Multiple sequence alignment - TraesCS4A01G194400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G194400 chr4A 100.000 2518 0 0 1 2518 476147036 476144519 0.000000e+00 4650
1 TraesCS4A01G194400 chr4D 93.918 1299 52 12 533 1820 100319395 100320677 0.000000e+00 1936
2 TraesCS4A01G194400 chr4D 87.821 468 50 6 1 464 100318911 100319375 2.200000e-150 542
3 TraesCS4A01G194400 chr4D 82.968 411 47 12 2044 2449 100329789 100330181 1.430000e-92 350
4 TraesCS4A01G194400 chr4B 94.157 890 42 4 531 1415 142540958 142541842 0.000000e+00 1347
5 TraesCS4A01G194400 chr4B 92.115 558 35 8 1446 2000 142541839 142542390 0.000000e+00 778
6 TraesCS4A01G194400 chr4B 84.636 742 65 22 1 717 142539590 142540307 0.000000e+00 693
7 TraesCS4A01G194400 chr4B 89.498 219 20 1 2041 2256 142643859 142644077 8.870000e-70 274
8 TraesCS4A01G194400 chr4B 89.950 199 18 1 2254 2452 142670822 142671018 3.210000e-64 255


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G194400 chr4A 476144519 476147036 2517 True 4650.000000 4650 100.000000 1 2518 1 chr4A.!!$R1 2517
1 TraesCS4A01G194400 chr4D 100318911 100320677 1766 False 1239.000000 1936 90.869500 1 1820 2 chr4D.!!$F2 1819
2 TraesCS4A01G194400 chr4B 142539590 142542390 2800 False 939.333333 1347 90.302667 1 2000 3 chr4B.!!$F3 1999

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
473 497 0.032815 GGAGGAGCTGTAGGATTCGC 59.967 60.0 0.0 0.0 0.0 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2346 3219 0.033306 TGGCTGCATTTATGAGCCCA 60.033 50.0 20.53 9.6 43.87 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 23 0.254178 GGGCCTCTTCAGCTTCATCA 59.746 55.000 0.84 0.00 0.00 3.07
20 24 1.340405 GGGCCTCTTCAGCTTCATCAA 60.340 52.381 0.84 0.00 0.00 2.57
42 47 0.616111 CTCCCCACTGGTAGCTCACT 60.616 60.000 0.00 0.00 34.77 3.41
55 60 2.731572 AGCTCACTTGGAAATCATGGG 58.268 47.619 0.00 0.00 0.00 4.00
57 62 1.402968 CTCACTTGGAAATCATGGGCG 59.597 52.381 0.00 0.00 0.00 6.13
59 64 0.323725 ACTTGGAAATCATGGGCGCT 60.324 50.000 7.64 0.00 0.00 5.92
64 69 1.066929 GGAAATCATGGGCGCTTTTGT 60.067 47.619 7.64 0.00 0.00 2.83
65 70 1.994779 GAAATCATGGGCGCTTTTGTG 59.005 47.619 7.64 0.00 0.00 3.33
75 80 3.066380 GGCGCTTTTGTGGATCAAATTT 58.934 40.909 7.64 0.00 44.15 1.82
97 102 3.033184 CTTGGCTCGTGCTGCAAA 58.967 55.556 2.77 0.00 39.59 3.68
119 124 3.948719 GTGTTGGACGGCCCCTCA 61.949 66.667 3.83 0.00 0.00 3.86
133 138 0.904865 CCCTCACCTGGCTAGACACA 60.905 60.000 0.00 0.00 0.00 3.72
156 161 1.273606 CTTCCTCATCACACGTCCTGT 59.726 52.381 0.00 0.00 0.00 4.00
158 163 0.108615 CCTCATCACACGTCCTGTCC 60.109 60.000 0.00 0.00 0.00 4.02
159 164 0.603065 CTCATCACACGTCCTGTCCA 59.397 55.000 0.00 0.00 0.00 4.02
160 165 0.603065 TCATCACACGTCCTGTCCAG 59.397 55.000 0.00 0.00 0.00 3.86
161 166 1.016130 CATCACACGTCCTGTCCAGC 61.016 60.000 0.00 0.00 0.00 4.85
162 167 2.172483 ATCACACGTCCTGTCCAGCC 62.172 60.000 0.00 0.00 0.00 4.85
163 168 2.524394 ACACGTCCTGTCCAGCCT 60.524 61.111 0.00 0.00 0.00 4.58
164 169 2.047844 CACGTCCTGTCCAGCCTG 60.048 66.667 0.00 0.00 0.00 4.85
168 173 3.005539 TCCTGTCCAGCCTGCTCC 61.006 66.667 0.00 0.00 0.00 4.70
179 184 4.007644 CTGCTCCGTGACCAGGCA 62.008 66.667 0.00 0.00 0.00 4.75
241 246 2.594654 CGAGACAAATCTAGCACGACAC 59.405 50.000 0.00 0.00 34.34 3.67
256 261 3.780624 ACACTTTCGCTTGGTGTCT 57.219 47.368 0.00 0.00 39.59 3.41
284 289 4.323477 CGGGTTCCCTCGCCACAA 62.323 66.667 6.31 0.00 0.00 3.33
285 290 2.114411 GGGTTCCCTCGCCACAAA 59.886 61.111 0.00 0.00 0.00 2.83
288 293 1.614850 GGGTTCCCTCGCCACAAAATA 60.615 52.381 0.00 0.00 0.00 1.40
289 294 2.375146 GGTTCCCTCGCCACAAAATAT 58.625 47.619 0.00 0.00 0.00 1.28
300 305 5.296780 TCGCCACAAAATATCTTTCTGGATC 59.703 40.000 8.04 0.00 29.33 3.36
309 314 0.321564 CTTTCTGGATCGGTGGCACA 60.322 55.000 20.82 0.00 0.00 4.57
325 330 2.415090 GGCACACTACGTACGATTCAGT 60.415 50.000 24.41 15.29 0.00 3.41
328 333 3.126514 CACACTACGTACGATTCAGTCCT 59.873 47.826 24.41 0.00 0.00 3.85
340 345 0.835971 TCAGTCCTGGCAGCCTACAA 60.836 55.000 14.15 0.00 0.00 2.41
355 360 2.742589 CCTACAAGAAAGGCGTTTCCTC 59.257 50.000 24.24 4.88 46.94 3.71
372 377 2.159366 TCCTCGCTCATTCTTCTCGTTC 60.159 50.000 0.00 0.00 0.00 3.95
377 382 2.898705 CTCATTCTTCTCGTTCCCTGG 58.101 52.381 0.00 0.00 0.00 4.45
386 391 2.370519 TCTCGTTCCCTGGTCAATTTGA 59.629 45.455 0.00 0.00 0.00 2.69
413 418 1.685302 GCAATTCGTGCGTGTTTGAT 58.315 45.000 7.60 0.00 45.10 2.57
423 428 1.943968 GCGTGTTTGATGGAGGCACTA 60.944 52.381 0.00 0.00 41.55 2.74
425 430 2.084546 GTGTTTGATGGAGGCACTACC 58.915 52.381 0.00 0.00 39.75 3.18
435 440 3.775654 GCACTACCTCCAGCGCCT 61.776 66.667 2.29 0.00 0.00 5.52
464 470 0.326048 ATGCTACCAGGAGGAGCTGT 60.326 55.000 12.19 0.00 38.27 4.40
469 493 0.639392 ACCAGGAGGAGCTGTAGGAT 59.361 55.000 0.00 0.00 38.69 3.24
471 495 1.691434 CCAGGAGGAGCTGTAGGATTC 59.309 57.143 0.00 0.00 36.89 2.52
472 496 1.339610 CAGGAGGAGCTGTAGGATTCG 59.660 57.143 0.00 0.00 0.00 3.34
473 497 0.032815 GGAGGAGCTGTAGGATTCGC 59.967 60.000 0.00 0.00 0.00 4.70
478 502 0.539051 AGCTGTAGGATTCGCAAGCT 59.461 50.000 0.00 0.00 37.18 3.74
547 1407 3.254657 CCTGCTCGAGAAGTCCTAATAGG 59.745 52.174 19.35 0.00 36.46 2.57
549 1409 4.279145 TGCTCGAGAAGTCCTAATAGGTT 58.721 43.478 18.75 0.00 36.53 3.50
628 1488 0.826715 AGCTCGTGACCTATGTGCAT 59.173 50.000 0.00 0.00 37.28 3.96
633 1493 1.405391 CGTGACCTATGTGCATGGTGA 60.405 52.381 8.09 0.00 33.74 4.02
657 1517 2.883730 GGCTTCGTCGCGTATGCA 60.884 61.111 5.77 0.00 42.97 3.96
719 1579 7.038154 ACTGCAGAGATAAGTGAAGAGATAC 57.962 40.000 23.35 0.00 0.00 2.24
720 1580 6.066054 TGCAGAGATAAGTGAAGAGATACG 57.934 41.667 0.00 0.00 0.00 3.06
721 1581 5.590663 TGCAGAGATAAGTGAAGAGATACGT 59.409 40.000 0.00 0.00 0.00 3.57
722 1582 6.766467 TGCAGAGATAAGTGAAGAGATACGTA 59.234 38.462 0.00 0.00 0.00 3.57
859 1721 7.273381 TCCGCGTAGTAATAACTGTTTTCTTAC 59.727 37.037 4.92 5.49 36.36 2.34
872 1734 0.971386 TTCTTACCAGTCGACCACCC 59.029 55.000 13.01 0.00 0.00 4.61
893 1755 3.258622 CCGGCCCAAAACCACTATAAAAA 59.741 43.478 0.00 0.00 0.00 1.94
906 1768 5.368989 CACTATAAAAACCCTCCTAGCCAG 58.631 45.833 0.00 0.00 0.00 4.85
916 1778 1.141858 CTCCTAGCCAGTCCCCAAATC 59.858 57.143 0.00 0.00 0.00 2.17
935 1797 0.319728 CCTCACCCACTCACTCACAG 59.680 60.000 0.00 0.00 0.00 3.66
1248 2112 1.149174 CAAGACCACCTGCACCTGT 59.851 57.895 0.00 0.00 0.00 4.00
1397 2261 2.292267 CCAGTTGCCCTAATGCTACAG 58.708 52.381 0.00 0.00 39.07 2.74
1400 2264 2.025887 AGTTGCCCTAATGCTACAGCTT 60.026 45.455 2.44 0.00 42.66 3.74
1411 2275 6.502136 AATGCTACAGCTTTAGGACTTTTC 57.498 37.500 8.92 0.00 42.66 2.29
1440 2304 8.990203 AGATCTATATGATTACATGCATGGACT 58.010 33.333 29.41 16.87 37.87 3.85
1441 2305 8.959705 ATCTATATGATTACATGCATGGACTG 57.040 34.615 29.41 7.20 37.87 3.51
1442 2306 8.137745 TCTATATGATTACATGCATGGACTGA 57.862 34.615 29.41 11.42 37.87 3.41
1443 2307 8.765517 TCTATATGATTACATGCATGGACTGAT 58.234 33.333 29.41 17.82 37.87 2.90
1528 2393 3.070060 GCGTTAAGCGTGAGACCG 58.930 61.111 0.00 0.00 43.66 4.79
1575 2440 2.096819 GCGAAATAAATCGTGGAAGCCA 59.903 45.455 0.00 0.00 44.49 4.75
1601 2466 4.746309 TGCTGCATGGCTCCACCC 62.746 66.667 0.00 0.00 37.83 4.61
1607 2472 2.035626 ATGGCTCCACCCCGTTTG 59.964 61.111 0.00 0.00 37.83 2.93
1672 2544 0.532115 TACTGCTGCTGCTTCGATCA 59.468 50.000 17.00 0.00 40.48 2.92
1686 2558 0.526739 CGATCATACGTTGTGGCCGA 60.527 55.000 0.00 0.00 0.00 5.54
1687 2559 1.865865 GATCATACGTTGTGGCCGAT 58.134 50.000 0.00 0.00 0.00 4.18
1749 2621 2.158667 ACCTCGTGTCCTTTGTTGGAAT 60.159 45.455 0.00 0.00 37.93 3.01
1751 2623 3.058224 CCTCGTGTCCTTTGTTGGAATTC 60.058 47.826 0.00 0.00 37.93 2.17
1821 2694 6.388619 ACAGGGTCCTTTAATAATGTCAGT 57.611 37.500 0.00 0.00 0.00 3.41
1825 2698 7.993183 CAGGGTCCTTTAATAATGTCAGTATGT 59.007 37.037 0.00 0.00 37.40 2.29
1826 2699 8.211629 AGGGTCCTTTAATAATGTCAGTATGTC 58.788 37.037 0.00 0.00 37.40 3.06
1852 2725 2.355009 GGTTTGCACGCAGCCAAG 60.355 61.111 9.06 0.00 44.83 3.61
1855 2728 1.226916 TTTGCACGCAGCCAAGTTG 60.227 52.632 0.00 0.00 44.83 3.16
1879 2752 5.135508 TCTCCTACTTCGTTCAAGAAAGG 57.864 43.478 0.00 0.00 38.85 3.11
1886 2759 2.137523 TCGTTCAAGAAAGGGTAACGC 58.862 47.619 0.00 0.00 41.86 4.84
1902 2775 4.386652 GGTAACGCTTGAGACATTAACGAA 59.613 41.667 0.00 0.00 0.00 3.85
1911 2784 8.398665 GCTTGAGACATTAACGAAATCCTTATT 58.601 33.333 0.00 0.00 0.00 1.40
1959 2832 8.944212 ATTTTAAAAGTATTTCCGTTGAGACG 57.056 30.769 6.79 0.00 43.13 4.18
1960 2833 7.712264 TTTAAAAGTATTTCCGTTGAGACGA 57.288 32.000 0.00 0.00 45.18 4.20
1961 2834 7.894376 TTAAAAGTATTTCCGTTGAGACGAT 57.106 32.000 0.00 0.00 45.18 3.73
1964 2837 5.809051 AAAGTATTTCCGTTGAGACGATACC 59.191 40.000 0.00 0.00 43.38 2.73
1966 2839 7.793058 AAAGTATTTCCGTTGAGACGATACCTT 60.793 37.037 0.00 0.00 43.38 3.50
1980 2853 8.179509 AGACGATACCTTGCATACTATTAAGT 57.820 34.615 0.00 0.00 39.91 2.24
2059 2932 8.633075 AAGACAATTTACATCAAACACAAGTG 57.367 30.769 0.00 0.00 0.00 3.16
2060 2933 6.697019 AGACAATTTACATCAAACACAAGTGC 59.303 34.615 0.00 0.00 0.00 4.40
2061 2934 6.336566 ACAATTTACATCAAACACAAGTGCA 58.663 32.000 0.00 0.00 0.00 4.57
2062 2935 6.985645 ACAATTTACATCAAACACAAGTGCAT 59.014 30.769 0.00 0.00 0.00 3.96
2063 2936 8.140628 ACAATTTACATCAAACACAAGTGCATA 58.859 29.630 0.00 0.00 0.00 3.14
2064 2937 9.142515 CAATTTACATCAAACACAAGTGCATAT 57.857 29.630 0.00 0.00 0.00 1.78
2069 2942 8.962884 ACATCAAACACAAGTGCATATATAGA 57.037 30.769 0.00 0.00 0.00 1.98
2070 2943 9.394767 ACATCAAACACAAGTGCATATATAGAA 57.605 29.630 0.00 0.00 0.00 2.10
2077 2950 9.448438 ACACAAGTGCATATATAGAAAAGTTCA 57.552 29.630 0.00 0.00 0.00 3.18
2078 2951 9.926751 CACAAGTGCATATATAGAAAAGTTCAG 57.073 33.333 0.00 0.00 0.00 3.02
2079 2952 9.890629 ACAAGTGCATATATAGAAAAGTTCAGA 57.109 29.630 0.00 0.00 0.00 3.27
2081 2954 9.890629 AAGTGCATATATAGAAAAGTTCAGACA 57.109 29.630 0.00 0.00 0.00 3.41
2082 2955 9.319143 AGTGCATATATAGAAAAGTTCAGACAC 57.681 33.333 0.00 0.00 0.00 3.67
2083 2956 9.098355 GTGCATATATAGAAAAGTTCAGACACA 57.902 33.333 0.00 0.00 0.00 3.72
2084 2957 9.665719 TGCATATATAGAAAAGTTCAGACACAA 57.334 29.630 0.00 0.00 0.00 3.33
2088 2961 6.793492 ATAGAAAAGTTCAGACACAAGCTC 57.207 37.500 0.00 0.00 0.00 4.09
2089 2962 4.517285 AGAAAAGTTCAGACACAAGCTCA 58.483 39.130 0.00 0.00 0.00 4.26
2090 2963 4.333926 AGAAAAGTTCAGACACAAGCTCAC 59.666 41.667 0.00 0.00 0.00 3.51
2091 2964 2.988010 AGTTCAGACACAAGCTCACA 57.012 45.000 0.00 0.00 0.00 3.58
2092 2965 2.555199 AGTTCAGACACAAGCTCACAC 58.445 47.619 0.00 0.00 0.00 3.82
2093 2966 2.169352 AGTTCAGACACAAGCTCACACT 59.831 45.455 0.00 0.00 0.00 3.55
2094 2967 3.384789 AGTTCAGACACAAGCTCACACTA 59.615 43.478 0.00 0.00 0.00 2.74
2095 2968 3.650070 TCAGACACAAGCTCACACTAG 57.350 47.619 0.00 0.00 0.00 2.57
2096 2969 2.959030 TCAGACACAAGCTCACACTAGT 59.041 45.455 0.00 0.00 0.00 2.57
2098 2971 1.795286 GACACAAGCTCACACTAGTGC 59.205 52.381 22.90 8.83 45.49 4.40
2099 2972 1.138859 ACACAAGCTCACACTAGTGCA 59.861 47.619 22.90 8.79 45.49 4.57
2100 2973 2.224378 ACACAAGCTCACACTAGTGCAT 60.224 45.455 22.90 0.94 45.49 3.96
2101 2974 3.006859 ACACAAGCTCACACTAGTGCATA 59.993 43.478 22.90 7.45 45.49 3.14
2102 2975 4.186926 CACAAGCTCACACTAGTGCATAT 58.813 43.478 22.90 0.00 45.49 1.78
2103 2976 5.105351 ACACAAGCTCACACTAGTGCATATA 60.105 40.000 22.90 3.19 45.49 0.86
2104 2977 5.987953 CACAAGCTCACACTAGTGCATATAT 59.012 40.000 22.90 2.97 45.49 0.86
2105 2978 7.147976 CACAAGCTCACACTAGTGCATATATA 58.852 38.462 22.90 0.09 45.49 0.86
2106 2979 7.328005 CACAAGCTCACACTAGTGCATATATAG 59.672 40.741 22.90 10.25 45.49 1.31
2107 2980 7.231519 ACAAGCTCACACTAGTGCATATATAGA 59.768 37.037 22.90 7.13 45.49 1.98
2108 2981 7.151999 AGCTCACACTAGTGCATATATAGAC 57.848 40.000 22.90 2.01 45.49 2.59
2109 2982 6.717084 AGCTCACACTAGTGCATATATAGACA 59.283 38.462 22.90 0.00 45.49 3.41
2110 2983 7.231519 AGCTCACACTAGTGCATATATAGACAA 59.768 37.037 22.90 0.00 45.49 3.18
2111 2984 7.540400 GCTCACACTAGTGCATATATAGACAAG 59.460 40.741 22.90 4.05 45.49 3.16
2112 2985 8.465273 TCACACTAGTGCATATATAGACAAGT 57.535 34.615 22.90 0.00 45.49 3.16
2113 2986 8.914011 TCACACTAGTGCATATATAGACAAGTT 58.086 33.333 22.90 0.00 45.49 2.66
2114 2987 9.534565 CACACTAGTGCATATATAGACAAGTTT 57.465 33.333 22.90 0.00 39.21 2.66
2115 2988 9.534565 ACACTAGTGCATATATAGACAAGTTTG 57.465 33.333 22.90 0.00 0.00 2.93
2116 2989 8.491152 CACTAGTGCATATATAGACAAGTTTGC 58.509 37.037 10.54 0.00 0.00 3.68
2117 2990 8.204160 ACTAGTGCATATATAGACAAGTTTGCA 58.796 33.333 0.00 0.40 36.58 4.08
2120 2993 7.622893 TGCATATATAGACAAGTTTGCACAA 57.377 32.000 0.00 0.00 34.24 3.33
2121 2994 8.049655 TGCATATATAGACAAGTTTGCACAAA 57.950 30.769 0.00 0.00 34.24 2.83
2122 2995 8.518702 TGCATATATAGACAAGTTTGCACAAAA 58.481 29.630 0.00 0.00 34.24 2.44
2134 3007 6.645700 GTTTGCACAAAACTTCAATGAGAA 57.354 33.333 0.00 0.00 44.10 2.87
2135 3008 6.469322 GTTTGCACAAAACTTCAATGAGAAC 58.531 36.000 0.00 0.00 44.10 3.01
2136 3009 5.581126 TGCACAAAACTTCAATGAGAACT 57.419 34.783 0.00 0.00 31.61 3.01
2137 3010 6.691754 TGCACAAAACTTCAATGAGAACTA 57.308 33.333 0.00 0.00 31.61 2.24
2138 3011 6.728200 TGCACAAAACTTCAATGAGAACTAG 58.272 36.000 0.00 0.00 31.61 2.57
2139 3012 5.626955 GCACAAAACTTCAATGAGAACTAGC 59.373 40.000 0.00 0.00 31.61 3.42
2140 3013 6.728200 CACAAAACTTCAATGAGAACTAGCA 58.272 36.000 0.00 0.00 31.61 3.49
2141 3014 6.634436 CACAAAACTTCAATGAGAACTAGCAC 59.366 38.462 0.00 0.00 31.61 4.40
2142 3015 6.318648 ACAAAACTTCAATGAGAACTAGCACA 59.681 34.615 0.00 0.00 31.61 4.57
2143 3016 7.013655 ACAAAACTTCAATGAGAACTAGCACAT 59.986 33.333 0.00 0.00 31.61 3.21
2144 3017 6.492007 AACTTCAATGAGAACTAGCACATG 57.508 37.500 0.00 0.00 31.61 3.21
2145 3018 5.798132 ACTTCAATGAGAACTAGCACATGA 58.202 37.500 0.00 0.00 31.61 3.07
2146 3019 6.413052 ACTTCAATGAGAACTAGCACATGAT 58.587 36.000 0.00 0.00 31.61 2.45
2147 3020 7.559486 ACTTCAATGAGAACTAGCACATGATA 58.441 34.615 0.00 0.00 31.61 2.15
2148 3021 8.043113 ACTTCAATGAGAACTAGCACATGATAA 58.957 33.333 0.00 0.00 31.61 1.75
2149 3022 8.429493 TTCAATGAGAACTAGCACATGATAAG 57.571 34.615 0.00 0.00 0.00 1.73
2150 3023 7.559486 TCAATGAGAACTAGCACATGATAAGT 58.441 34.615 0.00 0.00 0.00 2.24
2151 3024 7.493645 TCAATGAGAACTAGCACATGATAAGTG 59.506 37.037 0.00 0.00 39.92 3.16
2152 3025 6.286240 TGAGAACTAGCACATGATAAGTGT 57.714 37.500 0.00 0.00 39.17 3.55
2153 3026 7.404671 TGAGAACTAGCACATGATAAGTGTA 57.595 36.000 0.00 0.00 39.17 2.90
2154 3027 7.484140 TGAGAACTAGCACATGATAAGTGTAG 58.516 38.462 0.00 0.00 39.17 2.74
2155 3028 7.339466 TGAGAACTAGCACATGATAAGTGTAGA 59.661 37.037 0.00 0.00 39.17 2.59
2156 3029 7.711846 AGAACTAGCACATGATAAGTGTAGAG 58.288 38.462 0.00 0.00 39.17 2.43
2157 3030 7.558081 AGAACTAGCACATGATAAGTGTAGAGA 59.442 37.037 0.00 0.00 39.17 3.10
2158 3031 7.270757 ACTAGCACATGATAAGTGTAGAGAG 57.729 40.000 0.00 0.00 39.17 3.20
2159 3032 7.057264 ACTAGCACATGATAAGTGTAGAGAGA 58.943 38.462 0.00 0.00 39.17 3.10
2160 3033 6.782082 AGCACATGATAAGTGTAGAGAGAA 57.218 37.500 0.00 0.00 39.17 2.87
2161 3034 6.804677 AGCACATGATAAGTGTAGAGAGAAG 58.195 40.000 0.00 0.00 39.17 2.85
2162 3035 6.605194 AGCACATGATAAGTGTAGAGAGAAGA 59.395 38.462 0.00 0.00 39.17 2.87
2163 3036 6.695278 GCACATGATAAGTGTAGAGAGAAGAC 59.305 42.308 0.00 0.00 39.17 3.01
2164 3037 7.629437 GCACATGATAAGTGTAGAGAGAAGACA 60.629 40.741 0.00 0.00 39.17 3.41
2165 3038 7.914871 CACATGATAAGTGTAGAGAGAAGACAG 59.085 40.741 0.00 0.00 32.44 3.51
2166 3039 7.068103 ACATGATAAGTGTAGAGAGAAGACAGG 59.932 40.741 0.00 0.00 0.00 4.00
2167 3040 6.486056 TGATAAGTGTAGAGAGAAGACAGGT 58.514 40.000 0.00 0.00 0.00 4.00
2168 3041 6.600032 TGATAAGTGTAGAGAGAAGACAGGTC 59.400 42.308 0.00 0.00 0.00 3.85
2169 3042 3.692690 AGTGTAGAGAGAAGACAGGTCC 58.307 50.000 0.00 0.00 0.00 4.46
2170 3043 3.074687 AGTGTAGAGAGAAGACAGGTCCA 59.925 47.826 0.00 0.00 0.00 4.02
2171 3044 3.827302 GTGTAGAGAGAAGACAGGTCCAA 59.173 47.826 0.00 0.00 0.00 3.53
2172 3045 4.281182 GTGTAGAGAGAAGACAGGTCCAAA 59.719 45.833 0.00 0.00 0.00 3.28
2173 3046 4.899457 TGTAGAGAGAAGACAGGTCCAAAA 59.101 41.667 0.00 0.00 0.00 2.44
2174 3047 4.615588 AGAGAGAAGACAGGTCCAAAAG 57.384 45.455 0.00 0.00 0.00 2.27
2175 3048 3.326297 AGAGAGAAGACAGGTCCAAAAGG 59.674 47.826 0.00 0.00 0.00 3.11
2176 3049 3.318313 AGAGAAGACAGGTCCAAAAGGA 58.682 45.455 0.00 0.00 0.00 3.36
2177 3050 3.716872 AGAGAAGACAGGTCCAAAAGGAA 59.283 43.478 0.00 0.00 0.00 3.36
2178 3051 3.815962 GAGAAGACAGGTCCAAAAGGAAC 59.184 47.826 0.00 0.00 0.00 3.62
2179 3052 2.256117 AGACAGGTCCAAAAGGAACG 57.744 50.000 0.00 0.00 0.00 3.95
2180 3053 1.766496 AGACAGGTCCAAAAGGAACGA 59.234 47.619 0.00 0.00 0.00 3.85
2181 3054 2.171870 AGACAGGTCCAAAAGGAACGAA 59.828 45.455 0.00 0.00 0.00 3.85
2182 3055 2.946990 GACAGGTCCAAAAGGAACGAAA 59.053 45.455 0.00 0.00 0.00 3.46
2183 3056 3.358118 ACAGGTCCAAAAGGAACGAAAA 58.642 40.909 0.00 0.00 0.00 2.29
2184 3057 3.764972 ACAGGTCCAAAAGGAACGAAAAA 59.235 39.130 0.00 0.00 0.00 1.94
2207 3080 8.761575 AAAACCTATCAAATGCATTACAAGTG 57.238 30.769 13.39 7.05 0.00 3.16
2208 3081 7.466746 AACCTATCAAATGCATTACAAGTGT 57.533 32.000 13.39 4.17 0.00 3.55
2209 3082 7.466746 ACCTATCAAATGCATTACAAGTGTT 57.533 32.000 13.39 4.76 0.00 3.32
2210 3083 7.315142 ACCTATCAAATGCATTACAAGTGTTG 58.685 34.615 13.39 4.74 0.00 3.33
2211 3084 7.176515 ACCTATCAAATGCATTACAAGTGTTGA 59.823 33.333 13.39 10.32 0.00 3.18
2212 3085 7.485913 CCTATCAAATGCATTACAAGTGTTGAC 59.514 37.037 13.39 0.00 0.00 3.18
2213 3086 5.211454 TCAAATGCATTACAAGTGTTGACG 58.789 37.500 13.39 0.00 0.00 4.35
2214 3087 3.829886 ATGCATTACAAGTGTTGACGG 57.170 42.857 0.00 0.00 0.00 4.79
2215 3088 1.265635 TGCATTACAAGTGTTGACGGC 59.734 47.619 0.00 0.00 0.00 5.68
2216 3089 1.265635 GCATTACAAGTGTTGACGGCA 59.734 47.619 0.00 0.00 0.00 5.69
2217 3090 2.287308 GCATTACAAGTGTTGACGGCAA 60.287 45.455 0.00 0.00 0.00 4.52
2218 3091 3.611530 GCATTACAAGTGTTGACGGCAAT 60.612 43.478 7.13 0.00 36.22 3.56
2219 3092 3.617540 TTACAAGTGTTGACGGCAATG 57.382 42.857 7.13 3.37 36.22 2.82
2220 3093 1.388547 ACAAGTGTTGACGGCAATGT 58.611 45.000 7.13 4.17 36.22 2.71
2221 3094 1.065401 ACAAGTGTTGACGGCAATGTG 59.935 47.619 7.13 5.79 36.22 3.21
2222 3095 1.065401 CAAGTGTTGACGGCAATGTGT 59.935 47.619 7.13 0.00 36.22 3.72
2223 3096 2.248280 AGTGTTGACGGCAATGTGTA 57.752 45.000 7.13 0.00 36.22 2.90
2224 3097 1.871039 AGTGTTGACGGCAATGTGTAC 59.129 47.619 7.13 2.03 36.22 2.90
2225 3098 1.600013 GTGTTGACGGCAATGTGTACA 59.400 47.619 7.13 0.00 36.22 2.90
2226 3099 2.225491 GTGTTGACGGCAATGTGTACAT 59.775 45.455 7.13 0.00 36.22 2.29
2227 3100 2.482336 TGTTGACGGCAATGTGTACATC 59.518 45.455 7.13 0.00 36.22 3.06
2228 3101 1.355005 TGACGGCAATGTGTACATCG 58.645 50.000 0.00 1.04 35.10 3.84
2229 3102 1.067495 TGACGGCAATGTGTACATCGA 60.067 47.619 0.00 0.00 35.10 3.59
2230 3103 2.201732 GACGGCAATGTGTACATCGAT 58.798 47.619 0.00 0.00 35.10 3.59
2231 3104 2.201732 ACGGCAATGTGTACATCGATC 58.798 47.619 0.00 0.00 35.10 3.69
2232 3105 2.200899 CGGCAATGTGTACATCGATCA 58.799 47.619 0.00 0.00 35.10 2.92
2233 3106 2.607180 CGGCAATGTGTACATCGATCAA 59.393 45.455 0.00 0.00 35.10 2.57
2234 3107 3.063316 CGGCAATGTGTACATCGATCAAA 59.937 43.478 0.00 0.00 35.10 2.69
2235 3108 4.591202 GGCAATGTGTACATCGATCAAAG 58.409 43.478 0.00 0.00 35.10 2.77
2236 3109 4.332543 GGCAATGTGTACATCGATCAAAGA 59.667 41.667 0.00 0.00 35.10 2.52
2237 3110 5.258622 GCAATGTGTACATCGATCAAAGAC 58.741 41.667 0.00 0.00 35.10 3.01
2238 3111 5.163864 GCAATGTGTACATCGATCAAAGACA 60.164 40.000 0.00 0.00 35.10 3.41
2239 3112 6.457392 GCAATGTGTACATCGATCAAAGACAT 60.457 38.462 0.00 1.64 35.10 3.06
2240 3113 6.834959 ATGTGTACATCGATCAAAGACATC 57.165 37.500 0.00 0.00 28.78 3.06
2241 3114 5.109210 TGTGTACATCGATCAAAGACATCC 58.891 41.667 0.00 0.00 0.00 3.51
2242 3115 4.207224 GTGTACATCGATCAAAGACATCCG 59.793 45.833 0.00 0.00 0.00 4.18
2243 3116 2.205074 ACATCGATCAAAGACATCCGC 58.795 47.619 0.00 0.00 0.00 5.54
2244 3117 2.204237 CATCGATCAAAGACATCCGCA 58.796 47.619 0.00 0.00 0.00 5.69
2245 3118 2.378445 TCGATCAAAGACATCCGCAA 57.622 45.000 0.00 0.00 0.00 4.85
2246 3119 2.905075 TCGATCAAAGACATCCGCAAT 58.095 42.857 0.00 0.00 0.00 3.56
2247 3120 2.609002 TCGATCAAAGACATCCGCAATG 59.391 45.455 0.00 0.00 41.48 2.82
2248 3121 2.724349 GATCAAAGACATCCGCAATGC 58.276 47.619 0.00 0.00 39.12 3.56
2249 3122 1.532523 TCAAAGACATCCGCAATGCA 58.467 45.000 5.91 0.00 39.12 3.96
2250 3123 1.885233 TCAAAGACATCCGCAATGCAA 59.115 42.857 5.91 0.00 39.12 4.08
2251 3124 2.295629 TCAAAGACATCCGCAATGCAAA 59.704 40.909 5.91 0.00 39.12 3.68
2252 3125 2.352503 AAGACATCCGCAATGCAAAC 57.647 45.000 5.91 0.00 39.12 2.93
2253 3126 1.246649 AGACATCCGCAATGCAAACA 58.753 45.000 5.91 0.00 39.12 2.83
2254 3127 1.820519 AGACATCCGCAATGCAAACAT 59.179 42.857 5.91 0.00 39.12 2.71
2255 3128 3.016031 AGACATCCGCAATGCAAACATA 58.984 40.909 5.91 0.00 39.12 2.29
2256 3129 3.633525 AGACATCCGCAATGCAAACATAT 59.366 39.130 5.91 0.00 39.12 1.78
2257 3130 4.098349 AGACATCCGCAATGCAAACATATT 59.902 37.500 5.91 0.00 39.12 1.28
2258 3131 5.299028 AGACATCCGCAATGCAAACATATTA 59.701 36.000 5.91 0.00 39.12 0.98
2259 3132 5.900425 ACATCCGCAATGCAAACATATTAA 58.100 33.333 5.91 0.00 39.12 1.40
2260 3133 6.336566 ACATCCGCAATGCAAACATATTAAA 58.663 32.000 5.91 0.00 39.12 1.52
2261 3134 6.985645 ACATCCGCAATGCAAACATATTAAAT 59.014 30.769 5.91 0.00 39.12 1.40
2262 3135 6.825284 TCCGCAATGCAAACATATTAAATG 57.175 33.333 5.91 0.00 34.62 2.32
2263 3136 6.567959 TCCGCAATGCAAACATATTAAATGA 58.432 32.000 5.91 0.00 34.62 2.57
2264 3137 7.038048 TCCGCAATGCAAACATATTAAATGAA 58.962 30.769 5.91 0.00 34.62 2.57
2265 3138 7.547019 TCCGCAATGCAAACATATTAAATGAAA 59.453 29.630 5.91 0.00 34.62 2.69
2266 3139 8.336806 CCGCAATGCAAACATATTAAATGAAAT 58.663 29.630 5.91 0.00 34.62 2.17
2267 3140 9.705471 CGCAATGCAAACATATTAAATGAAATT 57.295 25.926 5.91 0.00 34.22 1.82
2284 3157 7.807977 ATGAAATTCATAATGCCGAGTAAGT 57.192 32.000 6.70 0.00 34.88 2.24
2285 3158 7.624360 TGAAATTCATAATGCCGAGTAAGTT 57.376 32.000 0.00 0.00 0.00 2.66
2286 3159 8.050778 TGAAATTCATAATGCCGAGTAAGTTT 57.949 30.769 0.00 0.00 0.00 2.66
2287 3160 8.181573 TGAAATTCATAATGCCGAGTAAGTTTC 58.818 33.333 0.00 0.00 0.00 2.78
2288 3161 6.619801 ATTCATAATGCCGAGTAAGTTTCC 57.380 37.500 0.00 0.00 0.00 3.13
2289 3162 5.092554 TCATAATGCCGAGTAAGTTTCCA 57.907 39.130 0.00 0.00 0.00 3.53
2290 3163 5.492895 TCATAATGCCGAGTAAGTTTCCAA 58.507 37.500 0.00 0.00 0.00 3.53
2291 3164 5.941058 TCATAATGCCGAGTAAGTTTCCAAA 59.059 36.000 0.00 0.00 0.00 3.28
2292 3165 6.431543 TCATAATGCCGAGTAAGTTTCCAAAA 59.568 34.615 0.00 0.00 0.00 2.44
2293 3166 3.974871 TGCCGAGTAAGTTTCCAAAAC 57.025 42.857 0.00 0.00 0.00 2.43
2294 3167 2.288458 TGCCGAGTAAGTTTCCAAAACG 59.712 45.455 0.00 0.00 0.00 3.60
2295 3168 2.350102 GCCGAGTAAGTTTCCAAAACGG 60.350 50.000 0.00 0.00 40.60 4.44
2296 3169 3.132925 CCGAGTAAGTTTCCAAAACGGA 58.867 45.455 0.00 0.00 44.40 4.69
2297 3170 3.749609 CCGAGTAAGTTTCCAAAACGGAT 59.250 43.478 0.00 0.00 45.80 4.18
2298 3171 4.214758 CCGAGTAAGTTTCCAAAACGGATT 59.785 41.667 0.00 0.00 45.80 3.01
2299 3172 5.409214 CCGAGTAAGTTTCCAAAACGGATTA 59.591 40.000 0.00 0.00 45.80 1.75
2300 3173 6.073112 CCGAGTAAGTTTCCAAAACGGATTAA 60.073 38.462 0.00 0.00 45.80 1.40
2301 3174 7.361457 CCGAGTAAGTTTCCAAAACGGATTAAT 60.361 37.037 0.00 0.00 45.80 1.40
2302 3175 8.658609 CGAGTAAGTTTCCAAAACGGATTAATA 58.341 33.333 0.00 0.00 45.80 0.98
2303 3176 9.764870 GAGTAAGTTTCCAAAACGGATTAATAC 57.235 33.333 0.00 0.00 45.80 1.89
2304 3177 9.287373 AGTAAGTTTCCAAAACGGATTAATACA 57.713 29.630 0.00 0.00 45.80 2.29
2305 3178 9.333497 GTAAGTTTCCAAAACGGATTAATACAC 57.667 33.333 0.00 0.00 45.80 2.90
2306 3179 7.513371 AGTTTCCAAAACGGATTAATACACA 57.487 32.000 0.00 0.00 45.80 3.72
2307 3180 7.942990 AGTTTCCAAAACGGATTAATACACAA 58.057 30.769 0.00 0.00 45.80 3.33
2308 3181 8.414778 AGTTTCCAAAACGGATTAATACACAAA 58.585 29.630 0.00 0.00 45.80 2.83
2309 3182 9.032420 GTTTCCAAAACGGATTAATACACAAAA 57.968 29.630 0.00 0.00 45.80 2.44
2310 3183 9.595823 TTTCCAAAACGGATTAATACACAAAAA 57.404 25.926 0.00 0.00 45.80 1.94
2311 3184 9.765795 TTCCAAAACGGATTAATACACAAAAAT 57.234 25.926 0.00 0.00 45.80 1.82
2312 3185 9.197694 TCCAAAACGGATTAATACACAAAAATG 57.802 29.630 0.00 0.00 39.64 2.32
2313 3186 8.439286 CCAAAACGGATTAATACACAAAAATGG 58.561 33.333 0.00 0.00 36.56 3.16
2314 3187 8.439286 CAAAACGGATTAATACACAAAAATGGG 58.561 33.333 0.00 0.00 0.00 4.00
2315 3188 5.656480 ACGGATTAATACACAAAAATGGGC 58.344 37.500 0.00 0.00 0.00 5.36
2316 3189 5.047188 CGGATTAATACACAAAAATGGGCC 58.953 41.667 0.00 0.00 0.00 5.80
2317 3190 5.394663 CGGATTAATACACAAAAATGGGCCA 60.395 40.000 9.61 9.61 0.00 5.36
2318 3191 6.591001 GGATTAATACACAAAAATGGGCCAT 58.409 36.000 14.78 14.78 0.00 4.40
2319 3192 7.053498 GGATTAATACACAAAAATGGGCCATT 58.947 34.615 25.94 25.94 35.39 3.16
2320 3193 7.555914 GGATTAATACACAAAAATGGGCCATTT 59.444 33.333 33.47 33.47 44.62 2.32
2321 3194 7.678947 TTAATACACAAAAATGGGCCATTTG 57.321 32.000 37.70 30.62 42.32 2.32
2322 3195 2.861274 ACACAAAAATGGGCCATTTGG 58.139 42.857 37.70 32.52 42.32 3.28
2334 3207 2.933495 CCATTTGGCTCATGTCACAG 57.067 50.000 0.00 0.00 0.00 3.66
2335 3208 2.439409 CCATTTGGCTCATGTCACAGA 58.561 47.619 0.00 0.00 0.00 3.41
2336 3209 2.821378 CCATTTGGCTCATGTCACAGAA 59.179 45.455 0.00 0.00 0.00 3.02
2337 3210 3.256383 CCATTTGGCTCATGTCACAGAAA 59.744 43.478 0.00 0.00 0.00 2.52
2338 3211 4.081862 CCATTTGGCTCATGTCACAGAAAT 60.082 41.667 0.00 0.00 0.00 2.17
2339 3212 4.508461 TTTGGCTCATGTCACAGAAATG 57.492 40.909 0.00 0.00 0.00 2.32
2340 3213 3.421919 TGGCTCATGTCACAGAAATGA 57.578 42.857 0.38 0.38 34.31 2.57
2341 3214 3.753815 TGGCTCATGTCACAGAAATGAA 58.246 40.909 1.89 0.00 36.07 2.57
2342 3215 3.503363 TGGCTCATGTCACAGAAATGAAC 59.497 43.478 1.89 0.00 36.07 3.18
2343 3216 3.119708 GGCTCATGTCACAGAAATGAACC 60.120 47.826 4.37 4.37 36.07 3.62
2344 3217 3.503363 GCTCATGTCACAGAAATGAACCA 59.497 43.478 1.89 0.00 36.07 3.67
2345 3218 4.157289 GCTCATGTCACAGAAATGAACCAT 59.843 41.667 1.89 0.00 36.07 3.55
2346 3219 5.336213 GCTCATGTCACAGAAATGAACCATT 60.336 40.000 1.89 0.00 36.07 3.16
2347 3220 6.016213 TCATGTCACAGAAATGAACCATTG 57.984 37.500 0.00 0.00 33.84 2.82
2348 3221 4.852134 TGTCACAGAAATGAACCATTGG 57.148 40.909 0.00 0.00 34.04 3.16
2349 3222 3.573538 TGTCACAGAAATGAACCATTGGG 59.426 43.478 7.78 0.00 34.04 4.12
2350 3223 2.562298 TCACAGAAATGAACCATTGGGC 59.438 45.455 7.78 0.00 37.90 5.36
2351 3224 2.564062 CACAGAAATGAACCATTGGGCT 59.436 45.455 7.78 0.00 37.90 5.19
2352 3225 2.827921 ACAGAAATGAACCATTGGGCTC 59.172 45.455 7.78 3.97 37.90 4.70
2353 3226 2.827322 CAGAAATGAACCATTGGGCTCA 59.173 45.455 7.78 9.69 43.14 4.26
2355 3228 4.646040 CAGAAATGAACCATTGGGCTCATA 59.354 41.667 17.97 0.00 46.74 2.15
2356 3229 5.127519 CAGAAATGAACCATTGGGCTCATAA 59.872 40.000 17.97 0.00 46.74 1.90
2357 3230 5.721000 AGAAATGAACCATTGGGCTCATAAA 59.279 36.000 17.97 0.00 46.74 1.40
2358 3231 6.384886 AGAAATGAACCATTGGGCTCATAAAT 59.615 34.615 17.97 10.62 46.74 1.40
2359 3232 5.540400 ATGAACCATTGGGCTCATAAATG 57.460 39.130 16.76 0.00 45.85 2.32
2360 3233 3.132646 TGAACCATTGGGCTCATAAATGC 59.867 43.478 7.78 0.00 34.38 3.56
2361 3234 2.749600 ACCATTGGGCTCATAAATGCA 58.250 42.857 7.78 0.00 37.90 3.96
2362 3235 2.696707 ACCATTGGGCTCATAAATGCAG 59.303 45.455 7.78 0.00 37.90 4.41
2363 3236 2.547218 CCATTGGGCTCATAAATGCAGC 60.547 50.000 0.00 0.00 33.30 5.25
2364 3237 1.113788 TTGGGCTCATAAATGCAGCC 58.886 50.000 17.86 17.86 43.81 4.85
2365 3238 0.033306 TGGGCTCATAAATGCAGCCA 60.033 50.000 23.13 13.38 45.06 4.75
2366 3239 1.335145 GGGCTCATAAATGCAGCCAT 58.665 50.000 23.13 0.00 45.06 4.40
2367 3240 1.000506 GGGCTCATAAATGCAGCCATG 59.999 52.381 23.13 5.69 45.06 3.66
2368 3241 1.000506 GGCTCATAAATGCAGCCATGG 59.999 52.381 19.73 7.63 43.90 3.66
2369 3242 1.958579 GCTCATAAATGCAGCCATGGA 59.041 47.619 18.40 0.00 0.00 3.41
2370 3243 2.363038 GCTCATAAATGCAGCCATGGAA 59.637 45.455 18.40 0.00 0.00 3.53
2371 3244 3.006537 GCTCATAAATGCAGCCATGGAAT 59.993 43.478 18.40 0.00 0.00 3.01
2372 3245 4.806330 CTCATAAATGCAGCCATGGAATC 58.194 43.478 18.40 3.06 0.00 2.52
2373 3246 4.216708 TCATAAATGCAGCCATGGAATCA 58.783 39.130 18.40 9.36 0.00 2.57
2374 3247 4.650131 TCATAAATGCAGCCATGGAATCAA 59.350 37.500 18.40 0.00 0.00 2.57
2375 3248 3.985019 AAATGCAGCCATGGAATCAAA 57.015 38.095 18.40 0.00 0.00 2.69
2376 3249 3.985019 AATGCAGCCATGGAATCAAAA 57.015 38.095 18.40 0.00 0.00 2.44
2377 3250 3.985019 ATGCAGCCATGGAATCAAAAA 57.015 38.095 18.40 0.00 0.00 1.94
2402 3275 4.220533 GAGTCATGTGGCTCATAAATGC 57.779 45.455 9.61 0.00 45.61 3.56
2403 3276 3.004106 GAGTCATGTGGCTCATAAATGCC 59.996 47.826 9.61 0.00 45.61 4.40
2407 3280 3.840437 GGCTCATAAATGCCGCCA 58.160 55.556 14.40 0.00 41.01 5.69
2408 3281 2.344535 GGCTCATAAATGCCGCCAT 58.655 52.632 14.40 0.00 41.01 4.40
2409 3282 0.038892 GGCTCATAAATGCCGCCATG 60.039 55.000 14.40 0.00 41.01 3.66
2410 3283 0.038892 GCTCATAAATGCCGCCATGG 60.039 55.000 7.63 7.63 42.50 3.66
2419 3292 3.364442 CCGCCATGGCAGTGAAAA 58.636 55.556 34.93 0.00 42.06 2.29
2420 3293 1.892338 CCGCCATGGCAGTGAAAAT 59.108 52.632 34.93 0.00 42.06 1.82
2421 3294 0.458889 CCGCCATGGCAGTGAAAATG 60.459 55.000 34.93 15.75 42.06 2.32
2422 3295 0.527113 CGCCATGGCAGTGAAAATGA 59.473 50.000 34.93 0.00 42.06 2.57
2423 3296 1.468565 CGCCATGGCAGTGAAAATGAG 60.469 52.381 34.93 11.33 42.06 2.90
2424 3297 1.738030 GCCATGGCAGTGAAAATGAGC 60.738 52.381 32.08 0.00 41.49 4.26
2425 3298 1.546923 CCATGGCAGTGAAAATGAGCA 59.453 47.619 0.00 0.00 30.28 4.26
2426 3299 2.602878 CATGGCAGTGAAAATGAGCAC 58.397 47.619 0.00 0.00 30.28 4.40
2427 3300 1.985473 TGGCAGTGAAAATGAGCACT 58.015 45.000 0.00 0.00 45.62 4.40
2428 3301 2.309613 TGGCAGTGAAAATGAGCACTT 58.690 42.857 0.00 0.00 42.33 3.16
2429 3302 2.694628 TGGCAGTGAAAATGAGCACTTT 59.305 40.909 0.00 0.00 42.33 2.66
2430 3303 3.054878 GGCAGTGAAAATGAGCACTTTG 58.945 45.455 0.00 0.00 42.33 2.77
2431 3304 3.054878 GCAGTGAAAATGAGCACTTTGG 58.945 45.455 0.00 0.00 42.33 3.28
2432 3305 3.054878 CAGTGAAAATGAGCACTTTGGC 58.945 45.455 0.00 0.00 42.33 4.52
2465 3338 9.780186 AGCATGATTAGTACTAAAATAAGTCCC 57.220 33.333 18.88 3.62 0.00 4.46
2466 3339 9.780186 GCATGATTAGTACTAAAATAAGTCCCT 57.220 33.333 18.88 0.00 0.00 4.20
2480 3353 6.775594 ATAAGTCCCTTAAATTCAAGCACC 57.224 37.500 0.00 0.00 29.35 5.01
2481 3354 3.431415 AGTCCCTTAAATTCAAGCACCC 58.569 45.455 0.00 0.00 0.00 4.61
2482 3355 3.076032 AGTCCCTTAAATTCAAGCACCCT 59.924 43.478 0.00 0.00 0.00 4.34
2483 3356 3.444034 GTCCCTTAAATTCAAGCACCCTC 59.556 47.826 0.00 0.00 0.00 4.30
2484 3357 3.333680 TCCCTTAAATTCAAGCACCCTCT 59.666 43.478 0.00 0.00 0.00 3.69
2485 3358 4.089361 CCCTTAAATTCAAGCACCCTCTT 58.911 43.478 0.00 0.00 0.00 2.85
2486 3359 5.014755 TCCCTTAAATTCAAGCACCCTCTTA 59.985 40.000 0.00 0.00 0.00 2.10
2487 3360 5.358160 CCCTTAAATTCAAGCACCCTCTTAG 59.642 44.000 0.00 0.00 0.00 2.18
2488 3361 5.946377 CCTTAAATTCAAGCACCCTCTTAGT 59.054 40.000 0.00 0.00 0.00 2.24
2489 3362 7.110155 CCTTAAATTCAAGCACCCTCTTAGTA 58.890 38.462 0.00 0.00 0.00 1.82
2490 3363 7.281100 CCTTAAATTCAAGCACCCTCTTAGTAG 59.719 40.741 0.00 0.00 0.00 2.57
2491 3364 5.763876 AATTCAAGCACCCTCTTAGTAGT 57.236 39.130 0.00 0.00 0.00 2.73
2492 3365 4.537135 TTCAAGCACCCTCTTAGTAGTG 57.463 45.455 0.00 0.00 0.00 2.74
2493 3366 3.507411 TCAAGCACCCTCTTAGTAGTGT 58.493 45.455 0.00 0.00 32.75 3.55
2494 3367 3.901844 TCAAGCACCCTCTTAGTAGTGTT 59.098 43.478 0.00 0.00 32.75 3.32
2495 3368 3.963428 AGCACCCTCTTAGTAGTGTTG 57.037 47.619 0.00 0.00 32.75 3.33
2496 3369 3.240302 AGCACCCTCTTAGTAGTGTTGT 58.760 45.455 0.00 0.00 32.75 3.32
2497 3370 3.646637 AGCACCCTCTTAGTAGTGTTGTT 59.353 43.478 0.00 0.00 32.75 2.83
2498 3371 4.836736 AGCACCCTCTTAGTAGTGTTGTTA 59.163 41.667 0.00 0.00 32.75 2.41
2499 3372 4.928020 GCACCCTCTTAGTAGTGTTGTTAC 59.072 45.833 0.00 0.00 32.75 2.50
2500 3373 5.510179 GCACCCTCTTAGTAGTGTTGTTACA 60.510 44.000 0.00 0.00 32.75 2.41
2501 3374 6.698380 CACCCTCTTAGTAGTGTTGTTACAT 58.302 40.000 0.00 0.00 36.50 2.29
2502 3375 6.590292 CACCCTCTTAGTAGTGTTGTTACATG 59.410 42.308 0.00 0.00 36.50 3.21
2503 3376 6.269307 ACCCTCTTAGTAGTGTTGTTACATGT 59.731 38.462 2.69 2.69 36.50 3.21
2504 3377 7.452501 ACCCTCTTAGTAGTGTTGTTACATGTA 59.547 37.037 0.08 0.08 36.50 2.29
2505 3378 7.974501 CCCTCTTAGTAGTGTTGTTACATGTAG 59.025 40.741 5.56 0.00 36.50 2.74
2506 3379 8.521176 CCTCTTAGTAGTGTTGTTACATGTAGT 58.479 37.037 5.56 0.00 36.50 2.73
2507 3380 9.909644 CTCTTAGTAGTGTTGTTACATGTAGTT 57.090 33.333 5.56 0.00 36.50 2.24
2508 3381 9.687210 TCTTAGTAGTGTTGTTACATGTAGTTG 57.313 33.333 5.56 0.00 36.50 3.16
2509 3382 9.472361 CTTAGTAGTGTTGTTACATGTAGTTGT 57.528 33.333 5.56 0.00 36.50 3.32
2510 3383 7.941795 AGTAGTGTTGTTACATGTAGTTGTC 57.058 36.000 5.56 0.00 36.50 3.18
2511 3384 7.494211 AGTAGTGTTGTTACATGTAGTTGTCA 58.506 34.615 5.56 1.45 36.50 3.58
2512 3385 6.598753 AGTGTTGTTACATGTAGTTGTCAC 57.401 37.500 5.56 12.17 36.50 3.67
2513 3386 5.233476 AGTGTTGTTACATGTAGTTGTCACG 59.767 40.000 5.56 0.00 36.50 4.35
2514 3387 5.005971 GTGTTGTTACATGTAGTTGTCACGT 59.994 40.000 5.56 0.00 36.50 4.49
2515 3388 5.232626 TGTTGTTACATGTAGTTGTCACGTC 59.767 40.000 5.56 0.00 0.00 4.34
2516 3389 4.934515 TGTTACATGTAGTTGTCACGTCA 58.065 39.130 5.56 0.00 0.00 4.35
2517 3390 4.741185 TGTTACATGTAGTTGTCACGTCAC 59.259 41.667 5.56 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.396301 CGTTGATGAAGCTGAAGAGGC 59.604 52.381 0.00 0.00 0.00 4.70
19 23 3.388841 CTACCAGTGGGGAGCGTT 58.611 61.111 15.21 0.00 38.64 4.84
42 47 1.265236 AAAGCGCCCATGATTTCCAA 58.735 45.000 2.29 0.00 0.00 3.53
75 80 1.359833 CAGCACGAGCCAAGCAAAA 59.640 52.632 0.00 0.00 43.56 2.44
79 84 2.682256 TTTTGCAGCACGAGCCAAGC 62.682 55.000 0.00 4.40 43.56 4.01
81 86 1.065600 GTTTTGCAGCACGAGCCAA 59.934 52.632 0.00 0.00 43.56 4.52
89 94 1.140589 CAACACCGGTTTTGCAGCA 59.859 52.632 19.81 0.00 34.21 4.41
97 102 4.941309 GGCCGTCCAACACCGGTT 62.941 66.667 2.97 0.00 45.91 4.44
115 120 0.976641 TTGTGTCTAGCCAGGTGAGG 59.023 55.000 0.00 0.00 0.00 3.86
119 124 1.348036 GAAGGTTGTGTCTAGCCAGGT 59.652 52.381 0.00 0.00 0.00 4.00
133 138 1.002087 GGACGTGTGATGAGGAAGGTT 59.998 52.381 0.00 0.00 0.00 3.50
156 161 3.695606 GTCACGGAGCAGGCTGGA 61.696 66.667 17.64 0.20 0.00 3.86
158 163 4.007644 TGGTCACGGAGCAGGCTG 62.008 66.667 10.94 10.94 35.04 4.85
163 168 4.314440 GTGCCTGGTCACGGAGCA 62.314 66.667 5.69 5.81 37.74 4.26
168 173 1.003355 ATTCTGGTGCCTGGTCACG 60.003 57.895 12.80 3.63 37.83 4.35
179 184 1.293062 AGTGCTCCATGGATTCTGGT 58.707 50.000 16.63 0.00 35.19 4.00
241 246 2.670401 GTGAAGACACCAAGCGAAAG 57.330 50.000 0.00 0.00 40.74 2.62
256 261 1.002624 GGAACCCGAGCATGGTGAA 60.003 57.895 0.00 0.00 35.88 3.18
284 289 4.137543 GCCACCGATCCAGAAAGATATTT 58.862 43.478 0.00 0.00 0.00 1.40
285 290 3.136443 TGCCACCGATCCAGAAAGATATT 59.864 43.478 0.00 0.00 0.00 1.28
288 293 0.911769 TGCCACCGATCCAGAAAGAT 59.088 50.000 0.00 0.00 0.00 2.40
289 294 0.036388 GTGCCACCGATCCAGAAAGA 60.036 55.000 0.00 0.00 0.00 2.52
300 305 1.798725 CGTACGTAGTGTGCCACCG 60.799 63.158 7.22 0.00 45.73 4.94
325 330 1.003580 CTTTCTTGTAGGCTGCCAGGA 59.996 52.381 22.65 3.09 0.00 3.86
328 333 3.650647 CCTTTCTTGTAGGCTGCCA 57.349 52.632 22.65 3.92 0.00 4.92
348 353 2.600867 CGAGAAGAATGAGCGAGGAAAC 59.399 50.000 0.00 0.00 0.00 2.78
355 360 1.134965 AGGGAACGAGAAGAATGAGCG 60.135 52.381 0.00 0.00 0.00 5.03
364 369 3.146066 CAAATTGACCAGGGAACGAGAA 58.854 45.455 0.00 0.00 0.00 2.87
372 377 3.674138 CGATGCTTTCAAATTGACCAGGG 60.674 47.826 0.00 0.00 0.00 4.45
377 382 5.520022 AATTGCGATGCTTTCAAATTGAC 57.480 34.783 0.00 0.00 0.00 3.18
386 391 3.020102 GCACGAATTGCGATGCTTT 57.980 47.368 0.00 0.00 42.79 3.51
435 440 1.973515 CCTGGTAGCATGGATCAGCTA 59.026 52.381 9.00 9.00 42.05 3.32
473 497 1.962412 TCGCAAATACGCAAAGCTTG 58.038 45.000 0.00 0.00 0.00 4.01
515 540 4.890581 ACTTCTCGAGCAGGTGTAAGATAT 59.109 41.667 16.54 0.00 0.00 1.63
518 543 2.488545 GACTTCTCGAGCAGGTGTAAGA 59.511 50.000 16.54 0.00 0.00 2.10
519 544 2.416162 GGACTTCTCGAGCAGGTGTAAG 60.416 54.545 16.54 10.99 0.00 2.34
520 545 1.544691 GGACTTCTCGAGCAGGTGTAA 59.455 52.381 16.54 0.00 0.00 2.41
521 546 1.174783 GGACTTCTCGAGCAGGTGTA 58.825 55.000 16.54 0.00 0.00 2.90
523 548 1.464734 TAGGACTTCTCGAGCAGGTG 58.535 55.000 16.54 3.20 0.00 4.00
524 549 2.217510 TTAGGACTTCTCGAGCAGGT 57.782 50.000 16.54 10.26 0.00 4.00
525 550 3.254657 CCTATTAGGACTTCTCGAGCAGG 59.745 52.174 16.54 7.22 37.67 4.85
526 551 3.886505 ACCTATTAGGACTTCTCGAGCAG 59.113 47.826 16.80 10.72 37.67 4.24
527 552 3.899726 ACCTATTAGGACTTCTCGAGCA 58.100 45.455 16.80 0.00 37.67 4.26
528 553 4.922471 AACCTATTAGGACTTCTCGAGC 57.078 45.455 16.80 0.00 37.67 5.03
628 1488 1.597854 CGAAGCCTGCACTTCACCA 60.598 57.895 15.15 0.00 45.22 4.17
633 1493 3.044305 GCGACGAAGCCTGCACTT 61.044 61.111 0.00 0.00 0.00 3.16
657 1517 4.008933 GCCCGCACTCCACTGTCT 62.009 66.667 0.00 0.00 0.00 3.41
719 1579 2.089187 CGTGTCGACGTCTAACATACG 58.911 52.381 19.44 15.88 45.64 3.06
720 1580 2.434761 CCGTGTCGACGTCTAACATAC 58.565 52.381 19.44 9.88 44.54 2.39
721 1581 1.202065 GCCGTGTCGACGTCTAACATA 60.202 52.381 19.44 0.31 44.54 2.29
722 1582 0.455633 GCCGTGTCGACGTCTAACAT 60.456 55.000 19.44 0.00 44.54 2.71
872 1734 4.239304 GTTTTTATAGTGGTTTTGGGCCG 58.761 43.478 0.00 0.00 0.00 6.13
893 1755 2.369001 GGGACTGGCTAGGAGGGT 59.631 66.667 0.85 0.00 0.00 4.34
906 1768 0.323451 GTGGGTGAGGATTTGGGGAC 60.323 60.000 0.00 0.00 0.00 4.46
916 1778 0.319728 CTGTGAGTGAGTGGGTGAGG 59.680 60.000 0.00 0.00 0.00 3.86
935 1797 2.283529 TGAGTGAAGGCCGAGGGAC 61.284 63.158 0.00 0.00 0.00 4.46
1248 2112 2.263852 CTCGCCTGCTGCTTGAGA 59.736 61.111 0.00 0.00 38.05 3.27
1435 2299 2.259917 ACTCATGTGTCCATCAGTCCA 58.740 47.619 0.00 0.00 23.31 4.02
1436 2300 3.340814 AACTCATGTGTCCATCAGTCC 57.659 47.619 0.03 0.00 30.25 3.85
1437 2301 4.327357 CGTTAACTCATGTGTCCATCAGTC 59.673 45.833 3.71 0.00 30.25 3.51
1438 2302 4.021456 TCGTTAACTCATGTGTCCATCAGT 60.021 41.667 3.71 0.00 33.30 3.41
1439 2303 4.494484 TCGTTAACTCATGTGTCCATCAG 58.506 43.478 3.71 0.00 0.00 2.90
1440 2304 4.529109 TCGTTAACTCATGTGTCCATCA 57.471 40.909 3.71 0.00 0.00 3.07
1441 2305 6.422776 AATTCGTTAACTCATGTGTCCATC 57.577 37.500 3.71 0.00 0.00 3.51
1442 2306 7.389330 TGTTAATTCGTTAACTCATGTGTCCAT 59.611 33.333 3.71 0.00 38.04 3.41
1443 2307 6.706716 TGTTAATTCGTTAACTCATGTGTCCA 59.293 34.615 3.71 0.00 38.04 4.02
1483 2347 8.034215 CCCTGCATACATCAAATGAAAGTTAAA 58.966 33.333 0.00 0.00 0.00 1.52
1493 2358 1.677576 CGCACCCTGCATACATCAAAT 59.322 47.619 0.00 0.00 45.36 2.32
1526 2391 1.462616 TGCATCTGAAATGGTTCCGG 58.537 50.000 0.00 0.00 32.28 5.14
1528 2393 3.447918 CCATGCATCTGAAATGGTTCC 57.552 47.619 0.00 0.00 36.82 3.62
1575 2440 2.749044 CATGCAGCAAGGACGGCT 60.749 61.111 0.00 0.00 43.77 5.52
1601 2466 7.360575 ACTAGTAAAGCAGTAAATCAAACGG 57.639 36.000 0.00 0.00 0.00 4.44
1607 2472 9.857957 ACAGTAGAACTAGTAAAGCAGTAAATC 57.142 33.333 0.00 0.00 0.00 2.17
1672 2544 1.083489 CAACATCGGCCACAACGTAT 58.917 50.000 2.24 0.00 0.00 3.06
1737 2609 5.782047 TGCATTACAGAATTCCAACAAAGG 58.218 37.500 0.65 0.00 0.00 3.11
1744 2616 5.651576 TGTAAGCATGCATTACAGAATTCCA 59.348 36.000 25.62 10.92 38.02 3.53
1749 2621 9.948964 ATATAGATGTAAGCATGCATTACAGAA 57.051 29.630 29.34 22.22 44.07 3.02
1821 2694 1.663643 GCAAACCGCGATTCAGACATA 59.336 47.619 8.23 0.00 0.00 2.29
1825 2698 1.866237 GTGCAAACCGCGATTCAGA 59.134 52.632 8.23 0.00 46.97 3.27
1826 2699 4.440214 GTGCAAACCGCGATTCAG 57.560 55.556 8.23 0.00 46.97 3.02
1847 2720 2.737252 CGAAGTAGGAGAACAACTTGGC 59.263 50.000 0.00 0.00 33.72 4.52
1852 2725 5.287226 TCTTGAACGAAGTAGGAGAACAAC 58.713 41.667 0.00 0.00 45.00 3.32
1855 2728 5.405873 CCTTTCTTGAACGAAGTAGGAGAAC 59.594 44.000 0.00 0.00 45.00 3.01
1879 2752 3.922240 TCGTTAATGTCTCAAGCGTTACC 59.078 43.478 0.00 0.00 0.00 2.85
1955 2828 8.179509 ACTTAATAGTATGCAAGGTATCGTCT 57.820 34.615 0.00 0.00 31.21 4.18
1956 2829 8.813643 AACTTAATAGTATGCAAGGTATCGTC 57.186 34.615 0.00 0.00 33.17 4.20
1957 2830 9.257651 GAAACTTAATAGTATGCAAGGTATCGT 57.742 33.333 0.00 0.00 33.17 3.73
1958 2831 8.709646 GGAAACTTAATAGTATGCAAGGTATCG 58.290 37.037 0.00 0.00 33.17 2.92
1959 2832 9.555727 TGGAAACTTAATAGTATGCAAGGTATC 57.444 33.333 0.00 4.94 33.17 2.24
1960 2833 9.914834 TTGGAAACTTAATAGTATGCAAGGTAT 57.085 29.630 0.00 0.00 33.17 2.73
1961 2834 9.914834 ATTGGAAACTTAATAGTATGCAAGGTA 57.085 29.630 0.00 0.00 33.17 3.08
2033 2906 9.729023 CACTTGTGTTTGATGTAAATTGTCTTA 57.271 29.630 0.00 0.00 0.00 2.10
2034 2907 7.222611 GCACTTGTGTTTGATGTAAATTGTCTT 59.777 33.333 2.61 0.00 0.00 3.01
2035 2908 6.697019 GCACTTGTGTTTGATGTAAATTGTCT 59.303 34.615 2.61 0.00 0.00 3.41
2036 2909 6.475076 TGCACTTGTGTTTGATGTAAATTGTC 59.525 34.615 2.61 0.00 0.00 3.18
2037 2910 6.336566 TGCACTTGTGTTTGATGTAAATTGT 58.663 32.000 2.61 0.00 0.00 2.71
2038 2911 6.825284 TGCACTTGTGTTTGATGTAAATTG 57.175 33.333 2.61 0.00 0.00 2.32
2044 2917 8.962884 TCTATATATGCACTTGTGTTTGATGT 57.037 30.769 0.00 0.00 0.00 3.06
2051 2924 9.448438 TGAACTTTTCTATATATGCACTTGTGT 57.552 29.630 0.00 0.00 0.00 3.72
2052 2925 9.926751 CTGAACTTTTCTATATATGCACTTGTG 57.073 33.333 0.00 0.00 0.00 3.33
2053 2926 9.890629 TCTGAACTTTTCTATATATGCACTTGT 57.109 29.630 0.00 0.00 0.00 3.16
2055 2928 9.890629 TGTCTGAACTTTTCTATATATGCACTT 57.109 29.630 0.00 0.00 0.00 3.16
2056 2929 9.319143 GTGTCTGAACTTTTCTATATATGCACT 57.681 33.333 0.00 0.00 0.00 4.40
2057 2930 9.098355 TGTGTCTGAACTTTTCTATATATGCAC 57.902 33.333 0.00 0.00 0.00 4.57
2058 2931 9.665719 TTGTGTCTGAACTTTTCTATATATGCA 57.334 29.630 0.00 0.00 0.00 3.96
2062 2935 9.587772 GAGCTTGTGTCTGAACTTTTCTATATA 57.412 33.333 0.00 0.00 0.00 0.86
2063 2936 8.097038 TGAGCTTGTGTCTGAACTTTTCTATAT 58.903 33.333 0.00 0.00 0.00 0.86
2064 2937 7.385205 GTGAGCTTGTGTCTGAACTTTTCTATA 59.615 37.037 0.00 0.00 0.00 1.31
2065 2938 6.203723 GTGAGCTTGTGTCTGAACTTTTCTAT 59.796 38.462 0.00 0.00 0.00 1.98
2066 2939 5.523916 GTGAGCTTGTGTCTGAACTTTTCTA 59.476 40.000 0.00 0.00 0.00 2.10
2067 2940 4.333926 GTGAGCTTGTGTCTGAACTTTTCT 59.666 41.667 0.00 0.00 0.00 2.52
2068 2941 4.094887 TGTGAGCTTGTGTCTGAACTTTTC 59.905 41.667 0.00 0.00 0.00 2.29
2069 2942 4.009675 TGTGAGCTTGTGTCTGAACTTTT 58.990 39.130 0.00 0.00 0.00 2.27
2070 2943 3.375299 GTGTGAGCTTGTGTCTGAACTTT 59.625 43.478 0.00 0.00 0.00 2.66
2071 2944 2.939103 GTGTGAGCTTGTGTCTGAACTT 59.061 45.455 0.00 0.00 0.00 2.66
2072 2945 2.169352 AGTGTGAGCTTGTGTCTGAACT 59.831 45.455 0.00 0.00 0.00 3.01
2073 2946 2.555199 AGTGTGAGCTTGTGTCTGAAC 58.445 47.619 0.00 0.00 0.00 3.18
2074 2947 2.988010 AGTGTGAGCTTGTGTCTGAA 57.012 45.000 0.00 0.00 0.00 3.02
2075 2948 2.959030 ACTAGTGTGAGCTTGTGTCTGA 59.041 45.455 0.00 0.00 0.00 3.27
2076 2949 3.055591 CACTAGTGTGAGCTTGTGTCTG 58.944 50.000 15.06 0.00 46.55 3.51
2077 2950 2.546795 GCACTAGTGTGAGCTTGTGTCT 60.547 50.000 23.44 0.00 46.55 3.41
2078 2951 1.795286 GCACTAGTGTGAGCTTGTGTC 59.205 52.381 23.44 0.00 46.55 3.67
2079 2952 1.138859 TGCACTAGTGTGAGCTTGTGT 59.861 47.619 23.44 0.00 46.55 3.72
2080 2953 1.869774 TGCACTAGTGTGAGCTTGTG 58.130 50.000 23.44 0.00 46.55 3.33
2081 2954 2.847327 ATGCACTAGTGTGAGCTTGT 57.153 45.000 23.44 0.00 46.55 3.16
2082 2955 7.540400 GTCTATATATGCACTAGTGTGAGCTTG 59.460 40.741 23.44 8.88 46.55 4.01
2083 2956 7.231519 TGTCTATATATGCACTAGTGTGAGCTT 59.768 37.037 23.44 10.09 46.55 3.74
2084 2957 6.717084 TGTCTATATATGCACTAGTGTGAGCT 59.283 38.462 23.44 8.23 46.55 4.09
2085 2958 6.914259 TGTCTATATATGCACTAGTGTGAGC 58.086 40.000 23.44 10.19 46.55 4.26
2086 2959 8.572185 ACTTGTCTATATATGCACTAGTGTGAG 58.428 37.037 23.44 10.50 46.55 3.51
2087 2960 8.465273 ACTTGTCTATATATGCACTAGTGTGA 57.535 34.615 23.44 11.50 46.55 3.58
2088 2961 9.534565 AAACTTGTCTATATATGCACTAGTGTG 57.465 33.333 23.44 0.92 46.37 3.82
2089 2962 9.534565 CAAACTTGTCTATATATGCACTAGTGT 57.465 33.333 23.44 7.94 0.00 3.55
2090 2963 8.491152 GCAAACTTGTCTATATATGCACTAGTG 58.509 37.037 18.93 18.93 33.00 2.74
2091 2964 8.204160 TGCAAACTTGTCTATATATGCACTAGT 58.796 33.333 0.00 0.00 37.61 2.57
2092 2965 8.593492 TGCAAACTTGTCTATATATGCACTAG 57.407 34.615 0.00 1.38 37.61 2.57
2096 2969 7.622893 TTGTGCAAACTTGTCTATATATGCA 57.377 32.000 0.00 0.00 39.95 3.96
2097 2970 8.798153 GTTTTGTGCAAACTTGTCTATATATGC 58.202 33.333 0.00 0.00 41.58 3.14
2111 2984 6.311200 AGTTCTCATTGAAGTTTTGTGCAAAC 59.689 34.615 0.00 0.00 44.73 2.93
2112 2985 6.397272 AGTTCTCATTGAAGTTTTGTGCAAA 58.603 32.000 0.00 0.00 34.90 3.68
2113 2986 5.964758 AGTTCTCATTGAAGTTTTGTGCAA 58.035 33.333 0.00 0.00 34.90 4.08
2114 2987 5.581126 AGTTCTCATTGAAGTTTTGTGCA 57.419 34.783 0.00 0.00 34.90 4.57
2115 2988 5.626955 GCTAGTTCTCATTGAAGTTTTGTGC 59.373 40.000 0.00 0.00 39.01 4.57
2116 2989 6.634436 GTGCTAGTTCTCATTGAAGTTTTGTG 59.366 38.462 0.00 0.00 39.01 3.33
2117 2990 6.318648 TGTGCTAGTTCTCATTGAAGTTTTGT 59.681 34.615 0.00 0.00 39.01 2.83
2118 2991 6.728200 TGTGCTAGTTCTCATTGAAGTTTTG 58.272 36.000 0.00 0.00 39.01 2.44
2119 2992 6.942532 TGTGCTAGTTCTCATTGAAGTTTT 57.057 33.333 0.00 0.00 39.01 2.43
2120 2993 6.712095 TCATGTGCTAGTTCTCATTGAAGTTT 59.288 34.615 0.00 0.00 39.01 2.66
2121 2994 6.233434 TCATGTGCTAGTTCTCATTGAAGTT 58.767 36.000 0.00 0.00 39.01 2.66
2122 2995 5.798132 TCATGTGCTAGTTCTCATTGAAGT 58.202 37.500 0.00 0.00 40.98 3.01
2123 2996 6.922247 ATCATGTGCTAGTTCTCATTGAAG 57.078 37.500 0.00 0.00 35.01 3.02
2124 2997 8.043113 ACTTATCATGTGCTAGTTCTCATTGAA 58.957 33.333 0.00 0.00 0.00 2.69
2125 2998 7.493645 CACTTATCATGTGCTAGTTCTCATTGA 59.506 37.037 0.00 0.00 0.00 2.57
2126 2999 7.279536 ACACTTATCATGTGCTAGTTCTCATTG 59.720 37.037 0.00 0.00 38.86 2.82
2127 3000 7.334090 ACACTTATCATGTGCTAGTTCTCATT 58.666 34.615 0.00 0.00 38.86 2.57
2128 3001 6.882656 ACACTTATCATGTGCTAGTTCTCAT 58.117 36.000 0.00 0.00 38.86 2.90
2129 3002 6.286240 ACACTTATCATGTGCTAGTTCTCA 57.714 37.500 0.00 0.00 38.86 3.27
2130 3003 7.708051 TCTACACTTATCATGTGCTAGTTCTC 58.292 38.462 0.00 0.00 38.86 2.87
2131 3004 7.558081 TCTCTACACTTATCATGTGCTAGTTCT 59.442 37.037 0.00 0.00 38.86 3.01
2132 3005 7.708051 TCTCTACACTTATCATGTGCTAGTTC 58.292 38.462 0.00 0.00 38.86 3.01
2133 3006 7.558081 TCTCTCTACACTTATCATGTGCTAGTT 59.442 37.037 0.00 0.00 38.86 2.24
2134 3007 7.057264 TCTCTCTACACTTATCATGTGCTAGT 58.943 38.462 0.00 0.00 38.86 2.57
2135 3008 7.503521 TCTCTCTACACTTATCATGTGCTAG 57.496 40.000 0.00 0.00 38.86 3.42
2136 3009 7.775561 TCTTCTCTCTACACTTATCATGTGCTA 59.224 37.037 0.00 0.00 38.86 3.49
2137 3010 6.605194 TCTTCTCTCTACACTTATCATGTGCT 59.395 38.462 0.00 0.00 38.86 4.40
2138 3011 6.695278 GTCTTCTCTCTACACTTATCATGTGC 59.305 42.308 0.00 0.00 38.86 4.57
2139 3012 7.766283 TGTCTTCTCTCTACACTTATCATGTG 58.234 38.462 0.00 0.00 40.87 3.21
2140 3013 7.068103 CCTGTCTTCTCTCTACACTTATCATGT 59.932 40.741 0.00 0.00 0.00 3.21
2141 3014 7.068103 ACCTGTCTTCTCTCTACACTTATCATG 59.932 40.741 0.00 0.00 0.00 3.07
2142 3015 7.122715 ACCTGTCTTCTCTCTACACTTATCAT 58.877 38.462 0.00 0.00 0.00 2.45
2143 3016 6.486056 ACCTGTCTTCTCTCTACACTTATCA 58.514 40.000 0.00 0.00 0.00 2.15
2144 3017 6.038936 GGACCTGTCTTCTCTCTACACTTATC 59.961 46.154 0.00 0.00 0.00 1.75
2145 3018 5.889289 GGACCTGTCTTCTCTCTACACTTAT 59.111 44.000 0.00 0.00 0.00 1.73
2146 3019 5.222068 TGGACCTGTCTTCTCTCTACACTTA 60.222 44.000 0.00 0.00 0.00 2.24
2147 3020 4.083565 GGACCTGTCTTCTCTCTACACTT 58.916 47.826 0.00 0.00 0.00 3.16
2148 3021 3.074687 TGGACCTGTCTTCTCTCTACACT 59.925 47.826 0.00 0.00 0.00 3.55
2149 3022 3.422796 TGGACCTGTCTTCTCTCTACAC 58.577 50.000 0.00 0.00 0.00 2.90
2150 3023 3.808834 TGGACCTGTCTTCTCTCTACA 57.191 47.619 0.00 0.00 0.00 2.74
2151 3024 5.470047 TTTTGGACCTGTCTTCTCTCTAC 57.530 43.478 0.00 0.00 0.00 2.59
2152 3025 4.528596 CCTTTTGGACCTGTCTTCTCTCTA 59.471 45.833 0.00 0.00 44.07 2.43
2153 3026 3.326297 CCTTTTGGACCTGTCTTCTCTCT 59.674 47.826 0.00 0.00 44.07 3.10
2154 3027 3.325135 TCCTTTTGGACCTGTCTTCTCTC 59.675 47.826 0.00 0.00 45.19 3.20
2155 3028 3.318313 TCCTTTTGGACCTGTCTTCTCT 58.682 45.455 0.00 0.00 45.19 3.10
2156 3029 3.771577 TCCTTTTGGACCTGTCTTCTC 57.228 47.619 0.00 0.00 45.19 2.87
2181 3054 9.206870 CACTTGTAATGCATTTGATAGGTTTTT 57.793 29.630 18.75 0.00 0.00 1.94
2182 3055 8.367156 ACACTTGTAATGCATTTGATAGGTTTT 58.633 29.630 18.75 0.00 0.00 2.43
2183 3056 7.895759 ACACTTGTAATGCATTTGATAGGTTT 58.104 30.769 18.75 0.00 0.00 3.27
2184 3057 7.466746 ACACTTGTAATGCATTTGATAGGTT 57.533 32.000 18.75 0.00 0.00 3.50
2185 3058 7.176515 TCAACACTTGTAATGCATTTGATAGGT 59.823 33.333 18.75 7.37 0.00 3.08
2186 3059 7.485913 GTCAACACTTGTAATGCATTTGATAGG 59.514 37.037 18.75 6.74 0.00 2.57
2187 3060 7.216881 CGTCAACACTTGTAATGCATTTGATAG 59.783 37.037 18.75 12.15 0.00 2.08
2188 3061 7.020602 CGTCAACACTTGTAATGCATTTGATA 58.979 34.615 18.75 0.00 0.00 2.15
2189 3062 5.858049 CGTCAACACTTGTAATGCATTTGAT 59.142 36.000 18.75 0.91 0.00 2.57
2190 3063 5.211454 CGTCAACACTTGTAATGCATTTGA 58.789 37.500 18.75 9.58 0.00 2.69
2191 3064 4.382457 CCGTCAACACTTGTAATGCATTTG 59.618 41.667 18.75 11.75 0.00 2.32
2192 3065 4.545610 CCGTCAACACTTGTAATGCATTT 58.454 39.130 18.75 1.81 0.00 2.32
2193 3066 3.611530 GCCGTCAACACTTGTAATGCATT 60.612 43.478 17.56 17.56 0.00 3.56
2194 3067 2.095263 GCCGTCAACACTTGTAATGCAT 60.095 45.455 0.00 0.00 0.00 3.96
2195 3068 1.265635 GCCGTCAACACTTGTAATGCA 59.734 47.619 0.00 0.00 0.00 3.96
2196 3069 1.265635 TGCCGTCAACACTTGTAATGC 59.734 47.619 0.00 0.00 0.00 3.56
2197 3070 3.617540 TTGCCGTCAACACTTGTAATG 57.382 42.857 0.00 0.00 0.00 1.90
2198 3071 3.568007 ACATTGCCGTCAACACTTGTAAT 59.432 39.130 0.00 0.00 34.60 1.89
2199 3072 2.946329 ACATTGCCGTCAACACTTGTAA 59.054 40.909 0.00 0.00 34.60 2.41
2200 3073 2.289274 CACATTGCCGTCAACACTTGTA 59.711 45.455 0.00 0.00 34.60 2.41
2201 3074 1.065401 CACATTGCCGTCAACACTTGT 59.935 47.619 0.00 0.00 34.60 3.16
2202 3075 1.065401 ACACATTGCCGTCAACACTTG 59.935 47.619 0.00 0.00 34.60 3.16
2203 3076 1.388547 ACACATTGCCGTCAACACTT 58.611 45.000 0.00 0.00 34.60 3.16
2204 3077 1.871039 GTACACATTGCCGTCAACACT 59.129 47.619 0.00 0.00 34.60 3.55
2205 3078 1.600013 TGTACACATTGCCGTCAACAC 59.400 47.619 0.00 0.00 34.60 3.32
2206 3079 1.954927 TGTACACATTGCCGTCAACA 58.045 45.000 0.00 0.00 34.60 3.33
2207 3080 2.473868 CGATGTACACATTGCCGTCAAC 60.474 50.000 0.00 0.00 36.57 3.18
2208 3081 1.729517 CGATGTACACATTGCCGTCAA 59.270 47.619 0.00 0.00 36.57 3.18
2209 3082 1.067495 TCGATGTACACATTGCCGTCA 60.067 47.619 0.00 0.00 37.60 4.35
2210 3083 1.635844 TCGATGTACACATTGCCGTC 58.364 50.000 0.00 0.00 37.60 4.79
2211 3084 2.201732 GATCGATGTACACATTGCCGT 58.798 47.619 0.54 0.00 37.60 5.68
2212 3085 2.200899 TGATCGATGTACACATTGCCG 58.799 47.619 0.54 1.06 37.60 5.69
2213 3086 4.332543 TCTTTGATCGATGTACACATTGCC 59.667 41.667 0.54 1.29 37.60 4.52
2214 3087 5.163864 TGTCTTTGATCGATGTACACATTGC 60.164 40.000 0.54 0.00 37.60 3.56
2215 3088 6.407475 TGTCTTTGATCGATGTACACATTG 57.593 37.500 0.54 3.54 38.75 2.82
2216 3089 6.258727 GGATGTCTTTGATCGATGTACACATT 59.741 38.462 0.54 0.00 36.57 2.71
2217 3090 5.755375 GGATGTCTTTGATCGATGTACACAT 59.245 40.000 0.54 4.50 39.70 3.21
2218 3091 5.109210 GGATGTCTTTGATCGATGTACACA 58.891 41.667 0.54 0.00 0.00 3.72
2219 3092 4.207224 CGGATGTCTTTGATCGATGTACAC 59.793 45.833 0.54 0.00 0.00 2.90
2220 3093 4.359706 CGGATGTCTTTGATCGATGTACA 58.640 43.478 0.54 0.00 0.00 2.90
2221 3094 3.182572 GCGGATGTCTTTGATCGATGTAC 59.817 47.826 0.54 0.00 0.00 2.90
2222 3095 3.181480 TGCGGATGTCTTTGATCGATGTA 60.181 43.478 0.54 0.00 0.00 2.29
2223 3096 2.205074 GCGGATGTCTTTGATCGATGT 58.795 47.619 0.54 0.00 0.00 3.06
2224 3097 2.204237 TGCGGATGTCTTTGATCGATG 58.796 47.619 0.54 0.00 0.00 3.84
2225 3098 2.602257 TGCGGATGTCTTTGATCGAT 57.398 45.000 0.00 0.00 0.00 3.59
2226 3099 2.378445 TTGCGGATGTCTTTGATCGA 57.622 45.000 0.00 0.00 0.00 3.59
2227 3100 2.852143 GCATTGCGGATGTCTTTGATCG 60.852 50.000 0.00 0.00 38.07 3.69
2228 3101 2.097954 TGCATTGCGGATGTCTTTGATC 59.902 45.455 3.84 0.00 38.07 2.92
2229 3102 2.093890 TGCATTGCGGATGTCTTTGAT 58.906 42.857 3.84 0.00 38.07 2.57
2230 3103 1.532523 TGCATTGCGGATGTCTTTGA 58.467 45.000 3.84 0.00 38.07 2.69
2231 3104 2.350899 TTGCATTGCGGATGTCTTTG 57.649 45.000 3.84 0.00 38.07 2.77
2232 3105 2.035704 TGTTTGCATTGCGGATGTCTTT 59.964 40.909 3.84 0.00 38.07 2.52
2233 3106 1.612950 TGTTTGCATTGCGGATGTCTT 59.387 42.857 3.84 0.00 38.07 3.01
2234 3107 1.246649 TGTTTGCATTGCGGATGTCT 58.753 45.000 3.84 0.00 38.07 3.41
2235 3108 2.282701 ATGTTTGCATTGCGGATGTC 57.717 45.000 3.84 0.00 38.07 3.06
2236 3109 4.389890 AATATGTTTGCATTGCGGATGT 57.610 36.364 3.84 0.00 38.07 3.06
2237 3110 6.825284 TTTAATATGTTTGCATTGCGGATG 57.175 33.333 3.84 0.00 38.85 3.51
2238 3111 7.208777 TCATTTAATATGTTTGCATTGCGGAT 58.791 30.769 3.84 0.00 36.58 4.18
2239 3112 6.567959 TCATTTAATATGTTTGCATTGCGGA 58.432 32.000 3.84 0.00 36.58 5.54
2240 3113 6.825284 TCATTTAATATGTTTGCATTGCGG 57.175 33.333 3.84 0.00 36.58 5.69
2241 3114 9.705471 AATTTCATTTAATATGTTTGCATTGCG 57.295 25.926 3.84 0.00 36.58 4.85
2258 3131 8.686334 ACTTACTCGGCATTATGAATTTCATTT 58.314 29.630 16.62 3.39 38.26 2.32
2259 3132 8.225603 ACTTACTCGGCATTATGAATTTCATT 57.774 30.769 16.62 0.00 38.26 2.57
2260 3133 7.807977 ACTTACTCGGCATTATGAATTTCAT 57.192 32.000 15.78 15.78 40.72 2.57
2261 3134 7.624360 AACTTACTCGGCATTATGAATTTCA 57.376 32.000 0.75 0.75 0.00 2.69
2262 3135 7.644157 GGAAACTTACTCGGCATTATGAATTTC 59.356 37.037 0.00 0.00 0.00 2.17
2263 3136 7.122055 TGGAAACTTACTCGGCATTATGAATTT 59.878 33.333 0.00 0.00 0.00 1.82
2264 3137 6.601613 TGGAAACTTACTCGGCATTATGAATT 59.398 34.615 0.00 0.00 0.00 2.17
2265 3138 6.119536 TGGAAACTTACTCGGCATTATGAAT 58.880 36.000 0.00 0.00 0.00 2.57
2266 3139 5.492895 TGGAAACTTACTCGGCATTATGAA 58.507 37.500 0.00 0.00 0.00 2.57
2267 3140 5.092554 TGGAAACTTACTCGGCATTATGA 57.907 39.130 0.00 0.00 0.00 2.15
2268 3141 5.811399 TTGGAAACTTACTCGGCATTATG 57.189 39.130 0.00 0.00 0.00 1.90
2269 3142 6.617879 GTTTTGGAAACTTACTCGGCATTAT 58.382 36.000 0.00 0.00 0.00 1.28
2270 3143 5.334260 CGTTTTGGAAACTTACTCGGCATTA 60.334 40.000 2.53 0.00 0.00 1.90
2271 3144 4.555906 CGTTTTGGAAACTTACTCGGCATT 60.556 41.667 2.53 0.00 0.00 3.56
2272 3145 3.058501 CGTTTTGGAAACTTACTCGGCAT 60.059 43.478 2.53 0.00 0.00 4.40
2273 3146 2.288458 CGTTTTGGAAACTTACTCGGCA 59.712 45.455 2.53 0.00 0.00 5.69
2274 3147 2.350102 CCGTTTTGGAAACTTACTCGGC 60.350 50.000 2.53 0.00 42.00 5.54
2275 3148 3.132925 TCCGTTTTGGAAACTTACTCGG 58.867 45.455 0.00 0.00 46.38 4.63
2287 3160 8.439286 CCATTTTTGTGTATTAATCCGTTTTGG 58.561 33.333 0.00 0.00 40.09 3.28
2288 3161 8.439286 CCCATTTTTGTGTATTAATCCGTTTTG 58.561 33.333 0.00 0.00 0.00 2.44
2289 3162 7.118535 GCCCATTTTTGTGTATTAATCCGTTTT 59.881 33.333 0.00 0.00 0.00 2.43
2290 3163 6.592220 GCCCATTTTTGTGTATTAATCCGTTT 59.408 34.615 0.00 0.00 0.00 3.60
2291 3164 6.103330 GCCCATTTTTGTGTATTAATCCGTT 58.897 36.000 0.00 0.00 0.00 4.44
2292 3165 5.394773 GGCCCATTTTTGTGTATTAATCCGT 60.395 40.000 0.00 0.00 0.00 4.69
2293 3166 5.047188 GGCCCATTTTTGTGTATTAATCCG 58.953 41.667 0.00 0.00 0.00 4.18
2294 3167 5.983540 TGGCCCATTTTTGTGTATTAATCC 58.016 37.500 0.00 0.00 0.00 3.01
2295 3168 8.397148 CAAATGGCCCATTTTTGTGTATTAATC 58.603 33.333 19.03 0.00 40.60 1.75
2296 3169 7.338957 CCAAATGGCCCATTTTTGTGTATTAAT 59.661 33.333 19.03 0.00 40.60 1.40
2297 3170 6.656693 CCAAATGGCCCATTTTTGTGTATTAA 59.343 34.615 19.03 0.00 40.60 1.40
2298 3171 6.176183 CCAAATGGCCCATTTTTGTGTATTA 58.824 36.000 19.03 0.00 40.60 0.98
2299 3172 5.008980 CCAAATGGCCCATTTTTGTGTATT 58.991 37.500 19.03 0.00 40.60 1.89
2300 3173 4.587891 CCAAATGGCCCATTTTTGTGTAT 58.412 39.130 19.03 0.00 40.60 2.29
2301 3174 4.013267 CCAAATGGCCCATTTTTGTGTA 57.987 40.909 19.03 0.00 40.60 2.90
2302 3175 2.861274 CCAAATGGCCCATTTTTGTGT 58.139 42.857 19.03 0.00 40.60 3.72
2315 3188 2.439409 TCTGTGACATGAGCCAAATGG 58.561 47.619 0.00 0.00 38.53 3.16
2316 3189 4.508461 TTTCTGTGACATGAGCCAAATG 57.492 40.909 0.00 0.00 0.00 2.32
2317 3190 4.768448 TCATTTCTGTGACATGAGCCAAAT 59.232 37.500 0.00 0.00 27.57 2.32
2318 3191 4.143543 TCATTTCTGTGACATGAGCCAAA 58.856 39.130 0.00 0.00 27.57 3.28
2319 3192 3.753815 TCATTTCTGTGACATGAGCCAA 58.246 40.909 0.00 0.00 27.57 4.52
2320 3193 3.421919 TCATTTCTGTGACATGAGCCA 57.578 42.857 0.00 0.00 27.57 4.75
2321 3194 3.119708 GGTTCATTTCTGTGACATGAGCC 60.120 47.826 11.69 11.69 40.73 4.70
2322 3195 3.503363 TGGTTCATTTCTGTGACATGAGC 59.497 43.478 0.00 3.17 31.68 4.26
2323 3196 5.892160 ATGGTTCATTTCTGTGACATGAG 57.108 39.130 0.00 0.00 31.68 2.90
2324 3197 5.047872 CCAATGGTTCATTTCTGTGACATGA 60.048 40.000 0.00 0.00 31.05 3.07
2325 3198 5.165676 CCAATGGTTCATTTCTGTGACATG 58.834 41.667 0.00 0.00 31.05 3.21
2326 3199 4.221262 CCCAATGGTTCATTTCTGTGACAT 59.779 41.667 0.00 0.00 31.05 3.06
2327 3200 3.573538 CCCAATGGTTCATTTCTGTGACA 59.426 43.478 0.00 0.00 31.05 3.58
2328 3201 3.614870 GCCCAATGGTTCATTTCTGTGAC 60.615 47.826 0.00 0.00 31.05 3.67
2329 3202 2.562298 GCCCAATGGTTCATTTCTGTGA 59.438 45.455 0.00 0.00 31.05 3.58
2330 3203 2.564062 AGCCCAATGGTTCATTTCTGTG 59.436 45.455 0.00 0.00 31.05 3.66
2331 3204 2.827921 GAGCCCAATGGTTCATTTCTGT 59.172 45.455 0.00 0.00 41.28 3.41
2332 3205 2.827322 TGAGCCCAATGGTTCATTTCTG 59.173 45.455 0.00 0.00 45.78 3.02
2333 3206 3.173953 TGAGCCCAATGGTTCATTTCT 57.826 42.857 0.00 0.00 45.78 2.52
2339 3212 3.132646 TGCATTTATGAGCCCAATGGTTC 59.867 43.478 0.00 0.00 41.94 3.62
2340 3213 3.106054 TGCATTTATGAGCCCAATGGTT 58.894 40.909 0.00 0.00 0.00 3.67
2341 3214 2.696707 CTGCATTTATGAGCCCAATGGT 59.303 45.455 0.00 0.00 0.00 3.55
2342 3215 2.547218 GCTGCATTTATGAGCCCAATGG 60.547 50.000 0.00 0.00 0.00 3.16
2343 3216 2.547218 GGCTGCATTTATGAGCCCAATG 60.547 50.000 16.09 0.00 41.28 2.82
2344 3217 1.690352 GGCTGCATTTATGAGCCCAAT 59.310 47.619 16.09 0.00 41.28 3.16
2345 3218 1.113788 GGCTGCATTTATGAGCCCAA 58.886 50.000 16.09 0.00 41.28 4.12
2346 3219 0.033306 TGGCTGCATTTATGAGCCCA 60.033 50.000 20.53 9.60 43.87 5.36
2347 3220 1.000506 CATGGCTGCATTTATGAGCCC 59.999 52.381 20.53 7.78 43.87 5.19
2348 3221 1.000506 CCATGGCTGCATTTATGAGCC 59.999 52.381 18.36 18.36 44.31 4.70
2349 3222 1.958579 TCCATGGCTGCATTTATGAGC 59.041 47.619 6.96 0.00 33.30 4.26
2350 3223 4.279922 TGATTCCATGGCTGCATTTATGAG 59.720 41.667 6.96 0.00 0.00 2.90
2351 3224 4.216708 TGATTCCATGGCTGCATTTATGA 58.783 39.130 6.96 0.00 0.00 2.15
2352 3225 4.594123 TGATTCCATGGCTGCATTTATG 57.406 40.909 6.96 0.45 0.00 1.90
2353 3226 5.617528 TTTGATTCCATGGCTGCATTTAT 57.382 34.783 6.96 0.00 0.00 1.40
2354 3227 5.417754 TTTTGATTCCATGGCTGCATTTA 57.582 34.783 6.96 0.00 0.00 1.40
2355 3228 3.985019 TTTGATTCCATGGCTGCATTT 57.015 38.095 6.96 0.00 0.00 2.32
2356 3229 3.985019 TTTTGATTCCATGGCTGCATT 57.015 38.095 6.96 0.00 0.00 3.56
2357 3230 3.985019 TTTTTGATTCCATGGCTGCAT 57.015 38.095 6.96 0.00 0.00 3.96
2380 3253 3.628942 GCATTTATGAGCCACATGACTCA 59.371 43.478 16.28 16.28 46.34 3.41
2381 3254 4.220533 GCATTTATGAGCCACATGACTC 57.779 45.455 0.00 3.92 39.77 3.36
2390 3263 0.038892 CATGGCGGCATTTATGAGCC 60.039 55.000 23.47 17.26 46.32 4.70
2391 3264 0.038892 CCATGGCGGCATTTATGAGC 60.039 55.000 23.47 0.00 34.00 4.26
2403 3276 0.527113 TCATTTTCACTGCCATGGCG 59.473 50.000 30.87 25.81 45.51 5.69
2404 3277 1.738030 GCTCATTTTCACTGCCATGGC 60.738 52.381 30.54 30.54 42.35 4.40
2405 3278 1.546923 TGCTCATTTTCACTGCCATGG 59.453 47.619 7.63 7.63 0.00 3.66
2406 3279 2.230508 AGTGCTCATTTTCACTGCCATG 59.769 45.455 0.00 0.00 41.53 3.66
2407 3280 2.522185 AGTGCTCATTTTCACTGCCAT 58.478 42.857 0.00 0.00 41.53 4.40
2408 3281 1.985473 AGTGCTCATTTTCACTGCCA 58.015 45.000 0.00 0.00 41.53 4.92
2409 3282 3.054878 CAAAGTGCTCATTTTCACTGCC 58.945 45.455 0.00 0.00 42.19 4.85
2410 3283 3.054878 CCAAAGTGCTCATTTTCACTGC 58.945 45.455 0.00 0.00 42.19 4.40
2411 3284 3.054878 GCCAAAGTGCTCATTTTCACTG 58.945 45.455 0.00 0.00 42.19 3.66
2412 3285 2.961062 AGCCAAAGTGCTCATTTTCACT 59.039 40.909 0.00 0.00 44.64 3.41
2413 3286 3.375782 AGCCAAAGTGCTCATTTTCAC 57.624 42.857 0.00 0.00 36.75 3.18
2439 3312 9.780186 GGGACTTATTTTAGTACTAATCATGCT 57.220 33.333 15.92 0.00 0.00 3.79
2440 3313 9.780186 AGGGACTTATTTTAGTACTAATCATGC 57.220 33.333 15.92 4.91 27.25 4.06
2461 3334 3.431415 AGGGTGCTTGAATTTAAGGGAC 58.569 45.455 11.53 4.39 0.00 4.46
2462 3335 3.333680 AGAGGGTGCTTGAATTTAAGGGA 59.666 43.478 11.53 0.00 0.00 4.20
2463 3336 3.701664 AGAGGGTGCTTGAATTTAAGGG 58.298 45.455 11.53 0.00 0.00 3.95
2464 3337 5.946377 ACTAAGAGGGTGCTTGAATTTAAGG 59.054 40.000 11.53 0.00 0.00 2.69
2465 3338 7.824779 ACTACTAAGAGGGTGCTTGAATTTAAG 59.175 37.037 5.63 5.63 0.00 1.85
2466 3339 7.606456 CACTACTAAGAGGGTGCTTGAATTTAA 59.394 37.037 0.00 0.00 0.00 1.52
2467 3340 7.103641 CACTACTAAGAGGGTGCTTGAATTTA 58.896 38.462 0.00 0.00 0.00 1.40
2468 3341 5.940470 CACTACTAAGAGGGTGCTTGAATTT 59.060 40.000 0.00 0.00 0.00 1.82
2469 3342 5.013183 ACACTACTAAGAGGGTGCTTGAATT 59.987 40.000 0.00 0.00 29.64 2.17
2470 3343 4.532521 ACACTACTAAGAGGGTGCTTGAAT 59.467 41.667 0.00 0.00 29.64 2.57
2471 3344 3.901844 ACACTACTAAGAGGGTGCTTGAA 59.098 43.478 0.00 0.00 29.64 2.69
2472 3345 3.507411 ACACTACTAAGAGGGTGCTTGA 58.493 45.455 0.00 0.00 29.64 3.02
2473 3346 3.963428 ACACTACTAAGAGGGTGCTTG 57.037 47.619 0.00 0.00 29.64 4.01
2474 3347 3.646637 ACAACACTACTAAGAGGGTGCTT 59.353 43.478 0.00 0.00 31.83 3.91
2475 3348 3.240302 ACAACACTACTAAGAGGGTGCT 58.760 45.455 0.00 0.00 31.83 4.40
2476 3349 3.679824 ACAACACTACTAAGAGGGTGC 57.320 47.619 0.00 0.00 31.83 5.01
2477 3350 6.092955 TGTAACAACACTACTAAGAGGGTG 57.907 41.667 0.00 0.00 31.83 4.61
2478 3351 6.269307 ACATGTAACAACACTACTAAGAGGGT 59.731 38.462 0.00 0.00 33.24 4.34
2479 3352 6.698380 ACATGTAACAACACTACTAAGAGGG 58.302 40.000 0.00 0.00 0.00 4.30
2480 3353 8.521176 ACTACATGTAACAACACTACTAAGAGG 58.479 37.037 7.06 0.00 0.00 3.69
2481 3354 9.909644 AACTACATGTAACAACACTACTAAGAG 57.090 33.333 7.06 0.00 0.00 2.85
2482 3355 9.687210 CAACTACATGTAACAACACTACTAAGA 57.313 33.333 7.06 0.00 0.00 2.10
2483 3356 9.472361 ACAACTACATGTAACAACACTACTAAG 57.528 33.333 7.06 0.00 0.00 2.18
2484 3357 9.467258 GACAACTACATGTAACAACACTACTAA 57.533 33.333 7.06 0.00 32.57 2.24
2485 3358 8.631797 TGACAACTACATGTAACAACACTACTA 58.368 33.333 7.06 0.00 32.57 1.82
2486 3359 7.437267 GTGACAACTACATGTAACAACACTACT 59.563 37.037 7.06 0.00 35.15 2.57
2487 3360 7.561556 GTGACAACTACATGTAACAACACTAC 58.438 38.462 7.06 0.00 35.15 2.73
2488 3361 6.418523 CGTGACAACTACATGTAACAACACTA 59.581 38.462 7.06 0.00 34.79 2.74
2489 3362 5.233476 CGTGACAACTACATGTAACAACACT 59.767 40.000 7.06 0.00 34.79 3.55
2490 3363 5.005971 ACGTGACAACTACATGTAACAACAC 59.994 40.000 7.06 11.80 34.79 3.32
2491 3364 5.110598 ACGTGACAACTACATGTAACAACA 58.889 37.500 7.06 1.81 34.79 3.33
2492 3365 5.232626 TGACGTGACAACTACATGTAACAAC 59.767 40.000 7.06 0.00 34.79 3.32
2493 3366 5.232626 GTGACGTGACAACTACATGTAACAA 59.767 40.000 7.06 0.00 38.08 2.83
2494 3367 4.741185 GTGACGTGACAACTACATGTAACA 59.259 41.667 7.06 0.49 38.08 2.41
2495 3368 5.246677 GTGACGTGACAACTACATGTAAC 57.753 43.478 7.06 0.15 37.57 2.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.