCAAG 59.259 43.478 0.00 0.00 37.72 3.02
4330 5123 3.118482 AGTGCATATCTCAACACCTGGAG 60.118 47.826 0.00 0.00 33.46 3.86
4493 5287 6.876257 AGTATTGACTCCTGAATTTCACAGAC 59.124 38.462 0.00 0.00 37.54 3.51
4509 5303 4.580868 TCTGAGTGTCTCGAGTATTGACT 58.419 43.478 13.13 8.11 39.20 3.41
4510 5304 4.948608 TCTGAGTGTCTCGAGTATTGAC 57.051 45.455 13.13 3.42 32.35 3.18
4511 5305 4.396478 CCTTCTGAGTGTCTCGAGTATTGA 59.604 45.833 13.13 0.73 32.35 2.57
4513 5307 3.697045 CCCTTCTGAGTGTCTCGAGTATT 59.303 47.826 13.13 0.00 32.35 1.89
4514 5308 3.054287 TCCCTTCTGAGTGTCTCGAGTAT 60.054 47.826 13.13 0.00 32.35 2.12
4515 5309 2.305052 TCCCTTCTGAGTGTCTCGAGTA 59.695 50.000 13.13 0.00 32.35 2.59
4516 5310 1.074084 TCCCTTCTGAGTGTCTCGAGT 59.926 52.381 13.13 0.00 32.35 4.18
4517 5311 1.470890 GTCCCTTCTGAGTGTCTCGAG 59.529 57.143 5.93 5.93 32.35 4.04
4518 5312 1.202891 TGTCCCTTCTGAGTGTCTCGA 60.203 52.381 0.00 0.00 32.35 4.04
4519 5313 1.201181 CTGTCCCTTCTGAGTGTCTCG 59.799 57.143 0.00 0.00 32.35 4.04
4520 5314 1.548269 CCTGTCCCTTCTGAGTGTCTC 59.452 57.143 0.00 0.00 0.00 3.36
4522 5316 0.610687 CCCTGTCCCTTCTGAGTGTC 59.389 60.000 0.00 0.00 0.00 3.67
4523 5317 0.104934 ACCCTGTCCCTTCTGAGTGT 60.105 55.000 0.00 0.00 0.00 3.55
4524 5318 1.059913 AACCCTGTCCCTTCTGAGTG 58.940 55.000 0.00 0.00 0.00 3.51
4525 5319 1.821088 AAACCCTGTCCCTTCTGAGT 58.179 50.000 0.00 0.00 0.00 3.41
4526 5320 4.367039 TTTAAACCCTGTCCCTTCTGAG 57.633 45.455 0.00 0.00 0.00 3.35
4527 5321 4.799715 TTTTAAACCCTGTCCCTTCTGA 57.200 40.909 0.00 0.00 0.00 3.27
4528 5322 6.041523 TGAAATTTTAAACCCTGTCCCTTCTG 59.958 38.462 0.00 0.00 0.00 3.02
4529 5323 6.140377 TGAAATTTTAAACCCTGTCCCTTCT 58.860 36.000 0.00 0.00 0.00 2.85
4530 5324 6.413783 TGAAATTTTAAACCCTGTCCCTTC 57.586 37.500 0.00 0.00 0.00 3.46
4531 5325 5.221641 GCTGAAATTTTAAACCCTGTCCCTT 60.222 40.000 0.00 0.00 0.00 3.95
4532 5326 4.283467 GCTGAAATTTTAAACCCTGTCCCT 59.717 41.667 0.00 0.00 0.00 4.20
4533 5327 4.039852 TGCTGAAATTTTAAACCCTGTCCC 59.960 41.667 0.00 0.00 0.00 4.46
4534 5328 5.208463 TGCTGAAATTTTAAACCCTGTCC 57.792 39.130 0.00 0.00 0.00 4.02
4535 5329 7.432252 CGATATGCTGAAATTTTAAACCCTGTC 59.568 37.037 0.00 0.00 0.00 3.51
4536 5330 7.093945 ACGATATGCTGAAATTTTAAACCCTGT 60.094 33.333 0.00 0.00 0.00 4.00
4537 5331 7.220683 CACGATATGCTGAAATTTTAAACCCTG 59.779 37.037 0.00 0.00 0.00 4.45
4538 5332 7.257722 CACGATATGCTGAAATTTTAAACCCT 58.742 34.615 0.00 0.00 0.00 4.34
4539 5333 6.475402 CCACGATATGCTGAAATTTTAAACCC 59.525 38.462 0.00 0.00 0.00 4.11
4540 5334 7.220108 GTCCACGATATGCTGAAATTTTAAACC 59.780 37.037 0.00 0.00 0.00 3.27
4541 5335 7.968405 AGTCCACGATATGCTGAAATTTTAAAC 59.032 33.333 0.00 0.00 0.00 2.01
4542 5336 7.967854 CAGTCCACGATATGCTGAAATTTTAAA 59.032 33.333 0.00 0.00 0.00 1.52
4543 5337 7.335673 TCAGTCCACGATATGCTGAAATTTTAA 59.664 33.333 0.00 0.00 33.84 1.52
4544 5338 6.821160 TCAGTCCACGATATGCTGAAATTTTA 59.179 34.615 0.00 0.00 33.84 1.52
4545 5339 5.647658 TCAGTCCACGATATGCTGAAATTTT 59.352 36.000 0.00 0.00 33.84 1.82
4546 5340 5.065218 GTCAGTCCACGATATGCTGAAATTT 59.935 40.000 0.00 0.00 37.84 1.82
4547 5341 4.572389 GTCAGTCCACGATATGCTGAAATT 59.428 41.667 0.00 0.00 37.84 1.82
4548 5342 4.122776 GTCAGTCCACGATATGCTGAAAT 58.877 43.478 0.00 0.00 37.84 2.17
4549 5343 3.056179 TGTCAGTCCACGATATGCTGAAA 60.056 43.478 0.00 0.00 37.84 2.69
4550 5344 2.495669 TGTCAGTCCACGATATGCTGAA 59.504 45.455 0.00 0.00 37.84 3.02
4551 5345 2.099405 TGTCAGTCCACGATATGCTGA 58.901 47.619 0.00 0.00 34.30 4.26
4552 5346 2.584492 TGTCAGTCCACGATATGCTG 57.416 50.000 0.00 0.00 0.00 4.41
4553 5347 2.735444 CGTTGTCAGTCCACGATATGCT 60.735 50.000 0.00 0.00 0.00 3.79
4554 5348 1.588404 CGTTGTCAGTCCACGATATGC 59.412 52.381 0.00 0.00 0.00 3.14
4555 5349 3.145212 TCGTTGTCAGTCCACGATATG 57.855 47.619 0.00 0.00 0.00 1.78
4556 5350 4.023107 CCTATCGTTGTCAGTCCACGATAT 60.023 45.833 14.65 0.00 42.38 1.63
4557 5351 3.314357 CCTATCGTTGTCAGTCCACGATA 59.686 47.826 13.91 13.91 42.45 2.92
4558 5352 2.099263 CCTATCGTTGTCAGTCCACGAT 59.901 50.000 13.25 13.25 44.27 3.73
4559 5353 1.471287 CCTATCGTTGTCAGTCCACGA 59.529 52.381 0.30 0.30 37.24 4.35
4560 5354 1.469251 CCCTATCGTTGTCAGTCCACG 60.469 57.143 0.00 0.00 0.00 4.94
4561 5355 1.739371 GCCCTATCGTTGTCAGTCCAC 60.739 57.143 0.00 0.00 0.00 4.02
4562 5356 0.535335 GCCCTATCGTTGTCAGTCCA 59.465 55.000 0.00 0.00 0.00 4.02
4563 5357 0.179081 GGCCCTATCGTTGTCAGTCC 60.179 60.000 0.00 0.00 0.00 3.85
4570 5364 1.227263 CTCCGTGGCCCTATCGTTG 60.227 63.158 0.00 0.00 0.00 4.10
4611 5405 1.804748 GACGAGTGGGTTTGGTTGATC 59.195 52.381 0.00 0.00 0.00 2.92
4612 5406 1.420138 AGACGAGTGGGTTTGGTTGAT 59.580 47.619 0.00 0.00 0.00 2.57
4626 5420 7.827819 TTGTTAATCTGGATTGTTAGACGAG 57.172 36.000 6.13 0.00 32.50 4.18
4627 5421 8.610248 TTTTGTTAATCTGGATTGTTAGACGA 57.390 30.769 6.13 0.00 32.50 4.20
4737 5567 1.532437 TGTGCTTTCAGTTGCTCGATG 59.468 47.619 0.00 0.00 0.00 3.84
4739 5569 1.662517 TTGTGCTTTCAGTTGCTCGA 58.337 45.000 0.00 0.00 0.00 4.04
4740 5570 2.473530 TTTGTGCTTTCAGTTGCTCG 57.526 45.000 0.00 0.00 0.00 5.03
4741 5571 3.774066 AGTTTTGTGCTTTCAGTTGCTC 58.226 40.909 0.00 0.00 0.00 4.26
4742 5572 3.429410 GGAGTTTTGTGCTTTCAGTTGCT 60.429 43.478 0.00 0.00 0.00 3.91
4743 5573 2.860136 GGAGTTTTGTGCTTTCAGTTGC 59.140 45.455 0.00 0.00 0.00 4.17
4744 5574 3.859386 GTGGAGTTTTGTGCTTTCAGTTG 59.141 43.478 0.00 0.00 0.00 3.16
4745 5575 3.509575 TGTGGAGTTTTGTGCTTTCAGTT 59.490 39.130 0.00 0.00 0.00 3.16
4746 5576 3.088532 TGTGGAGTTTTGTGCTTTCAGT 58.911 40.909 0.00 0.00 0.00 3.41
4747 5577 3.699067 CTGTGGAGTTTTGTGCTTTCAG 58.301 45.455 0.00 0.00 0.00 3.02
4748 5578 2.159254 GCTGTGGAGTTTTGTGCTTTCA 60.159 45.455 0.00 0.00 0.00 2.69
4749 5579 2.159254 TGCTGTGGAGTTTTGTGCTTTC 60.159 45.455 0.00 0.00 0.00 2.62
4750 5580 1.824230 TGCTGTGGAGTTTTGTGCTTT 59.176 42.857 0.00 0.00 0.00 3.51
4751 5581 1.473258 TGCTGTGGAGTTTTGTGCTT 58.527 45.000 0.00 0.00 0.00 3.91
4753 5583 2.397549 GATTGCTGTGGAGTTTTGTGC 58.602 47.619 0.00 0.00 0.00 4.57
4754 5584 2.624838 AGGATTGCTGTGGAGTTTTGTG 59.375 45.455 0.00 0.00 0.00 3.33
4756 5586 2.029649 CCAGGATTGCTGTGGAGTTTTG 60.030 50.000 4.39 0.00 32.60 2.44
4757 5587 2.158475 TCCAGGATTGCTGTGGAGTTTT 60.158 45.455 4.39 0.00 35.36 2.43
4758 5588 1.425066 TCCAGGATTGCTGTGGAGTTT 59.575 47.619 4.39 0.00 35.36 2.66
4759 5589 1.067295 TCCAGGATTGCTGTGGAGTT 58.933 50.000 4.39 0.00 35.36 3.01
4760 5590 1.293062 ATCCAGGATTGCTGTGGAGT 58.707 50.000 0.00 0.00 43.61 3.85
4761 5591 2.431954 AATCCAGGATTGCTGTGGAG 57.568 50.000 14.45 0.00 43.61 3.86
4764 5594 4.641541 TGACAATAATCCAGGATTGCTGTG 59.358 41.667 25.24 18.49 36.67 3.66
4765 5595 4.641989 GTGACAATAATCCAGGATTGCTGT 59.358 41.667 23.31 22.74 36.67 4.40
4766 5596 4.885907 AGTGACAATAATCCAGGATTGCTG 59.114 41.667 23.31 20.15 36.67 4.41
4767 5597 5.121380 AGTGACAATAATCCAGGATTGCT 57.879 39.130 23.31 8.84 36.67 3.91
4768 5598 6.543831 AGTTAGTGACAATAATCCAGGATTGC 59.456 38.462 23.31 8.84 36.67 3.56
4769 5599 7.770433 TGAGTTAGTGACAATAATCCAGGATTG 59.230 37.037 23.31 11.84 38.70 2.67
4770 5600 7.770897 GTGAGTTAGTGACAATAATCCAGGATT 59.229 37.037 19.08 19.08 36.20 3.01
4771 5601 7.275920 GTGAGTTAGTGACAATAATCCAGGAT 58.724 38.462 0.00 0.00 0.00 3.24
4772 5602 6.351881 GGTGAGTTAGTGACAATAATCCAGGA 60.352 42.308 0.00 0.00 0.00 3.86
4773 5603 5.817816 GGTGAGTTAGTGACAATAATCCAGG 59.182 44.000 0.00 0.00 0.00 4.45
4776 5606 6.170506 TGTGGTGAGTTAGTGACAATAATCC 58.829 40.000 0.00 1.62 0.00 3.01
4777 5607 7.360946 GGTTGTGGTGAGTTAGTGACAATAATC 60.361 40.741 0.00 0.00 0.00 1.75
4780 5610 5.071250 AGGTTGTGGTGAGTTAGTGACAATA 59.929 40.000 0.00 0.00 0.00 1.90
4781 5611 4.134563 GGTTGTGGTGAGTTAGTGACAAT 58.865 43.478 0.00 0.00 0.00 2.71
4782 5612 3.199071 AGGTTGTGGTGAGTTAGTGACAA 59.801 43.478 0.00 0.00 0.00 3.18
4783 5613 2.769663 AGGTTGTGGTGAGTTAGTGACA 59.230 45.455 0.00 0.00 0.00 3.58
4784 5614 3.391049 GAGGTTGTGGTGAGTTAGTGAC 58.609 50.000 0.00 0.00 0.00 3.67
4786 5616 2.104111 TGGAGGTTGTGGTGAGTTAGTG 59.896 50.000 0.00 0.00 0.00 2.74
4787 5617 2.404559 TGGAGGTTGTGGTGAGTTAGT 58.595 47.619 0.00 0.00 0.00 2.24
4788 5618 3.261897 AGATGGAGGTTGTGGTGAGTTAG 59.738 47.826 0.00 0.00 0.00 2.34
4790 5620 2.039084 GAGATGGAGGTTGTGGTGAGTT 59.961 50.000 0.00 0.00 0.00 3.01
4791 5621 1.625818 GAGATGGAGGTTGTGGTGAGT 59.374 52.381 0.00 0.00 0.00 3.41
4792 5622 1.625315 TGAGATGGAGGTTGTGGTGAG 59.375 52.381 0.00 0.00 0.00 3.51
4793 5623 1.728323 TGAGATGGAGGTTGTGGTGA 58.272 50.000 0.00 0.00 0.00 4.02
4794 5624 2.362736 CATGAGATGGAGGTTGTGGTG 58.637 52.381 0.00 0.00 0.00 4.17
4795 5625 1.340405 GCATGAGATGGAGGTTGTGGT 60.340 52.381 0.00 0.00 0.00 4.16
4796 5626 1.340308 TGCATGAGATGGAGGTTGTGG 60.340 52.381 0.00 0.00 0.00 4.17
4799 5629 2.927028 TGATGCATGAGATGGAGGTTG 58.073 47.619 2.46 0.00 32.88 3.77
4800 5630 3.552875 CTTGATGCATGAGATGGAGGTT 58.447 45.455 2.46 0.00 32.88 3.50
4801 5631 2.748798 GCTTGATGCATGAGATGGAGGT 60.749 50.000 2.46 0.00 42.31 3.85
4802 5632 1.880675 GCTTGATGCATGAGATGGAGG 59.119 52.381 2.46 0.00 42.31 4.30
4814 5644 2.056577 GTGCTTTCAGTTGCTTGATGC 58.943 47.619 0.00 0.00 43.25 3.91
4815 5645 3.358707 TGTGCTTTCAGTTGCTTGATG 57.641 42.857 0.00 0.00 0.00 3.07
4919 5797 2.687935 GTGCAATAAATCCGGTGGATGT 59.312 45.455 0.00 0.00 42.27 3.06
4965 5843 1.200760 TCACATGTGAGTGGAGGGGG 61.201 60.000 24.56 0.00 39.93 5.40
4985 5863 2.875672 GCATTGGCAGTGACCTCAACTA 60.876 50.000 14.75 0.00 40.72 2.24
5004 5882 1.003476 TTTGCTCTGGATCGCTGCA 60.003 52.632 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.